View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17814_low_14 (Length: 460)

Name: NF17814_low_14
Description: NF17814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17814_low_14
NF17814_low_14
[»] chr1 (77 HSPs)
chr1 (17-450)||(44652890-44653320)
chr1 (336-450)||(33231799-33231914)
chr1 (334-450)||(29140683-29140800)
chr1 (335-455)||(30336017-30336138)
chr1 (336-450)||(5085118-5085233)
chr1 (336-445)||(16582492-16582602)
chr1 (339-450)||(48721897-48722010)
chr1 (372-450)||(44335285-44335363)
chr1 (338-450)||(32047403-32047516)
chr1 (370-450)||(50692403-50692483)
chr1 (372-450)||(38680471-38680549)
chr1 (335-450)||(3143361-3143477)
chr1 (370-450)||(44395529-44395609)
chr1 (336-450)||(8877731-8877846)
chr1 (336-450)||(34696912-34697027)
chr1 (372-450)||(13723507-13723585)
chr1 (372-450)||(15512810-15512888)
chr1 (372-450)||(28948993-28949071)
chr1 (372-450)||(30898592-30898670)
chr1 (372-444)||(32152154-32152226)
chr1 (372-443)||(23982628-23982699)
chr1 (367-442)||(31808009-31808084)
chr1 (372-442)||(4813499-4813569)
chr1 (336-449)||(9675697-9675811)
chr1 (372-450)||(15179406-15179484)
chr1 (376-442)||(28723690-28723756)
chr1 (372-450)||(31305314-31305392)
chr1 (336-444)||(5322058-5322167)
chr1 (376-441)||(15911590-15911655)
chr1 (351-450)||(25269351-25269451)
chr1 (367-450)||(47643533-47643614)
chr1 (375-450)||(41737124-41737199)
chr1 (372-450)||(2342900-2342978)
chr1 (372-450)||(27531095-27531173)
chr1 (372-429)||(28334265-28334322)
chr1 (372-449)||(46495305-46495382)
chr1 (379-442)||(16395585-16395648)
chr1 (379-450)||(51996958-51997029)
chr1 (372-450)||(8984690-8984768)
chr1 (372-450)||(25258326-25258404)
chr1 (372-450)||(32144307-32144385)
chr1 (372-450)||(44163228-44163306)
chr1 (372-450)||(47754671-47754749)
chr1 (345-449)||(36084938-36085043)
chr1 (373-450)||(40261592-40261669)
chr1 (335-450)||(35001299-35001415)
chr1 (374-445)||(13352832-13352903)
chr1 (384-455)||(46591110-46591181)
chr1 (399-450)||(47070990-47071041)
chr1 (372-450)||(20564771-20564849)
chr1 (372-442)||(24414996-24415066)
chr1 (372-450)||(35366013-35366091)
chr1 (372-449)||(9684748-9684825)
chr1 (336-416)||(10160678-10160759)
chr1 (351-434)||(29302494-29302578)
chr1 (372-450)||(3831045-3831121)
chr1 (372-450)||(4817935-4818011)
chr1 (372-450)||(4829735-4829811)
chr1 (372-442)||(10842325-10842393)
chr1 (372-450)||(6282470-6282548)
chr1 (372-442)||(34102332-34102402)
chr1 (375-445)||(43189102-43189174)
chr1 (372-442)||(52141212-52141284)
chr1 (380-436)||(13698592-13698648)
chr1 (372-444)||(28679856-28679927)
chr1 (372-450)||(3143765-3143841)
chr1 (407-450)||(25063241-25063284)
chr1 (372-450)||(47133468-47133547)
chr1 (397-450)||(13145439-13145492)
chr1 (393-450)||(34012074-34012131)
chr1 (384-444)||(3072147-3072207)
chr1 (336-414)||(12845051-12845130)
chr1 (372-431)||(23393560-23393619)
chr1 (404-450)||(40205614-40205660)
chr1 (372-450)||(51390566-51390642)
chr1 (410-450)||(291664-291704)
chr1 (372-440)||(37733932-37734000)
[»] chr5 (53 HSPs)
chr5 (333-442)||(34877623-34877733)
chr5 (335-450)||(25017703-25017819)
chr5 (336-442)||(15967149-15967257)
chr5 (335-450)||(21574909-21575025)
