View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17812_low_1 (Length: 619)

Name: NF17812_low_1
Description: NF17812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17812_low_1
NF17812_low_1
[»] chr3 (27 HSPs)
chr3 (18-609)||(27456672-27457262)
chr3 (69-248)||(27461102-27461281)
chr3 (67-252)||(27918386-27918571)
chr3 (67-248)||(11418745-11418926)
chr3 (78-250)||(28081768-28081940)
chr3 (148-251)||(28147829-28147932)
chr3 (148-249)||(28510730-28510831)
chr3 (148-241)||(28035523-28035616)
chr3 (148-248)||(17746229-17746329)
chr3 (148-248)||(19047549-19047649)
chr3 (148-250)||(28002273-28002375)
chr3 (84-180)||(27975380-27975479)
chr3 (148-248)||(28132045-28132145)
chr3 (87-250)||(28183798-28183964)
chr3 (73-116)||(26180782-26180825)
chr3 (73-116)||(26210273-26210316)
chr3 (73-116)||(26237517-26237560)
chr3 (148-250)||(28481557-28481659)
chr3 (508-574)||(32054883-32054949)
chr3 (67-124)||(18026653-18026710)
chr3 (67-124)||(27376218-27376275)
chr3 (211-251)||(18026523-18026563)
chr3 (211-251)||(26115039-26115079)
chr3 (148-248)||(28481751-28481851)
chr3 (87-123)||(28481855-28481891)
chr3 (148-248)||(28481919-28482019)
chr3 (87-123)||(28482023-28482059)
[»] chr8 (5 HSPs)
chr8 (508-605)||(36036281-36036378)
chr8 (508-582)||(12865483-12865557)
chr8 (422-460)||(33023947-33023985)
chr8 (422-459)||(5912218-5912255)
chr8 (508-581)||(13111734-13111807)
[»] chr4 (4 HSPs)
chr4 (508-587)||(24914724-24914803)
chr4 (554-605)||(29540235-29540286)
chr4 (508-586)||(21014965-21015043)
chr4 (541-585)||(9277282-9277326)
[»] scaffold0257 (2 HSPs)
scaffold0257 (148-252)||(17424-17528)
scaffold0257 (87-123)||(17384-17420)
[»] chr5 (6 HSPs)
chr5 (412-460)||(33093412-33093460)
chr5 (508-587)||(33019407-33019486)
chr5 (508-582)||(42147440-42147514)
chr5 (537-585)||(3495033-3495081)
chr5 (508-560)||(7959455-7959507)
chr5 (396-460)||(7964495-7964558)
[»] chr1 (8 HSPs)
chr1 (509-605)||(15741718-15741813)
chr1 (508-605)||(29114574-29114672)
chr1 (422-460)||(42066916-42066954)
chr1 (512-597)||(13183941-13184026)
chr1 (508-585)||(39305248-39305325)
chr1 (508-585)||(5425343-5425420)
chr1 (508-581)||(19020204-19020277)
chr1 (419-460)||(48610193-48610234)
[»] scaffold0043 (1 HSPs)
scaffold0043 (67-124)||(54910-54967)
[»] chr7 (3 HSPs)
chr7 (69-124)||(8693522-8693577)
chr7 (385-459)||(21925125-21925197)
chr7 (508-597)||(34607521-34607610)
[»] chr2 (3 HSPs)
chr2 (508-546)||(78372-78410)
chr2 (511-605)||(7718952-7719046)
chr2 (508-585)||(38205262-38205340)
[»] chr6 (1 HSPs)
chr6 (426-459)||(4593385-4593418)


Alignment Details
Target: chr3 (Bit Score: 540; Significance: 0; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 540; E-Value: 0
Query Start/End: Original strand, 18 - 609
Target Start/End: Complemental strand, 27457262 - 27456672
Alignment:
Q  18 atgattttctccatttctatatcaacttgcttaccacatctgcttactctaagaatagacgaatgtaaagagttgaagcatatcattgaatatgatttga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27457262 atgattttctccatttctatatcaacttgcttaccacatctgcttactctaagaatagacgaatgtaaagagttgaagcatatcattgaatatgatttga 27457163  T
Q  118 agaataataaaatgtaaaattctttttcttcaaagacatgcttcccaaagctaaaaacacttgctgttgtgaactccaacaaattaaaatgtctctttcc 217  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27457162 agaataataaaatgtaaaattctttttcttcaaagacatgcttcacaaagctaaaaacacttgctgttgtgaactccaacaaattaaaatgtctctttcc 27457063  T
Q  218 agtctccataactaaagagcttcctgagctaaagtaaaatattgggcaacccaatgcactaaaactcgtgcatacatagtgtccggaaagtggtcctacc 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27457062 agtctccataactaaagagcttcctgagctaaagtaaaatattgggcaacccaatgcactaaaactcgtgcatacatagtgtccgggaagtggtcctacc 27456963  T
