View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17811_low_36 (Length: 329)

Name: NF17811_low_36
Description: NF17811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17811_low_36
NF17811_low_36
[»] chr4 (19 HSPs)
chr4 (67-148)||(30961905-30961986)
chr4 (1-69)||(8740450-8740518)
chr4 (1-69)||(46494460-46494528)
chr4 (5-69)||(36192543-36192607)
chr4 (1-69)||(39863840-39863908)
chr4 (1-69)||(51066495-51066563)
chr4 (2-69)||(32139166-32139233)
chr4 (1-69)||(51714027-51714095)
chr4 (1-69)||(30970446-30970514)
chr4 (1-69)||(50905750-50905818)
chr4 (2-60)||(50399705-50399763)
chr4 (1-69)||(7173647-7173715)
chr4 (1-42)||(29576444-29576485)
chr4 (13-69)||(2294784-2294840)
chr4 (2-69)||(22423378-22423445)
chr4 (1-43)||(41523425-41523467)
chr4 (1-43)||(55231715-55231757)
chr4 (5-38)||(4080618-4080651)
chr4 (11-69)||(47627065-47627125)
[»] chr8 (17 HSPs)
chr8 (1-69)||(19723313-19723381)
chr8 (1-69)||(4840142-4840210)
chr8 (1-69)||(27881050-27881118)
chr8 (1-69)||(28021231-28021299)
chr8 (1-69)||(32296701-32296769)
chr8 (1-69)||(11404003-11404071)
chr8 (5-53)||(17095568-17095616)
chr8 (2-69)||(29767190-29767255)
chr8 (2-56)||(24475059-24475113)
chr8 (1-42)||(21355046-21355087)
chr8 (1-68)||(28739623-28739690)
chr8 (1-38)||(36261679-36261716)
chr8 (1-41)||(22711539-22711579)
chr8 (5-38)||(43288105-43288138)
chr8 (2-69)||(41553287-41553354)
chr8 (2-68)||(30682842-30682908)
chr8 (1-69)||(11610282-11610350)
[»] chr3 (16 HSPs)
chr3 (1-69)||(7417800-7417868)
chr3 (1-69)||(8400857-8400925)
chr3 (1-69)||(22855889-22855957)
chr3 (1-69)||(50823700-50823768)
chr3 (1-69)||(50852092-50852160)
chr3 (1-69)||(35198767-35198835)
chr3 (1-69)||(43334116-43334184)
chr3 (1-69)||(55468001-55468069)
chr3 (1-56)||(29635883-29635938)
chr3 (1-42)||(22371791-22371832)
chr3 (1-69)||(34824558-34824626)
chr3 (1-69)||(48078003-48078071)
chr3 (3-60)||(52545332-52545389)
chr3 (3-69)||(50726061-50726127)
chr3 (3-69)||(50786721-50786787)
chr3 (1-57)||(42876229-42876285)
[»] chr2 (21 HSPs)
chr2 (1-69)||(45137032-45137100)
chr2 (1-69)||(25987724-25987792)
chr2 (1-69)||(40156042-40156110)
chr2 (1-69)||(17136389-17136457)
chr2 (1-69)||(21637899-21637967)
chr2 (6-69)||(6672860-6672923)
chr2 (1-69)||(10745294-10745362)
chr2 (1-69)||(36836391-36836459)
chr2 (2-68)||(3200884-3200950)
chr2 (1-69)||(44650395-44650463)
chr2 (2-69)||(26690156-26690223)
chr2 (1-69)||(2754113-2754181)
chr2 (1-69)||(5039422-5039490)
chr2 (1-69)||(36380194-36380262)
chr2 (2-69)||(7860209-7860276)
chr2 (1-49)||(558501-558549)
chr2 (5-69)||(2357141-2357205)
chr2 (1-69)||(30372742-30372810)
chr2 (10-69)||(13047224-13047281)
chr2 (1-69)||(33066592-33066660)
chr2 (1-56)||(20961496-20961551)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-69)||(107753-107821)
[»] chr7 (15 HSPs)
chr7 (1-69)||(16059415-16059483)
chr7 (1-69)||(35109693-35109761)
chr7 (1-69)||(38265299-38265367)
chr7 (1-69)||(12472123-12472191)
chr7 (1-69)||(34721836-34721904)
chr7 (1-69)||(41151174-41151243)
chr7 (1-69)||(11216771-11216839)
chr7 (1-69)||(18117006-18117074)
chr7 (1-69)||(21577160-21577228)
chr7 (1-69)||(45278454-45278522)
chr7 (2-69)||(48176401-48176468)
chr7 (1-53)||(37095272-37095324)
chr7 (1-57)||(38405216-38405272)
chr7 (5-58)||(245330-245383)
chr7 (2-69)||(23028685-23028752)
[»] chr1 (13 HSPs)
chr1 (5-69)||(30054508-30054572)
chr1 (1-69)||(30370122-30370190)
chr1 (1-69)||(4573381-4573449)
chr1 (5-69)||(20014460-20014524)
chr1 (1-69)||(45324008-45324076)
chr1 (3-69)||(12025183-12025249)
chr1 (1-69)||(30850902-30850970)
chr1 (2-58)||(33763317-33763373)
chr1 (1-42)||(14498141-14498182)
chr1 (2-59)||(44438613-44438670)
chr1 (5-69)||(21090117-21090181)
chr1 (1-53)||(22024121-22024173)
chr1 (2-43)||(33762603-33762644)
[»] chr5 (3 HSPs)
chr5 (1-69)||(17064325-17064393)
chr5 (1-68)||(20983065-20983132)
chr5 (1-69)||(37976548-37976620)
[»] chr6 (9 HSPs)
chr6 (1-69)||(19686889-19686957)
chr6 (1-69)||(35163812-35163880)
chr6 (1-50)||(20685346-20685395)
chr6 (17-69)||(14496354-14496406)
chr6 (1-66)||(2711796-2711861)
chr6 (5-69)||(14505590-14505653)
chr6 (2-43)||(15070153-15070194)
chr6 (1-49)||(17948702-17948750)
chr6 (2-39)||(24336647-24336684)
[»] scaffold0691 (1 HSPs)
scaffold0691 (2-71)||(7032-7101)


