View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17813_low_19 (Length: 359)

Name: NF17813_low_19
Description: NF17813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17813_low_19
NF17813_low_19
[»] chr1 (47 HSPs)
chr1 (1-134)||(23045426-23045559)
chr1 (1-134)||(284330-284463)
chr1 (1-132)||(321625-321756)
chr1 (1-131)||(40783804-40783934)
chr1 (3-132)||(24772054-24772183)
chr1 (3-130)||(27211113-27211240)
chr1 (1-139)||(47037999-47038135)
chr1 (1-131)||(23526240-23526370)
chr1 (1-124)||(46771644-46771767)
chr1 (3-111)||(33082765-33082873)
chr1 (1-116)||(52037269-52037382)
chr1 (3-133)||(1749305-1749435)
chr1 (1-135)||(51064900-51065037)
chr1 (78-133)||(41959076-41959131)
chr1 (78-131)||(3943060-3943113)
chr1 (78-131)||(9588670-9588723)
chr1 (3-80)||(1837978-1838053)
chr1 (78-131)||(13984991-13985044)
chr1 (2-131)||(40261419-40261549)
chr1 (9-83)||(3657125-3657199)
chr1 (3-83)||(31003935-31004012)
chr1 (3-72)||(7765072-7765141)
chr1 (90-131)||(44227848-44227889)
chr1 (1-83)||(52478016-52478096)
chr1 (90-136)||(41959809-41959855)
chr1 (90-131)||(3943763-3943804)
chr1 (1-81)||(27143158-27143239)
chr1 (6-71)||(40562733-40562797)
chr1 (78-131)||(44228228-44228281)
chr1 (65-117)||(40564241-40564293)
chr1 (1-72)||(18396754-18396825)
chr1 (1-63)||(31061601-31061662)
chr1 (90-131)||(9589631-9589672)
chr1 (1-132)||(34458870-34459000)
chr1 (48-83)||(14351954-14351989)
chr1 (78-123)||(1168369-1168414)
chr1 (103-132)||(16120674-16120703)
chr1 (103-139)||(40772006-40772043)
chr1 (103-131)||(6402644-6402672)
chr1 (99-131)||(10845481-10845513)
chr1 (103-131)||(11641067-11641095)
chr1 (100-132)||(13984436-13984468)
chr1 (103-131)||(30701718-30701746)
chr1 (103-131)||(36399332-36399360)
chr1 (103-131)||(36757486-36757514)
chr1 (103-131)||(40771772-40771800)
chr1 (103-131)||(52024260-52024288)
[»] chr7 (36 HSPs)
chr7 (1-131)||(10981508-10981638)
chr7 (1-131)||(27813811-27813941)
chr7 (1-131)||(40348960-40349090)
chr7 (1-129)||(36453271-36453399)
chr7 (3-133)||(47110449-47110577)
chr7 (1-133)||(25614500-25614630)
chr7 (1-83)||(3091565-3091647)
chr7 (78-131)||(25060133-25060186)
chr7 (1-83)||(7743544-7743625)
chr7 (78-131)||(2911548-2911601)
chr7 (2-73)||(16360442-16360511)
chr7 (3-81)||(16662146-16662222)
chr7 (3-81)||(17636506-17636582)
chr7 (1-71)||(27942186-27942256)
chr7 (1-108)||(37983179-37983282)
chr7 (1-73)||(3498901-3498973)
chr7 (11-125)||(8379948-8380063)
chr7 (90-125)||(25059456-25059491)
chr7 (103-138)||(41898222-41898257)
chr7 (103-134)||(47156024-47156055)
chr7 (103-137)||(28061509-28061543)
chr7 (103-137)||(46103364-46103398)
chr7 (90-131)||(2910859-2910900)
chr7 (3-40)||(28200298-28200335)
chr7 (103-132)||(36623307-36623336)
chr7 (107-140)||(48602427-48602460)
chr7 (103-131)||(16778505-16778533)
chr7 (103-131)||(20885103-20885131)
chr7 (103-131)||(25566548-25566576)
chr7 (103-131)||(28061749-28061777)
chr7 (103-131)||(36623542-36623570)
chr7 (103-131)||(38852081-38852109)
chr7 (103-131)||(41897988-41898016)
chr7 (103-131)||(42877386-42877414)
chr7 (103-131)||(46103597-46103625)
chr7 (103-131)||(47156261-47156289)
[»] chr6 (34 HSPs)
chr6 (1-131)||(1605579-1605709)
chr6 (1-131)||(29260192-29260322)
chr6 (1-132)||(8626481-8626612)
chr6 (1-124)||(30734630-30734753)
chr6 (1-131)||(13757208-13757338)
chr6 (1-131)||(7761301-7761429)
chr6 (3-131)||(15064843-15064971)
chr6 (1-116)||(31559883-31559998)
chr6 (1-131)||(8235624-8235754)
chr6 (1-133)||(4129433-4129557)
chr6 (1-131)||(17942443-17942575)
chr6 (16-125)||(30734772-30734879)
chr6 (78-131)||(19996715-19996768)
chr6 (9-80)||(21277589-21277659)
chr6 (1-83)||(3798151-3798233)
chr6 (90-131)||(19996322-19996363)
chr6 (4-80)||(11370635-11370711)
chr6 (1-131)||(14286989-14287118)
chr6 (103-139)||(4147923-4147959)
chr6 (103-134)||(25476042-25476073)
chr6 (93-131)||(15064695-15064733)
chr6 (93-131)||(17942682-17942720)
chr6 (46-131)||(1814595-1814680)
chr6 (103-132)||(22055006-22055035)
chr6 (103-136)||(32671811-32671844)
chr6 (40-73)||(33845469-33845502)
chr6 (103-131)||(18668688-18668716)
chr6 (103-131)||(18668922-18668950)
chr6 (103-131)||(19087958-19087986)
chr6 (103-131)||(19088192-19088220)
chr6 (103-131)||(20437017-20437045)
chr6 (103-131)||(24623941-24623969)
chr6 (103-131)||(32414913-32414941)
chr6 (103-131)||(32420754-32420782)
[»] chr4 (45 HSPs)
chr4 (1-131)||(21310425-21310555)
chr4 (1-131)||(25704651-25704781)
chr4 (1-131)||(24706394-24706524)
chr4 (1-131)||(12071561-12071691)
chr4 (1-131)||(14261044-14261174)
chr4 (1-131)||(22321414-22321544)
chr4 (1-131)||(34324729-34324860)
chr4 (1-131)||(40122632-40122762)
chr4 (1-131)||(44568837-44568967)
chr4 (1-136)||(21661682-21661817)
chr4 (1-136)||(21670446-21670581)
chr4 (185-343)||(6543267-6543434)
chr4 (1-124)||(50767871-50767994)
chr4 (3-134)||(20249162-20249292)
chr4 (1-129)||(31892240-31892364)
chr4 (16-131)||(1988036-1988150)
chr4 (2-134)||(26676714-26676846)
chr4 (1-83)||(20714495-20714577)
chr4 (1-131)||(6129095-6129225)
chr4 (1-80)||(32543532-32543610)
chr4 (1-131)||(19692723-19692853)
chr4 (1-131)||(19703308-19703438)
chr4 (8-71)||(34284171-34284234)
chr4 (103-138)||(19433351-19433386)
chr4 (78-116)||(19361662-19361700)
chr4 (1-83)||(48652268-48652349)
chr4 (103-135)||(55209808-55209840)
chr4 (103-134)||(2760961-2760992)
chr4 (103-133)||(2760728-2760758)
chr4 (269-343)||(6524063-6524137)
chr4 (21-63)||(18507430-18507472)
chr4 (90-124)||(19362189-19362223)
chr4 (93-139)||(20249006-20249052)
chr4 (103-133)||(55209572-55209602)
chr4 (103-131)||(4467520-4467548)
chr4 (93-133)||(12071799-12071839)
chr4 (103-131)||(26169986-26170014)
chr4 (103-131)||(26170221-26170249)
chr4 (103-131)||(29830343-29830371)
chr4 (103-131)||(35381128-35381156)
chr4 (103-131)||(38416650-38416678)
chr4 (103-131)||(38416884-38416912)
chr4 (103-131)||(44232077-44232105)
chr4 (103-131)||(45292066-45292094)
chr4 (103-131)||(47386520-47386548)
[»] scaffold1431 (1 HSPs)
scaffold1431 (1-131)||(46-176)
[»] chr8 (43 HSPs)
chr8 (1-131)||(2540078-2540208)
chr8 (1-131)||(3585451-3585581)
chr8 (1-131)||(11174370-11174500)
chr8 (1-131)||(40058450-40058580)
chr8 (1-131)||(11646472-11646602)
chr8 (1-132)||(43275546-43275675)
chr8 (1-132)||(37345570-37345701)
chr8 (1-131)||(7146913-7147043)
chr8 (1-131)||(40918878-40919006)
chr8 (1-139)||(36068072-36068210)
chr8 (1-124)||(30999670-30999791)
chr8 (1-133)||(27034995-27035126)
chr8 (1-133)||(20546436-20546566)
chr8 (1-131)||(28562421-28562552)
chr8 (78-138)||(45278701-45278761)
chr8 (78-131)||(8697898-8697951)
chr8 (1-73)||(13881101-13881174)
chr8 (78-131)||(41307961-41308014)
chr8 (3-129)||(35866616-35866742)
chr8 (78-132)||(40486453-40486507)
chr8 (78-131)||(10646592-10646645)
chr8 (1-83)||(28326804-28326883)
chr8 (1-131)||(28567919-28568049)
chr8 (1-131)||(28575512-28575642)
chr8 (1-83)||(37510314-37510396)
chr8 (90-131)||(41305762-41305803)
chr8 (93-137)||(40918725-40918769)
chr8 (1-72)||(10181004-10181074)
chr8 (93-139)||(7147152-7147198)
chr8 (103-137)||(32998674-32998708)
chr8 (3-73)||(39151464-39151533)
chr8 (103-132)||(132016-132045)
chr8 (3-81)||(30906837-30906917)
chr8 (93-138)||(43275392-43275437)
chr8 (90-131)||(45278013-45278053)
chr8 (103-131)||(616783-616811)
chr8 (103-131)||(617017-617045)
chr8 (103-131)||(623176-623204)
chr8 (103-131)||(623410-623438)
chr8 (99-131)||(5878317-5878349)
chr8 (103-131)||(14237514-14237542)
chr8 (103-131)||(40494618-40494646)
chr8 (103-131)||(42587482-42587510)
[»] chr5 (30 HSPs)
chr5 (1-131)||(12807000-12807130)
chr5 (1-131)||(25773649-25773779)
chr5 (1-134)||(30720639-30720772)
chr5 (1-131)||(10285204-10285334)
chr5 (1-131)||(40886757-40886887)
chr5 (1-138)||(36561246-36561383)
chr5 (1-131)||(37900771-37900901)
chr5 (1-120)||(7277569-7277688)
chr5 (3-93)||(25683377-25683467)
chr5 (11-131)||(16983258-16983380)
chr5 (1-142)||(734485-734625)
chr5 (6-81)||(23098386-23098461)
chr5 (1-83)||(30403108-30403191)
chr5 (1-131)||(39070883-39071013)
chr5 (1-137)||(11319553-11319689)
chr5 (82-131)||(15305216-15305265)
chr5 (1-71)||(1056429-1056498)
chr5 (103-140)||(8086264-8086301)
chr5 (90-131)||(15304822-15304863)
chr5 (23-131)||(11796451-11796559)
chr5 (103-134)||(33387453-33387484)
chr5 (3-72)||(16054173-16054240)
chr5 (93-131)||(25683229-25683267)
chr5 (103-132)||(978311-978340)
chr5 (103-140)||(40156189-40156226)
chr5 (103-131)||(978077-978105)
chr5 (103-131)||(9502627-9502655)
chr5 (103-131)||(14634157-14634185)
chr5 (105-133)||(24992374-24992402)
chr5 (93-137)||(40886604-40886648)
[»] chr3 (48 HSPs)
chr3 (1-131)||(13364843-13364973)
chr3 (1-135)||(46694257-46694391)
chr3 (1-134)||(198852-198985)
chr3 (1-131)||(19241815-19241945)
chr3 (2-131)||(29375138-29375267)
chr3 (1-132)||(36881281-36881410)
chr3 (1-132)||(23088078-23088209)
chr3 (1-131)||(3383076-3383206)
chr3 (1-131)||(43750137-43750267)
chr3 (27-124)||(32835129-32835226)
chr3 (10-131)||(13702769-13702890)
chr3 (53-131)||(27707363-27707441)
chr3 (78-131)||(12094582-12094635)
chr3 (1-79)||(19897074-19897152)
chr3 (78-132)||(19911508-19911562)
chr3 (46-131)||(37293437-37293522)
chr3 (78-131)||(44277455-44277508)
chr3 (1-72)||(37780996-37781067)
chr3 (78-131)||(38805245-38805298)
chr3 (46-114)||(48820444-48820512)
chr3 (90-136)||(44276770-44276816)
chr3 (62-131)||(48963156-48963223)
chr3 (3-80)||(1455297-1455374)
chr3 (90-131)||(19912174-19912215)
chr3 (90-131)||(38806341-38806382)
chr3 (1-108)||(54086577-54086683)
chr3 (103-137)||(19823894-19823928)
chr3 (78-131)||(4235751-4235803)
chr3 (90-131)||(12095423-12095464)
chr3 (1-121)||(18356014-18356134)
chr3 (2-65)||(17755221-17755284)
chr3 (2-65)||(19056541-19056604)
chr3 (3-81)||(44522491-44522567)
chr3 (103-133)||(13499569-13499599)
chr3 (103-133)||(42761717-42761747)
chr3 (46-124)||(53559802-53559880)
chr3 (103-140)||(20765187-20765224)
chr3 (3-72)||(24064283-24064352)
chr3 (2-43)||(27707136-27707177)
chr3 (3-72)||(52805175-52805244)
chr3 (78-122)||(4226716-4226759)
chr3 (103-131)||(6910568-6910596)
chr3 (103-131)||(20765430-20765458)
chr3 (103-131)||(27010474-27010502)
chr3 (103-131)||(27010708-27010736)
chr3 (103-131)||(42490430-42490458)
chr3 (103-131)||(42761483-42761511)
chr3 (105-137)||(44562020-44562052)
[»] chr2 (30 HSPs)
chr2 (1-131)||(3518908-3519038)
chr2 (1-131)||(39938170-39938300)
chr2 (1-130)||(23366790-23366919)
chr2 (1-131)||(1102503-1102633)
chr2 (4-131)||(37673887-37674014)
chr2 (3-131)||(12969888-12970016)
chr2 (1-103)||(1646317-1646417)
chr2 (1-54)||(22388282-22388335)
chr2 (78-131)||(34224378-34224431)
chr2 (16-83)||(35179097-35179164)
chr2 (1-72)||(14779838-14779907)
chr2 (3-83)||(19976380-19976459)
chr2 (4-131)||(39562037-39562162)
chr2 (1-83)||(18078104-18078186)
chr2 (93-134)||(12969737-12969778)
chr2 (1-121)||(1002877-1002997)
chr2 (1-80)||(32840319-32840401)
chr2 (103-138)||(11841586-11841621)
chr2 (103-137)||(5405230-5405264)
chr2 (93-131)||(40756911-40756949)
chr2 (103-132)||(44365391-44365420)
chr2 (103-131)||(2183191-2183219)
chr2 (103-131)||(7608283-7608311)
chr2 (103-139)||(8042014-8042050)
chr2 (103-131)||(8042256-8042284)
chr2 (103-135)||(13125141-13125173)
chr2 (103-131)||(19141066-19141094)
chr2 (103-131)||(19141300-19141328)
chr2 (103-131)||(39358146-39358174)
chr2 (103-135)||(39358401-39358433)
[»] scaffold0054 (2 HSPs)
scaffold0054 (3-131)||(45454-45582)
scaffold0054 (93-134)||(45692-45733)
[»] scaffold1770 (1 HSPs)
scaffold1770 (1-133)||(168-292)
[»] scaffold0062 (1 HSPs)
scaffold0062 (1-116)||(412-525)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-81)||(70874-70954)
[»] scaffold0257 (2 HSPs)
scaffold0257 (78-131)||(23467-23520)
scaffold0257 (90-134)||(23872-23916)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-65)||(65310-65375)
[»] scaffold0022 (1 HSPs)
scaffold0022 (103-133)||(100645-100675)
[»] scaffold0018 (1 HSPs)
scaffold0018 (105-137)||(67764-67796)


Alignment Details
Target: chr1 (Bit Score: 134; Significance: 1e-69; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 23045426 - 23045559
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23045426 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 23045525  T
Q  101 aatggacatgtattttgaaacggagggagtaata 134  Q
    ||||||||||||||||||||||||||||||||||    
T  23045526 aatggacatgtattttgaaacggagggagtaata 23045559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 284463 - 284330
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  284463 tgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 284364  T
Q  101 aatggacatgtattttgaaacggagggagtaata 134  Q
    ||||||||||||||||||||||||||||||||||    
T  284363 aatggacatgtattttgaaacggagggagtaata 284330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 321756 - 321625
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  321756 tgaaataataaatgattaaggatattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 321657  T
Q  101 aatggacatgtattttgaaacggagggagtaa 132  Q
    |||| |||||||||||||||||||||||||||    
T  321656 aatgaacatgtattttgaaacggagggagtaa 321625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 40783804 - 40783934
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40783804 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaa 40783903  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||| ||||||||||||||||||||||||||    
T  40783904 aatgaacatgtattttgaaacggagggagta 40783934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 24772054 - 24772183
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 102  Q
    |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24772054 aaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttcttcaaaa 24772153  T
Q  103 tggacatgtattttgaaacggagggagtaa 132  Q
    ||||||||||||||||||||||||||||||    
T  24772154 tggacatgtattttgaaacggagggagtaa 24772183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 27211113 - 27211240
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 102  Q
    |||||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27211113 aaataataaatggttaagggtattatagaaaacacacatataatttcctcaaaaataacaaaatttatttggtttcttggttattgcaatttctccaaaa 27211212  T