chr5 (334-442)||(10933964-10934073)
chr5 (335-450)||(36177251-36177367)
chr5 (367-450)||(15898492-15898575)
chr5 (372-450)||(27587835-27587913)
chr5 (333-450)||(3247303-3247421)
chr5 (372-450)||(3559056-3559134)
chr5 (372-450)||(39690515-39690593)
chr5 (336-450)||(4738590-4738705)
chr5 (336-442)||(27798116-27798223)
chr5 (372-450)||(27642499-27642577)
chr5 (372-450)||(29866186-29866264)
chr5 (372-444)||(10523309-10523381)
chr5 (336-450)||(5845136-5845251)
chr5 (372-450)||(20946084-20946162)
chr5 (372-450)||(30348106-30348184)
chr5 (372-450)||(38972156-38972233)
chr5 (372-438)||(43060551-43060617)
chr5 (372-450)||(21912117-21912195)
chr5 (372-450)||(32067825-32067903)
chr5 (372-442)||(35569042-35569112)
chr5 (397-449)||(129632-129684)
chr5 (372-436)||(11980713-11980777)
chr5 (379-450)||(600769-600840)
chr5 (372-439)||(7510603-7510670)
chr5 (372-435)||(18729585-18729648)
chr5 (374-433)||(25690735-25690794)
chr5 (372-443)||(36347637-36347708)
chr5 (341-450)||(3631149-3631257)
chr5 (376-450)||(31642498-31642571)
chr5 (372-449)||(33862845-33862923)
chr5 (372-450)||(4857523-4857605)
chr5 (393-450)||(12895238-12895295)
chr5 (372-450)||(4745123-4745202)
chr5 (371-450)||(16496433-16496511)
chr5 (399-450)||(29874202-29874253)
chr5 (371-450)||(41521184-41521263)
chr5 (372-450)||(16144-16222)
chr5 (372-449)||(33583810-33583887)
chr5 (351-450)||(9946387-9946487)
chr5 (372-444)||(32402092-32402164)
chr5 (351-450)||(40979241-40979341)
chr5 (372-442)||(14044535-14044605)
chr5 (372-440)||(16969371-16969439)
chr5 (372-416)||(20976353-20976397)
chr5 (401-449)||(24781298-24781346)
chr5 (372-442)||(10656589-10656657)
chr5 (412-449)||(5151230-5151267)
chr5 (379-440)||(43453986-43454047)
chr5 (335-394)||(27925336-27925396)
[»] chr2 (65 HSPs)
chr2 (336-442)||(9718210-9718317)
chr2 (335-450)||(41665670-41665785)
chr2 (336-450)||(8065102-8065217)
chr2 (336-450)||(44424555-44424670)
chr2 (334-432)||(13534373-13534471)
chr2 (336-450)||(15851491-15851606)
chr2 (372-450)||(17663621-17663699)
chr2 (372-450)||(28264981-28265059)
chr2 (372-450)||(45214722-45214800)
chr2 (372-450)||(4398554-4398631)
chr2 (372-450)||(11459150-11459228)
chr2 (380-450)||(14420682-14420752)
chr2 (372-450)||(20361980-20362058)
chr2 (372-450)||(37355033-37355111)
chr2 (372-448)||(3645320-3645396)
chr2 (343-450)||(31644472-31644580)
chr2 (372-448)||(41865713-41865789)
chr2 (336-450)||(17250991-17251106)
chr2 (372-443)||(27749509-27749580)
chr2 (372-450)||(247657-247735)
chr2 (372-450)||(21012850-21012928)
chr2 (372-450)||(24774862-24774940)
chr2 (372-450)||(27297574-27297652)
chr2 (372-450)||(44274697-44274775)
chr2 (372-450)||(44421446-44421524)
chr2 (372-445)||(35178828-35178901)
chr2 (372-442)||(2131754-2131824)
chr2 (372-450)||(8384002-8384080)
chr2 (383-453)||(11071676-11071746)
chr2 (372-450)||(26512068-26512146)
chr2 (372-450)||(34329999-34330077)
chr2 (372-442)||(35241746-35241816)
chr2 (372-450)||(43650031-43650109)
chr2 (374-450)||(45150766-45150842)
chr2 (372-450)||(43709915-43709994)
chr2 (372-450)||(1246443-1246521)
chr2 (372-450)||(3237718-3237798)
chr2 (372-445)||(40346116-40346189)
chr2 (339-450)||(3326687-3326799)
