View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17799_low_12 (Length: 218)

Name: NF17799_low_12
Description: NF17799
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17799_low_12
NF17799_low_12
[»] chr3 (51 HSPs)
chr3 (86-181)||(47738288-47738383)
chr3 (86-180)||(36864827-36864921)
chr3 (79-180)||(40328001-40328102)
chr3 (86-181)||(24343726-24343821)
chr3 (86-164)||(33839712-33839790)
chr3 (86-178)||(42921302-42921394)
chr3 (15-180)||(3137209-3137368)
chr3 (86-181)||(26612923-26613018)
chr3 (87-182)||(37522231-37522325)
chr3 (89-180)||(41224414-41224504)
chr3 (87-181)||(2754897-2754990)
chr3 (82-180)||(6042050-6042147)
chr3 (87-181)||(30385578-30385671)
chr3 (87-180)||(3456242-3456334)
chr3 (87-180)||(22426140-22426232)
chr3 (87-180)||(33113972-33114064)
chr3 (87-180)||(34482683-34482775)
chr3 (87-180)||(37216848-37216940)
chr3 (114-179)||(46919099-46919164)
chr3 (87-179)||(8320378-8320469)
chr3 (86-178)||(33145889-33145980)
chr3 (87-182)||(3089597-3089691)
chr3 (89-180)||(8361834-8361924)
chr3 (89-180)||(9796824-9796914)
chr3 (87-181)||(19650694-19650787)
chr3 (87-180)||(3574321-3574413)
chr3 (15-63)||(30385122-30385170)
chr3 (15-63)||(47738216-47738264)
chr3 (82-180)||(48161079-48161176)
chr3 (15-63)||(3456175-3456223)
chr3 (15-63)||(3574432-3574480)
chr3 (15-63)||(41883129-41883177)
chr3 (15-63)||(48161016-48161064)
chr3 (16-63)||(19650805-19650852)
chr3 (103-176)||(3456068-3456141)
chr3 (15-63)||(8320489-8320538)
chr3 (103-164)||(8320572-8320633)
chr3 (103-164)||(30385027-30385088)
chr3 (103-176)||(37217041-37217114)
chr3 (103-176)||(48160909-48160982)
chr3 (15-63)||(2754828-2754876)
chr3 (15-63)||(3089528-3089576)
chr3 (15-63)||(11347379-11347427)
chr3 (15-63)||(22426250-22426298)
chr3 (15-63)||(33113904-33113952)
chr3 (15-55)||(34482824-34482864)
chr3 (15-63)||(37216959-37217007)
chr3 (15-63)||(37522164-37522212)
chr3 (15-63)||(40327936-40327984)
chr3 (15-63)||(42297465-42297513)
chr3 (116-164)||(47738121-47738169)
[»] chr7 (33 HSPs)
chr7 (86-183)||(4974527-4974623)
chr7 (82-185)||(42696256-42696359)
chr7 (86-188)||(20009885-20009987)
chr7 (87-181)||(24395149-24395242)
chr7 (89-180)||(15238564-15238654)
chr7 (87-181)||(30848747-30848840)
chr7 (89-179)||(37476876-37476965)
chr7 (87-185)||(45637889-45637986)
chr7 (87-180)||(35445575-35445667)
chr7 (87-180)||(48880722-48880814)
chr7 (87-181)||(35876422-35876515)
chr7 (87-180)||(3962156-3962248)
chr7 (87-180)||(15577642-15577734)
chr7 (86-171)||(29737321-29737406)
chr7 (87-180)||(34483016-34483108)
chr7 (87-180)||(15329452-15329544)
chr7 (99-180)||(25167651-25167731)
chr7 (87-180)||(42611989-42612081)
chr7 (15-63)||(25167756-25167804)
chr7 (15-63)||(48880833-48880881)
chr7 (89-180)||(18037157-18037247)
chr7 (105-152)||(20953109-20953156)
chr7 (103-176)||(37477068-37477141)
chr7 (15-63)||(3962090-3962138)
chr7 (15-63)||(24395083-24395131)
chr7 (115-181)||(36790270-36790336)
chr7 (103-176)||(4974723-4974796)
chr7 (103-176)||(42611815-42611888)
chr7 (103-176)||(45637716-45637789)
chr7 (108-176)||(15577843-15577911)
chr7 (15-63)||(18037089-18037137)
chr7 (15-63)||(20010004-20010052)
chr7 (15-63)||(45637823-45637871)
[»] chr5 (31 HSPs)
chr5 (86-180)||(12614532-12614626)
chr5 (87-183)||(8145551-8145646)
chr5 (89-180)||(22912852-22912942)
chr5 (87-181)||(38899519-38899613)
chr5 (89-180)||(17545477-17545567)
chr5 (87-181)||(33584123-33584216)
chr5 (87-180)||(4892380-4892472)
chr5 (87-180)||(25398416-25398508)
chr5 (87-180)||(37321588-37321680)
chr5 (87-181)||(6043306-6043399)
chr5 (87-180)||(3521802-3521894)
chr5 (87-180)||(14138845-14138937)
chr5 (87-185)||(2477814-2477911)
chr5 (87-177)||(12850980-12851069)
chr5 (15-63)||(4892313-4892361)
chr5 (15-63)||(6043417-6043465)
chr5 (15-63)||(11361037-11361085)
chr5 (15-63)||(12850912-12850960)
chr5 (15-63)||(25398349-25398397)
chr5 (15-63)||(31640846-31640894)
chr5 (15-63)||(33584235-33584283)
chr5 (167-202)||(10458506-10458541)
chr5 (103-176)||(12614721-12614794)
chr5 (15-63)||(2477747-2477795)
chr5 (15-63)||(3362889-3362937)
chr5 (87-179)||(3362957-3363048)
chr5 (15-63)||(37321699-37321747)
chr5 (130-163)||(27482044-27482077)
chr5 (15-63)||(4433913-4433961)
chr5 (146-178)||(12614479-12614511)
chr5 (15-63)||(14138779-14138827)
[»] chr8 (53 HSPs)
chr8 (15-178)||(20091598-20091755)
chr8 (86-178)||(34665558-34665649)
chr8 (86-178)||(37132477-37132569)
chr8 (87-182)||(3596834-3596928)
chr8 (114-177)||(3890412-3890475)
chr8 (87-181)||(10044526-10044619)
chr8 (87-185)||(14129037-14129134)
chr8 (87-181)||(17841644-17841737)
chr8 (87-185)||(26041903-26042000)
chr8 (87-180)||(1503638-1503730)
chr8 (91-180)||(31347571-31347659)
chr8 (87-180)||(37985851-37985943)
chr8 (87-180)||(40779924-40780016)
chr8 (87-178)||(24211169-24211259)
chr8 (86-181)||(30055693-30055787)
chr8 (87-180)||(1645759-1645851)
chr8 (87-180)||(6108028-6108120)
chr8 (87-180)||(15187738-15187830)
chr8 (79-180)||(30834850-30834951)
chr8 (89-180)||(7017653-7017743)
chr8 (87-181)||(25581033-25581126)
chr8 (87-181)||(42754836-42754929)
chr8 (87-180)||(32064924-32065016)
chr8 (15-63)||(6108139-6108187)
chr8 (15-63)||(17841756-17841804)
chr8 (15-63)||(24211459-24211507)
chr8 (15-63)||(32064856-32064904)
chr8 (89-180)||(7022159-7022249)
chr8 (17-63)||(38017047-38017093)
chr8 (86-152)||(41819590-41819656)
chr8 (86-139)||(27835288-27835341)
chr8 (15-63)||(1645871-1645919)
chr8 (15-63)||(3596947-3596995)
chr8 (15-63)||(25581145-25581193)
chr8 (15-63)||(26042019-26042067)
chr8 (15-63)||(35353152-35353200)
chr8 (15-63)||(37985961-37986009)
chr8 (87-178)||(38017110-38017201)
chr8 (15-63)||(40780035-40780083)
chr8 (114-181)||(24844654-24844721)
chr8 (87-169)||(39772608-39772689)
chr8 (103-164)||(7021994-7022055)
chr8 (103-176)||(15187564-15187637)
chr8 (103-176)||(24211541-24211614)
chr8 (103-176)||(32064749-32064822)
chr8 (103-176)||(32393862-32393935)
chr8 (103-176)||(34665386-34665459)
chr8 (87-164)||(35353219-35353295)
chr8 (103-176)||(37986043-37986116)
chr8 (15-63)||(8453945-8453993)
chr8 (15-63)||(27835359-27835407)
chr8 (15-63)||(41819684-41819732)
chr8 (15-63)||(42754948-42754996)
[»] chr1 (40 HSPs)
chr1 (89-181)||(32000060-32000151)
chr1 (89-180)||(33786426-33786516)
chr1 (87-179)||(40215166-40215257)
chr1 (90-180)||(20304925-20305014)
chr1 (87-181)||(25973585-25973678)
chr1 (103-185)||(33786623-33786704)
chr1 (87-180)||(3559795-3559887)
chr1 (87-180)||(6883665-6883757)
chr1 (89-178)||(40273888-40273976)
chr1 (87-180)||(51737683-51737775)
chr1 (87-182)||(37821627-37821721)
chr1 (87-178)||(44690818-44690909)
chr1 (87-180)||(18404626-18404718)
chr1 (87-180)||(19015582-19015674)
chr1 (87-180)||(25463854-25463946)
chr1 (87-180)||(36966503-36966595)
chr1 (87-180)||(41876237-41876329)
chr1 (15-180)||(27523050-27523209)
chr1 (87-180)||(44094875-44094967)
chr1 (15-63)||(6883598-6883646)
chr1 (15-63)||(19015515-19015563)
chr1 (15-63)||(25463787-25463835)
chr1 (15-63)||(40215099-40215147)
chr1 (87-182)||(9910084-9910178)
chr1 (108-179)||(52064373-52064444)
chr1 (103-176)||(3559621-3559694)
chr1 (114-183)||(19722891-19722959)
chr1 (15-63)||(36966614-36966662)
chr1 (15-63)||(37821740-37821788)
chr1 (15-63)||(41876348-41876396)
chr1 (15-63)||(44094809-44094857)
chr1 (15-63)||(44690935-44690983)
chr1 (103-176)||(16045786-16045859)
chr1 (103-176)||(19015408-19015481)
chr1 (103-176)||(36966696-36966769)
chr1 (103-176)||(37821822-37821895)
chr1 (103-176)||(40214992-40215065)
chr1 (103-176)||(40273706-40273779)
chr1 (15-63)||(51737616-51737664)
chr1 (15-63)||(52329380-52329427)
[»] chr6 (35 HSPs)
chr6 (15-180)||(23290876-23291038)
chr6 (86-180)||(28675325-28675418)
chr6 (88-180)||(29693624-29693716)
chr6 (86-181)||(2309217-2309311)
chr6 (86-180)||(17705264-17705356)
chr6 (89-178)||(11548386-11548474)
chr6 (87-180)||(17175816-17175908)
chr6 (87-180)||(33696875-33696967)
chr6 (87-182)||(18365367-18365461)
chr6 (87-182)||(18370631-18370725)
chr6 (87-181)||(33695120-33695213)
chr6 (15-63)||(9752151-9752199)
chr6 (87-178)||(6031537-6031627)
chr6 (103-176)||(18365561-18365634)
chr6 (103-176)||(18370825-18370898)
chr6 (14-63)||(18889549-18889598)
chr6 (87-180)||(32702383-32702475)
chr6 (15-63)||(17175927-17175975)
chr6 (15-63)||(33695233-33695281)
chr6 (15-63)||(33696807-33696855)
chr6 (114-179)||(34238883-34238947)
chr6 (125-181)||(2121003-2121059)
chr6 (15-63)||(6031647-6031695)
chr6 (15-63)||(25987041-25987089)
chr6 (15-63)||(28675259-28675307)
chr6 (15-63)||(29693549-29693597)
chr6 (101-181)||(582521-582602)
chr6 (87-152)||(18889466-18889531)
chr6 (103-176)||(33695315-33695388)
chr6 (103-176)||(33696700-33696773)
chr6 (15-63)||(2309329-2309377)
chr6 (15-63)||(6127387-6127435)
chr6 (15-63)||(17705371-17705419)
chr6 (15-63)||(18365479-18365527)
chr6 (15-63)||(18370743-18370791)
[»] chr4 (57 HSPs)
chr4 (15-180)||(31078614-31078773)
chr4 (86-180)||(37219808-37219902)
chr4 (86-180)||(42671845-42671939)
chr4 (87-180)||(21802115-21802207)
chr4 (87-180)||(53123209-53123301)
chr4 (87-178)||(9089048-9089138)
chr4 (89-180)||(10442582-10442672)
chr4 (87-181)||(36073527-36073620)
chr4 (87-180)||(2625015-2625107)
chr4 (87-180)||(22199437-22199529)
chr4 (87-180)||(33530479-33530571)
chr4 (87-180)||(46442022-46442114)
chr4 (86-178)||(17655607-17655699)
chr4 (114-181)||(25063368-25063435)
chr4 (86-180)||(11314046-11314140)
chr4 (87-181)||(44893604-44893697)
chr4 (87-185)||(50156369-50156465)
chr4 (89-178)||(24392854-24392942)
chr4 (87-180)||(44893008-44893100)
chr4 (88-180)||(47290245-47290336)
chr4 (87-170)||(23964269-23964351)
chr4 (87-181)||(36073255-36073349)
chr4 (86-180)||(37934736-37934830)
chr4 (87-180)||(7744907-7744999)
chr4 (87-180)||(36073129-36073221)
chr4 (87-180)||(49387682-49387774)
chr4 (15-63)||(7745018-7745066)
chr4 (15-63)||(9088981-9089029)
chr4 (15-63)||(30563320-30563368)
chr4 (15-63)||(47290177-47290225)
chr4 (15-63)||(50156484-50156532)
chr4 (15-62)||(10442696-10442743)
chr4 (87-180)||(4751625-4751717)
chr4 (15-60)||(17655541-17655586)
chr4 (103-176)||(33530676-33530749)
chr4 (15-63)||(22199372-22199419)
chr4 (15-63)||(24128350-24128398)
chr4 (15-63)||(36073058-36073106)
chr4 (15-63)||(36073461-36073509)
chr4 (15-63)||(46441955-46442003)
chr4 (15-63)||(49387794-49387842)
chr4 (15-63)||(53123142-53123190)
chr4 (87-178)||(24128417-24128507)
chr4 (103-176)||(2624841-2624914)
chr4 (103-176)||(10442777-10442850)
chr4 (103-176)||(22199265-22199338)
chr4 (103-176)||(24128243-24128316)
chr4 (103-176)||(31078807-31078880)
chr4 (103-176)||(49387876-49387949)
chr4 (15-63)||(2624948-2624996)
chr4 (15-63)||(4751557-4751605)
chr4 (15-63)||(23964371-23964419)
chr4 (15-63)||(24392778-24392826)
chr4 (15-63)||(37219736-37219784)
chr4 (86-179)||(44744609-44744698)
chr4 (15-63)||(44893119-44893167)
chr4 (15-63)||(44893537-44893585)
[»] scaffold0096 (3 HSPs)
scaffold0096 (87-185)||(41188-41285)
scaffold0096 (15-63)||(41122-41170)
scaffold0096 (103-176)||(41015-41088)
[»] scaffold0085 (2 HSPs)
scaffold0085 (87-181)||(48027-48120)
scaffold0085 (15-63)||(47961-48009)
[»] chr2 (33 HSPs)
chr2 (87-181)||(7475302-7475395)
chr2 (87-181)||(9293369-9293462)
chr2 (87-182)||(35160937-35161031)
chr2 (87-181)||(33380385-33380478)
chr2 (103-180)||(22592906-22592983)
chr2 (89-180)||(43331092-43331182)
chr2 (87-181)||(10662066-10662159)
chr2 (87-180)||(13355026-13355118)
chr2 (89-178)||(21393483-21393570)
chr2 (87-180)||(23267857-23267949)
chr2 (15-63)||(7475414-7475462)
chr2 (15-63)||(9293482-9293530)
chr2 (15-63)||(27847743-27847791)
chr2 (15-63)||(33380318-33380366)
chr2 (15-63)||(35160868-35160916)
chr2 (82-181)||(9723579-9723678)
chr2 (87-176)||(3989254-3989342)
chr2 (103-176)||(21936085-21936158)
chr2 (103-164)||(22591498-22591559)
chr2 (15-63)||(3989187-3989235)
chr2 (15-63)||(9723516-9723564)
chr2 (15-63)||(10661998-10662046)
chr2 (19-63)||(14941273-14941317)
chr2 (15-63)||(23267968-23268016)
chr2 (87-177)||(31174633-31174722)
chr2 (89-159)||(37335824-37335894)
chr2 (103-176)||(9293564-9293637)
chr2 (86-151)||(16767285-16767350)
chr2 (15-63)||(21936192-21936241)
chr2 (87-152)||(21936260-21936325)
chr2 (15-63)||(16767378-16767426)
chr2 (140-180)||(27847791-27847831)
chr2 (15-63)||(31174740-31174788)
[»] scaffold0228 (5 HSPs)
scaffold0228 (87-180)||(16162-16254)
scaffold0228 (87-180)||(26114-26206)
scaffold0228 (15-63)||(8513-8561)
scaffold0228 (15-63)||(16095-16143)
scaffold0228 (15-63)||(26047-26095)
[»] scaffold0204 (2 HSPs)
scaffold0204 (87-181)||(4574-4667)
scaffold0204 (15-63)||(4507-4555)
[»] scaffold0178 (2 HSPs)
scaffold0178 (87-182)||(11799-11893)
scaffold0178 (15-63)||(11732-11780)
[»] scaffold0471 (3 HSPs)
scaffold0471 (15-63)||(12953-13001)
scaffold0471 (87-178)||(13020-13110)
scaffold0471 (103-176)||(12846-12919)


Alignment Details
Target: chr3 (Bit Score: 64; Significance: 4e-28; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 47738288 - 47738383
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    |||||||||||| |||||||| |||||||||||||| |||||| ||||| |||||||||| |||||||||||||||||| |||||| |||||||||    
T  47738288 gttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcca 47738383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 86 - 180
Target Start/End: Complemental strand, 36864921 - 36864827
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    |||||||||||| |||||||| ||||| |||||||| || ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  36864921 gttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcattttcc 36864827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 79 - 180
Target Start/End: Original strand, 40328001 - 40328102
Alignment:
Q  79 atcaaaagttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    |||||| || ||||||| | |||||||| ||||| |||||||| || ||| ||||| |||||||||| |||||||||||||||||| |||||||||||||    
T  40328001 atcaaaggtaaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatttt 40328100  T