Alignment Details
Target: chr4 (Bit Score: 74; Significance: 6e-34; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 67 - 148
Target Start/End: Original strand, 30961905 - 30961986
Alignment:
Q  67 ctcttgatgactttgtaatgtaatcagtctctcttgacttttaacacttagtattagtgtgtattttgatgttactttattt 148  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30961905 ctcttgatgactttgcaatgtaatcaatctctcttgacttttaacacttagtattagtgtgtattttgatgttactttattt 30961986  T

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Target: chr4; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8740518 - 8740450
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  8740518 gcacttacaaaggtatttacatttacctccctccaaaggcactagcggggctcgaacccgggatctctc 8740450  T

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Target: chr4; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 46494460 - 46494528
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  46494460 gcacttacaaaggtatttacatttacctccctccaaaggcactagtggggctcgaacccgggttctctc 46494528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 36192607 - 36192543
Alignment:
Q  5 ttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  36192607 ttacaaaagtaattacatttacctccctccaaaggcactagtggggctcgaacccgggttctctc 36192543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 39863840 - 39863908
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||    
T  39863840 gcacttacaaaggtaattacatttacttccctccaaaggcactagcggggtccgaacccgggttctctc 39863908  T

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Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 51066563 - 51066495
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  51066563 gcacttacaaaggtaattatatttacctccctccaaaggcactagcggagctcgaacccgagttctctc 51066495  T

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Target: chr4; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 32139233 - 32139166
Alignment:
Q  2 cacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||| |||||||||    
T  32139233 cacttacaaaggtaattacatttacctccctccaaagacactagcggggttcgaacccaggttctctc 32139166  T

