View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17811_high_54 (Length: 244)
Name: NF17811_high_54
Description: NF17811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17811_high_54 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 11 - 226
Target Start/End: Complemental strand, 38832775 - 38832560
Alignment:
| Q |
11 |
cagagatgatgcaagaagaagatccatgcatgaatctagctaccatatataattaaattatatattatgatggtaaacaaaacaatgcacacccgtgcga |
110 |
Q |
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| T |
38832775 |
cagagatgatgcaagaagaacatccatgcatgaatctagctaccatatataattaaattatatattatgatggtaaacaaaacaatgcacacccgtgcga |
38832676 |
T |
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| Q |
111 |
attagtagacacatgctttacttaataaataatcggaaactttggtcataagtattatgaaattcatggttgaagacaagcgggttttcatggaatgatg |
210 |
Q |
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| T |
38832675 |
attagtagacacatgctttacttaataaataatcggaaactttggtcataagtattgtgaaattcatggttgaagacaagcgggttttcatggaatgatg |
38832576 |
T |
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| Q |
211 |
cattgtatatggagca |
226 |
Q |
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| T |
38832575 |
cattgtatatggagca |
38832560 |
T |
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