Q  179 cc 180  Q
    ||    
T  40328101 cc 40328102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 24343726 - 24343821
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    |||||||||| | |||||||| ||||| ||||||| ||  ||| ||||| ||||||||||||||||||||||||||||| |||||| |||||||||    
T  24343726 gttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttcca 24343821  T

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Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 164
Target Start/End: Original strand, 33839712 - 33839790
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttg 164  Q
    |||||||||||| |||||||||||||| |||||||| || ||| ||||| |||||||||| ||||||||||||||||||    
T  33839712 gttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttg 33839790  T

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Target: chr3; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 42921302 - 42921394
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    |||||||||||| |||||||||||||| ||||| || |||||| ||||| || ||| ||| |||||||||||||||||  |||||||||||||    
T  42921302 gttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T

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Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 3137368 - 3137209
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgtannnnnnnnnnnnnnnatcaaaagttaataaatgaaactgaaatttaaggat 114  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||               || |||  ||||||||||| |||||||| ||| | |    
T  3137368 aataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcttttttgt-----atgaaagattaataaatgagactgaaatctaaaggt 3137274  T
Q  115 gattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||| |||||| ||||| |||||| ||| || ||||||||||||||| |||||||||||||||    
T  3137273 gattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 3137209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 26612923 - 26613018
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    |||||||||||| |||||||| ||||| |||||||| |||||| | ||| |||||||||| || ||||||||||| ||| |||||| |||||||||    
T  26612923 gttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacattttcca 26613018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 37522231 - 37522325
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaa 182  Q
    ||||||||||| |||||||| ||| | ||||||||||||||| ||||| || ||| ||| || ||||||||||||||| |||||||||||||||||    
T  37522231 ttaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttccaa 37522325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 41224414 - 41224504
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||| | |||||||||||| |||||||| |||||| ||||| |||||| ||| ||||| |||||||||||| |||||||||||||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatatctagcattttcc 41224504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 2754897 - 2754990
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||||||| | |||||||| |||||| ||||| || ||||||| || ||||||| ||||||| ||||||||||||||||    
T  2754897 ttaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttctt-ataaaatgattcttgatatctagcattttcca 2754990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 82 - 180
Target Start/End: Original strand, 6042050 - 6042147
Alignment:
Q  82 aaaagttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    |||| ||||||||||| |||||||| ||| | |||||||| |||||| ||||| ||| |||||| || ||||||||||||||| |||||||||||||||    
T  6042050 aaaaattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 6042147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 30385578 - 30385671
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||||||| || ||||||||||||||| ||| ||||||||||||    
T  30385578 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatttagcattttcca 30385671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 3456242 - 3456334
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| |||||||| | || ||| ||||| |||||||||| || ||||||||||||||| |||||||||||||||    
T  3456242 ttaataaatgagactgaaatctaaagatgattagtgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 3456334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 22426232 - 22426140
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| |||   |||||||| |||||| ||||| |||||||||| || ||||||||||||||| |||||||||||||||    
T  22426232 ttaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 22426140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 33113972 - 33114064
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| | |||||| ||| | |||||||| |||||| ||||| |||||||||| || ||||||||||||||| |||||||||||||||    
T  33113972 ttaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 33114064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 34482775 - 34482683
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||| ||| || ||||||||||||||| |||||||||||||||    
T  34482775 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 34482683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 37216940 - 37216848
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| | |||| ||||| |||||||||| || ||||||||||||||| |||||||||||||||    
T  37216940 ttaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 37216848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 46919099 - 46919164
Alignment:
Q  114 tgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttc 179  Q
    |||||||| |||||| ||||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  46919099 tgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacattttc 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 8320469 - 8320378
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttc 179  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||||||| || ||||||||||| ||| ||||||||||||||    
T  8320469 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 33145889 - 33145980
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    |||||||||| | |||||||| ||||| |||||||| || ||| ||||| |||||||||| || ||||||||||||||| |||||||||||||    
T  33145889 gttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 3089597 - 3089691
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaa 182  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| ||  |||||| || ||||||||||||||| |||||||||||||||||    
T  3089597 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttctt-ataaaatcattcttgatatctagcattttccaa 3089691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 8361924 - 8361834
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||| |||||||| ||||| |||||||| || ||| ||||| |||||| ||| |||||||| ||||||||| |||||||||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaa-tcattcttgatatctagcattttcc 8361834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 9796914 - 9796824
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||| |||||||| ||||  |||||||| || ||| ||||| |||||||||| |||||||| ||||||||| |||||||||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgataaa-tcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 19650787 - 19650694
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||| | |||||||| || ||| ||||| ||| |||||| || ||||||||||||||| ||||||||||||||||    
T  19650787 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcca 19650694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 3574413 - 3574321
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||  | |||||||| || ||| ||||| ||| |||||| || ||||||||||||||| |||||||||||||||    
T  3574413 ttaataaatgagactgaaatctagaggtgattattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 3574321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 30385122 - 30385170
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  30385122 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 30385170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 47738216 - 47738264
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||||||  ||||||||||||||||| |||||||||||||    
T  47738216 aataaaatctcagcctgaccagaaatcatggggtggtgggtgttatgta 47738264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 180
Target Start/End: Original strand, 48161079 - 48161176
Alignment:
Q  82 aaaagttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    |||| ||||||||||| |||||||| ||| | |||||||| || ||| || || ||| || ||| || ||||||||||||||| |||||||||||||||    
T  48161079 aaaaattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttctt-ataaaatcattcttgatatctagcattttcc 48161176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 3456175 - 3456223
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| |||||||||||||| |||||||||||||    
T  3456175 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 3456223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 3574480 - 3574432
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||| | ||| |||||||||||||| |||||||||||||    
T  3574480 aataaaatctcagcttggccggaaatcatggggtggtgggtgttatgta 3574432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 41883177 - 41883129
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || || ||||||||||||||| |||||||||||||    
T  41883177 aataaaatctcagactggctagaaatcatggggtggtgggtgttatgta 41883129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 48161016 - 48161064
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||| ||||||||| |||||||||||||    
T  48161016 aataaaatctcagcctagccggaaaccatggggtggtgggtgttatgta 48161064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 19650852 - 19650805
Alignment:
Q  16 ataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| | ||| |||||||||||||| |||||||||||||    
T  19650852 ataaaatctcagcttggccggaaatcatggggtggtgggtgttatgta 19650805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 3456141 - 3456068
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||||||||| || ||  ||| ||||||||||| |||||| ||| |||||||    
T  3456141 aaatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3456068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 8320538 - 8320489
Alignment:
Q  15 aataaaatctcagccttgccagaaatcat-ggggtgatgggtgttatgta 63  Q
    |||||||||||||||| |||||||||||| |||||  |||||||||||||    
T  8320538 aataaaatctcagcctggccagaaatcatgggggtagtgggtgttatgta 8320489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 8320572 - 8320633
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttg 164  Q
    |||||||||| |||||||| |||||||||||| || ||  ||| ||||||||||| ||||||    
T  8320572 aaatttaagggtgattattttgccatatcattcttaaaattttcttgataaaatctttcttg 8320633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 30385088 - 30385027
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttg 164  Q
    |||| ||||| |||||||| |||||| |||||||||||  ||| ||||||||||| ||||||    
T  30385088 aaatataagggtgattattctgccatgtcatttttgaaattttcttgataaaatctttcttg 30385027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 37217041 - 37217114
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||||||||| |||||||| |||||| ||||| || ||  ||| ||||||||||| |||||| ||| |||||||    
T  37217041 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 37217114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 48160982 - 48160909
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||||||||| || ||  ||| ||||||||||| |||||| ||| |||||||    
T  48160982 aaatctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcatt 48160909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 2754828 - 2754876
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||||||  || |||||||||||||  |||||||||||||    
T  2754828 aataaaatctcagcctgaccggaaatcatggggtagtgggtgttatgta 2754876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 3089528 - 3089576
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||| | ||| |||||||||||||| |||||| ||||||    
T  3089528 aataaaatctcagcttggccggaaatcatggggtggtgggtgctatgta 3089576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 11347379 - 11347427
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||  | || ||||||||||||||| |||||||||||||    
T  11347379 aataaaatctcagagtggctagaaatcatggggtggtgggtgttatgta 11347427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 22426298 - 22426250
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||| |||| || ||| |||||||||||||| |||||||||||||    
T  22426298 aataaaatttcagtctggccggaaatcatggggtggtgggtgttatgta 22426250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 33113904 - 33113952
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||| |||| || ||| |||||||||||||| |||||||||||||    
T  33113904 aataaaatttcagtctggccggaaatcatggggtggtgggtgttatgta 33113952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 34482864 - 34482824
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggt 55  Q
    |||||||||||||||| ||| |||||||||||||| |||||    
T  34482864 aataaaatctcagcctggccggaaatcatggggtggtgggt 34482824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 37217007 - 37216959
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||||||   ||||||| ||||| |||||||||||||    
T  37217007 aataaaatctcagccttgctgaaaatcatagggtggtgggtgttatgta 37216959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 37522164 - 37522212
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||| ||| ||| ||||| |||||||| |||||||||||||    
T  37522164 aataaaatctcaacctggccggaaattatggggtggtgggtgttatgta 37522212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 40327936 - 40327984
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||| ||| ||| |||||||| ||||| |||||||||||||    
T  40327936 aataaaatctcaacctggccggaaatcatagggtggtgggtgttatgta 40327984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 42297465 - 42297513
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||||||  || |||||||||||||| ||| |||||||||    
T  42297465 aataaaatctcagcctgaccggaaatcatggggtggtggatgttatgta 42297513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 47738169 - 47738121
Alignment:
Q  116 attattatgccatatcatttttgaatcttttttgataaaatcattcttg 164  Q
    |||||| |||||||||||| |||||| ||| ||||||||||| ||||||    
T  47738169 attattctgccatatcattcttgaatatttcttgataaaatctttcttg 47738121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 1e-24; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 86 - 183
Target Start/End: Complemental strand, 4974623 - 4974527
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaaa 183  Q
    |||||||||||| |||||||| ||||| |||||||| |||||| ||||| ||||||||||||| ||||||||||||||| ||||||||||||| ||||    
T  4974623 gttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttttt-ataaaatcattcttgatatctagcattttacaaa 4974527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 42696256 - 42696359
Alignment:
Q  82 aaaagttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    |||||||||||||||| |||||||| ||||| |||||||| | |||| ||||| |||||| |||||||||||||||||| ||| |||||| ||||||||     
T  42696256 aaaagttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatatctaacattttcct 42696355  T
Q  182 aaaa 185  Q
    ||||    
T  42696356 aaaa 42696359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 20009987 - 20009885
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaaaaa 185  Q
    |||||||||||| ||| |||| |||| ||||||||| || ||| ||||| |||||||||||||||||||||||||| || |||||| |||||| ||||||    
T  20009987 gttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttttcaaaaa 20009888  T
Q  186 gaa 188  Q
    |||    
T  20009887 gaa 20009885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 24395149 - 24395242
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| ||||||||||||| ||||||||||||||| ||||||||||||||||    
T  24395149 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttttt-ataaaatcattcttgatatctagcattttcca 24395242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 15238564 - 15238654
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||| |||||||| |||||||||||||| || ||| ||||| || ||| ||||||||| |||||||||||| |||||||||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgat-aaatcattcttgatatctagcattttcc 15238654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 30848747 - 30848840
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||||||| | |||||||| |||||| ||||| |||||| |||| | |||||| |||||||| ||||||||||||||||    
T  30848747 ttaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaagcattcttgatatctagcattttcca 30848840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 37476965 - 37476876
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttc 179  Q
    ||||||||| |||||||| ||||| |||||||| |||||| ||||| || ||||||| |||||||| ||||||||| ||||||||||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgataaa-tcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 45637889 - 45637986
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaaaaa 185  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||||||| || ||||||||||||||  ||||||||||||||| ||||    
T  45637889 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcctaaaa 45637986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 35445575 - 35445667
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| || ||||||||| |||||| |||| | ||||||||||||||| |||||||||||||||    
T  35445575 ttaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaat-ttttcttataaaatcattcttgatatctagcattttcc 35445667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 48880814 - 48880722
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    |||||||||||||||||||| |||   |||||||| |||||| ||||| |||||| ||| || ||||||||||||||| |||||||||||||||    
T  48880814 ttaataaatgaaactgaaatctaaatgtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 48880722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 35876422 - 35876515
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||||||  || ||| || ||||||||||||||| ||||||||||||||||    
T  35876422 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttctt-ataaaatcattcttgatatctagcattttcca 35876515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 3962156 - 3962248
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| ||| || ||| || ||||||||||||||| |||||||||||||||    
T  3962156 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatatttctt-ataaaatcattcttgatatctagcattttcc 3962248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 15577734 - 15577642
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| || ||| ||||| ||| |||||| || ||||||||||||||| |||||||||||||||    
T  15577734 ttaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 15577642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 86 - 171
Target Start/End: Original strand, 29737321 - 29737406
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatcta 171  Q
    |||||||||||| |||||||| ||||| |||||||| || ||| | ||| || ||||||| |||||||||||||||||| ||||||    
T  29737321 gttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 34483016 - 34483108
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| | |||||| ||| | |||||||| |||||| ||||| |||||||||| || ||||||||||||||| |||||| ||||||||    
T  34483016 ttaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 15329452 - 15329544
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| |||   |||||||| |||||| ||||| |||||| ||| || ||||||||||||||  |||||||||||||||    
T  15329452 ttaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttctt-ataaaatcattctttatatctagcattttcc 15329544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 25167731 - 25167651
Alignment:
Q  99 actgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    |||||||| ||| | |||||||| |||||| ||||| |||||| ||| || ||||||||||||||| |||||||||||||||    
T  25167731 actgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 42611989 - 42612081
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||| | |||||||| ||| | |||||||| |||||| ||||| ||  |||||| || ||||||||||||||| |||||||||||||||    
T  42611989 ttaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttctt-ataaaatcattcttgatatctagcattttcc 42612081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 25167804 - 25167756
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| ||||||||||||||||||||||||||||    
T  25167804 aataaaatctcagtctggccggaaatcatggggtgatgggtgttatgta 25167756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 48880881 - 48880833
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  48880881 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 48880833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 18037157 - 18037247
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||  |||||||| ||||| |||||||| | |||| ||||| || ||||||| |||||||| ||||| ||| |||||||||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgataaa-tcattgttgatatctagcattttcc 18037247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 20953109 - 20953156
Alignment:
Q  105 atttaaggatgattattatgccatatcatttttgaatcttttttgata 152  Q
    |||||||| |||||||| |||||||||||| |||||||||||||||||    
T  20953109 atttaagggtgattattttgccatatcattcttgaatcttttttgata 20953156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 37477068 - 37477141
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    ||||||||||||||||||| |||||| ||||| || ||| ||| |||| |||||| |||||| ||| |||||||    
T  37477068 aaatttaaggatgattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcatt 37477141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 3962090 - 3962138
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||| | ||| |||||||||||||| |||||||||||||    
T  3962090 aataaaatctcagcttggccggaaatcatggggtggtgggtgttatgta 3962138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 24395083 - 24395131
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||| ||| ||| |||||||||||||| |||||||||||||    
T  24395083 aataaaatctcaacctggccggaaatcatggggtggtgggtgttatgta 24395131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 36790336 - 36790270
Alignment:
Q  115 gattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||| || ||| ||||| |||||||||| ||||||||| |||| ||| ||| ||||||||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcattttcca 36790270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 4974723 - 4974796
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||| ||||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 4974796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 42611888 - 42611815
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||| ||||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 42611815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 45637789 - 45637716
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||| ||||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 45637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 15577843 - 15577911
Alignment:
Q  108 taaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    ||||| |||||||| |||||| ||||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  15577843 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15577911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 18037089 - 18037137
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||| | |  |||||||||||||||||| |||||||||||||    
T  18037089 aataaaatctctgtcgggccagaaatcatggggtggtgggtgttatgta 18037137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 20010052 - 20010004
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||| ||| ||| ||||| ||||||| ||||||||||||||    
T  20010052 aataaaatctcaacctggccggaaattatggggttatgggtgttatgta 20010004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 45637823 - 45637871
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| |||||||||||||| ||| |||||||||    
T  45637823 aataaaatctcagtctggccggaaatcatggggtggtggatgttatgta 45637871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 9e-23; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 86 - 180
Target Start/End: Complemental strand, 12614626 - 12614532
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    |||||||||||| |||||||| ||| | |||||||| |||||| ||||| || ||||||||||||||||||||| |||| |||||||||||||||    
T  12614626 gttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcattttcc 12614532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 87 - 183
Target Start/End: Original strand, 8145551 - 8145646
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaaa 183  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||||||| || ||||||||||||||| ||||||||||||||||||    
T  8145551 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttccaaa 8145646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 22912942 - 22912852
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||| |||||||| ||||| |||||||| |||||| ||||| |||||||||| |||||||| ||||||||| |||||||||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaa-tcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 38899613 - 38899519
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||| | || ||||| |||||| ||||| |||||| |||||| ||||||||||||||| ||||||||||||||||    
T  38899613 ttaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatatctagcattttcca 38899519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 17545567 - 17545477
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||| |||||||| |||||||||||||| || ||| ||||| || ||| ||||||||| |||||||||||| |||||||||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgat-aaatcattcttgatatctagcattttcc 17545477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 33584216 - 33584123
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||| ||| || ||||||||||||||| ||||||||||||||||    
T  33584216 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcca 33584123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 4892380 - 4892472
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||| |||| | ||||||||||||||| |||||||||||||||    
T  4892380 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttcc 4892472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 25398416 - 25398508
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||| |||| | ||||||||||||||| |||||||||||||||    
T  25398416 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttgaat-ttttcttataaaatcattcttgatatctagcattttcc 25398508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 37321680 - 37321588
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||| ||| || ||||||||||||||| |||||||||||||||    
T  37321680 ttaataaatgagactgaaatctaaaggtgattattgtgccatttcattcttgaatatttctt-ataaaatcattcttgatatctagcattttcc 37321588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 6043399 - 6043306
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| || ||| ||| || ||||||||||||||| ||||||||||||||||    
T  6043399 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcca 6043306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 3521894 - 3521802
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| || ||| ||| || ||||||||||||||| |||||||||||||||    
T  3521894 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 3521802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 14138845 - 14138937
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| | |||||| ||| | |||||||| |||||| ||||| |||||||||| || ||||||||||||||  |||||||||||||||    
T  14138845 ttaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcc 14138937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 2477814 - 2477911
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaaaaa 185  Q
    ||||||||| | |||||||| ||| | |||| ||| |||||| ||||| ||  |||||| || ||||||||||||||| ||||||||||||||||||||    
T  2477814 ttaataaataagactgaaatctaaaggtgatcattgtgccatgtcattcttagatctttctt-ataaaatcattcttgatatctagcattttccaaaaa 2477911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 12850980 - 12851069
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattt 177  Q
    ||||||||||| |||||||| ||| | || ||||| |||||| ||||| |||||| ||| || ||||||||||||||| ||||||||||||    
