View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17813_low_17 (Length: 362)
Name: NF17813_low_17
Description: NF17813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17813_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 7449951 - 7450254
Alignment:
| Q |
1 |
ttacaatacacaacatactaagaatttaatatttggatcgaaccaaaactttaataccaattattgaaatataaagtggaaaataccaaaataggaccaa |
100 |
Q |
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| T |
7449951 |
ttacaatacacaacatactaagaatttaatatttggatcaaaccaaaactttaataccaattgttgaaatataaagtggaaaataccaaaataggaccaa |
7450050 |
T |
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| Q |
101 |
aa-aatcacttttgtcaaatgatactagagaatgacaatatatgaaatttattacaacacatagacttatctcagaaattccaaggccttggtgtagcta |
199 |
Q |
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| T |
7450051 |
aaaaatcacttttgtcaaatgatactagagaatgacaatatatgaaatttattacaacacatagacttctctcagaaattccaaggccttggtgtagcta |
7450150 |
T |
|
| Q |
200 |
tactctacaaaacaaatacttgaactacatctcaaaatacttgaagacgagaaagtaaaagtgggaaatcaaatacaaacttaatgtatttttagcatgg |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7450151 |
tactctacaaaacaaatacttgaactacatctcaaaatacttgaagacgagaaagtaaaagtgggaaatcaaatacaaacttaatgtatttttagcatgg |
7450250 |
T |
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| Q |
300 |
acac |
303 |
Q |
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|||| |
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| T |
7450251 |
acac |
7450254 |
T |
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