View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17807_low_1 (Length: 518)
Name: NF17807_low_1
Description: NF17807
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17807_low_1 |
 | |
|
| [»] scaffold0288 (2 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 340; Significance: 0; HSPs: 50)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 18 - 402
Target Start/End: Original strand, 4560544 - 4560926
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcagga |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
4560544 |
agttcatgtatgaacaacctccaggtctcgtgtacacctccgcctttttcttcagctccatggccttttgcctcatct---tctttcctttatctcagga |
4560640 |
T |
|
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4560641 |
catcaattcattgaccagtttctccacgtcctccctctttacatttgtatcaatttcgtttccaatcttccattcattgcaaatatatcttcagtttgct |
4560740 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4560741 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
4560840 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttctttcaaaaatcagatgagaaaa |
402 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4560841 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaatcagatgagaaaa |
4560926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 24 - 402
Target Start/End: Original strand, 4574352 - 4574729
Alignment:
| Q |
24 |
tgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcaggacatcaa |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||| ||| ||||||||||||||| ||||||||| |
|
|
| T |
4574352 |
tgtatgaacaacctccaggtctcgtgtccacctccaccttcttcttcagctcaatggctttttgcctcatct---tctttcctttatctccggacatcaa |
4574448 |
T |
|
| Q |
123 |
ttcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgctggctga |
222 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4574449 |
ttcattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctga |
4574548 |
T |
|
| Q |
223 |
tctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgatgggt |
322 |
Q |
| |
|
|| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
4574549 |
tccgaaaaaaatggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggt |
4574648 |
T |
|
| Q |
323 |
ggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttctttc-aaaaatcagatgagaaaa |
402 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
4574649 |
ggttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaa |
4574729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 18 - 402
Target Start/End: Original strand, 4563749 - 4564132
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcagga |
116 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||| | || ||||||| ||| || |||||||||| | ||| |||||||||| |||| || |
|
|
| T |
4563749 |
agttcatgtatgaacaacctccagctctcgtgttttcctccactttcttcttcaactcaattgccttttgccgcatct---tctttcctttctctcctga |
4563845 |
T |
|
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
||||||||||||||| ||||||||||| || || ||||||||||| |||||||||| | ||||||| |||||||||| ||||| ||| ||||||| | |
|
|
| T |
4563846 |
catcaattcattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
4563945 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | || |
|
|
| T |
4563946 |
ggctgatcaccaaagaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccgccaattg |
4564045 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttctttca-aaaatcagatgagaaaa |
402 |
Q |
| |
|
| |||||||||||||||||||| ||||||||||||||||| |||| ||||||||| ||||||| |||| ||| |||||||| |||| |
|
|
| T |
4564046 |
aagggtggttcaatactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgacaaaa |
4564132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 18 - 387
Target Start/End: Original strand, 4480731 - 4481098
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcagga |
116 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||| |||| || | ||||||| |||||||||||||||| || ||| |||||||||| |||| |
|
|
| T |
4480731 |
agttcatgtatgaacaaccaccaggtcttgtgtcctcctctgccatcttcttcaactccatggccttttgcttcatct---tctttcctttctctcccac |
4480827 |
T |
|
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
|| ||||||||||| | ||||||| || || ||||| ||||| |||||||||| | |||||||| |||||||||||||||| ||| | ||| | | |
|
|
| T |
4480828 |
caacaattcattgattaacctctccacatcttctctcttcacattggtatcgatttcgagtccaatctcccattcattgcaaataattctacggttaggt |
4480927 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| || |
|
|
| T |
4480928 |
ggctgatcggcaaagaatggccaacacaacattggcactccagcacatacactttcagtggttgagttccatccgcaatgagtcaagaatccgccgattg |
4481027 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttctttcaaa |
387 |
Q |
| |
|
| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| | |||||||||||||| |
|
|
| T |
4481028 |
aagggtggttcaaaactttctcttgtggacaccaacttgctattaggcctctatttgaaatttctttcaaa |
4481098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 65 - 380
Target Start/End: Original strand, 4601874 - 4602187
Alignment:
| Q |
65 |
ttcttcagctccatggccttttgcctc-tctaattctttcctttatctcaggacatcaattcattgaccagtttctccacttcctccctctttacatttg |
163 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| |||| |||||||||| || |||| |||||||| ||| ||| ||| ||||| ||||| ||||||| |
|
|
| T |
4601874 |
ttcttcaactccatggccttttgcctcatct---tcttgcctttatctccggctatcacttcattgatcagcttcgccaactcctctctcttcacatttg |
4601970 |
T |
|
| Q |
164 |
tatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgctggctgatctgcaaaaaatggccaacacaacattggaactccagcaca |
263 |
Q |
| |
|
||||||||| | ||||||| ||||||||| |||||| |||| ||||||| ||||||||| |||||||| |||||||||||||| || ||||||||||| |
|
|
| T |
4601971 |
tatcgatttccataccaatctcccattcattacaaataaatctacagtttgttggctgatcggcaaaaaaaggccaacacaacatcggcactccagcaca |
4602070 |
T |
|
| Q |
264 |
tatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgatgggtggttcaatactttctcttgtggacaccaacttgctattagt |
363 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||| |||| || ||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4602071 |
tatgctttcagtggttgagttccatccacaatgagtcaagaatccgccgatcgaagggtggttcaacactttctcttgtggacaccaacttgctattagg |
4602170 |
T |
|
| Q |
364 |
cctctatcttaaatttc |
380 |
Q |
| |
|
||||||||| ||||||| |
|
|
| T |
4602171 |
cctctatctgaaatttc |
4602187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 18 - 402
Target Start/End: Original strand, 4617060 - 4617443
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctctctaattctttcctttatctcaggac |
117 |
Q |
| |
|
||||||||||||||||||| || ||||| |||| | |||| |||| ||||||| |||||||||||||||| || | |||||||||||||||| || |
|
|
| T |
4617060 |
agttcatgtatgaacaaccacctggtctagtgttctcctctgccttcttcttcaactccatggccttttgcttcatt--ttctttcctttatctccggct |
4617157 |
T |
|
| Q |
118 |
atcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgctg |
217 |
Q |
| |
|
|||| |||||||| ||| || ||| ||||| ||||| ||||| |||||||||| | ||||||| ||||||||| |||||| |||| |||| || || |
|
|
| T |
4617158 |
atcacttcattgatcagctttgccaactcctctctcttcacattcgtatcgatttccataccaatctcccattcattacaaataaatctacagtctgttg |
4617257 |
T |
|
| Q |
218 |
gctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactga |
317 |
Q |
| |
|
|||| || |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||| ||| |
|
|
| T |
4617258 |
gctggtcggcaaaaaatggccaacacaacattggcactccagcgcatatactttcagtggttgaattccatccgcaatgagtcaagaatcctccgattga |
4617357 |
T |
|
| Q |
318 |
tgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttc-tttcaaaaatcagatgagaaaa |