T  12850980 ttaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 4892313 - 4892361
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  4892313 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 4892361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 6043465 - 6043417
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  6043465 aataaaatctcagcctggccggaaatcatggggtgttgggtgttatgta 6043417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 11361085 - 11361037
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  11361085 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 11361037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 12850912 - 12850960
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  12850912 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 12850960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 25398349 - 25398397
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  25398349 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 25398397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 31640894 - 31640846
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  31640894 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 31640846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 33584283 - 33584235
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  33584283 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 33584235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 10458506 - 10458541
Alignment:
Q  167 atctagcattttccaaaaagaatatctgccaagttc 202  Q
    ||||||||||||||||||||||||||||||||||||    
T  10458506 atctagcattttccaaaaagaatatctgccaagttc 10458541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 12614721 - 12614794
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| ||||||||||| ||| ||||| |||||||||| ||||||||||  |||||| ||| |||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcatt 12614794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 2477747 - 2477795
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||| ||||||| ||| |||||||||||||| |||||||||||||    
T  2477747 aataaaatttcagcctggccggaaatcatggggtggtgggtgttatgta 2477795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 3362889 - 3362937
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| |||||||||||||| |||||||||||||    
T  3362889 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 3362937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 3362957 - 3363048
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttc 179  Q
    ||||||||||| |||||||| ||| | || ||||| || ||| ||||| || ||| ||| || ||||||||||||||| ||||||||||||||    
T  3362957 ttaataaatgagactgaaatctaaaggtggttattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 37321747 - 37321699
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| |||||||||||||| |||||||||||||    
T  37321747 aataaaatctcagtctagccggaaatcatggggtggtgggtgttatgta 37321699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 27482044 - 27482077
Alignment:
Q  130 tcatttttgaatcttttttgataaaatcattctt 163  Q
    ||||| ||||||||||||||||||||||||||||    
T  27482044 tcattcttgaatcttttttgataaaatcattctt 27482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 4433961 - 4433913
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| ||||||||||| || |||||||||||||    
T  4433961 aataaaatctcagtctggccggaaatcatgggatggtgggtgttatgta 4433913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Original strand, 12614479 - 12614511
Alignment:
Q  146 tttgataaaatcattcttgctatctagcatttt 178  Q
    ||||||||||||||||||| |||||||||||||    
T  12614479 tttgataaaatcattcttgatatctagcatttt 12614511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 14138779 - 14138827
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||||||   | |||||||||||||| |||||||||||||    
T  14138779 aataaaatctcagcctgatcggaaatcatggggtggtgggtgttatgta 14138827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 3e-22; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 15 - 178
Target Start/End: Complemental strand, 20091755 - 20091598
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgtannnnnnnnnnnnnnnatcaaaagttaataaatgaaactgaaatttaaggat 114  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||               || ||| |||||||||||| |||||||| ||||| |    
T  20091755 aataaaatctcagcctagccggaaatcatggggtggtgggtgttatgtatttttttttt-----atgaaaggttaataaatgagactgaaatctaagggt 20091661  T
Q  115 gattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    ||||||| |||||| ||||| |||||||||| || ||||||||||||||| |||||||||||||    
T  20091660 gattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 34665558 - 34665649
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    |||||||||||| |||||||| ||||| |||||||| |||||| ||||| |||||||||| || ||||||||||||||| |||||||||||||    
T  34665558 gttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 34665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 86 - 178
Target Start/End: Complemental strand, 37132569 - 37132477
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    |||||||||| | |||||||| ||||| |||||||| || ||| |||||  ||||||||| |||||||||||||||||| |||||||||||||    
T  37132569 gttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 3596928 - 3596834
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaa 182  Q
    ||||||||||| |||||||| ||| | |||||||| |||||||||||| || ||| ||| || ||||||||||||||| |||||||||||||||||    
T  3596928 ttaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttctt-ataaaatcattcttgatatctagcattttccaa 3596834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 3890475 - 3890412
Alignment:
Q  114 tgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattt 177  Q
    |||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||||||||||    
T  3890475 tgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 10044526 - 10044619
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| | |||||| ||| | |||||||| |||||| ||||| |||||||||| || ||||||||||||||| ||||||||||||||||    
T  10044526 ttaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcca 10044619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 14129037 - 14129134
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaaaaa 185  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||| ||| || ||||||||||||||| |||||||||||||| |||||    
T  14129037 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttctt-ataaaatcattcttgatatctagcattttcaaaaaa 14129134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 17841737 - 17841644
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||| ||| || ||||||||||||||| ||||||||||||||||    
T  17841737 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcca 17841644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 26042000 - 26041903
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaaaaa 185  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||| ||| || ||||||||||||||| ||||||||||||||| ||||    
T  26042000 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcctaaaa 26041903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 1503730 - 1503638
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||| ||| || ||||||||||||||| |||||||||||||||    
T  1503730 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 1503638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 180
Target Start/End: Complemental strand, 31347659 - 31347571
Alignment:
Q  91 taaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||| |||||||| ||| | |||||||| |||||| ||||| |||||||||| |||||||| ||||||||| |||||||||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaa-tcattcttgatatctagcattttcc 31347571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 37985943 - 37985851
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||  |||||||| ||| | |||||||| |||||| ||||| |||||||||| || ||||||||||||||| |||||||||||||||    
T  37985943 ttaataaatgggactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 37985851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 40780016 - 40779924
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||| ||| || ||||||||||||||| |||||||||||||||    
T  40780016 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 40779924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 24211259 - 24211169
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| ||| |||||| || ||||||||||||||| |||||||||||||    
T  24211259 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 30055693 - 30055787
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    |||||||||||| ||| |||| ||||| |||||||| || ||| ||||| |||||||||| || ||||||||||||||  ||||||||||||||||    
T  30055693 gttaataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatatctagcattttcca 30055787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 1645851 - 1645759
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||  ||||| || ||||||||||||||| |||||||||||||||    
T  1645851 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggttctttctt-ataaaatcattcttgatatctagcattttcc 1645759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 6108120 - 6108028
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| || ||| ||||| |||||| ||| || ||||||||||||||| |||||||||||||||    
T  6108120 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 15187738 - 15187830
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| ||| || ||||| ||| |||||| || ||||||||||||||| |||||||||||||||    
T  15187738 ttaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 15187830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 30834951 - 30834850
Alignment:
Q  79 atcaaaagttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    |||||||||| | |||| | |||||||| ||||| || ||||| || ||| ||||| || ||||||| |||||||||||||||||| |||||| ||||||    
T  30834951 atcaaaagttgaaaaataacactgaaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcatttt 30834852  T
Q  179 cc 180  Q
    ||    
T  30834851 cc 30834850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 7017743 - 7017653
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||| |||||||| ||||||||||||||||   || ||||| || ||| ||| ||||| |||||||||||| |||||||||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgat-aaatcattcttgatatctagcattttcc 7017653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 25581126 - 25581033
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||| | |||||||| ||  || ||||| |||||| ||| || ||||||||||||||| ||||||||||||||||    
T  25581126 ttaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcca 25581033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 42754929 - 42754836
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||| | |||||||| | |||| ||||| || ||| ||| || ||||||||||||||| ||||||||||||||||    
T  42754929 ttaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcca 42754836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 32064924 - 32065016
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| || ||| ||||| || ||| ||| || ||||||||||||||| |||||||||||||||    
T  32064924 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 32065016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 6108187 - 6108139
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  6108187 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 6108139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 17841804 - 17841756
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  17841804 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 17841756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 24211507 - 24211459
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  24211507 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 24211459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 32064856 - 32064904
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  32064856 aataaaatctcagcctggccggaaatcatgggctgatgggtgttatgta 32064904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 7022159 - 7022249
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||| |||||||| |||||  ||||||| || | | ||||| |||||||||| |||||||| ||||| ||| |||||||||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaa-tcattgttgatatctagcattttcc 7022249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 38017047 - 38017093
Alignment:
Q  17 taaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||| ||| |||||||||||||| |||||||||||||    
T  38017047 taaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 38017093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 41819656 - 41819590
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgata 152  Q
    |||||||||||| |||||||| ||||| |||||||| || ||| ||||| |||||||||| ||||||    
T  41819656 gttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgata 41819590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 27835341 - 27835288
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttga 139  Q
    |||||||||||| | |||||| |||||||||||||| || ||||||||||||||    
T  27835341 gttaataaatgagattgaaatctaaggatgattattgtgtcatatcatttttga 27835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 1645919 - 1645871
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| | | |||||||||||||| |||||||||||||    
T  1645919 aataaaatctcagcctggtcggaaatcatggggtggtgggtgttatgta 1645871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 3596995 - 3596947
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||||||  || |||||||||||||| |||||||||||||    
T  3596995 aataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 3596947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 25581193 - 25581145
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||||||  || |||||||||||||| |||||||||||||    
T  25581193 aataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 25581145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 26042067 - 26042019
