View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17811_high_31 (Length: 334)
Name: NF17811_high_31
Description: NF17811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17811_high_31 |
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Alignment Details
Target: chr8 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 9 - 322
Target Start/End: Original strand, 42336143 - 42336456
Alignment:
| Q |
9 |
ttctgttctgtgctctgcttctctatttactgccaaaagacaaattaacagcttagcatctaagccatatattaatatttatttactagagcaatataat |
108 |
Q |
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| T |
42336143 |
ttctgttctgtgctctgcttctctatttactgccaaaagacaaattaacagcttagcatctaagccatatattaatatttatttactagagcaatataat |
42336242 |
T |
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| Q |
109 |
taaatgcttaagcttgactcactgcctgtggttttaattttatcttctgcgtgaaactgtcaaatttgatagagacataagtatacagattatttatgat |
208 |
Q |
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| T |
42336243 |
taaatgcttaagcttgactcactgcctgtggttttaattttatcttctgcgtgaaactgtcaaatttgatagagacataagtatacagattatttatgat |
42336342 |
T |
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| Q |
209 |
acttttgcacttgcactccgactcactaagattcctgttcccatctctcaaaaataaaaataactttattttttgagatttcaagtatctgctgtgtcaa |
308 |
Q |
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| T |
42336343 |
acttttgcacttgcactccgactcactaagattcctgttcccatctctcaaaaataaaaataactttattttttgagatttcaagtatctgctgtgtcaa |
42336442 |
T |
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| Q |
309 |
cagaattacaacat |
322 |
Q |
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|||||||||||||| |
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| T |
42336443 |
cagaattacaacat |
42336456 |
T |
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