Q  103 tggacatgtattttgaaacggagggagt 130  Q
    ||||||||||||||||||||||||||||    
T  27211213 tggacatgtattttgaaacggagggagt 27211240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 47037999 - 47038135
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||    
T  47037999 tgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttgatttcttagttagtacaatttctccaa 47038096  T
Q  101 aatggacatgtattttgaaacggagggagtaatatttat 139  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  47038097 aatggacatgtattttgaaacggatggagtagtatttat 47038135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 23526370 - 23526240
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  23526370 tgaaataataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttgattactgcaatttctccaa 23526271  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||| ||||||||||||||| ||| ||||||    
T  23526270 aatgaacatgtattttgaaatggaaggagta 23526240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 46771767 - 46771644
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  46771767 tgaaaaaataaatggttaagggtattatagaaaacacacacataatttcatcaaaaataacaaaatttatttaatttcttggttactgcaatttctccaa 46771668  T
Q  101 aatggacatgtattttgaaacgga 124  Q
    ||||||||||||||||||||||||    
T  46771667 aatggacatgtattttgaaacgga 46771644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 33082873 - 33082765
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 102  Q
    |||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33082873 aaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaa 33082774  T
Q  103 tggacatgt 111  Q
    | |||||||    
T  33082773 tagacatgt 33082765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 52037269 - 52037382
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||| ||||| |||||||||||||||||||  || ||| ||||||||||| |||||||||||||||| |||| || ||||||||||| ||    
T  52037269 tgaaataataaatggttaagagtattatagaaaacacaca--taattttatcaaaaataataaaatttatttggttttttggataatgcaatttctctaa 52037366  T
Q  101 aatggacatgtatttt 116  Q
    ||||||||||||||||    
T  52037367 aatggacatgtatttt 52037382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 1749435 - 1749305
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 102  Q
    |||||||||||| |||| | |||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| ||| ||  |||| |   |||    
T  1749435 aaataataaatggttaatgctattatagaaaacacacatataatttcatcaaaaataacaaaatttatttgatttcttgattactgtgattttttttaaa 1749336  T
Q  103 tggacatgtattttgaaacggagggagtaat 133  Q
    |||| ||||||||| |||||||  |||||||    
T  1749335 tggaaatgtattttaaaacggatcgagtaat 1749305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 51064900 - 51065037
Alignment:
Q  1 tgaaataataaatgattaagggtatt---atagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctc 97  Q
    |||||||||||| || ||||||||||   |||||||| ||||| | | ||||||||||||| |||| ||||||||| || ||||||  ||| |||||||     
T  51064900 tgaaataataaacgagtaagggtattattatagaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttctt 51064999  T
Q  98 caaaatggacatgtattttgaaacggagggagtaatat 135  Q
     |||||||||| ||||| ||||||||||||||||||||    
T  51065000 taaaatggacaagtattgtgaaacggagggagtaatat 51065037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 78 - 133
Target Start/End: Complemental strand, 41959131 - 41959076
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 133  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41959131 cttggttattgcaatttctccaaaatggacatgtattttgaaacggagggagtaat 41959076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 3943113 - 3943060
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3943113 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 3943060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 9588723 - 9588670
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9588723 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 9588670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 1837978 - 1838053
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 80  Q
    ||||||||||||  |||||||||||||||||| |||||  || |||||||||||||||||||||||||||| ||||||    
T  1837978 aaataataaatgggtaagggtattatagaaaaaacaca--taatttcatcaaaaataacaaaatttatttgatttctt 1838053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 13984991 - 13985044
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  13984991 cttggttactgcaatttctccaaaatggacatgtattttgaaacggatggagta 13985044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 40261419 - 40261549
Alignment:
Q  2 gaaataataaatgattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtg-caatttctcca 99  Q
    ||||||||||||| |||| | |||||||||||| | |||||  | ||||||||||| |||||||||||||||| |||||||||  |||  ||||||| ||    
T  40261419 gaaataataaatggttaatgatattatagaaaaaaacacacgcaatttcatcaaaattaacaaaatttatttgatttcttggtatgtgtaaatttct-ca 40261517  T
Q  100 aaatggacatgtattttgaaacggagggagta 131  Q
    |||   ||||||||| ||||||||||||||||    
T  40261518 aaagcaacatgtattgtgaaacggagggagta 40261549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 3657199 - 3657125
Alignment:
Q  9 taaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 83  Q
    |||||| |||||| |||||||||||| ||| ||| | |||||| ||||||||||||||||||||| |||||||||    
T  3657199 taaatggttaaggttattatagaaaaaacatacaaaatttcattaaaaataacaaaatttatttgatttcttggt 3657125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 31003935 - 31004012
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 83  Q
    |||||||||||| ||||||||||||||||||| | ||||||| |||||| ||||||   |||||||||||| |||||||||    
T  31003935 aaataataaatggttaagggtattatagaaaaaatacacatactttcattaaaaat---aaaatttatttgatttcttggt 31004012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 7765141 - 7765072
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 72  Q
    |||||||||||| ||| ||||||||  ||||||||||| ||| ||||| |||||||||||||||||||||    
T  7765141 aaataataaatggttatgggtattacggaaaacacacatataatttcaccaaaaataacaaaatttattt 7765072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 44227889 - 44227848
Alignment:
Q  90 aatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44227889 aatttctccaaaatggacatgtattttgaaacggagggagta 44227848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 52478096 - 52478016
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 83  Q
    |||||| ||||||  |||||| |||||||||||| ||||| |   |||||||||||||||||||||||||||| |||||||||    
T  52478096 tgaaatgataaatttttaaggttattatagaaaaaacacaaaa--tttcatcaaaaataacaaaatttatttgatttcttggt 52478016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 41959809 - 41959855
Alignment:
Q  90 aatttctccaaaatggacatgtattttgaaacggagggagtaatatt 136  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  41959809 aatttctctaaaatggacatgtattttgaaacggagggagtattatt 41959855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 3943763 - 3943804
Alignment:
Q  90 aatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  3943763 aatttctctaaaatggacatgtattttgaaacggagggagta 3943804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 27143158 - 27143239
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttg 81  Q
    ||||||||||||||||||||  |||||||||||| | | |||  | |||| ||||||||||||||||||||||| |||||||    
T  27143158 tgaaataataaatgattaagaatattatagaaaaaaactcacggaatttcctcaaaaataacaaaatttatttgatttcttg 27143239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 40562733 - 40562797
Alignment:
Q  6 taataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 71  Q
    ||||||||| |||| |||||||||||||||||| | ||| ||| ||||||||||||||||||||||    
T  40562733 taataaatggttaatggtattatagaaaacacatatataattt-atcaaaaataacaaaatttatt 40562797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 44228228 - 44228281
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    ||||||||  ||||||||||||||||||||||||||||||||| ||||| ||||    
T  44228228 cttggttacagcaatttctccaaaatggacatgtattttgaaatggaggtagta 44228281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 40564241 - 40564293
Alignment:
Q  65 atttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttg 117  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||| |||||||    
T  40564241 atttatttggtttcttggttactgcgatttttccaaaatggacatatattttg 40564293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 18396825 - 18396754
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 72  Q
    ||||||||| |||| ||||   ||||||||||||  |||||||| |||||| ||||||||||||||||||||    
T  18396825 tgaaataatgaatggttaaatatattatagaaaaaccacacataatttcataaaaaataacaaaatttattt 18396754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 31061601 - 31061662
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaa 63  Q
    |||||||||||||| ||| ||||||||| ||||| ||||||||| |||||| |||||||||||    
T  31061601 tgaaataataaatggtta-gggtattatggaaaaaacacacataatttcataaaaaataacaa 31061662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 9589631 - 9589672
Alignment:
Q  90 aatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  9589631 aatttctctaaaatagacatgtattttgaaacggagggagta 9589672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 34458870 - 34459000
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaattt-ctcca 99  Q
    ||||||||||||| | ||||| |||||||||||  | ||||| | |||||| |||||||  |||||||||||| |||||||||  ||| ||||| ||  |    
T  34458870 tgaaataataaattagtaaggttattatagaaa--aaacacagaatttcataaaaaatagaaaaatttatttgatttcttggtatgtgtaatttcctaaa 34458967  T
Q  100 aaatggacatgtattttgaaacggagggagtaa 132  Q
    |||  |||| ||||| ||||||||| |||||||    
T  34458968 aaaacgacaagtattgtgaaacggatggagtaa 34459000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 48 - 83
Target Start/End: Original strand, 14351954 - 14351989
Alignment:
Q  48 tcatcaaaaataacaaaatttatttggtttcttggt 83  Q
    |||||||||||||||||||||||||| |||||||||    
T  14351954 tcatcaaaaataacaaaatttatttgttttcttggt 14351989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 1168414 - 1168369
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacgg 123  Q
    |||||||| |||||||||| |||||  |||||||||||||||||||    
T  1168414 cttggttactgcaatttcttcaaaaacgacatgtattttgaaacgg 1168369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Original strand, 16120674 - 16120703
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaa 132  Q
    ||||||||||||||||||||||||||||||    
T  16120674 tggacatgtattttgaaacggagggagtaa 16120703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 139
Target Start/End: Original strand, 40772006 - 40772043
Alignment:
Q  103 tggacatgtattttgaaacggagggagta-atatttat 139  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  40772006 tggacatgtattttgaaacggagggagtatatatttat 40772043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 6402644 - 6402672
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  6402644 tggacatgtattttgaaacggagggagta 6402672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 10845513 - 10845481
Alignment:
Q  99 aaaatggacatgtattttgaaacggagggagta 131  Q
    ||||||||||||||||||||||||||| |||||    
T  10845513 aaaatggacatgtattttgaaacggagtgagta 10845481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 11641095 - 11641067
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  11641095 tggacatgtattttgaaacggagggagta 11641067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 13984468 - 13984436
Alignment:
Q  100 aaatggacatgtattttgaaacggagggagtaa 132  Q
    ||||||| |||||||||||||||||||||||||    
T  13984468 aaatggatatgtattttgaaacggagggagtaa 13984436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 30701746 - 30701718
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  30701746 tggacatgtattttgaaacggagggagta 30701718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 36399332 - 36399360
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  36399332 tggacatgtattttgaaacggagggagta 36399360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 36757514 - 36757486
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  36757514 tggacatgtattttgaaacggagggagta 36757486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 40771800 - 40771772
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  40771800 tggacatgtattttgaaacggagggagta 40771772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 52024260 - 52024288
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  52024260 tggacatgtattttgaaacggagggagta 52024288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 7e-68; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 10981638 - 10981508
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10981638 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 10981539  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||||    
T  10981538 aatggacatgtattttgaaacggagggagta 10981508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 27813941 - 27813811
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27813941 tgaaataataaatgattaagggtattatagaaaacacatacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 27813842  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||||    
T  27813841 aatggacatgtattttgaaacggagggagta 27813811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 40349090 - 40348960
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40349090 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaa 40348991  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||| ||||||    
T  40348990 aatggacatgtattttgaaacggaaggagta 40348960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 36453271 - 36453399
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36453271 tgaaataataaatgattaagggtattatagaaaaaacacacatattttcatcaaaaataataaaatttatttggtttcttggttagtgcaatttctccaa 36453370  T
Q  101 aatggacatgtattttgaaacggagggag 129  Q
    |||||||||||||||||||||||||||||    
T  36453371 aatggacatgtattttgaaacggagggag 36453399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 47110577 - 47110449
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 102  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47110577 aaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttattttgtttcttggttagtgcaatttctccaaaa 47110480  T