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||||||  || |||||||||||||| |||||||||||||    
T  26042067 aataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 26042019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 35353152 - 35353200
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| ||||||||| |||| |||||||||||||    
T  35353152 aataaaatctcagcctggccggaaatcatgaggtggtgggtgttatgta 35353200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 37986009 - 37985961
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| |||||||||||||| |||||||||||||    
T  37986009 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 37985961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 38017110 - 38017201
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatga-ttattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    ||||||||||| |||||||| ||| | | | ||||| || ||| ||||| |||||||||| || ||||||||||||||| |||||||||||||    
T  38017110 ttaataaatgagactgaaatctaaaggtaaattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 40780083 - 40780035
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| ||| |||||||||    
T  40780083 aataaaatctcagcctggccggaaatcatggggtggtggatgttatgta 40780035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 24844721 - 24844654
Alignment:
Q  114 tgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    |||||||| ||||||  |||| || ||||||| |||||||||||||| ||| |||||| |||||||||    
T  24844721 tgattattttgccatgccattcttaaatctttcttgataaaatcattattgatatctaacattttcca 24844654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 39772689 - 39772608
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatc 169  Q
    |||||||| ||||||||||| ||| | |||||||| || ||| ||||| ||| |||||| || ||||||||||||||| ||||    
T  39772689 ttaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 7022055 - 7021994
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttg 164  Q
    |||| ||||| |||||||| |||||||||||| |||||| ||| |||| |||||| ||||||    
T  7022055 aaatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttg 7021994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 15187637 - 15187564
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| | |||||| |||||||||||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  15187637 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15187564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 24211541 - 24211614
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||||||||| |||||||| ||||||  |||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  24211541 aaatttaagggtgattattctgccatgccattcttgaaattttcttgataaaatctttcttgatatatagcatt 24211614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 32064822 - 32064749
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||| ||||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 32064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 32393935 - 32393862
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||||||||| |||||||| |||||| ||||| || ||  ||| ||||||||||| |||||| ||| |||||||    
T  32393935 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 32393862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 34665459 - 34665386
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||| ||||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 34665386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 35353219 - 35353295
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttg 164  Q
    ||||||||||| | | |||||||| | |||||||| |||||| ||||| |||||| |||| | |||||||||||||||    
T  35353219 ttaataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttg 35353295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 37986043 - 37986116
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||| ||||| || ||  ||||||||||||||| |||||| ||| |||||||    
T  37986043 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 37986116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 8453945 - 8453993
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| ||||| |||| ||| |||||||||||||    
T  8453945 aataaaatctcagcctggccggaaattatggtgtggtgggtgttatgta 8453993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 27835407 - 27835359
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| | | ||||||||||| || |||||||||||||    
T  27835407 aataaaatctcagcctagacggaaatcatgggatggtgggtgttatgta 27835359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 41819732 - 41819684
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||  ||| |||||||||||||| || ||||||||||    
T  41819732 aataaaatctcagcccggccggaaatcatggggtggtgtgtgttatgta 41819684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 42754996 - 42754948
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| |||  |||||||||| || |||||||||||||    
T  42754996 aataaaatctcagcctggccgaaaatcatgggatggtgggtgttatgta 42754948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 1e-21; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 181
Target Start/End: Complemental strand, 32000151 - 32000060
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||| |||||||| ||||| |||||||| |||||| ||||| |||||||||| |||||||| ||||||||| ||||||||||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaa-tcattcttgatatctagcattttcca 32000060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 33786516 - 33786426
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||| |||||||| ||||| |||||||| |||||| ||||| |||||||||| |||||||| ||||||||| |||||||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaa-tcattcttgatatctagcattttcc 33786426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 40215166 - 40215257
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttc 179  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||||||| || ||||||||||||||| ||||||||||||||    
T  40215166 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 20305014 - 20304925
Alignment:
Q  90 ataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    |||||||| |||||||| ||| | |||||||| |||||| ||||| |||||||||| || ||||||||||||||| |||||||||||||||    
T  20305014 ataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 20304925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 25973585 - 25973678
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||||||| | |||||||| || ||| ||||| |||||| ||| || ||||||||||||||| ||||||||||||||||    
T  25973585 ttaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcca 25973678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 103 - 185
Target Start/End: Original strand, 33786623 - 33786704
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaaaaa 185  Q
    |||||||||| |||||||| |||||| ||||| |||||||||| |||||||| ||||||||| |||||||||||| |||||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgataaa-tcattcttgatatctagcatttcccaaaaa 33786704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 3559795 - 3559887
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| || ||||||||| ||| |||||| || ||||||||||||||| |||||||||||||||    
T  3559795 ttaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 6883665 - 6883757
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | ||| ||||||||||| ||||| |||||| |||| | ||||||||||||||| |||||||||||||||    
T  6883665 ttaataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttcc 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 40273888 - 40273976
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    ||||||||| |||||||| ||||| |||||||| |||||| ||||| |||||| ||| |||||||| ||||||||| |||||||||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaa-tcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 51737683 - 51737775
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||| |||| | ||||||||||||||| |||||||||||||||    
T  51737683 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttcc 51737775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 37821721 - 37821627
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaa 182  Q
    ||||||||||| |||||||| ||| | |||||||| || ||| ||||| |||||| ||| || ||||||||||||||| |||||||||||||||||    
T  37821721 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccaa 37821627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 44690909 - 44690818
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    ||||||||| | |||| ||| ||||| |||||||| |||||| ||||| |||||||||| |||||||||||||| ||| |||||| ||||||    
T  44690909 ttaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttt 44690818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 18404626 - 18404718
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| |||   |||||||| |||||| ||||| || ||||||| || ||||||||||||||| |||||||||||||||    
T  18404626 ttaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcattttcc 18404718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 19015582 - 19015674
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||| |||| | ||||||||||||||| ||| |||||||||||    
T  19015582 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatgtagcattttcc 19015674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 25463854 - 25463946
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| ||| |||| ||| | |||||||| |||||| ||||| ||| |||||| || ||||||||||||||| |||||||||||||||    
T  25463854 ttaataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 36966595 - 36966503
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| | ||| |||||| ||| || ||||||||||||||| |||||||||||||||    
T  36966595 ttaataaatgagactgaaatctaaaggtgattattgtgccatgttattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 36966503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 41876329 - 41876237
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| ||| || ||||| |||||| ||| || ||||||||||||||| |||||||||||||||    
T  41876329 ttaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 41876237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 27523209 - 27523050
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgtannnnnnnnnnnnnnnatcaaaagttaataaatgaaactgaaatttaaggat 114  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||||||||               || |||||||||||||| | ||| ||||  |||| |    
T  27523209 aataaaatctcatcctggccggaaatcatggggtgatgggtgttatgtattttttttt------atgaaaagttaataaataagactaaaatcaaagggt 27523116  T
Q  115 gattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||| | |||||||  ||| |||||||||| |||||||||||||||||| ||| || ||||||||    
T  27523115 gattaatctgccatacgattcttgaatctttcttgataaaatcattcttgatatataacattttcc 27523050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 44094875 - 44094967
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| || ||| ||||| ||| |||||| || ||||||| ||||||| |||||||||||||||    
T  44094875 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttctt-ataaaataattcttgatatctagcattttcc 44094967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 6883598 - 6883646
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  6883598 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 6883646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 19015515 - 19015563
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  19015515 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 19015563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 25463787 - 25463835
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  25463787 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 25463835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 40215099 - 40215147
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  40215099 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 40215147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 9910178 - 9910084
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaa 182  Q
    ||||||||| |  ||||||| ||| | |||||||| |||||| ||||| |||||| ||| || ||||||||||||||| |||||| ||||||||||    
T  9910178 ttaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctaacattttccaa 9910084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 179
Target Start/End: Complemental strand, 52064444 - 52064373
Alignment:
Q  108 taaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttc 179  Q
    ||||| ||| |||| || ||| ||||| |||||||||| |||||||||||||| ||| ||||||||||||||    
T  52064444 taagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 3559694 - 3559621
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||||||||| |||||||| |||||| ||||| || ||  ||||||||||||||| |||||| ||| |||||||    
T  3559694 aaatttaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 3559621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 183
Target Start/End: Complemental strand, 19722959 - 19722891
Alignment:
Q  114 tgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaaa 183  Q
    |||||||| || ||| ||||| |||||||||| || ||||||||||||||| |||||| |||||||||||    
T  19722959 tgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttccaaa 19722891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 36966662 - 36966614
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| |||||||||||||| |||||||||||||    
T  36966662 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 36966614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 37821788 - 37821740
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  37821788 aataaaatctcagcctggccgaaaatcatggggtgttgggtgttatgta 37821740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 41876396 - 41876348
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  41876396 aataaaatctcagcctggccgaaaatcatggggtggtgggtgttatgta 41876348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 44094809 - 44094857
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| |||||||||||||| |||||||||||||    
T  44094809 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 44094857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 44690983 - 44690935
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| |||||||||||||| |||||||||||||    