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Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 51714027 - 51714095
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| ||| |||||||||||| |||||||||| | |||||||||||||||||||||||    
T  51714027 gcacttacaaaggtatttatatttacctcccttcaaaggcactagtggggctcgaacccgggttctctc 51714095  T

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Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 30970446 - 30970514
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| |||||||||||||||| |||||||||| | | ||||||||||||| |||||||    
T  30970446 gcacttacaaaggtatttacatttacctcccttcaaaggcactagtgaggctcgaacccggattctctc 30970514  T

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Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 50905818 - 50905750
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||| ||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| | |||||||    
T  50905818 gcacctacaaagataattacatttacctctctccaaaggcactagcggggctcgaacccagattctctc 50905750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 50399705 - 50399763
Alignment:
Q  2 cacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccg 60  Q
    |||||||||||||| |||||||||||| |||||||  ||||| ||||||||||||||||    
T  50399705 cacttacaaaggtatttacatttaccttcctccaagagcactagcggggctcgaacccg 50399763  T

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Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7173647 - 7173715
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| | |||||||||||| |||||||||||| ||||| || |||||  |||||||||    
T  7173647 gcacttacaaaggtattgacatttacctccttccaaaggcactagcgggtcttgaacctaggttctctc 7173715  T

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Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 29576485 - 29576444
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcac 42  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  29576485 gcacttacaaagttatttacatttacctccctccaaaggcac 29576444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 2294784 - 2294840
Alignment:
Q  13 gtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||||||| |||||||||||||| |||   |||||||||| ||||||||    
T  2294784 gtaattacatttaccttcctccaaaggcactagcgaaactcgaacccgagttctctc 2294840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 22423445 - 22423378
Alignment:
Q  2 cacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||| ||| ||||||||||||||||||||||| |||  | ||||||||| ||| | ||||||    
T  22423445 cacttacaaaagtatttacatttacctccctccaaaggtactaaccgggctcgaatccgagatctctc 22423378  T

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Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41523467 - 41523425
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcact 43  Q
    ||||||| ||||||| |||||||||||||||||||||| ||||    
T  41523467 gcacttataaaggtatttacatttacctccctccaaagacact 41523425  T

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Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 55231757 - 55231715
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcact 43  Q
    ||||||||||| ||| |||||||||||||||| ||||||||||    
T  55231757 gcacttacaaaagtatttacatttacctcccttcaaaggcact 55231715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 4080618 - 4080651
Alignment:
Q  5 ttacaaaggtaattacatttacctccctccaaag 38  Q
    ||||||| ||||||||||||||||||||||||||    
T  4080618 ttacaaatgtaattacatttacctccctccaaag 4080651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 47627065 - 47627125
Alignment:
Q  11 aggtaattacatttacctccctccaaaggcactggcgggg--ctcgaacccgggttctctc 69  Q
    ||||| |||||||||||||||| |||||||||| | ||||  |||||| ||||||||||||    
T  47627065 aggtatttacatttacctcccttcaaaggcactagtggggctctcgaatccgggttctctc 47627125  T

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Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19723381 - 19723313
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  19723381 gcacttacaaaggtaattacatttacctccctccaaaggcactagcggggctcgaacccgggttctctc 19723313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 4840210 - 4840142
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4840210 gcacttacaatggtaatgacatttacctccctccaaaggcactagcggggctcgaacccgggttctctc 4840142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 27881050 - 27881118
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  27881050 gcacttacaaaggtatttacatttacctcccttcaaaggcactagcggggctcgaacccgggttctctc 27881118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 28021231 - 28021299
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  28021231 gcacttacaaaggtatttacatttacctcccttcaaaggcactagcggggctcgaacccgggttctctc 28021299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 32296701 - 32296769
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||||||||||||||||||||||| |||||||||| || ||||| ||||||||||||||||    
T  32296701 gcacttacaaaggtaattacatttacctcccttcaaaggcactagcagggcttgaacccgggttctctc 32296769  T

