View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17811_high_43 (Length: 274)
Name: NF17811_high_43
Description: NF17811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17811_high_43 |
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Alignment Details
Target: chr2 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 7552387 - 7552130
Alignment:
| Q |
1 |
accatttgattaaacgacgacaaaagtactcaaacgacacaaacaagctgtgacagtgttttgtcaaattcgacactgaatcgaggaaaaacatcacttg |
100 |
Q |
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| T |
7552387 |
accatttgattaaacgacgacaaaagtactcaaacgacacaaacaagctgtgacagtgttttgtcaaattcgacactgaatcgaggaaaaacatcacttg |
7552288 |
T |
|
| Q |
101 |
aaaccaaccatgtcgtgttgtttatcatgctgcacatctttaacttgtggtctctgtacctctgtagcatctgggatctcacaaaaatcagctagaatcg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7552287 |
aaaccaaccatgtcgtgttgtttatcatgctgcacatctttaacttgtggtctctgtacctctgtagcatctgggatctcacaaaaatcagctagaatcg |
7552188 |
T |
|
| Q |
201 |
gttactgttttctctttggtgcgtctcttatagtttcttggattcttagagaagttgg |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7552187 |
gttactgttttctctttggtgcgtctcttatagtttcttggattcttagagaagttgg |
7552130 |
T |
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