View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17805_low_24 (Length: 262)
Name: NF17805_low_24
Description: NF17805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17805_low_24 |
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Alignment Details
Target: chr8 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 13 - 172
Target Start/End: Original strand, 38056182 - 38056343
Alignment:
| Q |
13 |
aatatcactgttgttaggtaagctaccaaaataatacaggattacatgagaaatttt--gtcttgtttgacaaaaggcgcaaaatcggatatgctaatat |
110 |
Q |
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| T |
38056182 |
aatatcactgttgttaggtaagctaccaaaataatacaggattacatgagaaaattttcgtcttgtttgacaaaaggcgcaaaatcggatatgctaatat |
38056281 |
T |
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| Q |
111 |
cataatattaacatttaaagnnnnnnntcagatatgctaacattgtttttgactaaatatgc |
172 |
Q |
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| T |
38056282 |
cataatattaacatttaaagaaaaaaatcagatatgctaacattgtttttgactaaatatgc |
38056343 |
T |
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