chr2 (336-450)||(28733785-28733898)
chr2 (379-450)||(4033585-4033656)
chr2 (395-450)||(7255621-7255676)
chr2 (372-431)||(42250925-42250984)
chr2 (400-450)||(375375-375425)
chr2 (372-422)||(2395799-2395849)
chr2 (372-449)||(13477064-13477141)
chr2 (402-442)||(14527650-14527690)
chr2 (397-449)||(23464705-23464757)
chr2 (376-423)||(2917154-2917201)
chr2 (403-450)||(4758054-4758101)
chr2 (372-450)||(8667635-8667714)
chr2 (372-450)||(28190595-28190673)
chr2 (399-450)||(35453763-35453814)
chr2 (372-430)||(2048878-2048936)
chr2 (372-450)||(7278643-7278721)
chr2 (372-442)||(38449752-38449822)
chr2 (372-449)||(6597853-6597930)
chr2 (372-440)||(920696-920764)
chr2 (384-436)||(20426950-20427002)
chr2 (372-440)||(34042096-34042164)
chr2 (372-450)||(3337683-3337761)
chr2 (376-450)||(32677476-32677550)
chr2 (372-442)||(38982109-38982187)
chr2 (372-413)||(41327821-41327862)
chr2 (394-430)||(6275617-6275653)
[»] chr8 (62 HSPs)
chr8 (334-450)||(25198248-25198364)
chr8 (335-450)||(41086935-41087049)
chr8 (372-450)||(26878759-26878837)
chr8 (335-450)||(37956081-37956196)
chr8 (372-450)||(14577683-14577761)
chr8 (333-450)||(25184987-25185105)
chr8 (335-450)||(24512198-24512314)
chr8 (336-450)||(38770218-38770333)
chr8 (336-450)||(40337222-40337337)
chr8 (372-450)||(24962396-24962474)
chr8 (372-449)||(57220-57297)
chr8 (334-449)||(7772470-7772586)
chr8 (336-435)||(39543709-39543809)
chr8 (332-450)||(16644067-16644186)
chr8 (372-450)||(2562761-2562839)
chr8 (372-450)||(31746436-31746514)
chr8 (372-444)||(14522641-14522713)
chr8 (335-450)||(16002754-16002870)
chr8 (336-450)||(38773379-38773495)
chr8 (336-450)||(38203023-38203138)
chr8 (372-450)||(12998724-12998802)
chr8 (372-446)||(22590372-22590446)
chr8 (372-450)||(37141723-37141801)
chr8 (372-450)||(40790786-40790863)
chr8 (372-442)||(43980622-43980692)
chr8 (367-450)||(36437492-36437576)
chr8 (372-450)||(40517740-40517815)
chr8 (372-450)||(24276588-24276664)
chr8 (372-450)||(885459-885536)
chr8 (372-450)||(3113564-3113642)
chr8 (372-446)||(5191584-5191657)
chr8 (372-450)||(7172216-7172294)
chr8 (372-450)||(14846952-14847030)
chr8 (372-450)||(25888592-25888670)
chr8 (372-450)||(31673594-31673671)
chr8 (372-450)||(38761389-38761467)
chr8 (372-450)||(45185298-45185376)
chr8 (372-450)||(45203756-45203833)
chr8 (334-434)||(4273955-4274056)
chr8 (365-441)||(31252695-31252770)
chr8 (379-450)||(14739433-14739504)
chr8 (372-450)||(17933701-17933780)
chr8 (371-450)||(36309627-36309704)
chr8 (367-450)||(44255445-44255528)
chr8 (404-450)||(12762871-12762917)
chr8 (372-450)||(14906598-14906676)
chr8 (384-450)||(30262569-30262635)
chr8 (372-442)||(34882667-34882737)
chr8 (377-450)||(45183892-45183965)
chr8 (374-442)||(3006820-3006888)
chr8 (333-450)||(10396261-10396377)
chr8 (372-450)||(1769478-1769556)
chr8 (372-442)||(37600927-37600997)
chr8 (372-445)||(1177192-1177264)
chr8 (376-449)||(41541550-41541623)
chr8 (372-436)||(45283827-45283891)
chr8 (406-444)||(27194061-27194099)
chr8 (372-450)||(40602072-40602150)
chr8 (372-450)||(43191508-43191586)
chr8 (397-445)||(35709135-35709183)
chr8 (409-450)||(34157951-34157992)
chr8 (410-450)||(35794777-35794817)
[»] chr3 (67 HSPs)
