View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17812_high_4 (Length: 279)
Name: NF17812_high_4
Description: NF17812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17812_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 13 - 262
Target Start/End: Original strand, 45307484 - 45307732
Alignment:
| Q |
13 |
atactatactataccattgcataatgttgcccgtgaatctttaatttgatgattacatgtatctactttctcctagagttctgcagcagagtttgtaaaa |
112 |
Q |
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| T |
45307484 |
atactatactataccattgcataatgttgcccgtgaatctttaatttgatgattacatgtatctactttctcctagagttatgcagcagagtttgtaaaa |
45307583 |
T |
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| Q |
113 |
ctaattagnnnnnnnnnnnnnnnnnnnnngccaacaaagttattaaataaagagactctttcaatctgtgagctgtgtagtgttaaaaatcaattgaaat |
212 |
Q |
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| T |
45307584 |
ctaattagtttttatttttatttttttt-gccaacaaagtaattaaataaagagactctttcaatttgtgagctgtgtagtgttaaaaatcaattgaaat |
45307682 |
T |
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| Q |
213 |
aggtaacgattaaatttggtacatgcattgggaaaagggtagatactata |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45307683 |
aggtaacgattaaatttggtacatgcattgggaaaagggtagatactata |
45307732 |
T |
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