Q  103 tggacatgtattttgaaacggagggagtaat 133  Q
    |||||||||||||||||| ||||||||||||    
T  47110479 tggacatgtattttgaaatggagggagtaat 47110449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 25614500 - 25614630
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25614500 tgaaataataaatgattaagggtatttcagaaaacac--acatattttcatcaaaaataacaaaatttatttggttttttggttagtgcaatttctccaa 25614597  T
Q  101 aatggacatgtattttgaaacggagggagtaat 133  Q
    |||||||||||||||||||||||| ||||||||    
T  25614598 aatggacatgtattttgaaacggaaggagtaat 25614630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 3091647 - 3091565
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 83  Q
    |||||||||||||| ||||||||||||||||||| ||||| | | |||||||||||||||||||||||||||| ||| |||||    
T  3091647 tgaaataataaatggttaagggtattatagaaaaaacacaaagaatttcatcaaaaataacaaaatttatttgattttttggt 3091565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 25060133 - 25060186
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25060133 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 25060186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7743544 - 7743625
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 83  Q
    ||||||||||||| ||||| |||||||||||||  | ||||||| |||||||||||||||||||||||||||| | |||||||    
T  7743544 tgaaataataaataattaacggtattatagaaagaa-acacataatttcatcaaaaataacaaaatttatttgatatcttggt 7743625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 2911548 - 2911601
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  2911548 cttggttactgcaatttctccaaaatggacatgtattttgaaatggagggagta 2911601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 16360511 - 16360442
Alignment:
Q  2 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttg 73  Q
    ||||||||||||| ||||||||||||||||||  | ||||| | ||||||||||||||||||||||||||||    
T  16360511 gaaataataaatggttaagggtattatagaaa--aaacacagaatttcatcaaaaataacaaaatttatttg 16360442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 16662222 - 16662146
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 81  Q
    |||||||||||| |||||||||||||| |||| ||||| ||  |||||||||||||||||||||||||||  |||||||    
T  16662222 aaataataaatggttaagggtattataaaaaaaacacaaat--tttcatcaaaaataacaaaatttattttatttcttg 16662146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 17636582 - 17636506
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 81  Q
    |||||||||||| |||||||||||||| |||| ||||| ||  |||||||||||||||||||||||||||  |||||||    
T  17636582 aaataataaatggttaagggtattataaaaaaaacacaaat--tttcatcaaaaataacaaaatttattttatttcttg 17636506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 27942186 - 27942256
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 71  Q
    |||||||||||||| |||| |||||||||||||| ||||||||| | |||| |||||||| ||||||||||    
T  27942186 tgaaataataaatggttaaaggtattatagaaaaaacacacataatctcattaaaaataaaaaaatttatt 27942256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 37983282 - 37983179
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||| |||| ||||||||| |||||| | |     |||||||||||||||||||||||||||| ||||||| |  ||| ||||||  |||    
T  37983282 tgaaataataaatggttaaaggtattataaaaaacataaaa----tttcatcaaaaataacaaaatttatttgatttcttgatatgtgtaatttcctcaa 37983187  T
Q  101 aatggaca 108  Q
    ||||||||    
T  37983186 aatggaca 37983179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3498901 - 3498973
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttg 73  Q
    |||||||||||||| ||||  ||||||||||||| | ||| | | |||||| ||||||||||||||| |||||    
T  3498901 tgaaataataaatggttaaaagtattatagaaaagatacaaaaaatttcataaaaaataacaaaattaatttg 3498973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 8380063 - 8379948
Alignment:
Q  11 aatgattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacat 109  Q
    |||||||| ||||||||||||||| | |||| | |  ||||| || |||||||||||||||||| |||||| ||   || ||||||  |||||| ||||     
T  8380063 aatgattaggggtattatagaaaaaagcacaaaaaagttcattaacaataacaaaatttatttgatttcttagtatatgtaatttcctcaaaatcgacaa 8379964  T
Q  110 gtattttgaaacggag 125  Q
    ||||| ||||||||||    
T  8379963 gtattgtgaaacggag 8379948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 125
Target Start/End: Complemental strand, 25059491 - 25059456
Alignment:
Q  90 aatttctccaaaatggacatgtattttgaaacggag 125  Q
    |||||||| |||||||||||||||||||||||||||    
T  25059491 aatttctctaaaatggacatgtattttgaaacggag 25059456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 138
Target Start/End: Original strand, 41898222 - 41898257
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaatattta 138  Q
    ||||||||||||||||||||||||||||| ||||||    
T  41898222 tggacatgtattttgaaacggagggagtattattta 41898257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 134
Target Start/End: Complemental strand, 47156055 - 47156024
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaata 134  Q
    ||||||||||||||||||||||||||||||||    
T  47156055 tggacatgtattttgaaacggagggagtaata 47156024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 28061543 - 28061509
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaatattt 137  Q
    ||||||||||||||||||||||||||||| |||||    
T  28061543 tggacatgtattttgaaacggagggagtattattt 28061509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 46103398 - 46103364
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaatattt 137  Q
    ||||||||||||||||||||||||||||| |||||    
T  46103398 tggacatgtattttgaaacggagggagtactattt 46103364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 2910900 - 2910859
Alignment:
Q  90 aatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||  ||||| |||||||||||||||||||||||||||    
T  2910900 aatttctttaaaatagacatgtattttgaaacggagggagta 2910859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 28200335 - 28200298
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacaca 40  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  28200335 aaataataaatgattaaggatattatagaaaaaacaca 28200298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Complemental strand, 36623336 - 36623307
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaa 132  Q
    ||||||||||||||||||||||||||||||    
T  36623336 tggacatgtattttgaaacggagggagtaa 36623307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 140
Target Start/End: Complemental strand, 48602460 - 48602427
Alignment:
Q  107 catgtattttgaaacggagggagtaatatttata 140  Q
    ||||||||||||||||||||||||| ||||||||    
T  48602460 catgtattttgaaacggagggagtagtatttata 48602427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 16778533 - 16778505
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  16778533 tggacatgtattttgaaacggagggagta 16778505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 20885131 - 20885103
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  20885131 tggacatgtattttgaaacggagggagta 20885103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 25566576 - 25566548
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  25566576 tggacatgtattttgaaacggagggagta 25566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 28061749 - 28061777
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  28061749 tggacatgtattttgaaacggagggagta 28061777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 36623542 - 36623570
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  36623542 tggacatgtattttgaaacggagggagta 36623570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 38852081 - 38852109
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  38852081 tggacatgtattttgaaacggagggagta 38852109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 41898016 - 41897988
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  41898016 tggacatgtattttgaaacggagggagta 41897988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 42877414 - 42877386
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  42877414 tggacatgtattttgaaacggagggagta 42877386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 46103597 - 46103625
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  46103597 tggacatgtattttgaaacggagggagta 46103625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 47156261 - 47156289
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  47156261 tggacatgtattttgaaacggagggagta 47156289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 131; Significance: 7e-68; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 1605709 - 1605579
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1605709 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 1605610  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||||    
T  1605609 aatggacatgtattttgaaacggagggagta 1605579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 29260322 - 29260192
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29260322 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 29260223  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||||    
T  29260222 aatggacatgtattttgaaacggagggagta 29260192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 8626612 - 8626481
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  8626612 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttaatgcaatttcttcaa 8626513  T
Q  101 aatggacatgtattttgaaacggagggagtaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  8626512 aatggacatgtattttgaaacggagggagtaa 8626481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 30734630 - 30734753
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30734630 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 30734729  T
Q  101 aatggacatgtattttgaaacgga 124  Q
    ||||||||||||||||||||||||    
T  30734730 aatggacatgtattttgaaacgga 30734753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 13757338 - 13757208
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13757338 tgaaataataattgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgtaatttctccaa 13757239  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    ||||||||||||||||||||||||| |||||    
T  13757238 aatggacatgtattttgaaacggagagagta 13757208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 7761429 - 7761301
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7761429 tgaaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttagtttcttggttagtgcaatttctccaa 7761332  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||||    
T  7761331 aatggacatgtattttgaaacggagggagta 7761301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 15064843 - 15064971
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 102  Q
    |||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  15064843 aaataataaatggttaagggtagtataaaaaacacacacataatttcatcaaaaataacaaaatttatttggtttcttggttgctgcaatttctctaaaa 15064942  T
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  15064943 tggacatgtattttgaaacggagggagta 15064971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 31559883 - 31559998
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  31559883 tgaaataataaatgattaagggtattacagaaaacatacacatattttcatcaaaaataacaaaatttatttgattttttggttaatgcaatttctccaa 31559982  T
Q  101 aatggacatgtatttt 116  Q
    ||||||||||||||||    
T  31559983 aatggacatgtatttt 31559998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 8235754 - 8235624
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||| ||||||| |||||||||||| |||||||||| |||    
T  8235754 tgaaataataaatgattaagggtattatagaaaacacacacataatatcataaaaaataacaaattttatttcgtttcttggttactgcaatttcttcaa 8235655  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||| ||||||||||| |||  |||||||||    
T  8235654 aatgtacatgtattttaaaatagagggagta 8235624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 4129557 - 4129433
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||| ||||||||||||||    
T  4129557 tgaaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttattt--------ggttactgcaatttctccaa 4129466  T
Q  101 aatggacatgtattttgaaacggagggagtaat 133  Q
    | |||| ||||||||||||||||||||||||||    
T  4129465 agtggatatgtattttgaaacggagggagtaat 4129433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 17942575 - 17942443
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatt--tatttggtttcttggttagtgcaatttctcc 98  Q
    |||||||||||||| |||||||||||||||| ||||| |||||| ||||||||||||||| ||||    |||||||||||||||||| |||||||||||     
T  17942575 tgaaataataaatggttaagggtattatagagaacacgcacataatttcatcaaaaataaaaaaaaaaatatttggtttcttggttactgcaatttctca 17942476  T
Q  99 aaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||| ||||||||    
T  17942475 aaaatggacatgtattttgaaacgaagggagta 17942443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 30734772 - 30734879
Alignment:
Q  16 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 115  Q
    |||||||||||||||||||||||||  || |||||||||||||||||||||||||||| ||| || |||| |||||||||| ||||||||||||||||||    
T  30734772 ttaagggtattatagaaaacacaca--taatttcatcaaaaataacaaaatttatttgatttttttgttactgcaatttcttcaaaatggacatgtattt 30734869  T
Q  116 tgaaacggag 125  Q
    ||||||||||    
T  30734870 tgaaacggag 30734879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 19996715 - 19996768
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  19996715 cttggttactgcaatttctccaaaatagacatgtattttgaaacggagggagta 19996768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 21277589 - 21277659
Alignment:
Q  9 taaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 80  Q
    ||||| |||||||||||||||||||| ||||| | |||||||| ||||||||||||||||||||| ||||||    
T  21277589 taaataattaagggtattatagaaaa-acacataaattttcataaaaaataacaaaatttatttgatttctt 21277659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 3798233 - 3798151
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 83  Q
    ||||||||||||||  ||||||| |||||||||| ||||| |||  ||||| ||||||||||||||||||||| ||| |||||    
T  3798233 tgaaataataaatgtgtaagggtgttatagaaaaaacacaaataacttcatgaaaaataacaaaatttatttgattttttggt 3798151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 19996363 - 19996322
Alignment:
Q  90 aatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  19996363 aatttctctaaaatggacatgtattttgaaacggagggagta 19996322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 11370635 - 11370711