Q  318 atttgatgtattgttcgcagggacgtatctaagattttggtggcctagggggctcaaatttggaccttaactaataagtatacaaaaaattcagatttct 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27456962 atttgatgtattgttcgcagggacgtatctaagattttggtggcctagggggctcaaatttggaccttaactaataagtatacaaaaaattcagatttct 27456863  T
Q  418 gaaatgtgaaaataattttcttgaagatggtagtttttattacttgatgtaataatctagcaaaaacattggacttnnnnnnnnntcaaatttttattta 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||         |||||||||||||||    
T  27456862 gaaatgtgaaaataattttcttgaagatggtagtttttattacttgatgtaataatctagcaaaaataccggactt-aaaaaaaatcaaatttttattta 27456764  T
Q  518 atatccaaatgttcatagaaaacaatttctaccaacatttctatatgcaaagtcactaataattgtgtcatcatcaatatattttatcctat 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27456763 atatccaaatgttcatagaaaacaatttctaccaacatttctatatgcaaagtcactaataattgtgtcatcatcaatatattttatcctat 27456672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 69 - 248
Target Start/End: Complemental strand, 27461281 - 27461102
Alignment:
Q  69 agaatagacgaatgtaaagagttgaagcatatcattgaatatgatttgaagaataataaaatgtaaaattctttttcttcaaagacatgcttcccaaagc 168  Q
    ||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| || ||    | ||||| | ||||| |||||||||||||||||||||    
T  27461281 agaattgaagaatgcaaagagttgaagcatataattgaatatgatttggagaacaaaaactcctcaaattttatttctacaaagacatgcttcccaaagc 27461182  T
Q  169 taaaaacacttgctgttgtgaactccaacaaattaaaatgtctctttccagtctccataactaaagagcttcctgagcta 248  Q
    | |||||||||  ||| || || | |||  | || |||| | |||||||| | ||||||  |||||||||||||||||||    
T  27461181 ttaaaacacttattgtagtaaagtgcaatcagttgaaatatgtctttccaatgtccatatgtaaagagcttcctgagcta 27461102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 67 - 252
Target Start/End: Original strand, 27918386 - 27918571
Alignment:
Q  67 taagaatagacgaatgtaaagagttgaagcatatcattgaatatgatttgaagaataataaaatgtaaaattctttttcttcaaagacatgcttcccaaa 166  Q
    ||||||| || ||||| |||||||||||| |||| |||||| |||||||| ||||||| |||   | || || | | ||| |||||| ||||||||||||    
T  27918386 taagaattgaagaatgcaaagagttgaagtatattattgaagatgatttggagaataaaaaatcctcaatttttatgtctacaaagatatgcttcccaaa 27918485  T
Q  167 gctaaaaacacttgctgttgtgaactccaacaaattaaaatgtctctttccagtctccataactaaagagcttcctgagctaaagt 252  Q
    ||||  | | |||||||| || || | |||||| || |||| | |||||||| ||||||||  |||||| ||||||||||||||||    
T  27918486 gctacgatctcttgctgtagtaaagtgcaacaagttgaaatatgtctttccaatctccatatgtaaagaccttcctgagctaaagt 27918571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 67 - 248
Target Start/End: Original strand, 11418745 - 11418926
Alignment:
Q  67 taagaatagacgaatgtaaagagttgaagcatatcattgaatatgatttgaagaataataaaatgtaaaattctttttcttcaaagacatgcttcccaaa 166  Q
    ||||||| || ||||| ||||||||||||||||| |||||| |||| ||| ||||||| ||    | ||||| | |  || |||||||||||||||||||    
T  11418745 taagaattgaagaatgcaaagagttgaagcatatgattgaagatgacttggagaataaaaattcctcaaattttatggctacaaagacatgcttcccaaa 11418844  T
Q  167 gctaaaaacacttgctgttgtgaactccaacaaattaaaatgtctctttccagtctccataactaaagagcttcctgagcta 248  Q
    |||||||||||||| ||| |  || | |||||| || |||| | | |||||| ||||| |   |||||||||||||||||||    
T  11418845 gctaaaaacacttgttgtagcaaagtgcaacaagttgaaatatgtttttccaatctccctgtgtaaagagcttcctgagcta 11418926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 250
Target Start/End: Original strand, 28081768 - 28081940
Alignment:
Q  78 gaatgtaaagagttgaagcatatcattgaatatgatttgaagaataataaaatgtaaaattctttttcttcaaagacatgcttcccaaagctaaaaacac 177  Q
    ||||| |||||||| |||||||| |||||| |||||||| ||||||| |||   | ||||| | | ||| ||||||||||||| | |||||| |||||||    
T  28081768 gaatgcaaagagttaaagcatattattgaagatgatttggagaataaaaaatcctcaaattttatgtctacaaagacatgctttcaaaagctgaaaacac 28081867  T
Q  178 ttgctgttgtgaactccaacaaattaaaatgtctctttccagtctccataactaaagagcttcctgagctaaa 250  Q