chr3 (336-450)||(30476000-30476115)
chr3 (351-450)||(40645648-40645748)
chr3 (351-449)||(41727271-41727370)
chr3 (333-450)||(43187125-43187243)
chr3 (372-450)||(46435762-46435840)
chr3 (335-445)||(29676776-29676887)
chr3 (333-450)||(27638109-27638227)
chr3 (372-449)||(26517248-26517325)
chr3 (335-439)||(41308819-41308924)
chr3 (336-450)||(46048480-46048596)
chr3 (332-450)||(12077775-12077894)
chr3 (372-444)||(14645927-14645999)
chr3 (367-442)||(41825177-41825252)
chr3 (372-450)||(20945332-20945410)
chr3 (372-450)||(26121328-26121406)
chr3 (372-450)||(31531457-31531535)
chr3 (372-444)||(11388117-11388189)
chr3 (367-450)||(27047210-27047293)
chr3 (372-442)||(13084398-13084468)
chr3 (372-450)||(26043015-26043093)
chr3 (372-450)||(31819402-31819480)
chr3 (372-450)||(42891415-42891493)
chr3 (372-450)||(52325535-52325613)
chr3 (336-450)||(26998853-26998969)
chr3 (335-449)||(50092626-50092741)
chr3 (372-442)||(11344554-11344624)
chr3 (372-450)||(25750523-25750601)
chr3 (372-450)||(29645354-29645432)
chr3 (372-450)||(33287862-33287940)
chr3 (372-442)||(42010864-42010934)
chr3 (372-450)||(50525008-50525086)
chr3 (372-445)||(11393918-11393991)
chr3 (376-448)||(35765680-35765752)
chr3 (387-442)||(29611845-29611900)
chr3 (387-450)||(39617282-39617345)
chr3 (372-455)||(44338078-44338160)
chr3 (372-450)||(831392-831470)
chr3 (372-442)||(22659576-22659646)
chr3 (372-450)||(50363023-50363101)
chr3 (372-450)||(51263078-51263156)
chr3 (372-445)||(41543644-41543717)
chr3 (386-450)||(28477395-28477459)
chr3 (384-444)||(33412011-33412071)
chr3 (334-412)||(5504612-5504691)
chr3 (374-433)||(23157093-23157152)
chr3 (406-453)||(35055816-35055863)
chr3 (372-435)||(37729076-37729139)
chr3 (372-450)||(11140701-11140779)
chr3 (404-450)||(41740005-41740051)
chr3 (372-430)||(53717578-53717636)
chr3 (372-450)||(54425988-54426066)
chr3 (405-450)||(21932955-21933000)
chr3 (372-445)||(34055899-34055972)
chr3 (374-450)||(48309443-48309518)
chr3 (374-450)||(48901549-48901625)
chr3 (374-450)||(48903115-48903191)
chr3 (372-442)||(44083622-44083693)
chr3 (372-442)||(54555964-54556034)
chr3 (372-445)||(21864295-21864367)
chr3 (372-445)||(31650702-31650775)
chr3 (402-450)||(28243785-28243833)
chr3 (372-450)||(26243468-26243546)
chr3 (372-416)||(35145236-35145280)
chr3 (374-429)||(23068032-23068086)
chr3 (404-437)||(48213653-48213686)
chr3 (372-449)||(48581314-48581391)
chr3 (372-425)||(49000448-49000501)
[»] chr7 (51 HSPs)
chr7 (333-450)||(36116278-36116396)
chr7 (336-450)||(1324668-1324783)
chr7 (332-442)||(4089538-4089649)
chr7 (335-450)||(36726203-36726319)
chr7 (336-450)||(48767524-48767639)
chr7 (372-450)||(20123447-20123525)
chr7 (335-450)||(49100630-49100746)
chr7 (372-450)||(2276607-2276685)
chr7 (372-450)||(21388239-21388317)
chr7 (372-450)||(25750365-25750443)
chr7 (372-450)||(37048032-37048110)
chr7 (372-450)||(37673734-37673812)
chr7 (372-450)||(48193612-48193690)
chr7 (336-450)||(10685044-10685160)
chr7 (339-450)||(43465173-43465286)
chr7 (372-450)||(21809677-21809755)
chr7 (372-450)||(27213484-27213562)
chr7 (372-450)||(31373728-31373806)
chr7 (372-450)||(37491649-37491727)
chr7 (372-442)||(40740947-40741017)