Alignment:
Q  4 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 80  Q
    ||||||||||| ||||| |||||||| |||| |||||   | | |||||||||||||||||||||||||| ||||||    
T  11370635 aataataaatggttaagagtattataaaaaaaacacaatgaatatcatcaaaaataacaaaatttatttgatttctt 11370711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 14287118 - 14286989
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||| |  |||||||||||||||||| |  |||| | |||||| ||||||||||||||||||||| ||| ||||   ||| |||||   |||    
T  14287118 tgaaataataaaggggtaagggtattatagaaaaaag-cacagaatttcataaaaaataacaaaatttatttgatttattggcatgtgtaattttctcaa 14287020  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    ||   ||| ||||| ||||||||||||||||    
T  14287019 aaactacaagtattgtgaaacggagggagta 14286989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 4147959 - 4147923
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaatatttat 139  Q
    ||||||||||||||||||||||||||||| |||||||    
T  4147959 tggacatgtattttgaaacggagggagtattatttat 4147923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 134
Target Start/End: Original strand, 25476042 - 25476073
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaata 134  Q
    ||||||||||||||||||||||||||||||||    
T  25476042 tggacatgtattttgaaacggagggagtaata 25476073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 15064733 - 15064695
Alignment:
Q  93 ttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  15064733 ttctccaaaatggacaagtattatgaaacggagggagta 15064695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 131
Target Start/End: Original strand, 17942682 - 17942720
Alignment:
Q  93 ttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  17942682 ttctccaaaatggacaagtattatgaaacggagggagta 17942720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 1814680 - 1814595
Alignment:
Q  46 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    ||||||||||||||||||| |||||||| ||||||| |  ||| |||||   |||||  |||| ||||| ||||||||| ||||||    
T  1814680 tttcatcaaaaataacaaagtttatttgatttcttgatatgtgtaattttctcaaaagcgacaagtattgtgaaacggatggagta 1814595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Original strand, 22055006 - 22055035
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaa 132  Q
    ||||||||||||||||||||||||||||||    
T  22055006 tggacatgtattttgaaacggagggagtaa 22055035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 136
Target Start/End: Complemental strand, 32671844 - 32671811
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaatatt 136  Q
    ||||||||||||||||||||||||||||| ||||    
T  32671844 tggacatgtattttgaaacggagggagtattatt 32671811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 33845469 - 33845502
Alignment:
Q  40 acatattttcatcaaaaataacaaaatttatttg 73  Q
    ||||| ||||||||||||||||||||||||||||    
T  33845469 acataatttcatcaaaaataacaaaatttatttg 33845502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 18668716 - 18668688
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  18668716 tggacatgtattttgaaacggagggagta 18668688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 18668922 - 18668950
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  18668922 tggacatgtattttgaaacggagggagta 18668950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 19087986 - 19087958
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  19087986 tggacatgtattttgaaacggagggagta 19087958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 19088192 - 19088220
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  19088192 tggacatgtattttgaaacggagggagta 19088220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 20437045 - 20437017
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  20437045 tggacatgtattttgaaacggagggagta 20437017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 24623969 - 24623941
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  24623969 tggacatgtattttgaaacggagggagta 24623941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 32414913 - 32414941
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  32414913 tggacatgtattttgaaacggagggagta 32414941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 32420754 - 32420782
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  32420754 tggacatgtattttgaaacggagggagta 32420782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 7e-68; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 21310555 - 21310425
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21310555 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 21310456  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||||    
T  21310455 aatggacatgtattttgaaacggagggagta 21310425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 25704781 - 25704651
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25704781 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 25704682  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||||    
T  25704681 aatggacatgtattttgaaacggagggagta 25704651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 24706394 - 24706524
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24706394 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 24706493  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||| ||||||    
T  24706494 aatggacatgtattttgaaacggatggagta 24706524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 12071691 - 12071561
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  12071691 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttattggttagtgcaatttctccaa 12071592  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||||    
T  12071591 aatggacatgtattttgaaacggagggagta 12071561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 14261174 - 14261044
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14261174 tgaaataataaattattaagggtattatagaaaacacacacatatttttatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 14261075  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||||    
T  14261074 aatggacatgtattttgaaacggagggagta 14261044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 22321414 - 22321544
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22321414 tgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 22321513  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||| ||||||    
T  22321514 aatggacatgtattttgaaacggaaggagta 22321544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 34324729 - 34324860
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaattt-atttggtttcttggttagtgcaatttctcca 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  34324729 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttaatttagtttcttggttagtgcaatttctcca 34324828  T
Q  100 aaatggacatgtattttgaaacggagggagta 131  Q
    ||||||||||||||||||||||||||||||||    
T  34324829 aaatggacatgtattttgaaacggagggagta 34324860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 40122632 - 40122762
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  40122632 tgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggttttttggttactgcaatttctccaa 40122731  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||||    
T  40122732 aatggacatgtattttgaaacggagggagta 40122762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 44568967 - 44568837
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||    
T  44568967 tgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggttttttggttagtgcaatttcttcaa 44568868  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||| ||||||    
T  44568867 aatggacatgtattttgaaacggaaggagta 44568837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 21661682 - 21661817
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  21661682 tgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataataaaatttatttggtttcttggttactgcaatttctccaa 21661781  T
Q  101 aatggacatgtattttgaaacggagggagtaatatt 136  Q
    |||||||||||||||||||| |||||||||| ||||    
T  21661782 aatggacatgtattttgaaagggagggagtattatt 21661817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 21670446 - 21670581
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  21670446 tgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataaaaaaatttatttggtttcttggttactgcaatttctccaa 21670545  T
Q  101 aatggacatgtattttgaaacggagggagtaatatt 136  Q
    |||||||||||||||||||| |||||||||| ||||    
T  21670546 aatggacatgtattttgaaagggagggagtattatt 21670581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 185 - 343
Target Start/End: Complemental strand, 6543434 - 6543267
Alignment:
Q  185 ttcagttggtcatttcttctttttctatttcactttaaccaatattcatcaaatccatccatgtcttctactaccaatcc---------tccttacaatg 275  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||             ||| | |    
T  6543434 ttcagttggtcatttcttcttttgctatttcactttaaccaatattcatcaaatccatccatgtcttctactaccaatccaaagagaaagagctacgacg 6543335  T
Q  276 tgtacttgggtttctgtgatgaagatgcgggttcttttgctttggaactctatacagctcttagttca 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6543334 tgtacttgggtttctgtgatgaagatgcgggttcttttgctttggaactctatacagctcttagttca 6543267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 50767994 - 50767871
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  50767994 tgaaataataaattattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttgattagtgcaatttctctaa 50767895  T
Q  101 aatggacatgtattttgaaacgga 124  Q
    |||| | |||||||||||||||||    
T  50767894 aatgaatatgtattttgaaacgga 50767871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 20249162 - 20249292
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 102  Q
    |||||||||||| |||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||| | |||||| |||||||    
T  20249162 aaataataaatggttaagggtattatagaaa-cacacacataatttcttcaaaaataacaaaatttatttggtttcttggttaatacaatttatccaaaa 20249260  T
Q  103 tggacatgtattttgaaacggagggagtaata 134  Q
    ||||||||||||||||||||||| ||||||||    
T  20249261 tggacatgtattttgaaacggagagagtaata 20249292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 31892364 - 31892240
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||| | || ||||||||||||||||||    || ||||||||||||||| |||||||||||| ||||||||||| ||||||||||  ||    
T  31892364 tgaaataataaatggtcaaaggtattatagaaaacaca----taatttcatcaaaaataataaaatttatttgatttcttggttactgcaatttctttaa 31892269  T
Q  101 aatggacatgtattttgaaacggagggag 129  Q
    |||| ||||||||||||| ||||||||||    
T  31892268 aatgaacatgtattttgatacggagggag 31892240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 1988150 - 1988036
Alignment:
Q  16 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattt 115  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| |||||| |||| |||||||||||| |||| ||||| |||||    
T  1988150 ttaagggtattatagaaaacacatacataatttcatcaaaaataataaaatttatttgatttcttagttactgcaatttctcc-aaatagacatatattt 1988052  T
Q  116 tgaaacggagggagta 131  Q
    | |||| || ||||||    
T  1988051 taaaacagatggagta 1988036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 26676714 - 26676846
Alignment:
Q  2 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 101  Q
    |||||||||||||| |||||||||||||||||| ||||  | | |||||| |||||| |||| ||||||||| || ||||||  ||| ||||||| ||||    
T  26676714 gaaataataaatgagtaagggtattatagaaaaaacacgaagaatttcataaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaa 26676813  T
Q  102 atggacatgtattttgaaacggagggagtaata 134  Q
    ||||| | ||||| |||||||||| ||||||||    
T  26676814 atggataagtattgtgaaacggagagagtaata 26676846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 20714495 - 20714577
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaa-cacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 83  Q
    |||||||||||||| |||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  20714495 tgaaataataaatggttaagg-tattatagaaaaacacacacatagtttcatcaaaaataacaaaatttatttgatttattggt 20714577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 6129095 - 6129225
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||||||||||||||| ||||||| | ||| | | ||| |||||||||||||||||||||||| ||||||| |  ||| ||||||  |||    
T  6129095 tgaaataataaatgattaagggtattgtagaaaaaatacaaagaattttatcaaaaataacaaaatttatttgatttcttgatatgtgtaatttcatcaa 6129194  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |   || | ||||| ||||||||||||||||    
T  6129195 aggcgataagtattatgaaacggagggagta 6129225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 32543610 - 32543532
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 80  Q
    ||||||||||||||||||||||||||||| |||| ||||| | | ||||||||||| |||||||| ||||||||||||||    
T  32543610 tgaaataataaatgattaagggtattata-aaaaaacacaaagaatttcatcaaaattaacaaaaattatttggtttctt 32543532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 19692853 - 19692723
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||| ||||| |||||||||||| ||||| | | |||||| |||||| |||| ||||||||| |||||||||  ||  ||||||| |||    
T  19692853 tgaaataataaatgagtaaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttggtatgtataatttcttcaa 19692754  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||| |  |||| |||||| |||| ||||    
T  19692753 aatggagaattattgtgaaacagaggaagta 19692723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 19703438 - 19703308
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||| ||||| |||||||||||| ||||| | | |||||| |||||| |||| ||||||||| |||||||||  ||  ||||||| |||    
T  19703438 tgaaataataaatgagtaaggatattatagaaaaaacacaaagaatttcataaaaaatgacaacatttatttgatttcttggtatgtataatttcttcaa 19703339  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||| |  |||| |||||| |||| ||||    
T  19703338 aatggagaattattgtgaaacagaggaagta 19703308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 34284171 - 34284234
Alignment:
Q  8 ataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 71  Q
    |||||| |||||||||||||||||||| | ||| ||| ||||||||||| ||||||||||||||    
T  34284171 ataaataattaagggtattatagaaaaaatacaaatagtttcatcaaaagtaacaaaatttatt 34284234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 19433386 - 19433351
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaatattta 138  Q