402 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| |||||| ||| ||| ||||||||||||| |
|
|
| T |
4617358 |
agggtggttcaacactttgtcttgtggacaccaacttgctattaggcctctatctgcaatttcatttgtaaactcagatgagaaaa |
4617443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 18 - 385
Target Start/End: Complemental strand, 4613812 - 4613447
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctctctaattctttcctttatctcaggac |
117 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||| |||| |||| ||||||| ||| || |||||||||||| | ||||||||||| |||| | |
|
|
| T |
4613812 |
agttcatatatgaacaacctcctggtctcgtgtcctcctctgccttcttcttcaactcaattgccttttgcctcatt--ttctttcctttctctcccacc |
4613715 |
T |
|
| Q |
118 |
atcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgctg |
217 |
Q |
| |
|
||||||||||||||||| ||||| || || || ||||| ||||| || || |||| | ||||| | |||||||||||| |||||||| |||||||||| |
|
|
| T |
4613714 |
atcaattcattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgctg |
4613615 |
T |
|
| Q |
218 |
gctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactga |
317 |
Q |
| |
|
||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | ||| |
|
|
| T |
4613614 |
gctgatccgcgaaaaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccgccaattga |
4613515 |
T |
|
| Q |
318 |
tgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttctttca |
385 |
Q |
| |
|
|||||||| ||||||| |||||| |||||||| || || ||||| ||||||||| ||||||| |||| |
|
|
| T |
4613514 |
agggtggtttaatacttgctcttgaggacaccagctcgcgattaggcctctatctgaaatttcattca |
4613447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 117 - 402
Target Start/End: Complemental strand, 4267163 - 4266877
Alignment:
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
||||||||||||||| | ||||| || || || ||||| |||||||||| ||||| | |||||||| |||||||| ||||||| |||| ||||||| | |
|
|
| T |
4267163 |
catcaattcattgactaacttctcgacgtcatctctcttcacatttgtattgatttcgagtccaatctcccattcatagcaaataaatctacagtttgtt |
4267064 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | | |
|
|
| T |
4267063 |
ggctgatcaccaaagaatggccaacacaacattggcactccagcacatatgctttcagtggttgaattccatccgcaatgagtcaagaatccaccaatcg |
4266964 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttcttt-caaaaatcagatgagaaaa |
402 |
Q |
| |
|
| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||| |
|
|
| T |
4266963 |
aagggtggttcaacactttatcttgtggacaccaacttgctattagtcctctatctgaaatttctttaaaaaaatcagatgacaaaa |
4266877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 18 - 385
Target Start/End: Original strand, 4579470 - 4579835
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcagga |
116 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| ||||| |||| ||||||| ||| || |||||||||||| ||| ||||| |||| |||| |
|
|
| T |
4579470 |
agttcatgtatgaacagcctccaggtctcgtgtcctcctccaccttcttcttcaactcaattgccttttgcctcatct---tctttgctttctctcccac |
4579566 |
T |
|
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
|||||||||||| ||||| |||||||| ||||| ||||| ||||| || ||||||| ||||||| |||||| |||||| | |||||| ||| || || |
|
|
| T |
4579567 |
catcaattcattaaccagcttctccacctcctctctcttcacattagtgtcgatttcaattccaattttccatgtattgcataaatatctgcagcttact |
4579666 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|| ||||| || ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| | || |
|
|
| T |
4579667 |
gggtgatcagcgaaaaatggccaacacaacattggaactccagcagatatgctttcagtgattgagttccatccgcaatgagtcaagaatccaccaattg |
4579766 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttctttca |
385 |
Q |
| |
|
| |||||||||| ||||| |||||| |||||||| || | |||||| ||||||||| ||||||| |||| |
|
|
| T |
4579767 |
aagggtggttcagtacttgctcttgcggacaccagctcgttattaggcctctatctgaaatttcattca |
4579835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 18 - 385
Target Start/End: Original strand, 4598209 - 4598574
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctctctaattctttcctttatctcaggac |
117 |
Q |
| |
|
||||||||||||||||||||||| ||||||| ||| ||||| |||| |||||| || || | |||||||||| | |||||||||||||||| ||| |
|
|
| T |
4598209 |
agttcatgtatgaacaacctccaagtctcgtttcctcctccgccttcatcttcaaatcaattgtcttttgcctcatt--ttctttcctttatctcccgac |
4598306 |
T |
|
| Q |
118 |
atcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgctg |
217 |
Q |
| |
|
|||||||| |||||||| |||||||| ||||| ||||| ||||| || || |||||| ||||||||| ||||||||||||||||||||| ||||| ||| |
|
|
| T |
4598307 |
atcaattcgttgaccagcttctccacctcctctctcttcacattagtttcaattttgattccaatctcccattcattgcaaatatatctgcagttggctt |
4598406 |
T |
|
| Q |
218 |
gctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactga |
317 |
Q |
| |
|
||||||| || ||||| || |||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| | ||| |
|
|
| T |
4598407 |
gctgatccgcgaaaaagggacaacacaacattggcactccggcacatatactttcagtggttgagttccatccgcaatgagttaagaatccaccaattga |
4598506 |
T |
|
| Q |
318 |
tgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttctttca |
385 |
Q |
| |
|
|| ||||| ||||||| |||||| ||||||| ||||| | || ||||||||| ||||||| |||| |
|
|
| T |
4598507 |
aggatggtttaatacttgctcttgcagacaccagcttgcaactaagcctctatctgaaatttcattca |
4598574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 18 - 380
Target Start/End: Original strand, 4585674 - 4586034
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcagga |
116 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||| |||| ||||||| ||| || |||||||||||| ||| ||||||| || |||| |
|
|
| T |
4585674 |
agtttatgtatgaacaacctccaggtctcgtgtcctcctccgccttcttcttcaactcgattgccttttgcctcatct---tctttccattctctcccac |
4585770 |
T |
|
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| ||||| ||||| || || | || | ||||||| |||||||||||||||| ||| ||||||| | |
|
|
| T |
4585771 |
catcaattcattgaccaacttctccacctcctctctcttcacattggtgtcaacttccatcccaatctcccattcattgcaaataattctacagtttgtt |
4585870 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| | || |
|
|
| T |
4585871 |
ggctgatcagcaatgaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccacagtgagtcaagaatccaccaattg |
4585970 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttc |
380 |
Q |
| |
|
| |||||||||||||||| |||||| || ||||||| || ||||| ||||||||| ||||||| |
|
|
| T |
4585971 |
aagggtggttcaatacttgctcttgcgggcaccaacccgcgattaggcctctatctgaaatttc |
4586034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 20 - 380
Target Start/End: Original strand, 4625991 - 4626349
Alignment:
| Q |
20 |
ttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcaggaca |
118 |
Q |
| |
|
||||||||||||||||| || || || ||| | |||| |||| ||||||| ||||||||||||||||||| ||| ||||||| ||||||| | || |
|
|
| T |
4625991 |
ttcatgtatgaacaaccaccgggactaatgttctcctctgccttcttcttcaactccatggccttttgcctcatct---tctttccgttatctcctgcca |
4626087 |
T |
|
| Q |
119 |
tcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgctgg |
218 |
Q |
| |
|
||||| |||||| ||||||||| || |||||||||| ||||| | |||||||| ||||||||| ||||||||||||||||||||| || |||| ||| |
|
|
| T |
4626088 |
tcaatgcattgatcagtttctctaccccctccctcttcacattagcatcgatttccattccaatctcccattcattgcaaatatatctacaatttgttgg |
4626187 |
T |
|
| Q |
219 |
ctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgat |
318 |
Q |
| |
|
|||||| |||||| ||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||| |||||||| ||||||||||| | ||| |
|
|
| T |
4626188 |
ctgatcagcaaaatttggccaacacagcattggaactccagcgcatatgctttcaatggttgagttccatccacaatgagttaagaatccaccaattgaa |