T  44690983 aataaaatctcagtctggccggaaatcatggggtgttgggtgttatgta 44690935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 16045786 - 16045859
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||| ||||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 19015481 - 19015408
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||||||||| |||||  ||| |||| |||||| |||||| ||| |||||||    
T  19015481 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 19015408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 36966696 - 36966769
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||||||||| |||||  ||| |||| |||||| |||||| ||| |||||||    
T  36966696 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36966769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 37821822 - 37821895
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||||||||| |||||  ||| |||| |||||| |||||| ||| |||||||    
T  37821822 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 37821895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 40215065 - 40214992
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||| ||||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 40214992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 40273779 - 40273706
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| || ||| ||||| |||||| ||| |||| |||||| |||||| |||||||||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 51737616 - 51737664
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||||||  ||  ||||||||||||| |||||||||||||    
T  51737616 aataaaatctcagcctgaccgaaaatcatggggtggtgggtgttatgta 51737664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 52329380 - 52329427
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| |||||||||||| ||||| | |||||||||||    
T  52329380 aataaaatctcagcctggccagaaatcat-gggtggtaggtgttatgta 52329427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 5e-21; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 23291038 - 23290876
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgtannnnnnnnnnnnnnnatcaaaagttaataaatgaaactgaaatttaaggat 114  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||               || |||  ||||||||||| |||||||| ||| | |    
T  23291038 aataaaatctcagcctggccagaaatcatggggtgatgggtgttatgtattttctttttttt--atgaaagattaataaatgagactgaaatctaaaggt 23290941  T
Q  115 gattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
     |||||| |||||||||||| |||||||||| || ||||||||||| ||| |||||||||||||||    
T  23290940 aattattgtgccatatcattcttgaatctttctt-ataaaatcatttttgatatctagcattttcc 23290876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 180
Target Start/End: Original strand, 28675325 - 28675418
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    |||||||||||| |||||||| ||||| |||||||| || ||| ||||| |||||||||| || ||||||||||||||| |||||||||||||||    
T  28675325 gttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 28675418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 29693624 - 29693716
Alignment:
Q  88 taataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    |||||||| | |||||||| ||||| | |||||| |||||| ||||| || ||||||| |||||||||||||||||| |||||||||||||||    
T  29693624 taataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcattttcc 29693716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 2309311 - 2309217
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    |||||||||||| |||||||| ||||| |||||||| |||||| ||||| |||||||||| || ||||||||||  ||| ||||||||||||||||    
T  2309311 gttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcatcgttgatatctagcattttcca 2309217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 180
Target Start/End: Complemental strand, 17705356 - 17705264
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    |||||||||||| |||||||| ||||| |||||||| || ||| ||||| |||||||||| || ||||||||||||||| |||||||||||||||    
T  17705356 gttaataaatgagactgaaatctaagg-tgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 17705264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 11548474 - 11548386
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    ||||||||| |||||||| ||||| |||||||| |||||| ||||| ||||||| || |||||||| ||||||||| |||||||||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaa-tcattcttgatatctagcatttt 11548386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 17175908 - 17175816
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| | |||| ||||| |||||||||| || ||||||||||||||| |||||||||||||||    
T  17175908 ttaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 33696875 - 33696967
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| || ||||||| || ||||||||||||||| |||||||||||||||    
T  33696875 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatatctagcattttcc 33696967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 18365461 - 18365367
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaa 182  Q
    ||||||||||| |||||||| ||| | |||||||| ||| || ||||| ||| |||||| || ||||||||||||||| |||||||||||||||||    
T  18365461 ttaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttccaa 18365367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 182
Target Start/End: Complemental strand, 18370725 - 18370631
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaa 182  Q
    ||||||||||| |||||||| ||| | |||||||| ||| || ||||| ||| |||||| || ||||||||||||||| |||||||||||||||||    
T  18370725 ttaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttccaa 18370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 33695213 - 33695120
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||| | |||||||| || ||||||||| || ||| ||| || ||||||||||||||| ||||||||||||||||    
T  33695213 ttaataaatgagactgaaatctaaaggtgattattgtgacatatcattcttaaatatttctt-ataaaatcattcttgatatctagcattttcca 33695120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 9752199 - 9752151
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  9752199 aataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta 9752151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 6031627 - 6031537
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| || |||||||||| ||||||||||||||| |||| || |||||    
T  6031627 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttttt-ataaaatcattcttgatatccagtatttt 6031537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 18365561 - 18365634
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||||||||| |||||||| |||||| ||||| |||||  ||||||||||||||| |||||| ||| |||||||    
T  18365561 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18365634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 18370825 - 18370898
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||||||||| |||||||| |||||| ||||| |||||  ||||||||||||||| |||||| ||| |||||||    
T  18370825 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18370898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 18889598 - 18889549
Alignment:
Q  14 gaataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  18889598 gaataaaatctcagccttgccggaaatcatggggtggtgggttttatgta 18889549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 32702383 - 32702475
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | | |||||| || ||| ||||| |||||| ||| || ||||||||||||||| |||||||||||||||    
T  32702383 ttaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 32702475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 17175975 - 17175927
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  17175975 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 17175927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 33695281 - 33695233
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  33695281 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 33695233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 33696807 - 33696855
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  33696807 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 33696855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 34238947 - 34238883
Alignment:
Q  114 tgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttc 179  Q
    |||||||| || ||| ||||| ||||||||| || |||||||||||||||| ||||||||||||||    
T  34238947 tgattattgtgtcatgtcattcttgaatcttctt-gataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 181
Target Start/End: Complemental strand, 2121059 - 2121003
Alignment:
Q  125 ccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    |||| ||||| ||||||||||||| ||||||||||| ||| |||||| |||||||||    
T  2121059 ccatgtcattcttgaatctttttttataaaatcatttttgatatctaacattttcca 2121003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 6031695 - 6031647
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||| |||||| ||| |||||||||||||| |||||||||||||    
T  6031695 aataaaatcccagcctggccggaaatcatggggtggtgggtgttatgta 6031647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 25987041 - 25987089
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| |||||||||||||| |||||||||||||    
T  25987041 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 25987089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 28675259 - 28675307
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||| ||||||||    
T  28675259 aataaaatctcagcctggccggaaatcatggggtggtgggggttatgta 28675307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 29693549 - 29693597
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| ||| |||||||||    
T  29693549 aataaaatctcagcctggccggaaatcatggggtggtggatgttatgta 29693597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 181
Target Start/End: Complemental strand, 582602 - 582521
Alignment:
Q  101 tgaaatttaaggatgattattatgcc-atatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    |||||| ||| | |||||||| |||| |||||||| || ||| ||| || ||||||||||||||| |||||| |||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttcca 582521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 152
Target Start/End: Complemental strand, 18889531 - 18889466
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgata 152  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| ||||||| || ||||||    
T  18889531 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcattcttgata 18889466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 33695315 - 33695388
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||| ||||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33695388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 33696773 - 33696700
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||| ||||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 2309377 - 2309329
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||| | ||| |||||||||||||  |||||||||||||    
T  2309377 aataaaatctcagcttggccggaaatcatggggttgtgggtgttatgta 2309329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 6127387 - 6127435
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||| ||||  | |||||||||||||||||| |||||||||||||    
T  6127387 aataaaatatcagtttggccagaaatcatggggtggtgggtgttatgta 6127435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 17705419 - 17705371
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| ||||||||||| || |||||||||||||    
T  17705419 aataaaatctcagtctggccggaaatcatgggatggtgggtgttatgta 17705371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 18365527 - 18365479
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||| ||| ||| |||||||||||||  |||||||||||||    
T  18365527 aataaaatctcatcctggccggaaatcatggggtagtgggtgttatgta 18365479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 18370791 - 18370743
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||| ||| ||| |||||||||||||  |||||||||||||    
T  18370791 aataaaatctcatcctggccggaaatcatggggtagtgggtgttatgta 18370743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 5e-21; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 31078773 - 31078614
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgtannnnnnnnnnnnnnnatcaaaagttaataaatgaaactgaaatttaaggat 114  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||               || |||  ||||||||||| | |||||| ||| |||    
T  31078773 aataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatctttttttt-----atgaaagattaataaatgagattgaaatctaaagat 31078679  T
Q  115 gattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||| |||||| ||||| |||||| |||||| ||||||||||||||| |||||||||||||||    
T  31078678 gattattgtgccatgtcattcttgaatttttttt-ataaaatcattcttgatatctagcattttcc 31078614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 180
Target Start/End: Original strand, 37219808 - 37219902
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    |||||||||| | | |||||| |||||||||||||| |||||| ||||| || ||||||| |||||||||||||||||| |||||| ||||||||    
T  37219808 gttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacattttcc 37219902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 180
Target Start/End: Original strand, 42671845 - 42671939
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||| |||||| ||| |||| |||| |||||||||||| ||| ||||| |||||||||| |||||||||||||||||| |||||| ||||||||    
T  42671845 gttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 21802207 - 21802115
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||||| |||||||| || ||| ||||| |||||||||| || ||||||||||||||| |||||||||||||||    
T  21802207 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 21802115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 53123209 - 53123301
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| |||||||||| |||||| ||||| |||||| |||| | ||||||||||||||| |||||||||||||||    
T  53123209 ttaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttcc 53123301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 9089048 - 9089138
