View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1780_low_33 (Length: 263)
Name: NF1780_low_33
Description: NF1780
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1780_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 23219329 - 23219085
Alignment:
| Q |
1 |
atcatccttttttataatagtcaatagatagaatagtagagcttcataaattgaagaatattgtgattgtaaacgcttgtcctgttttgctaaagtgctt |
100 |
Q |
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| T |
23219329 |
atcatcctttttgataatagtcaatagatagaatagtagagcttcataaattgaagaatattgtgattgtaaatgcttgtcctgttttgcttaagtgctt |
23219230 |
T |
|
| Q |
101 |
ttgagaatgaatgatttttataagtgtgtgatattaattcttcattaatcatgtgattattttaactagaagctattttttctgcagcttaaagagctaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
23219229 |
ttgagaatgaatgatttttataagtgtgtgatattaattcttcattaatcatgtgattattttaactggaagctattttttctgcagcttaaagagctaa |
23219130 |
T |
|
| Q |
201 |
atacaagaggatatgaagtcatactggtgacttcaggagcagttg |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23219129 |
atacaagaggatatgaagtcatactggtgacttcaggagcagttg |
23219085 |
T |
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