4626287 |
T |
|
| Q |
319 |
gggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttc |
380 |
Q |
| |
|
|| ||||||| |||||||||||| |||||||| ||||| ||||| ||||||||| ||||||| |
|
|
| T |
4626288 |
ggatggttcagtactttctcttgcggacaccagcttgcgattaggcctctatctgaaatttc |
4626349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 18 - 385
Target Start/End: Original strand, 4571010 - 4571375
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcagga |
116 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| ||||| |||| ||||||| |||||| |||| |||| ||| ||||||||||||||| |
|
|
| T |
4571010 |
agttcatgtatgaacaaccaccaggtctcgtgtcctcctccgccttcttcttcatctccattatatttttcctcatct---tctttcctttatctcccac |
4571106 |
T |
|
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
||||||||||||||||| |||||||| || | ||||| ||||| |||||||||| | ||||||||| |||| |||||| |||||||| ||||||||| |
|
|
| T |
4571107 |
catcaattcattgaccaaattctccacctcatttctcttcacattagtatcgatttcgattccaatctcccatgtattgcagatatatctacagtttgct |
4571206 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||||||||||| | |||||||||| || |||||||||||||| || ||||||||||| ||||| | || |
|
|
| T |
4571207 |
ggctgatcagcaaaaaatggctaacacaacattggaactccagtagatatgctttcggtcgttgagttccatccacagtgagtcaagaaaccaccaattg |
4571306 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttctttca |
385 |
Q |
| |
|
| || |||||||||||||||||||| | ||||||| || ||||| ||||||||| ||||||| |||| |
|
|
| T |
4571307 |
aaggatggttcaatactttctcttgcgagcaccaaccagcaattaggcctctatctgaaatttcattca |
4571375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 18 - 385
Target Start/End: Original strand, 4592269 - 4592634
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcagga |
116 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| | |||| |||| ||||||| ||| || ||||||| |||| ||| |||||||||| |||| |
|
|
| T |
4592269 |
agttcatatatgaacaacctccaggtctcgtgttctcctctgccttcttcttcaactcgattgcctttttcctcatct---tctttcctttctctcccac |
4592365 |
T |
|
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||| ||||||||||| ||||| |||| | ||||||| |||||||||| ||||| ||| ||||||| | |
|
|
| T |
4592366 |
catcaattcattgataagtttctccacctcctctctctttacattcgtatcaatttccatcccaatctcccattcattgtaaataagtctacagtttgtt |
4592465 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| | || |
|
|
| T |
4592466 |
ggctgatcactaaagaatggccaacacaacattggaattccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatccaccaattg |
4592565 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttctttca |
385 |
Q |
| |
|
| |||||||| ||||||| |||||| |||||||| || || |||| ||||||||| ||||||| |||| |
|
|
| T |
4592566 |
aagggtggtttaatacttgctcttgaggacaccagctcgcgattacgcctctatctgaaatttcattca |
4592634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 18 - 397
Target Start/End: Complemental strand, 4490449 - 4490071
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcagga |
116 |
Q |
| |
|
||||||||||||||| ||| || ||||||||||| || | |||| ||||||| |||| | |||||||||||| ||| |||||||||| |||| |
|
|
| T |
4490449 |
agttcatgtatgaactaccaccgagtctcgtgtcctccgctgccttcttcttcaactccgtcgccttttgcctcatct---tctttcctttctctcccac |
4490353 |
T |
|
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
|||||||||||||| ||||||||| || || || ||||||||||| ||||| ||||| | ||||||| |||||| | ||||||| ||| | | | | |
|
|
| T |
4490352 |
catcaattcattgatcagtttctctacctcttctctctttacattggtatcaattttcatcccaatctcccattcttcgcaaataattctactgctaagt |
4490253 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|| ||||| |||||||||||||||||||||||||| |||||||||||||| || || || ||||||||||||| |||||||||||||||||||| | || |
|
|
| T |
4490252 |
ggttgatcagcaaaaaatggccaacacaacattggcactccagcacatatactctccatgattgagttccatccacaatgagtcaagaatccaccaattg |
4490153 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttctttca-aaaatcagatga |
397 |
Q |
| |
|
| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
4490152 |
aagggtgattcaataccttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatga |
4490071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 18 - 402
Target Start/End: Original strand, 4461161 - 4461544
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcagga |
116 |
Q |
| |
|
||||| |||||||| |||||||||||| || ||| ||||| |||| ||||| | |||||| ||||||||||| ||| ||||||| | |||| |
|
|
| T |
4461161 |
agttcttgtatgaaacacctccaggtctggtatcctcctccaccttcttcttgaattccatgaccttttgcctcatct---tctttccaatctctccaac |
4461257 |
T |
|
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
||||||||| ||||||| |||||||| || |||||||| |||| | ||||||||| |||||||| ||||| ||||||||| |||| ||||||||| |
|
|
| T |
4461258 |
catcaattcgttgaccaacttctccacctcatccctcttcacatctttatcgatttcaagtccaatctcccatttgttgcaaataaatctacagtttgct |
4461357 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|||||||| |||| ||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| | || |
|
|
| T |
4461358 |
ggctgatcaccaaagaatggccaacacaacatcggcactccagcacatatgctttcagtggttgaattccatccacaatgagtcaagaatccaccaattg |
4461457 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttctttca-aaaatcagatgagaaaa |
402 |
Q |
| |
|
| |||||||||| ||||| |||||| |||||||| ||||||||||| ||||||||| ||||||| |||| ||| |||||||| |||| |
|
|
| T |
4461458 |
aagggtggttcagtacttgctcttgcggacaccagcttgctattaggcctctatctgaaatttcattcacaaactcagatgacaaaa |
4461544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 67 - 380
Target Start/End: Original strand, 4622229 - 4622540
Alignment:
| Q |
67 |
cttcagctccatggccttttgcctctctaattctttcctttatctcaggacatcaattcattgaccagtttctccacttcctccctctttacatttgtat |
166 |
Q |
| |
|
||||| ||||||||||||||| |||| |||||||||||||||| |||||||||||||||| ||| ||| ||| ||||| || || ||||| |||| |
|
|
| T |
4622229 |
cttcaactccatggccttttg--tctcatcttctttcctttatctcccgacatcaattcattgatcagattcgacacctcctctcttttcacattagtat |
4622326 |
T |
|
| Q |
167 |
cgattttgtttccaatcttccattcattgcaaatatatcttcagtttgctggctgatctgcaaaaaatggccaacacaacattggaactccagcacatat |
266 |
Q |
| |
|
||||| | ||||||||| |||| |||||| |||||||| ||||||| ||||||||| || |||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
4622327 |
tgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaacacagcattgaaactccagcacatat |
4622426 |
T |
|
| Q |
267 |
gctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgatgggtggttcaatactttctcttgtggacaccaacttgctattagtcct |
366 |
Q |
| |
|
|||||| |||||||| |||||||| |||||||||||||||||||| | || |||||||| | ||||| ||||||||||||||||| ||| ||||| ||| |
|
|
| T |
4622427 |
gctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtggacaccaacctgcgattaggcct |
4622526 |
T |
|
| Q |
367 |
ctatcttaaatttc |
380 |
Q |
| |
|
||| || ||||||| |
|
|
| T |
4622527 |
ctacctgaaatttc |
4622540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 117 - 385
Target Start/End: Complemental strand, 4515118 - 4514850
Alignment:
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
||||||||||||||| || || || || ||||| ||||| ||||| ||||||||| | | ||||||| |||||||||||||||| |||| ||||||| | |
|
|
| T |
4515118 |
catcaattcattgacaagcttttcaacctcctctctcttcacattcatatcgatttcgatcccaatctcccattcattgcaaataaatctacagtttgtt |
4515019 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|| ||||| |||| ||| ||||||| | |||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||| || | || |
|
|
| T |
4515018 |
ggttgatcaccaaagaattgccaacaaagcattggcactccagcgcatatgctctcagtggttgagttccatccgcaatgagtcaagaatccgccaattg |
