View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17798_low_22 (Length: 227)
Name: NF17798_low_22
Description: NF17798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17798_low_22 |
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Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 19 - 218
Target Start/End: Complemental strand, 18686545 - 18686348
Alignment:
| Q |
19 |
gaagcaacccttttccttaatatattgactcaataaactacatgtttgagagaaagttgttttctccggtgacttcgccggtggtttgttgccggaaact |
118 |
Q |
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| T |
18686545 |
gaagcaacccttttccttaatatattgactcaataaactacatgtttgagagaaagttgttttctccggtgacttcgccggtggtttgttgccggaaact |
18686446 |
T |
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| Q |
119 |
tctgaatattccgatgaggtagacatagttgaagatgatgatattcaacagagagagaaaacaaagcgcgttgtaataagaatgaaagtgttgatgatgt |
218 |
Q |
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| T |
18686445 |
tctgaatattccgatgaggtagacatagttgaagatgatgatattca--agagagagaaaacaaagcgcgttgtaataagaatgaaagtgttgatgatgt |
18686348 |
T |
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