    ||||||||||||||||||||||||||||||||||||    
T  19433386 tggacatgtattttgaaacggagggagtaatattta 19433351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 19361700 - 19361662
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtatttt 116  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  19361700 cttggttactgcaatttctccaaaatggacatgtatttt 19361662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 48652349 - 48652268
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 83  Q
    ||||||||||||||| |||  || ||| |||||| | ||| | | |||||||||||||||||||||||||||| |||||||||    
T  48652349 tgaaataataaatgagtaaatgtgttaaagaaaa-atacaaagaatttcatcaaaaataacaaaatttatttgatttcttggt 48652268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 55209808 - 55209840
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaatat 135  Q
    |||||||||||||||||||||||||||||||||    
T  55209808 tggacatgtattttgaaacggagggagtaatat 55209840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 134
Target Start/End: Original strand, 2760961 - 2760992
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaata 134  Q
    ||||||||||||||||||||||||||||||||    
T  2760961 tggacatgtattttgaaacggagggagtaata 2760992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 133
Target Start/End: Complemental strand, 2760758 - 2760728
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaat 133  Q
    |||||||||||||||||||||||||||||||    
T  2760758 tggacatgtattttgaaacggagggagtaat 2760728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 343
Target Start/End: Complemental strand, 6524137 - 6524063
Alignment:
Q  269 tacaatgtgtacttgggtttctgtgatgaagatgcgggttcttttgctttggaactctatacagctcttagttca 343  Q
    ||||||||||||||| |||| ||  |  |||| ||||||||||||||| || ||||||| || ||||||||||||    
T  6524137 tacaatgtgtacttgagtttttgcaacaaagacgcgggttcttttgctctgcaactctacacggctcttagttca 6524063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 18507430 - 18507472
Alignment:
Q  21 ggtattatagaaaacacacacatattttcatcaaaaataacaa 63  Q
    |||||||||||||| ||||||| | ||||||||||||||||||    
T  18507430 ggtattatagaaaaaacacacaaaatttcatcaaaaataacaa 18507472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 124
Target Start/End: Original strand, 19362189 - 19362223
Alignment:
Q  90 aatttctccaaaatggacatgtattttgaaacgga 124  Q
    |||||||| ||||||||||||||||||||||||||    
T  19362189 aatttctctaaaatggacatgtattttgaaacgga 19362223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 20249052 - 20249006
Alignment:
Q  93 ttctccaaaatggacatgtattttgaaacggagggagtaatatttat 139  Q
    |||||||||||||||| ||||| |||||||||| ||||| |||||||    
T  20249052 ttctccaaaatggacaagtattatgaaacggagtgagtattatttat 20249006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 133
Target Start/End: Complemental strand, 55209602 - 55209572
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaat 133  Q
    |||||||||||||||||||||||||||||||    
T  55209602 tggacatgtattttgaaacggagggagtaat 55209572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 4467548 - 4467520
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  4467548 tggacatgtattttgaaacggagggagta 4467520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 133
Target Start/End: Original strand, 12071799 - 12071839
Alignment:
Q  93 ttctccaaaatggacatgtattttgaaacggagggagtaat 133  Q
    ||||| |||||||||| ||||| ||||||||||||||||||    
T  12071799 ttctctaaaatggacaagtattatgaaacggagggagtaat 12071839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 26170014 - 26169986
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  26170014 tggacatgtattttgaaacggagggagta 26169986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 26170221 - 26170249
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  26170221 tggacatgtattttgaaacggagggagta 26170249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 29830371 - 29830343
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  29830371 tggacatgtattttgaaacggagggagta 29830343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 35381128 - 35381156
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  35381128 tggacatgtattttgaaacggagggagta 35381156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 38416678 - 38416650
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  38416678 tggacatgtattttgaaacggagggagta 38416650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 38416884 - 38416912
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  38416884 tggacatgtattttgaaacggagggagta 38416912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 44232105 - 44232077
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  44232105 tggacatgtattttgaaacggagggagta 44232077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 45292066 - 45292094
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  45292066 tggacatgtattttgaaacggagggagta 45292094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 47386520 - 47386548
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  47386520 tggacatgtattttgaaacggagggagta 47386548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1431 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold1431
Description:

Target: scaffold1431; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 46 - 176
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 145  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    ||||||||||||||||||||||||| |||||    
T  146 aatggacatgtattttgaaacggagagagta 176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 127; Significance: 2e-65; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 2540078 - 2540208
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2540078 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 2540177  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||| ||||    
T  2540178 aatggacatgtattttgaaacggaggaagta 2540208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 3585581 - 3585451
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3585581 tgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 3585482  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||||    
T  3585481 aatggacatgtattttgaaacggagggagta 3585451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 11174370 - 11174500
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11174370 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 11174469  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||| ||||||||||||||||||||||||||    
T  11174470 aatgaacatgtattttgaaacggagggagta 11174500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 40058450 - 40058580
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  40058450 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccga 40058549  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||||    
T  40058550 aatggacatgtattttgaaacggagggagta 40058580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 11646472 - 11646602
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11646472 tgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 11646571  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||| ||||||||    
T  11646572 aatggacatgtattttgaaacgaagggagta 11646602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 43275546 - 43275675
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43275546 tgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 43275643  T
Q  101 aatggacatgtattttgaaacggagggagtaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  43275644 aatggacatgtattttgaaacggagggagtaa 43275675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 37345701 - 37345570
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||    
T  37345701 tgaaataataaatgattaagggtattatagaaaacacacacatattttcattaaaaataacaaaatttatttggtttcttggttggtgcaatttcttcaa 37345602  T
Q  101 aatggacatgtattttgaaacggagggagtaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  37345601 aatggacatgtattttgaaacggagggagtaa 37345570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 7147043 - 7146913
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  7147043 tgaaataataaatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttactgcaatttcttcaa 7146944  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||| ||||||    
T  7146943 aatggacatgtattttgaaacggaaggagta 7146913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 40918878 - 40919006
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||  | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40918878 tgaaataataaatgattaagggtattatagaaaacacaca--tgttttcataaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 40918975  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||||    
T  40918976 aatggacatgtattttgaaacggagggagta 40919006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 36068210 - 36068072
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  36068210 tgaaataattaatgattaagggtattatagaaaacacacatatattttcattaaaaataacaaaatttatttggttttttggttagtacaattcctccaa 36068111  T
Q  101 aatggacatgtattttgaaacggagggagtaatatttat 139  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  36068110 aatggacatgtattttgaaacggagggagtaatttttat 36068072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 30999670 - 30999791
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30999670 tgaaataataaatgattaagggtattatagaaaacac--acatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 30999767  T
Q  101 aatggacatgtattttgaaacgga 124  Q
    ||| ||||||||||||||||||||    
T  30999768 aattgacatgtattttgaaacgga 30999791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 27035126 - 27034995
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||| |||||||||||||||||| |||| ||||| ||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||    
T  27035126 tgaaataataaatggttaagggtattatagaaa-cacagacataatttcatcaaaaataaaaaaaattatttggtttcttggttactgcaatttctccaa 27035028  T
Q  101 aatggacatgtattttgaaacggagggagtaat 133  Q
    |||||||||||||||||||||||||||||||||    
T  27035027 aatggacatgtattttgaaacggagggagtaat 27034995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 20546436 - 20546566
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||  |||||||||| ||| ||||||||||  || |||||||||||||||||||||||||||  ||||||| ||  |||||||||| |||    
T  20546436 tgaaataataaattgttaagggtatcatataaaacacaca--taatttcatcaaaaataacaaaatttatttaatttcttgattgttgcaatttcttcaa 20546533  T
Q  101 aatggacatgtattttgaaacggagggagtaat 133  Q
    ||||||||| |||||||||| ||||||||||||    
T  20546534 aatggacatatattttgaaatggagggagtaat 20546566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 28562552 - 28562421
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaaca-cacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctcca 99  Q
    |||||| |||||||| |||||||||||||||||| | |||| | | ||||||||||||| |||| ||||||||| || ||||||  ||| ||||||| ||    
T  28562552 tgaaatcataaatgagtaagggtattatagaaaaaaacacaaagaatttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttcttca 28562453  T
Q  100 aaatggacatgtattttgaaacggagggagta 131  Q
    ||||||||| ||||||||||||||||| ||||    
T  28562452 aaatggacaagtattttgaaacggaggaagta 28562421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 45278701 - 45278761
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaatattta 138  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45278701 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagtaatattta 45278761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 8697898 - 8697951
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8697898 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 8697951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 13881101 - 13881174
Alignment:
Q  1 tgaaataataaatgattaagggtattatag-aaaacacacacatattttcatcaaaaataacaaaatttatttg 73  Q
    |||||||||||||||||||||||||||||| |||| || |||| | ||||||||||||||||||||||||||||    
T  13881101 tgaaataataaatgattaagggtattatagaaaaaaacgcacacaatttcatcaaaaataacaaaatttatttg 13881174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 41307961 - 41308014
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  41307961 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 41308014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 35866742 - 35866616
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 102  Q
    |||||||||||| ||||||||||||||||||| ||||| | | |||||| ||||||||||| |||||| |  |||||||||   |  |||||||  ||||    
T  35866742 aaataataaatgtttaagggtattatagaaaaaacacaaagaatttcatgaaaaataacaacatttatctaatttcttggtatatataatttctttaaaa 35866643  T
Q  103 tggacatgtattttgaaacggagggag 129  Q
    |||||| ||||| ||||||||| ||||    
T  35866642 tggacaagtattgtgaaacggaaggag 35866616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 40486453 - 40486507
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 132  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  40486453 cttggttactgcaatttcttcaaaatggacatgtattttgaaacggagggagtaa 40486507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 10646645 - 10646592
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  10646645 cttggttactgcaatttctccaaaatggacatgtattttgaaacggaggaagta 10646592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 28326804 - 28326883
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 83  Q
    |||||||||||||  ||||| ||||||| |||||   ||||||| |||||||||||||||||||||||||||| |||||||||    
T  28326804 tgaaataataaatagttaagagtattattgaaaa---acacataatttcatcaaaaataacaaaatttatttgatttcttggt 28326883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 28568049 - 28567919
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaac-acacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctcca 99  Q
    |||||||||||||||  | |||||||||||||||  ||||| | | |||||| |||||| |||| ||||||||| ||  |||||  ||| ||||||| ||    
T  28568049 tgaaataataaatgagca-gggtattatagaaaaagacacaaagaatttcataaaaaatgacaacatttatttgattcattggtatgtgtaatttcttca 28567951  T
Q  100 aaatggacatgtattttgaaacggagggagta 131  Q
    ||||||||| ||||||||||||||||| ||||    
T  28567950 aaatggacaagtattttgaaacggaggaagta 28567919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 28575642 - 28575512