4514919 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttctttca |
385 |
Q |
| |
|
| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||| |||| |
|
|
| T |
4514918 |
aagggtggttcaaaactttctcttgtggacaccaacttgctattaggcctctatctgcaatttcattca |
4514850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 26 - 371
Target Start/End: Original strand, 4516367 - 4516710
Alignment:
| Q |
26 |
tatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcaggacatcaatt |
124 |
Q |
| |
|
||||||||||| || ||||| |||||| |||| |||| ||||||| |||||||||||||||||| ||| ||||||||||||||| ||| |||| |
|
|
| T |
4516367 |
tatgaacaaccacctggtcttgtgtcctcctctgccttcttcttcaattccatggccttttgcctcatct---tctttcctttatctcccaccattaatt |
4516463 |
T |
|
| Q |
125 |
cattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgctggctgatc |
224 |
Q |
| |
|
|||||| ||| |||||||| ||||| ||||| ||||| ||||| |||| |||||||| ||||||||||||||||||||| || |||| |||||| || |
|
|
| T |
4516464 |
cattgatcagcttctccacctcctctctcttcacattggtatcaatttctgctccaatctcccattcattgcaaatatatctgcaatttgttggctgctc |
4516563 |
T |
|
| Q |
225 |
tgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgatgggtgg |
324 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||| ||||| |||||||| | || ||||||||||| ||||||||||||||||| || ||||| || ||| |
|
|
| T |
4516564 |
agcaaaaaaaggccaacacaacattggtactccggcacagatgctttccattgtggagttccatccacaatgagtcaagaatcctccaactgaaggatgg |
4516663 |
T |
|
| Q |
325 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatc |
371 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||||| |||||||| |
|
|
| T |
4516664 |
ttcaacactttctcttgcggacaccagcttgctattacgcctctatc |
4516710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 97 - 371
Target Start/End: Complemental strand, 4256629 - 4256354
Alignment:
| Q |
97 |
ttctttcctttatctcaggacatcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgc |
196 |
Q |
| |
|
||||||||||| |||| |||||||||||||||| ||| |||||||| || || ||||| ||||| |||| ||||| ||||||||| |||||| | | |
|
|
| T |
4256629 |
ttctttcctttttctcccgacatcaattcattgatcagattctccacctcatctctcttcacattagtattgatttcaattccaatctcccattcgctac |
4256530 |
T |
|
| Q |
197 |
aaatatatcttcagtttgctgg-ctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaat |
295 |
Q |
| |
|
||||| |||| ||||||| ||| |||||| |||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||| |||| |
|
|
| T |
4256529 |
aaataaatctacagtttgttggtctgatcagcaaaaaatggccaacacaacattggaactccggcacaaatgctttcaatggttgagttccatcctcaat |
4256430 |
T |
|
| Q |
296 |
gagtcaagaatccaccgactgatgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatc |
371 |
Q |
| |
|
|||||||||||||||| ||||| | |||||||| ||||| |||||| ||||||||||| | |||||||||||||| |
|
|
| T |
4256429 |
gagtcaagaatccaccaactgaagagtggttcagtacttgctcttgcggacaccaactctcgattagtcctctatc |
4256354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 18 - 350
Target Start/End: Original strand, 4469841 - 4470171
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcagga |
116 |
Q |
| |
|
||||| |||||||| |||||||||||| || ||| ||||| |||| ||||| | ||||||| ||||| |||| ||| ||||||| || |||| |
|
|
| T |
4469841 |
agttcttgtatgaaacacctccaggtctggtatcctcctccaccttcttcttgaactccatgatcttttccctcatct---tctttccattctctccaac |
4469937 |
T |
|
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
||||||||||||||| || |||||||| || || ||||| |||| | ||||||||| |||||||| |||||||||||||||| |||| || |||||| |
|
|
| T |
4469938 |
catcaattcattgactagcttctccacctcatctctcttcacatctttatcgatttcaagtccaatctcccattcattgcaaataaatctacaatttgct |
4470037 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
||||||| |||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
4470038 |
agctgatcaccaaagaatggccaacacaacattggcactccagcgcatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgattg |
4470137 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacacca |
350 |
Q |
| |
|
| |||||||||| ||||| |||||| |||||||| |
|
|
| T |
4470138 |
aagggtggttcagtacttgctcttgaggacacca |
4470171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 20 - 380
Target Start/End: Original strand, 4557165 - 4557523
Alignment:
| Q |
20 |
ttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcaggaca |
118 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| ||||| |||| |||||| ||| || ||||| || | ||| |||||||||| || | || |
|
|
| T |
4557165 |
ttcatgtatgaacaaccaccaggtctcgtgtcctcctccgccttcgtcttcatctcaattatctttttccacatct---tctttcctttctccccctcca |
4557261 |
T |
|
| Q |
119 |
tcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgctgg |
218 |
Q |
| |
|
||||||||||||||| ||||| || || || ||||| ||||| || || |||| | ||||||| |||| ||||||||||||||| ||||||||||| |
|
|
| T |
4557262 |
tcaattcattgaccaaattctctacctcatctctcttcacattggtgtcaatttccatgccaatctcccatgtattgcaaatatatctgcagtttgctgg |
4557361 |
T |
|
| Q |
219 |
ctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgat |
318 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| | ||| |
|
|
| T |
4557362 |
ctgatcagcaaaaaatggccaacacaacattggaactccagcagatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaattgaa |
4557461 |
T |
|
| Q |
319 |
gggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttc |
380 |
Q |
| |
|
|| ||||| ||||||| |||||| || ||||| | || ||||| ||||||||| ||||||| |
|
|
| T |
4557462 |
ggatggtttaatacttgctcttgcgggcaccagcccgcgattaggcctctatctgaaatttc |
4557523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 18 - 385
Target Start/End: Original strand, 3171779 - 3172144
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcagga |
116 |
Q |
| |
|
||||||||||||||||||| ||| ||| || ||| |||| |||| ||||||| |||||||||| |||||||| ||| |||||||||| |||| |
|
|
| T |
3171779 |
agttcatgtatgaacaaccaccaaatcttgtatcctcctctgccttcttcttcaactccatggccctttgcctcatct---tctttcctttctctcccac |
3171875 |
T |
|
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
||||||||| |||| ||||||||| || ||| | ||||||||||| ||||| |||| | |||||||||||||| | ||||||| ||| | ||| | | |
|
|
| T |
3171876 |
catcaattcgttgatcagtttctctacctcccctctctttacattggtatcaatttccatcccaatcttccattcttggcaaataattctactgttaggt |
3171975 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|| ||||| ||||||||||||| |||||||||||| | ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| || | || |
|
|
| T |
3171976 |
ggttgatcagcaaaaaatggcctacacaacattggcattccagcacatacactttccgtggttgagttccatccgcagtgagtcaagaatccgccaattg |
3172075 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttctttca |
385 |
Q |
| |
|
| || |||||||| ||||||||||| |||||||||||||||||||| ||||||||| ||||||| |||| |
|
|
| T |
3172076 |
aaggatggttcaacactttctcttgcggacaccaacttgctattaggcctctatctgaaatttcattca |
3172144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 117 - 371
Target Start/End: Original strand, 4457729 - 4457983
Alignment:
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
||||||||||||||| | |||||||| || || ||||| |||||||||||||||| | ||||||| ||||||||||||||| |||| || ||| | |
|
|
| T |
4457729 |
catcaattcattgactaacttctccacctcatctctcttcacatttgtatcgatttccatcccaatctctcattcattgcaaataaatctacaacttgtt |
4457828 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|||| ||| |||| |||||||||| || |||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| |||| || |
|
|
| T |
4457829 |
ggcttatcaccaaagaatggccaacgcagcattggcactccagcgcatatgctttcagtggttgagtttcatccacaatgagtcaagaatcctccgattg |