    ||| ||| |  || |  ||||| || |||| | |||||||| ||||| ||  |||||||||||||||||||||    
T  28081868 ttgttgtagcaaagtgtaacaagttgaaatatgtctttccaatctccgtatataaagagcttcctgagctaaa 28081940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 28147829 - 28147932
Alignment:
Q  148 caaagacatgcttcccaaagctaaaaacacttgctgttgtgaactccaacaaattaaaatgtctctttccagtctccataactaaagagcttcctgagct 247  Q
    |||||||||||||||||||||||| || ||||| ||| |  || | |||||| || |||| | | |||||| |||||||| |||||||||||||||||||    
T  28147829 caaagacatgcttcccaaagctaagaatacttgttgtggaaaagtgcaacaagttgaaatatgtgtttccaatctccatatctaaagagcttcctgagct 28147928  T
Q  248 aaag 251  Q
    ||||    
T  28147929 aaag 28147932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 249
Target Start/End: Complemental strand, 28510831 - 28510730
Alignment:
Q  148 caaagacatgcttcccaaagctaaaaacacttgctgttgtgaactccaacaaattaaaatgtctctttccagtctccataactaaagagcttcctgagct 247  Q
    ||||||||||||||||||| |||| || ||||| ||| || || | |||||| || |||| | |||||||| |||||||| ||||||||||||| |||||    
T  28510831 caaagacatgcttcccaaaactaagaatacttgttgtagtaaagtgcaacaagttgaaatatgtctttccaatctccatatctaaagagcttccagagct 28510732  T
Q  248 aa 249  Q
    ||    
T  28510731 aa 28510730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 148 - 241
Target Start/End: Original strand, 28035523 - 28035616
Alignment:
Q  148 caaagacatgcttcccaaagctaaaaacacttgctgttgtgaactccaacaaattaaaatgtctctttccagtctccataactaaagagcttcc 241  Q
    ||||||||||||||||||||||| ||||||||||||| ||  | | |||  | ||||||| | |||||||| ||||||||  ||||||||||||    
T  28035523 caaagacatgcttcccaaagctacaaacacttgctgtagtacaatgcaatcagttaaaatatgtctttccaatctccatatgtaaagagcttcc 28035616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 248
Target Start/End: Complemental strand, 17746329 - 17746229
Alignment:
Q  148 caaagacatgcttcccaaagctaaaaacacttgctgttgtgaactccaacaaattaaaatgtctctttccagtctccataactaaagagcttcctgagct 247  Q
    |||||||||||||||||||||||| ||||||||||||    || | |||||| ||   || | |||||||| ||||||||  ||||||||||||||||||    
T  17746329 caaagacatgcttcccaaagctaagaacacttgctgtgcaaaagtgcaacaagttgttatatgtctttccaatctccatatgtaaagagcttcctgagct 17746230  T
Q  248 a 248  Q
    |    
T  17746229 a 17746229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 248
Target Start/End: Complemental strand, 19047649 - 19047549
Alignment:
Q  148 caaagacatgcttcccaaagctaaaaacacttgctgttgtgaactccaacaaattaaaatgtctctttccagtctccataactaaagagcttcctgagct 247  Q
    |||||||||||||||||||||||| ||||||||||||    || | |||||| ||   || | |||||||| ||||||||  ||||||||||||||||||    
T  19047649 caaagacatgcttcccaaagctaagaacacttgctgtgcaaaagtgcaacaagttgttatatgtctttccaatctccatatgtaaagagcttcctgagct 19047550  T
Q  248 a 248  Q
    |    
T  19047549 a 19047549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 250
Target Start/End: Original strand, 28002273 - 28002375
Alignment:
Q  148 caaagacatgcttcccaaagctaaaaacacttgctgttgtgaactccaacaaattaaaatgtctctttccagtctccataactaaagagcttcctgagct 247  Q
    |||||||||||||||||||||||| || ||||  ||| |  || | |||||| || |||| | | |||||| ||||||||  ||||||||||||||||||    
T  28002273 caaagacatgcttcccaaagctaagaatactttttgtagaaaagtgcaacaagttgaaatatgtgtttccaatctccatatgtaaagagcttcctgagct 28002372  T
Q  248 aaa 250  Q
    |||    
T  28002373 aaa 28002375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 27975380 - 27975479
Alignment:
Q  84 aaagagttgaagcatatcattgaatatgatttgaagaataataaaatgtaaaattctttttct---tcaaagacatgcttcccaaagctaaaaacacttg 180  Q
    ||||||||||||||||| ||||||||||||||| ||||||  |||   | ||||| | | |||    |||||||||||||||||||| ||||||||||||    
T  27975380 aaagagttgaagcatataattgaatatgatttggagaatagaaaatcctcaaattttatgtctacaacaaagacatgcttcccaaagttaaaaacacttg 27975479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 248