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaac-acacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctcca 99  Q
    |||||||||||||||  | |||||||||||||||  ||||| | | |||||| |||||| |||| ||||||||| ||  |||||  ||| ||||||| ||    
T  28575642 tgaaataataaatgagca-gggtattatagaaaaagacacaaagaatttcataaaaaatgacaacatttatttgattcattggtatgtgtaatttcttca 28575544  T
Q  100 aaatggacatgtattttgaaacggagggagta 131  Q
    ||||||||| ||||||||||||||||| ||||    
T  28575543 aaatggacaagtattttgaaacggaggaagta 28575512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 37510396 - 37510314
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 83  Q
    ||||||| |||||||||||||||||||| ||||| | | | | | ||| || |||||||||||||||||||| ||||||||||    
T  37510396 tgaaatattaaatgattaagggtattattgaaaaaatagaaagaattttattaaaaataacaaaatttatttagtttcttggt 37510314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 41305803 - 41305762
Alignment:
Q  90 aatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| ||||||||||||||||||||||||||| |||||    
T  41305803 aatttctctaaaatggacatgtattttgaaacggagagagta 41305762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 40918769 - 40918725
Alignment:
Q  93 ttctccaaaatggacatgtattttgaaacggagggagtaatattt 137  Q
    ||||| |||||||||| ||||| ||||||||||||||||||||||    
T  40918769 ttctctaaaatggacaagtattatgaaacggagggagtaatattt 40918725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 10181004 - 10181074
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 72  Q
    |||||||||||||| |||| ||||||||| |||| ||| || || ||| || ||||||||||||||||||||    
T  10181004 tgaaataataaatggttaacggtattata-aaaaaacaaacgtaattttataaaaaataacaaaatttattt 10181074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 139
Target Start/End: Original strand, 7147152 - 7147198
Alignment:
Q  93 ttctccaaaatggacatgtattttgaaacggagggagtaatatttat 139  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||||    
T  7147152 ttctctaaaatggacaagtattatgaaacggagggagtagtatttat 7147198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 137
Target Start/End: Original strand, 32998674 - 32998708
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaatattt 137  Q
    |||||||||||||||||||| ||||||||||||||    
T  32998674 tggacatgtattttgaaacgaagggagtaatattt 32998708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 39151533 - 39151464
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttg 73  Q
    |||||||||||||| ||   |||||||||||| | | ||||| ||||||||||||||||||| ||||||||    
T  39151533 aaataataaatgataaattatattatagaaaaaa-atacataatttcatcaaaaataacaaagtttatttg 39151464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Complemental strand, 132045 - 132016
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaa 132  Q
    ||||||||||||||||||||||||||||||    
T  132045 tggacatgtattttgaaacggagggagtaa 132016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 30906837 - 30906917
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacac--acatattttcatcaaaaataacaaaatttatttggtttcttg 81  Q
    |||||||||||| |||||| | | |||||||| | ||  ||| | |||||| ||||||||||||||||||||| |||||||    
T  30906837 aaataataaatggttaaggttttcatagaaaaaaaactcacaaaatttcataaaaaataacaaaatttatttgatttcttg 30906917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 43275437 - 43275392
Alignment:
Q  93 ttctccaaaatggacatgtattttgaaacggagggagtaatattta 138  Q
    ||||| |||||||||| ||||| |||||||||||||||| ||||||    
T  43275437 ttctctaaaatggacaagtattatgaaacggagggagtattattta 43275392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 45278053 - 45278013
Alignment:
Q  90 aatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| ||||||||||||||||||||||| |||||||||    
T  45278053 aatttctctaaaatggacatgtattttgaaac-gagggagta 45278013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 616811 - 616783
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  616811 tggacatgtattttgaaacggagggagta 616783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 617017 - 617045
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  617017 tggacatgtattttgaaacggagggagta 617045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 623204 - 623176
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  623204 tggacatgtattttgaaacggagggagta 623176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 623410 - 623438
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  623410 tggacatgtattttgaaacggagggagta 623438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Complemental strand, 5878349 - 5878317
Alignment:
Q  99 aaaatggacatgtattttgaaacggagggagta 131  Q
    ||||||||||||||||| |||||||||||||||    
T  5878349 aaaatggacatgtatttggaaacggagggagta 5878317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 14237514 - 14237542
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  14237514 tggacatgtattttgaaacggagggagta 14237542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 40494618 - 40494646
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  40494618 tggacatgtattttgaaacggagggagta 40494646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 42587482 - 42587510
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  42587482 tggacatgtattttgaaacggagggagta 42587510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 2e-65; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 12807000 - 12807130
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12807000 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttaatgcaatttctccaa 12807099  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||||    
T  12807100 aatggacatgtattttgaaacggagggagta 12807130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 25773779 - 25773649
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25773779 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaa 25773680  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||||    
T  25773679 aatggacatgtattttgaaacggagggagta 25773649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 30720639 - 30720772
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30720639 tgaaataatagatgattaagggtattataaaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 30720738  T
Q  101 aatggacatgtattttgaaacggagggagtaata 134  Q
    ||||||||||||||||||||||||||||||||||    
T  30720739 aatggacatgtattttgaaacggagggagtaata 30720772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 10285204 - 10285334
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  10285204 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttagtttcttggttaatgcaatttctccaa 10285303  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    ||| ||||| |||||||||||||||||||||    
T  10285304 aatagacatctattttgaaacggagggagta 10285334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 40886757 - 40886887
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  40886757 tgaaataataaatgattaagggtattatagaaaatacacacatattttcatcaaaaataacaaaatttattcgatttcttggttagtgcaatttctccaa 40886856  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||| ||||||||||||||||||| ||||||    
T  40886857 aatgaacatgtattttgaaacggatggagta 40886887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 36561246 - 36561383
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| || ||    
T  36561246 tgaaataataaatggttaaaggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgattactgcaatttttctaa 36561345  T
Q  101 aatggacatgtattttgaaacggagggagtaatattta 138  Q
    |||||||||||||||||||||||| |||||||||||||    
T  36561346 aatggacatgtattttgaaacggatggagtaatattta 36561383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 37900771 - 37900901
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||||||||| ||||||||||||||    
T  37900771 tgaaataataaatggttaagggtattatagaaaacacacatataatttcatcaaaaatatcaaaatttatttagtttcttggttactgcaatttctccaa 37900870  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    ||||||  |||||||||||||||||||||||    
T  37900871 aatggatgtgtattttgaaacggagggagta 37900901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 7277569 - 7277688
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||| |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| | ||||||||||||    
T  7277569 tgaaataataaatggttaaaggtattatagaaaacacacacataatttgatcaaaaataacaaaatttatttggtttattggttactccaatttctccaa 7277668  T
Q  101 aatggacatgtattttgaaa 120  Q
    ||| ||||||||||||||||    
T  7277669 aatagacatgtattttgaaa 7277688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 25683377 - 25683467
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatt 93  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||    
T  25683377 aaataataaatggttaagggtattatagaaaacacacacataattttatcaaaaataacaaaatttatttggtttcttggttattgcaatt 25683467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 16983380 - 16983258
Alignment:
Q  11 aatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaat--ttatttggtttcttggttagtgcaatttctccaaaatggaca 108  Q
    |||| ||||||||||| ||||||| ||||| ||  |||||||||||| || ||||   ||||||||||||||||||| ||||||||||||||||||||||    
T  16983380 aatggttaagggtattgtagaaaaaacacatatcatttcatcaaaaaaaaaaaaaaaattatttggtttcttggttactgcaatttctccaaaatggaca 16983281  T
Q  109 tgtattttgaaacggagggagta 131  Q
    ||||||||||||| |||||||||    
T  16983280 tgtattttgaaacagagggagta 16983258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 734485 - 734625
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||| |||||||||||||||||| ||||| | | ||||||||| ||| |||||||||||||| ||  |||||  | | ||||||| |||    
T  734485 tgaaataataaatgagtaagggtattatagaaaa-acacaaagaatttcatcaataatgacaaaatttatttgattctttggtatgagtaatttcttcaa 734583  T
Q  101 aatggacatgtattttgaaacggagggagtaatatttatacc 142  Q
    |||||||| ||||| ||||||||||||| || ||||||||||    
T  734584 aatggacaagtattgtgaaacggagggaatattatttatacc 734625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 23098386 - 23098461
Alignment:
Q  6 taataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 81  Q
    ||||||||| ||||||||||||||| |||||  |||||| ||||||||||||||||||||||||||| ||||||||    
T  23098386 taataaatggttaagggtattataggaaacatgcacataatttcatcaaaaataacaaaatttatttagtttcttg 23098461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 30403108 - 30403191
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacaca-cacatattttcatcaaaaataacaaaatttatttggtttcttggt 83  Q
    |||||||| ||||||||||| ||||||||||||| | | |||| | ||||||||||||||||||||||||||||||||||||||    
T  30403108 tgaaataacaaatgattaagagtattatagaaaaaaaaacacagaatttcatcaaaaataacaaaatttatttggtttcttggt 30403191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 39071013 - 39070883
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacac-acatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctcca 99  Q
    ||||||||||||||| |||||||||||||||||| |||| ||| | ||||||||||||| |||| ||||||||| || |||  |  ||| ||||||| ||    
T  39071013 tgaaataataaatgagtaagggtattatagaaaaaacacaacaga-tttcatcaaaaatgacaacatttatttgattccttaatatgtgtaatttcttca 39070915  T
Q  100 aaatggacatgtattttgaaacggagggagta 131  Q
    ||||| ||| ||||| ||||||||||||||||    
T  39070914 aaatgaacaagtattgtgaaacggagggagta 39070883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 11319689 - 11319553
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||| |||||||||||||||||| | ||| | | |||||| |||||| |||| ||||||||| ||  || ||  ||| ||||||| |||    
T  11319689 tgaaataataaatgagtaagggtattatagaaaaaaaacaaagaatttcataaaaaattacaacatttatttgattcattagtatgtgtaatttcttcaa 11319590  T
Q  101 aatggacatgtattttgaaacggagggagtaatattt 137  Q
    ||||||||  |||| ||||||||||| |||| |||||    
T  11319589 aatggacaaatattgtgaaacggaggaagtattattt 11319553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 15305216 - 15305265
Alignment:
Q  82 gttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15305216 gttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 15305265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1056429 - 1056498
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatt 71  Q
    |||||||||||||||| ||  ||||||||||||| ||||| | | |||||| |||||||||||||||||||    
T  1056429 tgaaataataaatgatcaatagtattatagaaaa-acacaaagaatttcattaaaaataacaaaatttatt 1056498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 8086264 - 8086301
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaatatttata 140  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  8086264 tggacatgtattttgaaacggagggagtattatttata 8086301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 15304863 - 15304822
Alignment:
Q  90 aatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| |||||||||||||||||| ||||||||||||||    
T  15304863 aatttctctaaaatggacatgtattttaaaacggagggagta 15304822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 11796559 - 11796451
Alignment:
Q  23 tattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacg 122  Q
    |||||||||| | ||||| | | |||||||||||||||||||||| ||||  |||||||||   || ||||||| |||||  |||| ||| | ||||| |    
T  11796559 tattatagaacaaacacatagaatttcatcaaaaataacaaaattaatttaatttcttggtatctgtaatttcttcaaaaatgacaagtagtgtgaaaag 11796460  T
Q  123 gagggagta 131  Q
    |||||||||    
T  11796459 gagggagta 11796451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 134
Target Start/End: Original strand, 33387453 - 33387484
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaata 134  Q
    ||||||||||||||||||||||||||||||||    
T  33387453 tggacatgtattttgaaacggagggagtaata 33387484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 16054240 - 16054173
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 72  Q
    |||||||||||| | |||| |||||||||||| ||||| |   |||||| ||||||||||||||||||||    
T  16054240 aaataataaatggtcaaggatattatagaaaaaacacaaaa--tttcataaaaaataacaaaatttattt 16054173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 25683267 - 25683229
Alignment:
Q  93 ttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  25683267 ttctccaaaatggacaagtattatgaaacggagggagta 25683229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Original strand, 978311 - 978340
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaa 132  Q
    ||||||||||||||||||||||||||||||    