4457928 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatc |
371 |
Q |
| |
|
| ||||||||||| ||||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
4457929 |
aagggtggttcaacactttatcttgtggacaccaacttgctattaagcctctatc |
4457983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 18 - 370
Target Start/End: Complemental strand, 4504491 - 4504141
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcagga |
116 |
Q |
| |
|
||||||||||||||||||| ||| |||| |||||| |||| |||| ||||||| ||||||||||||||||||| ||| |||||||||| |||| |
|
|
| T |
4504491 |
agttcatgtatgaacaaccaccaagtcttgtgtcctcctctgccttcttcttcaactccatggccttttgcctcatct---tctttcctttctctcccac |
4504395 |
T |
|
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatctt-cagtttgc |
215 |
Q |
| |
|
|||||||||||| | |||||||| || || || |||| |||||| | ||| || || | ||||||| |||||| | ||||||| || || | || |
|
|
| T |
4504394 |
catcaattcattaataagtttctctacctcttctctctgtacattggcatcaatcttcatcccaatctcccattcttcgcaaata-atgttgctattaag |
4504296 |
T |
|
| Q |
216 |
tggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgact |
315 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||||||||||| |||| | |
|
|
| T |
4504295 |
tggctgatcagaaaaaaatggccaacacaacattggcactccagcacaaacactttcagtggttgagttccatccacaatgagtcaagaatcctccgatt |
4504196 |
T |
|
| Q |
316 |
gatgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctat |
370 |
Q |
| |
|
|| ||||||||||| ||||| |||||||||||||||||||||| |||||||||| |
|
|
| T |
4504195 |
gaagggtggttcaacactttatcttgtggacaccaacttgctacaagtcctctat |
4504141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 66 - 380
Target Start/End: Complemental strand, 4260200 - 4259888
Alignment:
| Q |
66 |
tcttcagctccatggccttttgcctc-tctaattctttcctttatctcaggacatcaattcattgaccagtttctccacttcctccctctttacatttgt |
164 |
Q |
| |
|
|||||| ||||||| ||||||||||| ||| ||||||||| |||| ||||| | |||||||| ||| ||| |||| || || || || ||||| || |
|
|
| T |
4260200 |
tcttcaactccatgaccttttgcctcatct---tctttccttcttctcctgacataatttcattgatcagcttcgccacctcatctcttttcacattagt |
4260104 |
T |
|
| Q |
165 |
atcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgctggctgatctgcaaaaaatggccaacacaacattggaactccagcacat |
264 |
Q |
| |
|
|| |||| ||||||||| |||||| || |||||| |||| ||||||| ||||||||| |||||||||||||||||||||||||||||| | ||||| |
|
|
| T |
4260103 |
attaatttcaattccaatctcccattcgttacaaataaatctacagtttgttggctgatcagcaaaaaatggccaacacaacattggaacttcggcacaa |
4260004 |
T |
|
| Q |
265 |
atgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgatgggtggttcaatactttctcttgtggacaccaacttgctattagtc |
364 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| ||||||||||| ||||| | |||||||| ||||| |||||| |||||||| || || ||||| | |
|
|
| T |
4260003 |
atgctttcaatggttgagttccatccgcaatgagttaagaatccaccaactgaagagtggttcagtacttgctcttgcggacaccagctcgcgattaggc |
4259904 |
T |
|
| Q |
365 |
ctctatcttaaatttc |
380 |
Q |
| |
|
||||||| ||||||| |
|
|
| T |
4259903 |
ctctatccgaaatttc |
4259888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 157 - 380
Target Start/End: Original strand, 4506032 - 4506255
Alignment:
| Q |
157 |
acatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgctggctgatctgcaaaaaatggccaacacaacattggaactc |
256 |
Q |
| |
|
||||| ||||| |||| | ||||||||| | |||||||||||||| |||| ||||||| ||| ||||| |||| || |||||||||| |||||| |||| |
|
|
| T |
4506032 |
acattagtatcaatttcgattccaatctccaattcattgcaaataaatctacagtttgttggttgatcaccaaagaacggccaacacagcattggcactc |
4506131 |
T |
|
| Q |
257 |
cagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgatgggtggttcaatactttctcttgtggacaccaacttgc |
356 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| || || ||||||||||||| |||||| ||||| |
|
|
| T |
4506132 |
cagcgcatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccaattgaagggtgatttaacactttctcttgtgaacaccagcttgc |
4506231 |
T |
|
| Q |
357 |
tattagtcctctatcttaaatttc |
380 |
Q |
| |
|
||| || | ||||||| ||||||| |
|
|
| T |
4506232 |
tataaggcttctatctgaaatttc |
4506255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 401 - 501
Target Start/End: Original strand, 4575000 - 4575100
Alignment:
| Q |
401 |
aagggaacatagaatagaaagcattcataacatcactctcaagttcattagaagtattgaataccatagcagaagctctatgacatttatctcccacttc |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
4575000 |
aagggaacatagaatagaaagcattcataacatcactctcaagttcattagaagtattgaataccataccagaagctctatgacatttatctgccacttc |
4575099 |
T |
|
| Q |
501 |
a |
501 |
Q |
| |
|
| |
|
|
| T |
4575100 |
a |
4575100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 401 - 501
Target Start/End: Original strand, 4561196 - 4561296
Alignment:
| Q |
401 |
aagggaacatagaatagaaagcattcataacatcactctcaagttcattagaagtattgaataccatagcagaagctctatgacatttatctcccacttc |
500 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| |
|
|
| T |
4561196 |
aagggaacatagaatagaaagcattcataacatcactctcaagttcattagaagtattgaataccataccagaagctctaagacatttatctgccacttc |
4561295 |
T |
|
| Q |
501 |
a |
501 |
Q |
| |
|
| |
|
|
| T |
4561296 |
a |
4561296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 124 - 372
Target Start/End: Original strand, 4493097 - 4493345
Alignment:
| Q |
124 |
tcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgctggctgat |
223 |
Q |
| |
|
||||||||||| |||||||| | || || || ||||| ||||||||| |||||||| | ||||||||||||| |||| ||||||| |||||||| |
|
|
| T |
4493097 |
tcattgaccagattctccacattttctctattaacattcctatcgatttctactccaatctccaattcattgcaaatcaatctacagtttgttggctgat |
4493196 |
T |
|
| Q |
224 |
ctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgatgggtg |
323 |
Q |
| |
|
| ||| || ||||||||||||||||| ||||| ||||||||| ||| || |||||||||||||| |||||||||||||||||||| | || |||| |
|
|
| T |
4493197 |
cactaaagaaaggccaacacaacattggcactccggcacatatgtttttggtagttgagttccatccacaatgagtcaagaatccaccaatcgaatggtg |
4493296 |
T |
|
| Q |
324 |
gttcaatactttctcttgtggacaccaacttgctattagtcctctatct |
372 |
Q |
| |
|
||||| | ||||||||||||||||||||| || ||||| ||||||||| |
|
|
| T |
4493297 |
gttcagcagtttctcttgtggacaccaactagcaattaggcctctatct |
4493345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 121 - 371
Target Start/End: Original strand, 4568195 - 4568445
Alignment:
| Q |
121 |
aattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgctggct |
220 |
Q |
| |
|
|||||||| | ||| |||||||| ||||| ||||| ||||||||||| |||| | |||| |||| | | | ||| ||||||||||| |||| || ||||| |
|
|
| T |
4568195 |
aattcattcatcagcttctccacctcctctctcttcacatttgtatcaatttcgattccgatctccaacttattacaaatatatctgcagtatgttggct |
4568294 |
T |
|
| Q |
221 |
gatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgatgg |
320 |
Q |
| |
|
| || | |||||| |||||||| |||||||| |||| ||||| |||||||| || ||||||||||| |||||||||||||||| || ||||| || |
|
|
| T |
4568295 |
gctcagaaaaaaaaggccaacataacattggtactctggcacaaatgctttccaatgtggagttccatccacaatgagtcaagaatcgtccaactgaagg |
4568394 |
T |
|
| Q |
321 |
gtggttcaatactttctcttgtggacaccaacttgctattagtcctctatc |
371 |
Q |
| |
|
||||||||| |||| |||||| |||||||| ||||||||| | |||||||| |
|
|
| T |
4568395 |
gtggttcaacacttgctcttgcggacaccagcttgctatttggcctctatc |
4568445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 401 - 500
Target Start/End: Original strand, 4458287 - 4458386
Alignment:
| Q |
401 |
aagggaacatagaatagaaagcattcataacatcactctcaagttcattagaagtattgaataccatagcagaagctctatgacatttatctcccacttc |
500 |
Q |
| |
|
||||||||||||| |||| || |||||||||||||||||||||||||| ||||||||||| || |||| ||| |||||||||||| ||||| ||||||| |