Target Start/End: Original strand, 28132045 - 28132145
Alignment:
Q  148 caaagacatgcttcccaaagctaaaaacacttgctgttgtgaactccaacaaattaaaatgtctctttccagtctccataactaaagagcttcctgagct 247  Q
    |||||||||||||||||||| ||||||   ||| ||| || || | |||||| || |||| | |||||||| ||||| ||  ||||||||||||||||||    
T  28132045 caaagacatgcttcccaaagttaaaaatggttgttgtagtaaagtgcaacaagttgaaatatgtctttccaatctccgtatgtaaagagcttcctgagct 28132144  T
Q  248 a 248  Q
    |    
T  28132145 a 28132145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 87 - 250
Target Start/End: Original strand, 28183798 - 28183964
Alignment:
Q  87 gagttgaagcatatcattgaatatgatttgaagaataataaaatgtaaaattctttttcttcaa---agacatgcttcccaaagctaaaaacacttgctg 183  Q
    ||||||||||||||||||||| |||||||| ||||||| ||    | ||||| | | ||| |||   |||||| ||||||||||||| ||| | ||| ||    
T  28183798 gagttgaagcatatcattgaagatgatttggagaataaaaattcctcaaattttatgtctacaacaaagacattcttcccaaagctagaaaaagttgttg 28183897  T
Q  184 ttgtgaactccaacaaattaaaatgtctctttccagtctccataactaaagagcttcctgagctaaa 250  Q
    | |  || | |||||| || |||| | | |||||| ||||||||  |||||||||||||||||||||    
T  28183898 tagaaaagtgcaacaagttgaaatatgtgtttccaatctccatatgtaaagagcttcctgagctaaa 28183964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 116
Target Start/End: Complemental strand, 26180825 - 26180782
Alignment:
Q  73 tagacgaatgtaaagagttgaagcatatcattgaatatgatttg 116  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||    
T  26180825 tagaagaatgcaaagagttgaagcatatcattgaagatgatttg 26180782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 116
Target Start/End: Complemental strand, 26210316 - 26210273
Alignment:
Q  73 tagacgaatgtaaagagttgaagcatatcattgaatatgatttg 116  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||    
T  26210316 tagaagaatgcaaagagttgaagcatatcattgaagatgatttg 26210273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 116
Target Start/End: Complemental strand, 26237560 - 26237517
Alignment:
Q  73 tagacgaatgtaaagagttgaagcatatcattgaatatgatttg 116  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||    
T  26237560 tagaagaatgcaaagagttgaagcatatcattgaagatgatttg 26237517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 250
Target Start/End: Complemental strand, 28481659 - 28481557
Alignment:
Q  148 caaagacatgcttcccaaagctaaaaacacttgctgttgtgaactccaacaaattaaaatgtctctttccagtctccataactaaagagcttcctgagct 247  Q
    |||||||||||||||||||||||| |  ||||| ||| |  || | |||||| || |||| | | |||||| |||||||| |||||||||||||  ||||    
T  28481659 caaagacatgcttcccaaagctaacactacttgttgtggaaaagtgcaacaagttgaaatatgtgtttccaatctccatatctaaagagcttccaaagct 28481560  T
Q  248 aaa 250  Q
    |||    
T  28481559 aaa 28481557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 508 - 574
Target Start/End: Complemental strand, 32054949 - 32054883
Alignment:
Q  508 tttttatttaatatccaaatgttcatagaaaacaatttctaccaacatttctatatgcaaagtcact 574  Q
    ||||||||||||||||||||||||||| |||| || ||| || | | ||| || |||||||||||||    
T  32054949 tttttatttaatatccaaatgttcatacaaaataacttccacgagcgtttttagatgcaaagtcact 32054883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 18026710 - 18026653
Alignment:
Q  67 taagaatagacgaatgtaaagagttgaagcatatcattgaatatgatttgaagaataa 124  Q
    ||||||| || || || ||||||||||||||||| |||||| |||||||| |||||||    
T  18026710 taagaattgaagattgcaaagagttgaagcatattattgaagatgatttggagaataa 18026653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 27376218 - 27376275
Alignment:
Q  67 taagaatagacgaatgtaaagagttgaagcatatcattgaatatgatttgaagaataa 124  Q
    ||||||| || ||||| || |||||||||||||| |||||| |||||||| |||||||    