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Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11404071 - 11404003
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| |||||||||||||||||||||| |||| ||| ||||||||||| |||||||||    
T  11404071 gcacttacaaaggtatttacatttacctccctccaaagacactagcgaggctcgaacccaggttctctc 11404003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 17095616 - 17095568
Alignment:
Q  5 ttacaaaggtaattacatttacctccctccaaaggcactggcggggctc 53  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17095616 ttacaaaggtaattacatttacctccctccaaaggcactagcggggctc 17095568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 29767255 - 29767190
Alignment:
Q  2 cacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||||||  ||||||||||| |||||||||| ||||||||||| |||||||||||||    
T  29767255 cacttacaaaggtaatta--tttacctcccttcaaaggcactagcggggctcgaccccgggttctctc 29767190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 24475059 - 24475113
Alignment:
Q  2 cacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaa 56  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  24475059 cacttacaaaggtatttacatttacctccctccaaaggcactagcggagctcgaa 24475113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21355046 - 21355087
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  21355046 gcacttacaaaggtaattacatttacctccctccaaaggcac 21355087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 28739623 - 28739690
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctct 68  Q
    ||||||||||||||| |||||||||| | |||||||||||||| | |||||| |||||| ||||||||    
T  28739623 gcacttacaaaggtatttacatttactttcctccaaaggcactagtggggcttgaacccaggttctct 28739690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36261716 - 36261679
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaag 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36261716 gcacttacaaaggtaattacatttacctccctccaaag 36261679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22711579 - 22711539
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggca 41  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  22711579 gcacttacaaaggtatttacatttacctccctccaaaggca 22711539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 43288138 - 43288105
Alignment:
Q  5 ttacaaaggtaattacatttacctccctccaaag 38  Q
    ||||||||||||||||||||||||||||||||||    
T  43288138 ttacaaaggtaattacatttacctccctccaaag 43288105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 41553354 - 41553287
Alignment:
Q  2 cacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||||| |||||||||| | ||||||||| || | | ||| ||||||| |||||||||||    
T  41553354 cacttacaaaggtatttacatttacgttcctccaaagacattagtgggactcgaactcgggttctctc 41553287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 30682908 - 30682842
Alignment:
Q  2 cacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctct 68  Q
    |||||||||| ||| ||||||||| ||| ||||||||||||  | ||||||||||| |||| |||||    
T  30682908 cacttacaaaagtatttacatttatctctctccaaaggcaccagtggggctcgaacacgggctctct 30682842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11610350 - 11610282
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||| || ||| ||||||||  ||||||||||||| ||| |||||||| ||| | ||||||    
T  11610350 gcacttacaaagatatttatatttacctttctccaaaggcactagcgaggctcgaatccgagatctctc 11610282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 7417868 - 7417800
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7417868 gcacttacaaaggtaattacatttacctccctccaaaggcactagcggggctcgaacccgggttctctc 7417800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8400925 - 8400857
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8400925 gcacttacaaaggtaattacatttacctccctccaaaggcactagcggggctcgaacccgggttctctc 8400857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 22855957 - 22855889
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||    
T  22855957 gcacttacaaaggtaattacatttacctccctccaaagacactagcggggctcgaacctgggttctctc 22855889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 50823768 - 50823700
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| |||||||    
T  50823768 gcacttacaaaggtaattacatttacctccctccaaaggcactaacgggactcgaacccggattctctc 50823700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 50852092 - 50852160
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| |||||||    
T  50852092 gcacttacaaaggtaattacatttacctccctccaaaggcactaacgggactcgaacccggattctctc 50852160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 35198835 - 35198767
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| |||||||||||||||| |||||||| | | |||||||||||||||||||||||    
T  35198835 gcacttacaaaggtatttacatttacctccctgcaaaggcattagtggggctcgaacccgggttctctc 35198767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43334116 - 43334184
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||| ||| |||||||||||||||||| ||| |||| ||||||||||||| |||||||||||    
T  43334116 gcacttacaaaagtatttacatttacctccctcccaagacactagcggggctcgaactcgggttctctc 43334184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 55468069 - 55468001
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| ||||||||||||||||||||| ||| | | ||||||||||||||| |||||||    
T  55468069 gcacttacaaaggtatttacatttacctccctccaaacgcattagtggggctcgaacccggattctctc 55468001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29635938 - 29635883