|
|
| T |
4458287 |
aagggaacatagagtagagagtattcataacatcactctcaagttcataagaagtattgataacaatagaagaggctctatgacatctatctgccacttc |
4458386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 423 - 501
Target Start/End: Original strand, 3172455 - 3172533
Alignment:
| Q |
423 |
attcataacatcactctcaagttcattagaagtattgaataccatagcagaagctctatgacatttatctcccacttca |
501 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| || |||||||||||| | |||||||||||||| |||||| |
|
|
| T |
3172455 |
attcataacatcactctcaagttcattagaagtgttgaaaacaatagcagaagctttgtgacatttatctcctacttca |
3172533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 262 - 380
Target Start/End: Complemental strand, 4299673 - 4299555
Alignment:
| Q |
262 |
catatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgatgggtggttcaatactttctcttgtggacaccaacttgctatta |
361 |
Q |
| |
|
|||||||||||| |||||||||||||||| || ||||||||||||||||| | ||| |||||||||| ||||| |||||||||||| | ||||| ||| |
|
|
| T |
4299673 |
catatgctttcaatggttgagttccatccacagtgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacactagcttgcggtta |
4299574 |
T |
|
| Q |
362 |
gtcctctatcttaaatttc |
380 |
Q |
| |
|
| ||||||| | ||||||| |
|
|
| T |
4299573 |
ggcctctatttgaaatttc |
4299555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 401 - 490
Target Start/End: Original strand, 4470495 - 4470584
Alignment:
| Q |
401 |
aagggaacatagaatagaaagcattcataacatcactctcaagttcattagaagtattgaataccatagcagaagctctatgacatttat |
490 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||| |||||||||||||||||||| || || |||||||||||||| |||||||||| |
|
|
| T |
4470495 |
aagggaatatagaatagagttcattcataacatcactttcaagttcattagaagtattcaaaacaatagcagaagctctttgacatttat |
4470584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 401 - 502
Target Start/End: Original strand, 4481385 - 4481486
Alignment:
| Q |
401 |
aagggaacatagaatagaaagcattcataacatcactctcaagttcattagaagtattgaataccatagcagaagctctatgacatttatctcccacttc |
500 |
Q |
| |
|
||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||| || | |||||| ||||| |||||||||||| |||||| |
|
|
| T |
4481385 |
aagggaatatagaatagagagaattcataacatcactctcaagttcataagaagtattgataacaaaagcagatgctctttgacatttatctgtcacttc |
4481484 |
T |
|
| Q |
501 |
at |
502 |
Q |
| |
|
|| |
|
|
| T |
4481485 |
at |
4481486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 420 - 502
Target Start/End: Complemental strand, 4503806 - 4503724
Alignment:
| Q |
420 |
agcattcataacatcactctcaagttcattagaagtattgaataccatagcagaagctctatgacatttatctcccacttcat |
502 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||| || || || || ||||| |||||||||||| ||||||||| |
|
|
| T |
4503806 |
agcattcatagcatcactctcaagttcattagaagtattgaaaacaatggctgaggctctttgacatttatctgccacttcat |
4503724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 401 - 483
Target Start/End: Complemental strand, 4514561 - 4514479
Alignment:
| Q |
401 |
aagggaacatagaatagaaagcattcataacatcactctcaagttcattagaagtattgaataccatagcagaagctctatga |
483 |
Q |
| |
|
|||||| ||||||||| | |||||||||||||||||||||||| |||||||||||||| || | |||||||||||||||||| |
|
|
| T |
4514561 |
aagggagcatagaataaagagcattcataacatcactctcaagatcattagaagtatttaaaaaaatagcagaagctctatga |
4514479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 401 - 473
Target Start/End: Complemental strand, 4299261 - 4299189
Alignment:
| Q |
401 |
aagggaacatagaatagaaagcattcataacatcactctcaagttcattagaagtattgaataccatagcaga |
473 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||||||||||||||| | ||||||| || || |||||||| |
|
|
| T |
4299261 |
aagggaacatagaatagagagcattcattacatcactctcaagttcatcataagtattaaaaacaatagcaga |
4299189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 401 - 460
Target Start/End: Complemental strand, 4266606 - 4266547
Alignment:
| Q |
401 |
aagggaacatagaatagaaagcattcataacatcactctcaagttcattagaagtattga |
460 |
Q |
| |
|
||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4266606 |
aagggaacatagagtagagagcattcataacatcactctcaagttcatatgaagtattga |
4266547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 356
Target Start/End: Complemental strand, 4391996 - 4391885
Alignment:
| Q |
245 |
acattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgatgggtggttcaatactttctcttgtgg |
344 |
Q |
| |
|
|||||||||||| || ||| ||||||||| ||| |||||| ||||| ||||| || |||||||||| | | | |||||||||||||||| ||||| || |
|
|
| T |
4391996 |
acattggaactctagaacaaatgctttcaatgggtgagtttcatccacaatgcgttaagaatccacaaattcaagggtggttcaatacttgctctttcgg |
4391897 |
T |
|
| Q |
345 |
acaccaacttgc |
356 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
4391896 |
acaccatcttgc |
4391885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 401 - 492
Target Start/End: Original strand, 4461815 - 4461906
Alignment:
| Q |
401 |
aagggaacatagaatagaaagcattcataacatcactctcaagttcattagaagtattgaataccatagcagaagctctatgacatttatct |
492 |
Q |
| |
|
||||||| ||| |||||| ||||||||| |||||| || ||||||||||||||||| || | | |||||||||||| |||||||||||| |
|
|
| T |
4461815 |
aagggaatataaaatagagttcattcataatatcactttcgagttcattagaagtattcaaaataacagcagaagctctgtgacatttatct |
4461906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 483
Target Start/End: Original strand, 4506568 - 4506631
Alignment:
| Q |
420 |
agcattcataacatcactctcaagttcattagaagtattgaataccatagcagaagctctatga |
483 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||||||||| || |||| ||| ||||||||| |
|
|
| T |
4506568 |
agcattcagaacattactctcaagttcattagaagtattgagaacaatagaagaggctctatga |
4506631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 420 - 461
Target Start/End: Complemental strand, 4489776 - 4489735
Alignment:
| Q |
420 |
agcattcataacatcactctcaagttcattagaagtattgaa |
461 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4489776 |
agcattgatagcatcactctcaagttcattagaagtattgaa |
4489735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 458
Target Start/End: Original strand, 4602484 - 4602541
Alignment:
| Q |
401 |
aagggaacatagaatagaaagcattcataacatcactctcaagttcattagaagtatt |
458 |
Q |
| |
|
|||||||||||||||| | |||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
4602484 |
aagggaacatagaatatagtgcattcattacatcactctcaagttcattgtaagtatt |
4602541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 4299743 - 4299671
Alignment:
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccat |
189 |
Q |
| |
|
|||||||||||||| ||| || ||||| ||||| ||| | |||||||||||||||| | ||||||||| |||| |
|
|
| T |
4299743 |
catcaattcattgatcagcttttccacctcctctctcctcacatttgtatcgatttcgattccaatctcccat |
4299671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 448
Target Start/End: Complemental strand, 4259594 - 4259547
Alignment:
| Q |
401 |
aagggaacatagaatagaaagcattcataacatcactctcaagttcat |
448 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
4259594 |
aagggaacatagaatagagcacattcattacatcactctcaagttcat |
4259547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 483
Target Start/End: Complemental strand, 4256049 - 4255979
Alignment:
| Q |
413 |
aatagaaagcattcataacatcactctcaagttcattagaagtattgaataccatagcagaagctctatga |
483 |
Q |
| |
|
|||||| |||||||| ||||| ||||||||||||||| |||| || || || |||||||| ||||||||| |
|
|
| T |
4256049 |
aatagagagcattcaatacatcgctctcaagttcattataagtgttaaaaacaatagcagaggctctatga |
4255979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 461