T  27376218 taagaattgatgaatgcaaggagttgaagcatatgattgaagatgatttggagaataa 27376275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 18026563 - 18026523
Alignment:
Q  211 tctttccagtctccataactaaagagcttcctgagctaaag 251  Q
    |||||||| ||||||||  ||||||||||||||||||||||    
T  18026563 tctttccaatctccatatataaagagcttcctgagctaaag 18026523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 26115079 - 26115039
Alignment:
Q  211 tctttccagtctccataactaaagagcttcctgagctaaag 251  Q
    ||||||||||||||||   ||||||||||||||||||||||    
T  26115079 tctttccagtctccatttgtaaagagcttcctgagctaaag 26115039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 248
Target Start/End: Complemental strand, 28481851 - 28481751
Alignment:
Q  148 caaagacatgcttcccaaagctaaaaacacttgctgttgtgaactccaacaaattaaaatgtctctttccagtctccataactaaagagcttcctgagct 247  Q
    |||||||||||||||||||||||| || ||||| ||| || || | |||||| || |||| | ||||| || | ||||||  |||||| ||||||| |||    
T  28481851 caaagacatgcttcccaaagctaagaatacttggtgtagtaaagtgcaacaagttgaaatatgtcttttcaatttccatatgtaaagaccttcctgcgct 28481752  T
Q  248 a 248  Q
    |    
T  28481751 a 28481751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 28481891 - 28481855
Alignment:
Q  87 gagttgaagcatatcattgaatatgatttgaagaata 123  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  28481891 gagttgaagcatatcattgaagatgatttggagaata 28481855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 248
Target Start/End: Complemental strand, 28482019 - 28481919
Alignment:
Q  148 caaagacatgcttcccaaagctaaaaacacttgctgttgtgaactccaacaaattaaaatgtctctttccagtctccataactaaagagcttcctgagct 247  Q
    |||||| |||||||||||||||| ||| |||||  || || || | |||||| || |||| | | |||||| ||||||||  |||||| |||||||||||    
T  28482019 caaagatatgcttcccaaagctacaaatacttgtagtagtaaagtgcaacaagttgaaatatgtgtttccaatctccatatgtaaagaccttcctgagct 28481920  T
Q  248 a 248  Q
    |    
T  28481919 a 28481919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 28482059 - 28482023
Alignment:
Q  87 gagttgaagcatatcattgaatatgatttgaagaata 123  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  28482059 gagttgaagcatatcattgaagatgatttggagaata 28482023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 1e-21; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 508 - 605
Target Start/End: Original strand, 36036281 - 36036378
Alignment:
Q  508 tttttatttaatatccaaatgttcatagaaaacaatttctaccaacatttctatatgcaaagtcactaataattgtgtcatcatcaatatattttatc 605  Q
    ||||||||| |||| ||||| |||||| ||||||||| |||| | |||||||| |||||||||| ||||||||||||||| |||||||||||| ||||    
T  36036281 tttttatttcatatacaaatattcatacaaaacaattcctacgagcatttctacatgcaaagtctctaataattgtgtcaacatcaatatattctatc 36036378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 508 - 582
Target Start/End: Original strand, 12865483 - 12865557
Alignment:
Q  508 tttttatttaatatccaaatgttcatagaaaacaatttctaccaacatttctatatgcaaagtcactaataattg 582  Q
    ||||||||| |||||||||| |||||| |||||||||||||| |||||||||| ||||||||||| |||||||||    
T  12865483 tttttattttatatccaaatattcatacaaaacaatttctacaaacatttctagatgcaaagtcattaataattg 12865557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 460
Target Start/End: Original strand, 33023947 - 33023985
Alignment:
Q  422 tgtgaaaataattttcttgaagatggtagtttttattac 460  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  33023947 tgtgaaaataattttcttgaagatgatagtttttattac 33023985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 459
Target Start/End: Original strand, 5912218 - 5912255
Alignment:
Q  422 tgtgaaaataattttcttgaagatggtagtttttatta 459  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  5912218 tgtgaaaataattttcttgaagattatagtttttatta 5912255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 581
Target Start/End: Complemental strand, 13111807 - 13111734