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaa 56  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||    
T  29635938 gcacttacaaaggtaattacatttacctcccttcaaaggcactagcgaggctcgaa 29635883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22371791 - 22371832
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  22371791 gcacttacaaaggtaattacatttacctccctccaaaggcac 22371832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 34824626 - 34824558
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||| ||||||||||||||||||| ||||||||||  |||| ||||||| | |||||||||    
T  34824626 gcacttacaaagataattacatttacctcccttcaaaggcactaacgggactcgaactcaggttctctc 34824558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 48078003 - 48078071
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||| || |||||||||||| |||||||||||||| | | |||||||||||| ||||||||    
T  48078003 gcacttacaaagatatttacatttaccttcctccaaaggcactagtgaggctcgaacccgagttctctc 48078071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 52545389 - 52545332
Alignment:
Q  3 acttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccg 60  Q
    ||||||||| ||| ||||||||||||||||  ||||||||| ||||||||||||||||    
T  52545389 acttacaaaagtatttacatttacctccctttaaaggcactagcggggctcgaacccg 52545332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 50726061 - 50726127
Alignment:
Q  3 acttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||| ||||||| |||||||| ||||||||| ||||  |||||||||||||||  |||||||    
T  50726061 acttacaaaagtaattatatttaccttcctccaaagacactaacggggctcgaacccgaattctctc 50726127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 50786787 - 50786721
Alignment:
Q  3 acttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||| ||||||| |||||||| ||||||||| ||||  |||||||||||||||  |||||||    
T  50786787 acttacaaaagtaattatatttaccttcctccaaagacactaacggggctcgaacccgaattctctc 50786721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 42876285 - 42876229
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaac 57  Q
    |||||||||||||||||||||||||||||| || |||| |||| |  ||||||||||    
T  42876285 gcacttacaaaggtaattacatttacctccatctaaagacactagtcgggctcgaac 42876229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 45137032 - 45137100
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  45137032 gcacttacaaaggtaattacatttacctccctccaaaggcactagcggggctcgaacccgggttctctc 45137100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 25987724 - 25987792
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  25987724 gcacttacaaaggtaattacatttacctccctccaaaggcactagcggggctcgaacccgagttctctc 25987792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 40156110 - 40156042
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  40156110 gcacttacaaaggtaattacatttacctccctccaaaggcactagcggggctcgaacccggattctctc 40156042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 17136457 - 17136389
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  17136457 gcacttacaaaggtatttacatttacctccctccaaaggcactaacggggctcgaacccgggttctctc 17136389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21637967 - 21637899
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  21637967 gcacttacaaaggtatttacatttacctccctccaaaggcactagcggggctcaaacccgggttctctc 21637899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 6672860 - 6672923
Alignment:
Q  6 tacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  6672860 tacaaaggtaattacatttacctccctccaaaggcactagcggggcttgaacccgggttctctc 6672923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10745294 - 10745362
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||| |||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  10745294 gcacttacaaagataattacatttacctccctctaaaggcactagcggggctcggacccgggttctctc 10745362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 36836391 - 36836459
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||| |||||||||||    
T  36836391 gcacttacaaaggtaattacatttacctccctccaaaggcaccagcgggactcgaactcgggttctctc 36836459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 3200950 - 3200884
Alignment:
Q  2 cacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctct 68  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||| || ||||||||    
T  3200950 cacttacaaaggtaattacatttacctccctccaaaggcactagcgaggctcgaatccaggttctct 3200884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 44650463 - 44650395
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||| |||||||  |||||||||||    
T  44650463 gcacttacaaaggtaattacatttacctccctccaaaggcactaacggagctcgaaatcgggttctctc 44650395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 26690223 - 26690156
Alignment:
Q  2 cacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| | |||||||    
T  26690223 cacttacaaaggtaattacatttacctccctccaaaagcactagcgggactcgaacccagattctctc 26690156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2754113 - 2754181
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| ||||||||||||||||||||||||| | | ||| |||||| ||||||||||||    
T  2754113 gcacttacaaaggtatttacatttacctccctccaaaggcattagtgggactcgaatccgggttctctc 2754181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5039490 - 5039422