T  978311 tggacatgtattttgaaacggagggagtaa 978340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 40156226 - 40156189
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaatatttata 140  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  40156226 tggatatgtattttgaaacggagggagtagtatttata 40156189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 978105 - 978077
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  978105 tggacatgtattttgaaacggagggagta 978077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 9502655 - 9502627
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  9502655 tggacatgtattttgaaacggagggagta 9502627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 14634185 - 14634157
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  14634185 tggacatgtattttgaaacggagggagta 14634157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 133
Target Start/End: Original strand, 24992374 - 24992402
Alignment:
Q  105 gacatgtattttgaaacggagggagtaat 133  Q
    |||||||||||||||||||||||||||||    
T  24992374 gacatgtattttgaaacggagggagtaat 24992402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 40886648 - 40886604
Alignment:
Q  93 ttctccaaaatggacatgtattttgaaacggagggagtaatattt 137  Q
    ||||| |||||||||| ||||| |||||||||||||||| |||||    
T  40886648 ttctctaaaatggacaagtattatgaaacggagggagtagtattt 40886604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 2e-65; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 13364973 - 13364843
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13364973 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 13364874  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||| ||||||||||||||||||||||||||    
T  13364873 aatgaacatgtattttgaaacggagggagta 13364843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 46694257 - 46694391
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  46694257 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttgattagtgcaatttctccaa 46694356  T
Q  101 aatggacatgtattttgaaacggagggagtaatat 135  Q
    || ||||||||||||||||||||||||||||||||    
T  46694357 aaaggacatgtattttgaaacggagggagtaatat 46694391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 198985 - 198852
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  198985 tgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggtcagtgcaatttctccaa 198886  T
Q  101 aatggacatgtattttgaaacggagggagtaata 134  Q
    ||||||||||||||||||||||||||||||||||    
T  198885 aatggacatgtattttgaaacggagggagtaata 198852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 19241815 - 19241945
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19241815 tgaaataataaatgattaagggtattatagaaaacacacatatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttcaccaa 19241914  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||||    
T  19241915 aatggacatgtattttgaaacggagggagta 19241945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 29375267 - 29375138
Alignment:
Q  2 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaa 101  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  29375267 gaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataagaaaatttatttggtttcttggttactgcaatttctccaaa 29375168  T
Q  102 atggacatgtattttgaaacggagggagta 131  Q
    ||||||||||||||||||||||||||||||    
T  29375167 atggacatgtattttgaaacggagggagta 29375138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 36881410 - 36881281
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36881410 tgaaataataaataattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 36881313  T
Q  101 aatggacatgtattttgaaacggagggagtaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  36881312 aatggacatgtattttgaaacggagggagtaa 36881281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 23088078 - 23088209
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  23088078 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttcttcaa 23088177  T
Q  101 aatggacatgtattttgaaacggagggagtaa 132  Q
    ||| ||||| ||||||||||| ||||||||||    
T  23088178 aatagacatatattttgaaacagagggagtaa 23088209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 3383206 - 3383076
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3383206 tgaaataataaatgtttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttactgcaatttctccaa 3383107  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    ||||||||| |||||||||||||| ||||||    
T  3383106 aatggacatatattttgaaacggaaggagta 3383076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 43750267 - 43750137
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  43750267 tgaaataataaatggttaagtgtattatagaaaacacacatataatttcatcaaaaataacaaaatttatttggtttcttggttactccaatttctccaa 43750168  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||| ||||||||    
T  43750167 aatggacatgtattttgaaacgaagggagta 43750137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 32835129 - 32835226
Alignment:
Q  27 atagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacgga 124  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32835129 atagaaaacacacacataatttcatcaaaaataacaaaatttatttgttttcttggttattgcaatttctccaaaatggacatgtattttgaaacgga 32835226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 131
Target Start/End: Complemental strand, 13702890 - 13702769
Alignment:
Q  10 aaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacat 109  Q
    ||||| |||| |||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| | |||    
T  13702890 aaatggttaaaggtattatagaaaacaaacatataatttcatcaaaaatatcaaaatttatttggtttcttggttactgcaatttctccaaaataggcat 13702791  T
Q  110 gtattttgaaacggagggagta 131  Q
    ||||||| ||| ||| ||||||    
T  13702790 gtattttaaaatggatggagta 13702769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 53 - 131
Target Start/End: Original strand, 27707363 - 27707441
Alignment:
Q  53 aaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  27707363 aaaaataacaaaatttatttggtttcttggttactgcaatttctccaaaatggacatgtatttcgaaacggagggagta 27707441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 12094635 - 12094582
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12094635 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 12094582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19897074 - 19897152
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttct 79  Q
    |||||||||||| || |||||||||||||||||| ||||| | | |||||| ||||||||||||||||||||| |||||    
T  19897074 tgaaataataaaagagtaagggtattatagaaaaaacacaaagaatttcataaaaaataacaaaatttatttgatttct 19897152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 19911562 - 19911508
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagtaa 132  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  19911562 cttggttactgcaatttctccaaaatgaacatgtattttgaaacggagggagtaa 19911508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 37293522 - 37293437
Alignment:
Q  46 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    ||||||||||||| |||| ||||||||| || ||||||  ||| ||||||| ||||||||||| ||||| ||||||||||||||||    
T  37293522 tttcatcaaaaatgacaacatttatttgattccttggtatgtgtaatttcttcaaaatggacaagtattgtgaaacggagggagta 37293437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 44277455 - 44277508
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  44277455 cttggttactgcaatttctccaaaatagacatgtattttgaaacggagggagta 44277508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 37781067 - 37780996
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 72  Q
    |||||||||||||| ||||  ||||||||||||| ||||||| | ||||||||||||||| |||||||||||    
T  37781067 tgaaataataaatggttaatagtattatagaaaaaacacacagaatttcatcaaaaataataaaatttattt 37780996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 38805298 - 38805245
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  38805298 cttggttactgcaatttctctaaaatggacatgtattttaaaacggagggagta 38805245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 48820444 - 48820512
Alignment:
Q  46 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtatt 114  Q
    |||||||||||||||||||||||||||||||| |||| ||  | ||||||||||||||  |||||||||    
T  48820444 tttcatcaaaaataacaaaatttatttggtttattggataccgtaatttctccaaaataaacatgtatt 48820512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 44276816 - 44276770
Alignment:
Q  90 aatttctccaaaatggacatgtattttgaaacggagggagtaatatt 136  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  44276816 aatttctctaaaatggacatgtattttgaaacggagagagtaatatt 44276770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 48963223 - 48963156
Alignment:
Q  62 aaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||| ||||||| ||| ||||||||  ||||||||||||||| || ||||||||||||||||||||||||    
T  48963223 aaaaattatttgatttattggttag--caatttctccaaaatagatatgtattttgaaacggagggagta 48963156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 1455297 - 1455374
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttctt 80  Q
    |||||||||||| | ||| | ||||||||| | ||||| ||| ||| |||||||||||||||||||||||| ||||||    
T  1455297 aaataataaatggtgaagagaattatagaagaaacacaaataattttatcaaaaataacaaaatttatttgatttctt 1455374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 19912174 - 19912215
Alignment:
Q  90 aatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  19912174 aatttctctaaaatggacatgtattttgaaacggagggagta 19912215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 38806341 - 38806382
Alignment:
Q  90 aatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  38806341 aatttctctaaaatggacatgtattttgaaacggagggagta 38806382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 54086683 - 54086577
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||| ||| |||||||||||||||||| | ||| | | ||||||||| ||| |||| ||||||||| || |||||   ||| ||||||| |||    
T  54086683 tgaaataataa-tgagtaagggtattatagaaaaaatacaaagaatttcatcaataatgacaacatttatttgattccttggcatgtgtaatttcttcaa 54086585  T
Q  101 aatggaca 108  Q
    ||||||||    
T  54086584 aatggaca 54086577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 19823928 - 19823894
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaatattt 137  Q
    |||||||||||||||||||||||||||||||||||    
T  19823928 tggacatgtattttgaaacggagggagtaatattt 19823894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 4235803 - 4235751
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||  |||||||||||||||||| || |||||    
T  4235803 cttggttagtgcaatttctccaaaa-cgacatgtattttgaaacgaagtgagta 4235751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 12095423 - 12095464
Alignment:
Q  90 aatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  12095423 aatttctctaaaatggacatatattttgaaacggagggagta 12095464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 18356014 - 18356134
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||| |||||||| |||||||||||||||||| ||||| | | ||||| ||||| | |||| || |||||  || |||||   ||| ||||| | |||    
T  18356014 tgaaatgataaatgagtaagggtattatagaaaaaacacaaagaatttcaccaaaactgacaacatgtatttaattccttggcatgtgtaattttttcaa 18356113  T
Q  101 aatggacatgtattttgaaac 121  Q
    |||||| ||||||| ||||||    
T  18356114 aatggatatgtattgtgaaac 18356134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 17755284 - 17755221
Alignment:
Q  2 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaa 65  Q
    |||||||||||||||||| | |||||||||||| ||||| |||  ||||| |||||||| ||||    
T  17755284 gaaataataaatgattaaagatattatagaaaaaacacaaataaattcataaaaaataaaaaaa 17755221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 19056604 - 19056541
Alignment:
Q  2 gaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaa 65  Q
    |||||||||||||||||| | |||||||||||| ||||| |||  ||||| |||||||| ||||    
T  19056604 gaaataataaatgattaaagatattatagaaaaaacacaaataaattcataaaaaataaaaaaa 19056541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 44522567 - 44522491
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 81  Q
    |||||||||||| ||||  ||||||||||||| |||||  |  |||||| |||||||| |||||||||||| |||||||    
T  44522567 aaataataaatggttaaaagtattatagaaaaaacaca--tgatttcataaaaaataataaaatttatttgatttcttg 44522491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 133
Target Start/End: Original strand, 13499569 - 13499599
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaat 133  Q
    |||||||||||||||||||||||||||||||    
T  13499569 tggacatgtattttgaaacggagggagtaat 13499599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 133
Target Start/End: Original strand, 42761717 - 42761747
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaat 133  Q
    |||||||||||||||||||||||||||||||    
T  42761717 tggacatgtattttgaaacggagggagtaat 42761747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 53559802 - 53559880
Alignment:
Q  46 tttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaatggacatgtattttgaaacgga 124  Q
    |||||||||||||||||| ||||||||| ||||||| |  ||| ||||||| |||||   ||| ||||| |||||||||    
T  53559802 tttcatcaaaaataacaacatttatttgttttcttgatatgtgtaatttcttcaaaagcaacaagtattgtgaaacgga 53559880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 20765224 - 20765187
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaatatttata 140  Q
    |||||||||||||| |||||||||||||| ||||||||    
T  20765224 tggacatgtattttaaaacggagggagtattatttata 20765187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 24064352 - 24064283
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 72  Q
    ||||||||||||  |||||||||||||||||| |||||   | ||| || ||| ||||||||||||||||    
T  24064352 aaataataaatgggtaagggtattatagaaaaaacacagtgaattttataaaatataacaaaatttattt 24064283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 27707136 - 27707177
Alignment:
Q  2 gaaataataaatgattaagggtattatagaaaacacacacat 43  Q
    ||||||||||||| |||||| |||||||||||||||| ||||    
T  27707136 gaaataataaatggttaaggatattatagaaaacacatacat 27707177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 52805175 - 52805244
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 72  Q
    ||||||||||||  |||| ||||||||||||| |  || | | ||||||||||||| |||||||||||||    
