View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17811_high_64 (Length: 218)
Name: NF17811_high_64
Description: NF17811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17811_high_64 |
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Alignment Details
Target: chr5 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 41705094 - 41705282
Alignment:
| Q |
13 |
aataatattttcatagttgtttctgacatagaatcaatgaaatcagatgagttttggaggcaaaaagactaagatttggattgcaaatatgcacaacagt |
112 |
Q |
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| T |
41705094 |
aataatattttcatagttgtttttgacatagaatcaatgaaatcagatgagttttggaggcaaaaagactaagatttggattgcaaatatgcacaacagt |
41705193 |
T |
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| Q |
113 |
atgtacggccttatatagcaccctgaaataaacatttggggatgaaaacacgtttgcatgaggactaccaggactgtgcgtaggggtga |
201 |
Q |
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| T |
41705194 |
atgtacggccttatatagcaccctgaaataaacatttggggatgaaaacacatttgcatgaggactaccaggactgtgcgtaggggtga |
41705282 |
T |
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