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||||||||||| |||||||||||| ||| ||||| |||| ||||||||||| ||||||||    
T  5039490 gcacttacaaaggtaattacgtttacctccctctaaaagcactagcggagctcgaacccgagttctctc 5039422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 36380194 - 36380262
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||| || |||||| ||| ||||    
T  36380194 gcacttacaaagggaattacatttacctccctccaaaggcactagcggggttcaaacccgagttttctc 36380262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 7860209 - 7860276
Alignment:
Q  2 cacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||| |||  |||||||||||||||||||||||||| ||||||||| ||||| |||||||||    
T  7860209 cacttacaaatgtatgtacatttacctccctccaaaggcactagcggggctcaaacccaggttctctc 7860276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 558501 - 558549
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggg 49  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  558501 gcacttacaaaagtaattacatttacctccctccaaaggcactagcggg 558549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 2357141 - 2357205
Alignment:
Q  5 ttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||| |||| ||||||||||||||||||||||| ||| | ||  |||||||||||||||||||    
T  2357141 ttacaatggtatttacatttacctccctccaaaggtactagtggaactcgaacccgggttctctc 2357205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 30372742 - 30372810
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||| |||||| || |||||||||||||| |||||||||||| |||| |||||||||| || ||||||    
T  30372742 gcactaacaaagatatttacatttacctccttccaaaggcactagcggagctcgaacccaggatctctc 30372810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 13047224 - 13047281
Alignment:
Q  10 aaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||| ||||||||||||||||||  ||  ||||||||||||||||| |||||||    
T  13047224 aaggtaattatatttacctccctccaaag--acatgcggggctcgaacccggattctctc 13047281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33066660 - 33066592
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||| || ||||||||||||| |||||||| |||| | |  |||||||||||| |||||||    
T  33066660 gcacttacaaagatatttacatttacctctctccaaagacactagtgaagctcgaacccggattctctc 33066592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 20961551 - 20961496
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaa 56  Q
    ||||||||||| | | |||||||||||||||||||| |||||| |||| |||||||    
T  20961551 gcacttacaaatggatttacatttacctccctccaagggcactagcggagctcgaa 20961496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 107753 - 107821
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  107753 gcacttacaaaggtaattacatttacctccctccaaaggcactagcggggctcgaactcgggttctctc 107821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 4e-26; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16059415 - 16059483
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  16059415 gcacttacaaaggtaattacatttacctccctgcaaaggcactagcggggctcgaacccgggttctctc 16059483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 35109761 - 35109693
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  35109761 gcacttacaaaggtaattacatttacctccctccaaaggcactagtggggctcgaacccgggttctctc 35109693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 38265299 - 38265367
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  38265299 gcacttacaaaggtaattacatttacctccctccaaaggcactagcggggctcgaacccaggttctctc 38265367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12472191 - 12472123
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||    
T  12472191 gcacttacaaaggtaattatatttacctccctccaaaggcactagtggggctcgaacccgggttctctc 12472123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 34721904 - 34721836
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||    
T  34721904 gcacttacaaaggtaattacatttacctccctccaaaggcactagcggggcttgaatccgggttctctc 34721836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 41151243 - 41151174
Alignment:
Q  1 gcacttacaaa-ggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  41151243 gcacttacaaaaggtaattacatttacctccctccaaagacactagcggggctcgaacccgggttctctc 41151174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11216839 - 11216771
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  11216839 gcacttacaaaggtatttacatttacctccctccaaaggcactaatggggctcgaacccgggttctctc 11216771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 18117006 - 18117074
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||| |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  18117006 gcacctacaaaggtaattacatttacctccctctaaaggcactagcgtggctcgaacccgggttctctc 18117074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21577160 - 21577228
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| ||||||||||||||||||||||||| | | |||||||||||||||||||||||    
T  21577160 gcacttacaaaggtatttacatttacctccctccaaaggcattagtggggctcgaacccgggttctctc 21577228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 45278522 - 45278454
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||||||||||| ||||    
T  45278522 gcacttacaaagataattacatttacttcccttcaaaggcactagcggggctcgaacccgggttatctc 45278454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 48176468 - 48176401
Alignment:
Q  2 cacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||| ||| |||||||||||||| |||||||||||| ||||||||||||||||| |||||||    