T  52805175 aaataataaatgtgtaagagtattatagaaaaaatgcaaacaatttcatcaaaaatgacaaaatttattt 52805244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 4226759 - 4226716
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacg 122  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||    
T  4226759 cttggttactgcaatttctccaaaa-cgacatgtattttgaaacg 4226716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 6910568 - 6910596
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  6910568 tggacatgtattttgaaacggagggagta 6910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 20765430 - 20765458
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  20765430 tggacatgtattttgaaacggagggagta 20765458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 27010502 - 27010474
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  27010502 tggacatgtattttgaaacggagggagta 27010474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 27010708 - 27010736
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  27010708 tggacatgtattttgaaacggagggagta 27010736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 42490430 - 42490458
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  42490430 tggacatgtattttgaaacggagggagta 42490458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 42761511 - 42761483
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  42761511 tggacatgtattttgaaacggagggagta 42761483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 44562020 - 44562052
Alignment:
Q  105 gacatgtattttgaaacggagggagtaatattt 137  Q
    ||||||||||||||| |||||||||||||||||    
T  44562020 gacatgtattttgaatcggagggagtaatattt 44562052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 2e-65; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 3519038 - 3518908
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3519038 tgaaataataaattattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 3518939  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||||    
T  3518938 aatggacatgtattttgaaacggagggagta 3518908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 39938300 - 39938170
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39938300 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 39938201  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    ||||| |||||||||||||||||||||||||    
T  39938200 aatggtcatgtattttgaaacggagggagta 39938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 23366919 - 23366790
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23366919 tgaaataataaatgattaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 23366820  T
Q  101 aatggacatgtattttgaaacggagggagt 130  Q
    ||||||||||||||||||||||||||||||    
T  23366819 aatggacatgtattttgaaacggagggagt 23366790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 1102633 - 1102503
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1102633 tgaaataataaatggttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttactgcaatttctccaa 1102534  T
Q  101 aatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||||    
T  1102533 aatggacatgtattttgaaacggagggagta 1102503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 37673887 - 37674014
Alignment:
Q  4 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaat 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37673887 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttgatttcttggttagtgcaatttctccaaaat 37673986  T
Q  104 ggacatgtattttgaaacggagggagta 131  Q
    | ||||||||||||||||||||||||||    
T  37673987 gaacatgtattttgaaacggagggagta 37674014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 12969888 - 12970016
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 102  Q
    |||||||||||| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12969888 aaataataaatggttaagggtattatagaaaatatacacataatttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 12969987  T
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  12969988 tggacatgtattttgaaacggagggagta 12970016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 1646417 - 1646317
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||    
T  1646417 tgaaataataaatgattaagggtattatagaaaacacaca--tattttcatcaaaaataacaaaatttatttagtttcttggttgctgcaatttctccaa 1646320  T
Q  101 aat 103  Q
    |||    
T  1646319 aat 1646317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22388282 - 22388335
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaa 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22388282 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaa 22388335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 34224378 - 34224431
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34224378 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 34224431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 35179097 - 35179164
Alignment:
Q  16 ttaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 83  Q
    |||||| |||||||||||| ||||||| | |||||||||||||||||||||||||||  |||||||||    
T  35179097 ttaaggttattatagaaaaaacacacaaaatttcatcaaaaataacaaaatttatttcatttcttggt 35179164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 14779907 - 14779838
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttattt 72  Q
    ||||||||||||||| ||||  |||||||||||| ||||| ||| ||||||||||||||| |||||||||||    
T  14779907 tgaaataataaatgagtaag--tattatagaaaaaacacaaataatttcatcaaaaataaaaaaatttattt 14779838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 19976459 - 19976380
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 83  Q
    |||||||||||   |||||||||||||||||| | ||||||| ||| ||||||| || ||||||||||||| |||||||||    
T  19976459 aaataataaataggtaagggtattatagaaaaaa-acacataattttatcaaaagtaccaaaatttatttgatttcttggt 19976380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 39562037 - 39562162
Alignment:
Q  4 aataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaat 103  Q
    ||||||||||| ||||||||||||  ||||| ||| | ||| |||| ||||||||||||||||||||||| ||| ||| |  ||| ||||||   ||||     
T  39562037 aataataaatggttaagggtatta--gaaaaaacaaaaataatttcttcaaaaataacaaaatttatttgattttttgatatgtgtaatttccttaaaag 39562134  T
Q  104 ggacatgtattttgaaacggagggagta 131  Q
     |||| ||||  ||||||||||||||||    
T  39562135 cgacaagtatcatgaaacggagggagta 39562162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 18078186 - 18078104
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggt 83  Q
    |||| ||||||||| | ||| |||||||||||||  |||| | |  ||||||||||||||||||||||||||| ||| |||||    
T  18078186 tgaattaataaatggtcaagagtattatagaaaatccacaaaaaaattcatcaaaaataacaaaatttatttgattttttggt 18078104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 12969778 - 12969737
Alignment:
Q  93 ttctccaaaatggacatgtattttgaaacggagggagtaata 134  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  12969778 ttctccaaaatggacaagtattatgaaacggagggagtaata 12969737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 1002877 - 1002997
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||| ||| | |||| | ||||| ||| |   | ||||||||||||||| |||||||||||| |||||| ||  ||| ||| ||  |||    
T  1002877 tgaaataataaatgagtaatgttattgtcgaaaaaacaaaaggaatttcatcaaaaataataaaatttatttgatttcttagtatgtgtaatatcctcaa 1002976  T
Q  101 aatggacatgtattttgaaac 121  Q
    ||  |||||||||||||||||    
T  1002977 aagcgacatgtattttgaaac 1002997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 32840319 - 32840401
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaa---acacacacatattttcatcaaaaataacaaaatttatttggtttctt 80  Q
    |||||||||||||   ||| |||||||||||||   | | ||||| | |||||||||||||||||||||||||||| ||||||    
T  32840319 tgaaataataaatcgataatggtattatagaaagaaaaaaacacagaatttcatcaaaaataacaaaatttatttgatttctt 32840401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 11841621 - 11841586
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaatattta 138  Q
    |||||||||||||||||||||||||||||| |||||    
T  11841621 tggacatgtattttgaaacggagggagtaacattta 11841586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 137
Target Start/End: Original strand, 5405230 - 5405264
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaatattt 137  Q
    ||||||||||||||||||||||||||||| |||||    
T  5405230 tggacatgtattttgaaacggagggagtattattt 5405264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 131
Target Start/End: Complemental strand, 40756949 - 40756911
Alignment:
Q  93 ttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  40756949 ttctccaaaatggacaagtattatgaaacggagggagta 40756911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Original strand, 44365391 - 44365420
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaa 132  Q
    ||||||||||||||||||||||||||||||    
T  44365391 tggacatgtattttgaaacggagggagtaa 44365420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 2183191 - 2183219
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  2183191 tggacatgtattttgaaacggagggagta 2183219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 7608283 - 7608311
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  7608283 tggacatgtattttgaaacggagggagta 7608311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 8042050 - 8042014
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaatatttat 139  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  8042050 tggacatatattttgaaacggagggagtagtatttat 8042014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 8042256 - 8042284
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  8042256 tggacatgtattttgaaacggagggagta 8042284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 13125173 - 13125141
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaatat 135  Q
    |||||||||||||||||||||| ||||||||||    
T  13125173 tggacatgtattttgaaacggatggagtaatat 13125141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 19141094 - 19141066
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  19141094 tggacatgtattttgaaacggagggagta 19141066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Original strand, 19141300 - 19141328
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  19141300 tggacatgtattttgaaacggagggagta 19141328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 39358174 - 39358146
Alignment:
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    |||||||||||||||||||||||||||||    
T  39358174 tggacatgtattttgaaacggagggagta 39358146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 135
Target Start/End: Original strand, 39358401 - 39358433
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaatat 135  Q
    |||||||||||||||||| ||||||||||||||    
T  39358401 tggacatgtattttgaaatggagggagtaatat 39358433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 109; Significance: 9e-55; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 45582 - 45454
Alignment:
Q  3 aaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaaaa 102  Q
    |||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45582 aaataataaatggttaagggtattatagaaaatacacacataatttcatcaaaaataacaaaatttatttggtttcttggttggtgcaatttctccaaaa 45483  T
Q  103 tggacatgtattttgaaacggagggagta 131  Q
    || ||||||||||||||||||||||||||    
T  45482 tgaacatgtattttgaaacggagggagta 45454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 45692 - 45733
Alignment:
Q  93 ttctccaaaatggacatgtattttgaaacggagggagtaata 134  Q
    ||||| |||||||||| ||||| |||||||||||||||||||    
T  45692 ttctctaaaatggacaagtattatgaaacggagggagtaata 45733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1770 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold1770
Description:

Target: scaffold1770; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 292 - 168
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||| ||||||||||||||    
T  292 tgaaataataaatggttaagggtattatagaaaacacacacatattttcataaaaaataacaaaatttattt--------ggttactgcaatttctccaa 201  T
Q  101 aatggacatgtattttgaaacggagggagtaat 133  Q
    | |||| ||||||||||||||||||||||||||    
T  200 agtggatatgtattttgaaacggagggagtaat 168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 412 - 525
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttggttagtgcaatttctccaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||  || ||| |||||||||||||||||||||||| ||| ||| ||| ||||||||| ||||    
T  412 tgaaataataaatgattaagggtattataaaaaacacaca--taattttatcaaaaataacaaaatttatttgattttttgattactgcaatttcgccaa 509  T
Q  101 aatggacatgtatttt 116  Q
    |||| |||||||||||    
T  510 aatgaacatgtatttt 525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 70954 - 70874
Alignment:
Q  1 tgaaataataaatgattaagggtattatagaaaacacacacatattttcatcaaaaataacaaaatttatttggtttcttg 81  Q
    |||||||||||||| |||||||| ||| |||||| ||||||| | |||||||||||||||||||||||||||| |||||||    
T  70954 tgaaataataaatggttaagggtgttacagaaaaaacacacagaatttcatcaaaaataacaaaatttatttgatttcttg 70874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 23520 - 23467
Alignment:
Q  78 cttggttagtgcaatttctccaaaatggacatgtattttgaaacggagggagta 131  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23520 cttggttactgcaatttctccaaaatggacatgtattttgaaacggagggagta 23467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 23872 - 23916
Alignment:
Q  90 aatttctccaaaatggacatgtattttgaaacggagggagtaata 134  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  23872 aatttctctaaaatggacatgtattttgaaacggatggagtaata 23916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 65310 - 65375
Alignment:
Q  1 tgaaataataaatgattaagggtattatag-aaaacacacacatattttcatcaaaaataacaaaa 65  Q
    |||||||||||||| ||||||||||||||| |||| ||||| ||| ||||||||||||||| ||||    
T  65310 tgaaataataaatggttaagggtattatagaaaaaaacacatataatttcatcaaaaataataaaa 65375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 133
Target Start/End: Complemental strand, 100675 - 100645
Alignment:
Q  103 tggacatgtattttgaaacggagggagtaat 133  Q
    |||||||||||||||||||||||||||||||    
T  100675 tggacatgtattttgaaacggagggagtaat 100645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 67796 - 67764
Alignment:
Q  105 gacatgtattttgaaacggagggagtaatattt 137  Q
    |||||||||||||||||||| ||||||||||||    
T  67796 gacatgtattttgaaacggatggagtaatattt 67764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University