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    ||||||||||| |||||||| ||| |||||||||| |||||| ||||| |||||| |||| | ||||||||||||||| |||||||||||||    
T  9089048 ttaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 10442672 - 10442582
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||||||| || ||||||||||||||| |||||||||||||||    
T  10442672 aataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcc 10442582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 36073527 - 36073620
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||| ||| || ||||||||||||||| ||||||||||||||||    
T  36073527 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcca 36073620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 2625015 - 2625107
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| ||| || |||||||||||||||| || ||||||||||||||| |||||| ||||||||    
T  2625015 ttaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaatctttctt-ataaaatcattcttgatatctaacattttcc 2625107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 22199437 - 22199529
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| ||| |||||| || ||||||||||||||| |||||||||||||||    
T  22199437 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 22199529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 33530571 - 33530479
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||| | |||||||| ||| | |||||||| |||||| ||||| ||| ||||||||| ||||||||||||||| |||||||||||||||    
T  33530571 ttaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttttt-ataaaatcattcttgatatctagcattttcc 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 46442022 - 46442114
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||| |||| | ||||||||||||||| |||||||||||||||    
T  46442022 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttcc 46442114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 17655607 - 17655699
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    |||||||||||| |||||||| ||| | | ||||||||| ||| ||||| || ||||||| |||||||||||||||||  |||||||||||||    
T  17655607 gttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 181
Target Start/End: Complemental strand, 25063435 - 25063368
Alignment:
Q  114 tgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    |||||||| | |||| ||||| |||||||||| |||||||||||||||||| ||||||||||||||||    
T  25063435 tgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcca 25063368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 180
Target Start/End: Complemental strand, 11314140 - 11314046
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    |||||||||| | |||  ||| ||||| |||||||| || ||| ||||| ||| |||||| |||||||||||||||||| |||||||||||||||    
T  11314140 gttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcc 11314046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 44893604 - 44893697
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| || ||| ||| || ||||||||||||||| ||||||||||||||||    
T  44893604 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcca 44893697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 50156465 - 50156369
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaaaaa 185  Q
    ||||||||||| |||||||| ||||| ||||||||||| ||| ||||| |||||| ||| || ||||||||||||||| |||||| |||||||| ||||    
T  50156465 ttaataaatgagactgaaatctaagg-tgattattatgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctaacattttcctaaaa 50156369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 24392854 - 24392942
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    ||||||||| |||||||| |||||||||||||| ||| || ||||| || ||| ||| ||||| |||||||||||| |||||||||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgat-aaatcattcttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 44893100 - 44893008
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| || ||| ||| || ||||||||||||||| |||||||||||||||    
T  44893100 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 44893008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 47290245 - 47290336
Alignment:
Q  88 taataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    |||||||||| |||||||| ||| | |||||||| | |||| ||||| |||||| ||| || ||||||||||||||| |||||||||||||||    
T  47290245 taataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 47290336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 23964351 - 23964269
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatct 170  Q
    ||||||||||| | |||||| ||| ||||||||||||||||| ||||| || ||||||| || ||||||||||||||| |||||    
T  23964351 ttaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttctt-ataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 36073349 - 36073255
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||| | |||||||| ||||  | |||||| || ||||||||| || ||||||| |||||||||||||| ||  ||||||||||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttcca 36073255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 180
Target Start/End: Complemental strand, 37934830 - 37934736
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    |||||||||||| | |||||| ||||| |||||||| || ||||||||| |||||||||| || ||||||||| || |  |||||| ||||||||    
T  37934830 gttaataaatgagattgaaatctaagggtgattattgtgtcatatcattattgaatctttcttaataaaatcagtcataatatctaacattttcc 37934736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 7744999 - 7744907
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| | |||||| ||| | |||||||| ||| || ||||| |||||||||| || ||||||||||||||| |||||| ||||||||    
T  7744999 ttaataaatgagattgaaatctaaaggtgattattgtgcaatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacattttcc 7744907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 36073129 - 36073221
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | || ||||| |||||| ||||| |||||| |||| | ||||||||||| ||| |||||||||||||||    
T  36073129 ttaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaat-ttttcttataaaatcatttttgatatctagcattttcc 36073221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 49387774 - 49387682
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||| |||| | |||||||||| |||| |||||| ||||||||    
T  49387774 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcatccttgatatctaacattttcc 49387682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 7745066 - 7745018
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  7745066 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 7745018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 9088981 - 9089029
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  9088981 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 9089029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 30563320 - 30563368
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  30563320 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 30563368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 47290177 - 47290225
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  47290177 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 47290225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 50156532 - 50156484
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  50156532 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 50156484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 62
Target Start/End: Complemental strand, 10442743 - 10442696
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgt 62  Q
    |||||||||||||||| ||| |||||||||||||| ||||||||||||    
T  10442743 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgt 10442696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 4751625 - 4751717
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | || ||||| |||||| ||||| || ||| ||| || ||||||| ||||||| |||||||||||||||    
T  4751625 ttaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttaaatttttctt-ataaaattattcttgatatctagcattttcc 4751717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 17655541 - 17655586
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttat 60  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||    
T  17655541 aataaaatctcagcctggccggaaatcatgggatgatgggtgttat 17655586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 33530676 - 33530749
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||| ||||| |||||| ||| ||||||||||| |||||| ||| |||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcatt 33530749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 22199372 - 22199419
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| |||||||||||| ||||| |||||||||||||    
T  22199372 aataaaatctcagcctggccagaaatcat-gggtggtgggtgttatgta 22199419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 24128350 - 24128398
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| ||| |||||||||    
T  24128350 aataaaatctcagcctggccggaaatcatggggtggtggatgttatgta 24128398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 36073058 - 36073106
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| |||||||||||||| |||||||||||||    
T  36073058 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 36073106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 36073461 - 36073509
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||||||  || |||||||||||||| |||||||||||||    
T  36073461 aataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgta 36073509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 46441955 - 46442003
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||| ||| ||| |||||||||||||| |||||||||||||    
T  46441955 aataaaatctcaacctggccggaaatcatggggtggtgggtgttatgta 46442003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 49387842 - 49387794
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| ||| |||||||||    
T  49387842 aataaaatctcagcctagccggaaatcatggggtggtggatgttatgta 49387794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 53123142 - 53123190
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| |||||||||||||| |||||||||||||    
T  53123142 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 53123190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 24128417 - 24128507
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    ||||||||||| |||||||| ||| | | |||||| || ||| ||||| || ||| ||| || ||||||||||||||| |||||||||||||    
T  24128417 ttaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 2624914 - 2624841
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||| ||||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  2624914 aaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcatt 2624841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 10442777 - 10442850
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||| ||||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 10442850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 22199338 - 22199265
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||| ||||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 22199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 24128316 - 24128243
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| |||||||||||||| |||||| ||||| |||||  ||| |||| |||||| |||||| ||| |||||||    
T  24128316 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 24128243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 31078807 - 31078880
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||| ||||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 31078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 49387876 - 49387949
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||| ||||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 49387949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 2624948 - 2624996
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| |||||||||| ||| |||||||||||||    
T  2624948 aataaaatctcagtctggccggaaatcatggagtggtgggtgttatgta 2624996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 4751557 - 4751605
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || | | |||||||||||||| |||||||||||||    
T  4751557 aataaaatctcagtctggtcggaaatcatggggtggtgggtgttatgta 4751605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 23964419 - 23964371
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||||||  || ||||||||| |||| |||||||||||||    
T  23964419 aataaaatctcagcctgaccggaaatcatgcggtggtgggtgttatgta 23964371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 24392778 - 24392826
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||| | |  ||| ||||||||||||||||||||||||||||    
T  24392778 aataaaatctctgtcgggccggaaatcatggggtgatgggtgttatgta 24392826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 37219736 - 37219784
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| |||||||| ||||||||| |||||||||    
T  37219736 aataaaatctcagtctggccggaaatcattgggtgatggatgttatgta 37219784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 44744609 - 44744698
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttc 179  Q
    |||||||||| | |||||||| ||||||| ||||||  | ||| ||||| |||||||||    |||||||||||| ||| |||||| |||||||    
T  44744609 gttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaatctt----gataaaatcatttttgatatctaacattttc 44744698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 44893167 - 44893119
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| |||  |||||||||| || |||||||||||||    
T  44893167 aataaaatctcagcctggccgaaaatcatgggatggtgggtgttatgta 44893119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 44893537 - 44893585
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| |||  |||||||||| || |||||||||||||    
T  44893537 aataaaatctcagcctggccgaaaatcatgggatggtgggtgttatgta 44893585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 41188 - 41285
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaaaaa 185  Q
    ||||||||||| |||||||| ||| | |||||||| | |||||||||| ||| |||||| || ||||||||||||||| ||||||||||||||||||||    