T  48176468 cacttacaaaagtatttacatttacctccttccaaaggcactagcggggctcgaacccggattctctc 48176401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37095272 - 37095324
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctc 53  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  37095272 gcacttacaaaggtaattacatttacctccctccaaagacactagcggggctc 37095324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 38405216 - 38405272
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaac 57  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||    
T  38405216 gcacttacaaagataattacatttacctccctccaaaggcactagcgaggctcgaac 38405272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 245330 - 245383
Alignment:
Q  5 ttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacc 58  Q
    |||||||| ||||||||||||||||||||||| |||||| ||||||||||||||    
T  245330 ttacaaagataattacatttacctccctccaagggcactagcggggctcgaacc 245383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 23028752 - 23028685
Alignment:
Q  2 cacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||| |||||||||||||||||| |||||| ||||||| | | || | |||||||||| |||||||    
T  23028752 cacttataaaggtaattacatttacatccctctaaaggcattagaggagttcgaacccggattctctc 23028685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 30054508 - 30054572
Alignment:
Q  5 ttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30054508 ttacaaaggtaattacatttacctccctccaaaggcactagcggggctcgaacccgggttctctc 30054572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 30370122 - 30370190
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||    
T  30370122 gcacttacaaaggtaattacatttacctccctccaaagacactagtggggctcgaacccggattctctc 30370190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 4573449 - 4573381
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| |||||||||||||||||||||| || | | |||||||||||||||||||||||    
T  4573449 gcacttacaaaggtatttacatttacctccctccaaagacattagtggggctcgaacccgggttctctc 4573381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 20014524 - 20014460
Alignment:
Q  5 ttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  20014524 ttacaaatgtaattacatttacctccctccaaaggtactagcgggactcgaacccgggttctctc 20014460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 45324076 - 45324008
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| ||||||||||||||||||||| ||||| |||||||| |||||| |||||||||    
T  45324076 gcacttacaaaggtatttacatttacctccctccaaaagcactagcggggctggaacccaggttctctc 45324008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 12025249 - 12025183
Alignment:
Q  3 acttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||||||||||||||||| ||||||||||||||   ||||||||||||| |||||||||    
T  12025249 acttacaaaggtaattacatttaccttcctccaaaggcactaatggggctcgaacccaggttctctc 12025183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 30850902 - 30850970
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||| ||||| |||||||||||||||||| ||||  ||||||||||||||| ||||||||    
T  30850902 gcacttacaaaggcaattatatttacctccctccaaagacactaacggggctcgaacccgagttctctc 30850970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 33763317 - 33763373
Alignment:
Q  2 cacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacc 58  Q
    ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  33763317 cacttacaaaggtaattacatttgcctccctctaaaggcactagcggggctcgaacc 33763373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14498141 - 14498182
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcac 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14498141 gcacttacaaaggtaattacatttacctccctccaaaggcac 14498182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 44438613 - 44438670
Alignment:
Q  2 cacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaaccc 59  Q
    |||||||||| ||||||||||||||||||||||||||||| | |||| ||||||||||    
T  44438613 cacttacaaaagtaattacatttacctccctccaaaggcattagcggagctcgaaccc 44438670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 21090181 - 21090117
Alignment:
Q  5 ttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||| ||| |||||||||||||||||||| |||||| ||||||||||||||||  |||||||    
T  21090181 ttacaaatgtatttacatttacctccctccaacggcactagcggggctcgaacccgaattctctc 21090117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 22024173 - 22024121
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctc 53  Q
    |||||||||||||||||||||||||||||| |||||||||||| || ||||||    
T  22024173 gcacttacaaaggtaattacatttacctccatccaaaggcactagcagggctc 22024121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 33762603 - 33762644
Alignment:
Q  2 cacttacaaaggtaattacatttacctccctccaaaggcact 43  Q
    ||||||||||||||||||||||| |||||||| |||||||||    
T  33762603 cacttacaaaggtaattacatttgcctccctctaaaggcact 33762644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 9e-24; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 17064393 - 17064325
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  17064393 gcacttacaaaggtatttacatttacctccctccaaaggcactagcgaggctcgaacccgggttctctc 17064325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20983065 - 20983132
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctct 68  Q
    ||||||||||| |||||| |||||||||| |||| |||||||| ||||||||||||||||| ||||||    
T  20983065 gcacttacaaatgtaattgcatttacctctctccgaaggcactagcggggctcgaacccggattctct 20983132  T

