View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17798_high_14 (Length: 214)
Name: NF17798_high_14
Description: NF17798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17798_high_14 |
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Alignment Details
Target: chr4 (Bit Score: 176; Significance: 5e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 23 - 198
Target Start/End: Original strand, 1092586 - 1092761
Alignment:
| Q |
23 |
cagcagtcacaacctgcttttcagcaggcaaatacttgttctgcttgaattccatatctcctgtgatagaaagagaactatatcacaaacacttgcaaaa |
122 |
Q |
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| T |
1092586 |
cagcagtcacaacctgcttttcagcaggcaaatacttgttctgcttgaattccatatctcctgtgatagaaagagaactatatcacaaacacttgcaaaa |
1092685 |
T |
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| Q |
123 |
tgcaaaatctcaagacatcaactataaatattttagaacaccaaactcatacatttttctttgcattaagaattat |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1092686 |
tgcaaaatctcaagacatcaactataaatattttagaacaccaaactcatacatttttctttgcattaagaattat |
1092761 |
T |
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