T  41188 ttaataaatgagactgaaatctaaaggtgattattgtaccatatcattcttggatctttctt-ataaaatcattcttgatatctagcattttccaaaaa 41285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 41122 - 41170
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  41122 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 41170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 41088 - 41015
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||| ||||| |||||  ||||||||||||||| |||||| ||| |||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 41015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 48027 - 48120
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||| |||||||||| ||| || ||||| |||||||||| || ||||||||||||||| ||||||||||||||||    
T  48027 ttaataaatgagactgaaatctaaagatgattattgtgctatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcca 48120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 47961 - 48009
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  47961 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 48009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 2e-20; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 7475395 - 7475302
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||| | ||||||||||| ||||||||| |||||| |||| | ||||||||||||||| ||||||||||||||||    
T  7475395 ttaataaatgagactgaaatctaaaggtgattattatgtcatatcattcttgaat-ttttcttataaaatcattcttgatatctagcattttcca 7475302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 9293462 - 9293369
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||||| |||||||| || ||| ||||| |||||||||| || ||||||||||||||| ||||||||||||||||    
T  9293462 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattttcca 9293369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 35160937 - 35161031
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaa 182  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||| ||| || ||||||||||||||| |||||||||||||||||    
T  35160937 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccaa 35161031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 33380385 - 33380478
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||| ||| || ||||||||||||||| ||||||||||||||||    
T  33380385 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcca 33380478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 180
Target Start/End: Original strand, 22592906 - 22592983
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    |||| ||||| |||||||| || ||| ||||| |||||||||| |||||||||||||||||| |||||||||||||||    
T  22592906 aaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 22592983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 43331092 - 43331182
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||| |||||||| ||| | |||||||| | |||| ||||| |||||||||| |||||||| ||||||||| |||||||||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgataaa-tcattcttgatatctagcattttcc 43331182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 10662066 - 10662159
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||| | |||||||| || ||| ||||| |||||| ||| || ||||||||||||||| ||||||||||||||||    
T  10662066 ttaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcca 10662159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 13355026 - 13355118
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| |||   |||||||| |||||| ||||| ||| |||||| || ||||||||||||||| |||||||||||||||    
T  13355026 ttaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatatctagcattttcc 13355118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    ||||||||| |||||||||||||| |||||||| || ||| ||||| |||||| ||| ||||| |||||||||||| |||||||||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaat-tttcttgat-aaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 23267949 - 23267857
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| || ||| ||| || ||||||||||||||| |||||||||||||||    
T  23267949 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcattttcc 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 7475462 - 7475414
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  7475462 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 7475414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 9293530 - 9293482
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  9293530 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 9293482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 27847743 - 27847791
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||||||  ||||||||||||||||| |||||||||||||    
T  27847743 aataaaatctcagcctgaccagaaatcatggggtggtgggtgttatgta 27847791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 33380318 - 33380366
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  33380318 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 33380366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 35160868 - 35160916
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| |||||||||||||    
T  35160868 aataaaatctcagcctggccggaaatcatggggtggtgggtgttatgta 35160916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 181
Target Start/End: Original strand, 9723579 - 9723678
Alignment:
Q  82 aaaagttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    |||||| ||||||| | |||||||| ||| | |||||||| || ||| ||||| || ||| ||| ||||| |||||||||||| |||||| |||||||||    
T  9723579 aaaagtgaataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattttcca 9723678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 3989254 - 3989342
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    ||||||||||| |||||||| ||| | | |||||| || ||| ||||| ||| |||||| || ||||||||||||||| |||||||||||    
T  3989254 ttaataaatgagactgaaatctaaaggttattattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 21936158 - 21936085
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||||||||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 21936085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 22591559 - 22591498
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttg 164  Q
    ||||||||||  ||||||| |||||||||||| |||||| |||||| |||||||| ||||||    
T  22591559 aaatttaagggggattattctgccatatcattcttgaattttttttaataaaatctttcttg 22591498  T

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Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 3989187 - 3989235
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| |||||||||||||| |||||||||||||    
T  3989187 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 3989235  T

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Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 9723516 - 9723564
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||||||  || |||||||||||||| |||||||||||||    
T  9723516 aataaaatctcagcctcaccggaaatcatggggtggtgggtgttatgta 9723564  T

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Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 10661998 - 10662046
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||| ||||| |||||||||||||    
T  10661998 aataaaatctcagcctggccggaaatcatagggtggtgggtgttatgta 10662046  T

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Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 14941317 - 14941273
Alignment:
Q  19 aaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||| ||||||||||||| |||| |||||||||||||    
T  14941317 aaatctcagcctggccagaaatcatgaggtggtgggtgttatgta 14941273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 23268016 - 23267968
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| |||||||||||||| |||||||||||||    
T  23268016 aataaaatctcagtctggccggaaatcatggggtggtgggtgttatgta 23267968  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 177
Target Start/End: Complemental strand, 31174722 - 31174633
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattt 177  Q
    ||||||||||| | |||||| ||| |  | ||||| || ||| ||||| |||||||||| || ||||||||||||||| ||||||||||||    
T  31174722 ttaataaatgagattgaaatctaaaggagtttattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctagcattt 31174633  T

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Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  89 aataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcat 159  Q
    ||||||||| |||||||| ||||| |||||| | || ||| ||||| || ||||||| |||||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 9293564 - 9293637
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| ||||| |||||||| |||||| ||||| |||||  ||| ||||||||||| |||||| ||| |||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcatt 9293637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 16767350 - 16767285
Alignment:
Q  86 gttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgat 151  Q
    |||||||||||| |||||||| ||||  |||||||| || ||| ||||| |||||||||| |||||    
T  16767350 gttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttcttgat 16767285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 21936192 - 21936241
Alignment:
Q  15 aataaaatctc-agccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||| ||||| ||| |||||||||||||| |||||||||||||    
T  21936192 aataaaatctctagcctggccggaaatcatggggtggtgggtgttatgta 21936241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 152
Target Start/End: Original strand, 21936260 - 21936325
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgata 152  Q
    |||||||||||||||||||| ||| | |||||||| |||||| ||||| ||| ||| || ||||||    
T  21936260 ttaataaatgaaactgaaatctaaaggtgattattgtgccatgtcattcttggatcattcttgata 21936325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 16767426 - 16767378
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| |||||||| ||||| |||||||||||||    
T  16767426 aataaaatctcagtctggccggaaatcatagggtggtgggtgttatgta 16767378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 27847791 - 27847831
Alignment:
Q  140 atcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    |||||| |||||||||| ||||||| |||||||||||||||    
T  27847791 atctttcttgataaaattattcttgatatctagcattttcc 27847831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 31174788 - 31174740
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| ||  || |||||||||||||| |||||||||||||    
T  31174788 aataaaatctcagtctgaccggaaatcatggggtggtgggtgttatgta 31174740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 50; Significance: 9e-20; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 16162 - 16254
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| |||||||||| |||||| ||||| |||||| |||| | ||||||||||||||| |||||||||||||||    
T  16162 ttaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttcc 16254  T

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Target: scaffold0228; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Original strand, 26114 - 26206
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcc 180  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| |||||| |||| | ||||||||||||||| |||||||||||||||    
T  26114 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttcc 26206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 8513 - 8561
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| ||||||||||| || |||||||||||||    
T  8513 aataaaatctcaggctggccggaaatcatgggatggtgggtgttatgta 8561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 16095 - 16143
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| ||||||||||| || |||||||||||||    
T  16095 aataaaatctcaggctggccggaaatcatgggatggtgggtgttatgta 16143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 26047 - 26095
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    ||||||||||||| || ||| ||||||||||| || |||||||||||||    
T  26047 aataaaatctcaggctggccggaaatcatgggatggtgggtgttatgta 26095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 4574 - 4667
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttcca 181  Q
    ||||||||||| |||||||| ||| | |||||||| |||||||||||| || ||| |||| | ||||||||||||||| ||||||||||||||||    
T  4574 ttaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaat-ttttcttataaaatcattcttgatatctagcattttcca 4667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 4507 - 4555
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| |||  ||||||||||||| |||||||||||||    
T  4507 aataaaatctcagcctggccgaaaatcatggggtggtgggtgttatgta 4555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 11799 - 11893
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcattttccaa 182  Q
    ||||||||||| |||||||| ||| | |||||||| |||||| ||||| || ||| ||| || ||||||||||||||| |||||| ||||||||||    
T  11799 ttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacattttccaa 11893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 11732 - 11780
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| |||  ||||||||||||| || ||||||||||    
T  11732 aataaaatctcagcctggccgaaaatcatggggtggtgagtgttatgta 11780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 12953 - 13001
Alignment:
Q  15 aataaaatctcagccttgccagaaatcatggggtgatgggtgttatgta 63  Q
    |||||||||||||||| ||| |||||||||||||| ||| |||||||||    
T  12953 aataaaatctcagcctggccggaaatcatggggtggtggatgttatgta 13001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 13020 - 13110
Alignment:
Q  87 ttaataaatgaaactgaaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatttt 178  Q
    ||||||||||| |||||||| ||| | | |||||| || ||| ||||| || ||| ||| || ||||||||||||||| |||||||||||||    
T  13020 ttaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatatctagcatttt 13110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 12919 - 12846
Alignment:
Q  103 aaatttaaggatgattattatgccatatcatttttgaatcttttttgataaaatcattcttgctatctagcatt 176  Q
    |||| |||||||||||||| |||||| ||||| |||||  ||| |||| |||||| |||||| ||| |||||||    
T  12919 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 12846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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