Alignment:
Q  508 tttttatttaatatccaaatgttcatagaaaacaatttctaccaacatttctatatgcaaagtcactaataatt 581  Q
    |||||||||||||| | |||| | ||||| |||| ||||||  | |||||||| ||||||||||| ||||||||    
T  13111807 tttttatttaatattcgaatgcttatagataacattttctagaagcatttctagatgcaaagtcattaataatt 13111734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 2e-20; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 508 - 587
Target Start/End: Complemental strand, 24914803 - 24914724
Alignment:
Q  508 tttttatttaatatccaaatgttcatagaaaacaatttctaccaacatttctatatgcaaagtcactaataattgtgtca 587  Q
    ||||| |||||||| |||||||||||| ||||||||| |||| | |||||||||||||||||||||||| ||||||||||    
T  24914803 tttttctttaatattcaaatgttcatacaaaacaattcctacgagcatttctatatgcaaagtcactaacaattgtgtca 24914724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 554 - 605
Target Start/End: Original strand, 29540235 - 29540286
Alignment:
Q  554 atttctatatgcaaagtcactaataattgtgtcatcatcaatatattttatc 605  Q
    ||||||| ||||||||||| |||||||||||||  |||||||||||| ||||    
T  29540235 atttctagatgcaaagtcattaataattgtgtctacatcaatatattctatc 29540286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 508 - 586
Target Start/End: Complemental strand, 21015043 - 21014965
Alignment:
Q  508 tttttatttaatatccaaatgttcatagaaaacaatttctaccaacatttctatatgcaaagtcactaataattgtgtc 586  Q
    ||||||||||||||  ||||| ||||| ||||||||||||||  ||||||||  |  |||||||||||| ||| |||||    
T  21015043 tttttatttaatatttaaatgctcatataaaacaatttctacggacatttctggacacaaagtcactaagaatcgtgtc 21014965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 585
Target Start/End: Complemental strand, 9277326 - 9277282
Alignment:
Q  541 aatttctaccaacatttctatatgcaaagtcactaataattgtgt 585  Q
    ||||||||| | ||||| |||||||||| ||||||||||||||||    
T  9277326 aatttctacgagcatttttatatgcaaattcactaataattgtgt 9277282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 148 - 252
Target Start/End: Original strand, 17424 - 17528
Alignment:
Q  148 caaagacatgcttcccaaagctaaaaacacttgctgttgtgaactccaacaaattaaaatgtctctttccagtctccataactaaagagcttcctgagct 247  Q
    |||||| |||||||||||||||| || | |||||||| || || | |||||| || |||| | | |||||| ||||||||  ||||||||||||||||||    
T  17424 caaagatatgcttcccaaagctacaatctcttgctgtagtaaagtgcaacaagttgaaatatgtgtttccaatctccatatgtaaagagcttcctgagct 17523  T
Q  248 aaagt 252  Q
    |||||    
T  17524 aaagt 17528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 17384 - 17420
Alignment:
Q  87 gagttgaagcatatcattgaatatgatttgaagaata 123  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  17384 gagttgaagcatatcattgaagatgatttggagaata 17420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 460
Target Start/End: Complemental strand, 33093460 - 33093412
Alignment:
Q  412 atttctgaaatgtgaaaataattttcttgaagatggtagtttttattac 460  Q
    |||||| || ||||||||||||||||||||||||| |||||||||||||    
T  33093460 atttctaaagtgtgaaaataattttcttgaagatgatagtttttattac 33093412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 508 - 587
Target Start/End: Original strand, 33019407 - 33019486
Alignment:
Q  508 tttttatttaatatccaaatgttcatagaaaacaatttctaccaacatttctatatgcaaagtcactaataattgtgtca 587  Q
    |||||||||||||| |||||| ||||| |||||| ||||| |  || |||||| || |||||||||||||| ||||||||    
T  33019407 tttttatttaatattcaaatgatcatataaaacattttcttcggacgtttctagatacaaagtcactaatagttgtgtca 33019486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 508 - 582
Target Start/End: Complemental strand, 42147514 - 42147440
Alignment:
Q  508 tttttatttaatatccaaatgttcatagaaaacaatttctaccaacatttctatatgcaaagtcactaataattg 582  Q
    ||||||||||||||  ||||||||||| ||||||||   ||| ||||||| || ||||||| ||| |||||||||    