Target Start/End: Complemental strand, 4484201 - 4484163
Alignment:
| Q |
423 |
attcataacatcactctcaagttcattagaagtattgaa |
461 |
Q |
| |
|
|||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
4484201 |
attcataacatcactctctagttcattaaaagtattgaa |
4484163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 470
Target Start/End: Original strand, 4568765 - 4568805
Alignment:
| Q |
430 |
acatcactctcaagttcattagaagtattgaataccatagc |
470 |
Q |
| |
|
||||||||||||||||||||| |||||||||| || ||||| |
|
|
| T |
4568765 |
acatcactctcaagttcattataagtattgaaaacaatagc |
4568805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 184; Significance: 2e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 18 - 380
Target Start/End: Original strand, 1281152 - 1281512
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctctctaattctttcctttatctcaggac |
117 |
Q |
| |
|
||||||||||||||||||| || ||||| |||| | ||||| || ||||||| ||||||||||||| ||||| ||||||||||| ||| | || |
|
|
| T |
1281152 |
agttcatgtatgaacaaccacccggtctagtgttctcctccgccgccttcttcaattccatggcctttt--ctctcatattctttccttcatccccggct |
1281249 |
T |
|
| Q |
118 |
atcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgctg |
217 |
Q |
| |
|
||||||||||||| || || |||| ||||| ||||| |||||||||||||||| | ||||||||||||||||| |||||| |||| |||| || || |
|
|
| T |
1281250 |
atcaattcattgatcaacttagccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttg |
1281349 |
T |
|
| Q |
218 |
gctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactga |
317 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
1281350 |
gctgatcagcaaaaaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgattga |
1281449 |
T |
|
| Q |
318 |
tgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttc |
380 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
1281450 |
agggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttc |
1281512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 157; Significance: 3e-83; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 18 - 402
Target Start/End: Original strand, 1674264 - 1674647
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcagga |
116 |
Q |
| |
|
||||||||||||||||||| || ||||| |||| | |||| |||| ||||||| |||||||||||||||||| ||| | ||||| || |||| |
|
|
| T |
1674264 |
agttcatgtatgaacaaccacctggtctagtgttctcctctgccttcttcttcaattccatggccttttgcctcatct---tttttccattctctcccac |
1674360 |
T |
|
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
|||||||||||||| || ||||||| |||| ||||| ||||| ||||| |||| | ||||||||||||||||| |||||| |||| ||||||| | |
|
|
| T |
1674361 |
catcaattcattgataagcttctccaaaccctctctcttcacattcgtatcaatttccataccaatcttccattcattacaaataaatctacagtttgtt |
1674460 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| || ||||||||||| |||| || |
|
|
| T |
1674461 |
ggctgatcagcaaaaaatggccaacacaacattggcactccagcgcatatgctttcagtggttgagttccatccgcagtgtgtcaagaatccgccgattg |
1674560 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttctttca-aaaatcagatgagaaaa |
402 |
Q |
| |
|
| ||||||||||| ||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||| ||| |||||||| |||| |
|
|
| T |
1674561 |
aagggtggttcaacactttctcttgtggacaccaatttgatattaggcctctatctgaaatttctttcataaactcagatgacaaaa |
1674647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 117 - 372
Target Start/End: Complemental strand, 16686264 - 16686009
Alignment:
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
||||||||||||||||| ||||||||| || || ||||| ||||| || || |||| | ||||||| ||||||||||||||||||||| || |||||| |
|
|
| T |
16686264 |
catcaattcattgaccaatttctccacctcatctctcttcacattggtgtcaatttccatgccaatctcccattcattgcaaatatatctgcattttgct |
16686165 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||| ||||||||||||| || |
|
|
| T |
16686164 |
ggctgatcagcaaaaaatggccaacacaacattggaactccagcatatatactttcagtggttgagttccatccacaatgagttaagaatccaccgattg |
16686065 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatct |
372 |
Q |
| |
|
| || ||||| ||||||| |||||| || ||||| || || ||||| | ||||||| |
|
|
| T |
16686064 |
aaggatggtttaatacttgctcttgcgggcaccagctcgcgattaggcttctatct |
16686009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 117 - 385
Target Start/End: Complemental strand, 20863840 - 20863572
Alignment:
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
|||||||||||| ||||| ||||||| ||||| ||||| ||||| || || |||| | | ||||||| ||||| |||||||| ||||| ||||||| |
|
|
| T |
20863840 |
catcaattcatttaccagcatctccacctcctctctcttgacattggtgtcaatttcgatcccaatctcccatttgttgcaaatgtatctgcagtttgtc |
20863741 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||| ||||||||||||||||| ||| |||||||||||||||| |||||||| | |||||||| | || |
|
|
| T |
20863740 |
ggctgatcagcaaaaaatggccagcacaacattggcactccagcacatatgctctcaatggttgagttccatccacaatgagttagaaatccaccaattg |
20863641 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttctttca |
385 |
Q |
| |
|
| || |||||||| || |||||||||||||||||||| || ||||| ||||||||| ||||||| |||| |
|
|
| T |
20863640 |
aaggatggttcaacaccttctcttgtggacaccaactcgcgattaggcctctatctgaaatttcattca |
20863572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 401 - 501
Target Start/End: Complemental strand, 20863283 - 20863183
Alignment:
| Q |
401 |
aagggaacatagaatagaaagcattcataacatcactctcaagttcattagaagtattgaataccatagcagaagctctatgacatttatctcccacttc |
500 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||| ||||| |||||||||| || |||||||| ||||| ||| || ||||| | ||||| |
|
|
| T |
20863283 |
aagggaacatagaatagagaacattcataacatcactctcaagctcattgaaagtattgaaaacaatagcagaggctctgtgaaatctatctactacttc |
20863184 |
T |
|
| Q |
501 |
a |
501 |
Q |
| |
|
| |
|
|
| T |
20863183 |
a |
20863183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 151; Significance: 1e-79; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 117 - 402
Target Start/End: Original strand, 24103134 - 24103420
Alignment:
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
||||||||||||||| | ||||| || || || ||||| |||||||||||||||| | |||||||| |||||||| ||||||| |||| ||||||| | |
|
|
| T |
24103134 |
catcaattcattgactaacttctcgacgtcatctctcttcacatttgtatcgatttcgagtccaatctcccattcatagcaaataaatctacagtttgtt |
24103233 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|| ||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |
|
|
| T |
24103234 |
ggttgatcaccaaagaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccaatcg |
24103333 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttcttt-caaaaatcagatgagaaaa |
402 |
Q |
| |
|
| |||||||| || ||||| |||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||| |||| |
|
|
| T |
24103334 |
aagggtggtttaacactttatcttgtggacaccaacttgctattagtcctctatctgaaacttctttaaaaaaatcagatgacaaaa |
24103420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 18 - 384
Target Start/End: Complemental strand, 28000193 - 27999829
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcagga |
116 |
Q |
| |
|
||||||||||||||||||| || ||||| |||| | |||| |||||||||||| ||||||||||||||||||| ||| | ||||| || |||| |
|
|
| T |
28000193 |
agttcatgtatgaacaaccacctggtctagtgttctcctctgcctttttcttcaactccatggccttttgcctcatct---tttttccattctctcccac |
28000097 |
T |
|
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
|||||||||||||| || ||||||| ||||| |||| ||||| |||| |||| | ||||||||||||||||| |||||| |||| ||||||| | |
|
|
| T |
28000096 |
