View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1780_high_52 (Length: 202)
Name: NF1780_high_52
Description: NF1780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1780_high_52 |
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Alignment Details
Target: chr8 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 18417768 - 18417598
Alignment:
| Q |
17 |
aattcagagagtaatataaattcatactcatccctttcataactaatttgttttcaaatagaaaaaagtactaatactttagttcttttaaatggttaaa |
116 |
Q |
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| T |
18417768 |
aattcagagagtaatataaattcatactcatccctttcataactactttgttttcaaatagaaaaaagtactaatactttagttcttttaaatggttaaa |
18417669 |
T |
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| Q |
117 |
ttgttttttaactattattgatgaggagtatctattgatttttctcaaacctaattgaccagagtcttcat |
187 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18417668 |
ttgttttttaactattattgatgaggagtatctattgatttttctcaaacctaattgaccagagtcttcat |
18417598 |
T |
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