T  42147514 tttttatttaatatttaaatgttcatacaaaacaatcaatacgaacatttatagatgcaaattcattaataattg 42147440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 537 - 585
Target Start/End: Original strand, 3495033 - 3495081
Alignment:
Q  537 aaacaatttctaccaacatttctatatgcaaagtcactaataattgtgt 585  Q
    ||||||||| ||| | ||||| || ||||||||||||||||||||||||    
T  3495033 aaacaatttatacgaccatttttaaatgcaaagtcactaataattgtgt 3495081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 508 - 560
Target Start/End: Complemental strand, 7959507 - 7959455
Alignment:
Q  508 tttttatttaatatccaaatgttcatagaaaacaatttctaccaacatttcta 560  Q
    ||||||||||||||  ||||| ||||| |||||||||||||| | ||||||||    
T  7959507 tttttatttaatatttaaatgctcatacaaaacaatttctacaagcatttcta 7959455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 460
Target Start/End: Complemental strand, 7964558 - 7964495
Alignment:
Q  396 tatacaaaaaattcagatttctgaaatgtgaaaataattttcttgaagatggtagtttttattac 460  Q
    ||||||||||||| | |||||| ||||||||||| ||||| |||||| ||  |||||||||||||    
T  7964558 tatacaaaaaattga-atttctaaaatgtgaaaaaaatttgcttgaaaataatagtttttattac 7964495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 509 - 605
Target Start/End: Complemental strand, 15741813 - 15741718
Alignment:
Q  509 ttttatttaatatccaaatgttcatagaaaacaatttctaccaacatttctatatgcaaagtcactaataattgtgtcatcatcaatatattttatc 605  Q
    ||||||||||||| |||||| ||||| |||||||||  ||||| |||||||| |||| |||||| |||||| | ||||  ||||||||| |||||||    
T  15741813 ttttatttaatattcaaatgctcatacaaaacaattcttaccagcatttctagatgctaagtcattaataa-tatgtctacatcaatatgttttatc 15741718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 508 - 605
Target Start/End: Complemental strand, 29114672 - 29114574
Alignment:
Q  508 tttttatttaatatccaaatgttcatagaaaacaatttctaccaacatttctatatgcaaagtcacta-ataattgtgtcatcatcaatatattttatc 605  Q
    |||||||||||||| ||| || || || ||||||||||||||   ||||| || ||  |||||||||| |||||||||||| |||||||||||| ||||    
T  29114672 tttttatttaatattcaattgatcgtacaaaacaatttctacatgcatttatagataaaaagtcactatataattgtgtcaacatcaatatattctatc 29114574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 460
Target Start/End: Original strand, 42066916 - 42066954
Alignment:
Q  422 tgtgaaaataattttcttgaagatggtagtttttattac 460  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  42066916 tgtgaaaataattttcttgaagatgatagtttttattac 42066954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 512 - 597
Target Start/End: Complemental strand, 13184026 - 13183941
Alignment:
Q  512 tatttaatatccaaatgttcatagaaaacaatttctaccaacatttctatatgcaaagtcactaataattgtgtcatcatcaatat 597  Q
    |||||||||| |||||||||||| |||||| || | |    ||||||||  ||||||||||||||||| ||||||| |||||||||    
T  13184026 tatttaatattcaaatgttcatacaaaacatttccaatgggcatttctaagtgcaaagtcactaataaatgtgtcaacatcaatat 13183941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 508 - 585
Target Start/End: Original strand, 39305248 - 39305325
Alignment:
Q  508 tttttatttaatatccaaatgttcatagaaaacaatttctaccaacatttctatatgcaaagtcactaataattgtgt 585  Q
    |||||||||||||| |||| | ||||  |||| ||||||||| |||||||||| ||| ||||| || |||||||||||    
T  39305248 tttttatttaatattcaaacgatcattcaaaataatttctacgaacatttctaaatggaaagtaacaaataattgtgt 39305325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 585
Target Start/End: Complemental strand, 5425420 - 5425343
Alignment:
Q  508 tttttatttaatatccaaatgttcatagaaaacaatttctaccaacatttctatatgcaaagtcactaataattgtgt 585  Q
    |||||||||||||||||||||| |||| |||| || ||||| || || ||  | |||||||||||  |||||||||||    
T  5425420 tttttatttaatatccaaatgtgcatacaaaataacttctagcagcagtttaagatgcaaagtcaggaataattgtgt 5425343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 581
Target Start/End: Original strand, 19020204 - 19020277
Alignment:
Q  508 tttttatttaatatccaaatgttcatagaaaacaatttctaccaacatttctatatgcaaagtcactaataatt 581  Q
    ||||||||||||||||||||||||| | || | ||||||||| | ||||| || |  |||| ||||||||||||    
T  19020204 tttttatttaatatccaaatgttcaaacaagataatttctacgagcatttttagaaacaaaatcactaataatt 19020277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 460
Target Start/End: Original strand, 48610193 - 48610234
Alignment:
Q  419 aaatgtgaaaataattttcttgaagatggtagtttttattac 460  Q
    ||||||||| |||||||||||||||||| || ||||||||||    
T  48610193 aaatgtgaagataattttcttgaagatgataatttttattac 48610234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 54967 - 54910
Alignment:
Q  67 taagaatagacgaatgtaaagagttgaagcatatcattgaatatgatttgaagaataa 124  Q
    ||||||| || ||||| ||||||||||||||||| |||||| |||||||| |||||||    
T  54967 taagaattgaagaatgcaaagagttgaagcatatgattgaagatgatttggagaataa 54910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 8693577 - 8693522
Alignment:
Q  69 agaatagacgaatgtaaagagttgaagcatatcattgaatatgatttgaagaataa 124  Q
    ||||| || ||||| ||||||||||||||||| |||||| |||||||| |||||||    
T  8693577 agaattgaagaatgcaaagagttgaagcatattattgaagatgatttggagaataa 8693522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 459
Target Start/End: Complemental strand, 21925197 - 21925125
Alignment:
Q  385 taactaataagtatacaaaaaattcagatttctgaaatgtgaaaataattttcttgaagatggtagtttttatta 459  Q
    ||||||||||||||| ||||||||   |||||| || ||||||  |||||||||||||| || ||||||||||||    
T  21925197 taactaataagtatataaaaaatttgcatttctaaagtgtgaa--taattttcttgaaggtgatagtttttatta 21925125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 597
Target Start/End: Complemental strand, 34607610 - 34607521
Alignment:
Q  508 tttttatttaatatccaaatgttcatagaaaacaatttctaccaacatttctatatgcaaagtcactaataattgtgtcatcatcaatat 597  Q
    |||||||||||||| |||||| ||||  || ||| ||  ||| | ||||| || |||||||||||||||||||||  ||| |||||||||    
T  34607610 tttttatttaatattcaaatgatcatgcaatacatttcatacgagcatttttagatgcaaagtcactaataattggttcaacatcaatat 34607521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 31; Significance: 0.00000006; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 508 - 546
Target Start/End: Original strand, 78372 - 78410
Alignment:
Q  508 tttttatttaatatccaaatgttcatagaaaacaatttc 546  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  78372 tttttatttaatatccaaatgttcatataaaataatttc 78410  T

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Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 511 - 605
Target Start/End: Complemental strand, 7719046 - 7718952
Alignment:
Q  511 ttatttaatatccaaatgttcatagaaaacaatttctaccaacatttctatatgcaaagtcactaataattgtgtcatcatcaatatattttatc 605  Q
    |||||||||||  ||||| | ||| ||||| |||| ||| | ||||| || ||||||||||| ||||||||||| |  ||||||||| |||||||    
T  7719046 ttatttaatatttaaatgctaatacaaaaccatttttacgagcatttttagatgcaaagtcattaataattgtgcctacatcaatatgttttatc 7718952  T

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Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 508 - 585
Target Start/End: Complemental strand, 38205340 - 38205262
Alignment:
Q  508 tttttatttaatatccaaatgttcatagaaaacaatttctaccaacatttctatatgc-aaagtcactaataattgtgt 585  Q
    ||||||||||||||||||||| ||||| ||||||||| |||  | |||||| | |||| |||||| |||| ||||||||    
T  38205340 tttttatttaatatccaaatgctcatacaaaacaattcctatgagcatttcaagatgcaaaagtcgctaaaaattgtgt 38205262  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 459
Target Start/End: Complemental strand, 4593418 - 4593385
Alignment:
Q  426 aaaataattttcttgaagatggtagtttttatta 459  Q
    ||||||||||||||||||||| ||||||||||||    
T  4593418 aaaataattttcttgaagatgatagtttttatta 4593385  T

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