catcaattcattgataagcttctccaaatcctctatcttcacattcatatcaatttccataccaatcttccattcattacaaataaatctacagtttgtt |
27999997 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||||||| || | || || |
|
|
| T |
27999996 |
ggctgatcagcaaaaaatgaccaacacaacattggcactccagcgcatatgctttcggtggttgagttccatccgcagtgagtcaagaacccgctgattg |
27999897 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttctttc |
384 |
Q |
| |
|
| ||||||||||| ||||||||||||||||||||| ||| |||||| ||||||||| ||||||||||| |
|
|
| T |
27999896 |
aagggtggttcaaaactttctcttgtggacaccaatttgatattaggcctctatctgaaatttctttc |
27999829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 401 - 486
Target Start/End: Original strand, 24103691 - 24103776
Alignment:
| Q |
401 |
aagggaacatagaatagaaagcattcataacatcactctcaagttcattagaagtattgaataccatagcagaagctctatgacat |
486 |
Q |
| |
|
||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||| || |||| ||| ||||| |||||| |
|
|
| T |
24103691 |
aagggaacatagagtagagagcattcataacatcactctcaagttcatatgaagtattgataacaatagaagaggctctgtgacat |
24103776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 399 - 448
Target Start/End: Original strand, 24107065 - 24107114
Alignment:
| Q |
399 |
aaaagggaacatagaatagaaagcattcataacatcactctcaagttcat |
448 |
Q |
| |
|
|||||||||||||||||||| | |||||| ||||||||||||||||||| |
|
|
| T |
24107065 |
aaaagggaacatagaatagagcgtattcattacatcactctcaagttcat |
24107114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 120; Significance: 4e-61; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 97 - 384
Target Start/End: Original strand, 3086535 - 3086822
Alignment:
| Q |
97 |
ttctttcctttatctcaggacatcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgc |
196 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||| ||||| || ||||| ||||| ||||| |||||||||| ||||||||| |||| ||||| |
|
|
| T |
3086535 |
ttctttcctttatctcccaccatcaattcattgatcagcttctcgacctcctctctcttcacattagtatcgatttcaattccaatctcccatatattgc |
3086634 |
T |
|
| Q |
197 |
aaatatatcttcagtttgctggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatg |
296 |
Q |
| |
|
| |||||||| |||||| ||| |||||| || |||||||||||||||||||||| ||||||||| || ||||||| |||||||||||||| ||||| |
|
|
| T |
3086635 |
agatatatctacagtttattggttgatctccataaaatggccaacacaacattggcactccagcaagtacgctttcaaccgttgagttccatccacaatg |
3086734 |
T |
|
| Q |
297 |
agtcaagaatccaccgactgatgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttctttc |
384 |
Q |
| |
|
||||||||||||||| | ||| ||||| |||||||||| |||||| |||||||| ||||| ||||| ||||||||| ||||||||||| |
|
|
| T |
3086735 |
agtcaagaatccaccaattgaagggtgattcaatacttgctcttgcggacaccagcttgcgattagacctctatctgaaatttctttc |
3086822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 117; Significance: 2e-59; HSPs: 2)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 19 - 380
Target Start/End: Complemental strand, 3812 - 3453
Alignment:
| Q |
19 |
gttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcaggac |
117 |
Q |
| |
|
|||||||||||||| ||| || ||||| |||| | |||| |||| ||||| | ||||| ||||||||||||| ||| |||||||||| |||| | |
|
|
| T |
3812 |
gttcatgtatgaacgaccacctggtctagtgttctcctctgccttcttctttaactccacggccttttgcctcatct---tctttcctttctctcccacc |
3716 |
T |
|
| Q |
118 |
atcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgctg |
217 |
Q |
| |
|
||||||||||||| || |||||||| || || ||||| |||| ||||||||| |||||||| |||||| ||||||||| |||| ||||||| || |
|
|
| T |
3715 |
gtcaattcattgactagcttctccacctcatctctcttcacatccatatcgatttcaagtccaatctcccattcgttgcaaataaatctacagtttgttg |
3616 |
T |
|
| Q |
218 |
gctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactga |
317 |
Q |
| |
|
||||||| |||| ||||||||||| | |||||| |||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| | ||| |
|
|
| T |
3615 |
gctgatcaccaaagaatggccaacaaagcattggtactccagcgcatatgctttcagtggttgaattccatccacaatgagtcaagaatccaccaattga |
3516 |
T |
|
| Q |
318 |
tgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttc |
380 |
Q |
| |
|
|||||| ||| ||||| ||||||||||||||| |||| ||||| ||||||||| ||||||| |
|
|
| T |
3515 |
agggtggatcagtacttgctcttgtggacaccagcttgtgattaggcctctatctgaaatttc |
3453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 492
Target Start/End: Complemental strand, 3156 - 3067
Alignment:
| Q |
403 |
gggaacatagaatagaaagcattcataacatcactctcaagttcattagaagtattgaataccatagcagaagctctatgacatttatct |
492 |
Q |
| |
|
||||||||||| | || ||||||| ||||||||||||||||||||| |||| || || || || ||||||||||| ||| ||| |||| |
|
|
| T |
3156 |
gggaacatagagtggagcgcattcagtacatcactctcaagttcattataagtgttaaaaacaattgcagaagctctgtgaaattgatct |
3067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 18 - 380
Target Start/End: Complemental strand, 4780 - 4420
Alignment:
| Q |
18 |
agttcatgtatgaacaacctccaggtctcgtgtccacctcctcctttttcttcagctccatggccttttgcctc-tctaattctttcctttatctcagga |
116 |
Q |
| |
|
|||||||||||||||| || |||| || |||| | |||| |||| ||||||| ||||||||||||||||||| ||| || |||||||||||| || |
|
|
| T |
4780 |
agttcatgtatgaacagccaccagaactggtgttctcctctgccttcttcttcaactccatggccttttgcctcatct---tcattcctttatctcccga |
4684 |
T |
|
| Q |
117 |
catcaattcattgaccagtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgct |
216 |
Q |
| |
|
|||||||||||||| || ||| || | ||| ||||| ||||| ||||| |||| | ||| ||| |||| || | | ||||| | |||||| | |
|
|
| T |
4683 |
catcaattcattgatcatattcgttaccttctctctcttcacattagtatcaatttccataccagtctcccatatatgggagatataccgatagtttgtt |
4584 |
T |
|
| Q |
217 |
ggctgatctgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactg |
316 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | || |
|
|
| T |
4583 |
ggctgatcggcgaaaaatggccaacacaacattggcactcctacacatatgctttcaatggttgagttccatccgcaatgagtcaagaatccaccaattg |
4484 |
T |
|
| Q |
317 |
atgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatcttaaatttc |
380 |
Q |
| |
|
| |||||||||| ||||| ||||||||||||||| || || ||||| ||||||||| ||||||| |
|
|
| T |
4483 |
aagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttc |
4420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 133 - 356
Target Start/End: Complemental strand, 3665 - 3443
Alignment:
| Q |
133 |
agtttctccacttcctccctctttacatttgtatcgattttgtttccaatcttccattcattgcaaatatatcttcagtttgctggctgatctgcaaaaa |
232 |
Q |
| |
|
||||||||||| ||||| ||||| ||||| | ||| |||| ||||||||| ||||||||| ||||| |||| ||||||| || || || | |||| |
|
|
| T |
3665 |
agtttctccacctcctctctcttcacattggaatctatttcacttccaatctcccattcattccaaatgcatctacagtttgttgagtgttcggggaaaa |
3566 |
T |
|
| Q |
233 |
atggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgatgggtggttcaatac |
332 |
Q |
| |
|
||||||||| || |||||||||||||| ||| ||||||||| |||||||||||||||| |||||||| ||||||||||| ||| | ||||||||||| || |
|
|
| T |
3565 |
atggccaacgcagcattggaactccagaacaaatgctttcaatggttgagttccatccacaatgagttaagaatccaccaact-aagggtggttcaacac |
3467 |
T |
|
| Q |
333 |
tttctcttgtggacaccaacttgc |
356 |
Q |
| |
|
|| ||||| |||||||| ||||| |
|
|
| T |
3466 |
ttgctcttacggacaccatcttgc |
3443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 373
Target Start/End: Complemental strand, 1351098 - 1351056
Alignment:
| Q |
331 |
actttctcttgtggacaccaacttgctattagtcctctatctt |
373 |
Q |
| |
|
|||||||||||||||||||||| | | |||||||||||||||| |
|
|
| T |
1351098 |
actttctcttgtggacaccaacctaccattagtcctctatctt |
1351056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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