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Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37976620 - 37976548
Alignment:
Q  1 gcacttacaaaggtaattacatt----tacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| |||||||    ||||||||| |||| ||||| ||||||||||||||| |||||||||    
T  37976620 gcacttacaaaggtatttacattaatttacctcccttcaaatgcactagcggggctcgaacccaggttctctc 37976548  T

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Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 19686889 - 19686957
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| |||||||||    
T  19686889 gcacttacaaaggtaattacatttacctccctacaaaggcactagaggggctcgaacccaggttctctc 19686957  T

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Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 35163812 - 35163880
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||| ||||||||||||||||||||||||| | | ||||||||||||| |||||||||    
T  35163812 gcacttacaaaggtatttacatttacctccctccaaaggcattagtggggctcgaaccctggttctctc 35163880  T

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Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 20685395 - 20685346
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcgggg 50  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20685395 gcacttacaaaggtaattacatttacctccctccaaaggcactagcgggg 20685346  T

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Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 14496406 - 14496354
Alignment:
Q  17 ttacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  14496406 ttacatttacctccctccaaaggcactagtggggctcgaacccgggttctctc 14496354  T

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Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2711796 - 2711861
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttct 66  Q
    ||||||||||||||| ||||||||||||||||||||| ||||| | |||||||||| || ||||||    
T  2711796 gcacttacaaaggtatttacatttacctccctccaaaagcactagtggggctcgaatccaggttct 2711861  T

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Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 14505590 - 14505653
Alignment:
Q  5 ttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctc 69  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||||||||||||  |||| ||||||    
T  14505590 ttacaaaggta-ttacatttacctccctccaaaagcactagcggggctcgaattcgggatctctc 14505653  T

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Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 15070194 - 15070153
Alignment:
Q  2 cacttacaaaggtaattacatttacctccctccaaaggcact 43  Q
    |||||||||| ||||||| |||||||||||||||||||||||    
T  15070194 cacttacaaatgtaattatatttacctccctccaaaggcact 15070153  T

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Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17948750 - 17948702
Alignment:
Q  1 gcacttacaaaggtaattacatttacctccctccaaaggcactggcggg 49  Q
    ||||||||||||||| ||||||||||||| |||||||| |||| |||||    
T  17948750 gcacttacaaaggtatttacatttacctctctccaaagacactagcggg 17948702  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 24336684 - 24336647
Alignment:
Q  2 cacttacaaaggtaattacatttacctccctccaaagg 39  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  24336684 cacttacaaaagtatttacatttacctccctccaaagg 24336647  T

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Target: scaffold0691 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0691
Description:

Target: scaffold0691; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 7032 - 7101
Alignment:
Q  2 cacttacaaaggtaattacatttacctccctccaaaggcactggcggggctcgaacccgggttctctctt 71  Q
    ||||| ||||||||||||||||||| |||||||||| ||||| ||||| ||||||||||| |||||||||    
T  7032 cacttgcaaaggtaattacatttacttccctccaaacgcactagcgggactcgaacccggattctctctt 7101  T

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