View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17799_low_8 (Length: 287)
Name: NF17799_low_8
Description: NF17799
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17799_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 13 - 271
Target Start/End: Original strand, 30907018 - 30907276
Alignment:
| Q |
13 |
aatatacctcgagagtttgcacacacaatcaatcatctttcaacatcaatagttggaccaacactactaactccaacaaactttggtagcactcatatta |
112 |
Q |
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|||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
30907018 |
aatatacctcgagagtttgcacacacaaccaatcatctttcgacatcaatagttagaccaacactactaactccaataaactttggtagcactcatatta |
30907117 |
T |
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| Q |
113 |
ccgaaatttattcttcaaacaccactgaccaccttccactcccccatttcctaaataacatagttcatttgctctgaccactcgaatggccttggaaaag |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
30907118 |
ccgaaatttattcttcaaacaccactgaccaccttccactcccccatttcctaaataacatagttcatttgctcttaccactcgaatggccttggaaaag |
30907217 |
T |
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| Q |
213 |
nnnnnnncgtagggaaatcaccacaccatacatcatacctaaaccgagttcctccccat |
271 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30907218 |
tttttttcgtagggaaatcaccacaccatacatcatacctaaaccgagttcctccccat |
30907276 |
T |
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