chr7 (372-445)||(21801091-21801164)
chr7 (335-450)||(48610166-48610282)
chr7 (376-443)||(29636077-29636144)
chr7 (372-450)||(6376163-6376241)
chr7 (372-450)||(18122072-18122150)
chr7 (372-450)||(46783871-46783949)
chr7 (372-450)||(35128383-35128459)
chr7 (372-450)||(19236097-19236175)
chr7 (372-450)||(33181292-33181370)
chr7 (372-450)||(40263708-40263786)
chr7 (372-431)||(10595146-10595205)
chr7 (379-442)||(29992979-29993042)
chr7 (372-450)||(23876034-23876112)
chr7 (372-442)||(26632843-26632913)
chr7 (372-442)||(28663753-28663822)
chr7 (372-445)||(40211312-40211385)
chr7 (372-450)||(27162934-27163010)
chr7 (376-442)||(21752529-21752595)
chr7 (372-442)||(26201006-26201076)
chr7 (385-450)||(41672597-41672662)
chr7 (394-442)||(21392931-21392979)
chr7 (372-444)||(27170009-27170080)
chr7 (372-442)||(20124185-20124255)
chr7 (372-442)||(42993226-42993296)
chr7 (384-440)||(5334435-5334491)
chr7 (384-444)||(19477452-19477512)
chr7 (374-450)||(43601195-43601270)
chr7 (336-441)||(29723421-29723527)
chr7 (377-436)||(36195393-36195452)
chr7 (384-442)||(25828130-25828188)
chr7 (336-416)||(25098972-25099053)
[»] chr4 (70 HSPs)
chr4 (336-444)||(20262430-20262539)
chr4 (336-450)||(5448622-5448737)
chr4 (336-442)||(16070391-16070498)
chr4 (335-447)||(46729265-46729377)
chr4 (336-450)||(25477185-25477300)
chr4 (372-450)||(50782775-50782853)
chr4 (372-449)||(30153253-30153330)
chr4 (374-450)||(34543701-34543777)
chr4 (336-450)||(52225979-52226094)
chr4 (372-450)||(12624693-12624771)
chr4 (372-450)||(14602685-14602763)
chr4 (372-450)||(29584891-29584969)
chr4 (372-450)||(31486485-31486563)
chr4 (372-450)||(37175052-37175129)
chr4 (372-450)||(38136352-38136430)
chr4 (372-450)||(39237619-39237697)
chr4 (336-441)||(51787731-51787837)
chr4 (346-449)||(48472526-48472631)
chr4 (336-450)||(22750872-22750987)
chr4 (372-450)||(3094179-3094257)
chr4 (372-442)||(37625163-37625233)
chr4 (372-450)||(41920068-41920146)
chr4 (372-450)||(56373374-56373452)
chr4 (372-455)||(13096567-13096649)
chr4 (372-450)||(5932884-5932961)
chr4 (372-442)||(28116543-28116613)
chr4 (376-450)||(33246527-33246601)
chr4 (372-442)||(52198766-52198836)
chr4 (372-453)||(24072764-24072845)
chr4 (340-442)||(32236795-32236898)
chr4 (336-450)||(52552541-52552656)
chr4 (372-442)||(5536494-5536564)
chr4 (372-442)||(19654425-19654495)
chr4 (372-442)||(20291337-20291407)
chr4 (372-450)||(22651461-22651539)
chr4 (372-450)||(43509080-43509156)
chr4 (336-450)||(43800758-43800883)
chr4 (372-449)||(54438507-54438584)
chr4 (373-444)||(5416905-5416974)
chr4 (372-435)||(3684233-3684296)
chr4 (372-450)||(10602236-10602315)
chr4 (372-443)||(20185693-20185764)
chr4 (372-450)||(41945803-41945880)
chr4 (372-449)||(45628105-45628183)
chr4 (372-450)||(20016522-20016598)
chr4 (377-436)||(20791929-20791988)
chr4 (372-450)||(31840095-31840171)
chr4 (387-450)||(31937422-31937485)
chr4 (372-450)||(10541287-10541365)
chr4 (372-442)||(39414233-39414303)
chr4 (372-442)||(45079849-45079919)
chr4 (376-445)||(26203131-26203200)
chr4 (370-450)||(39197064-39197145)
chr4 (372-450)||(7002179-7002258)
chr4 (379-450)||(18683563-18683634)
chr4 (381-432)||(54359690-54359741)
chr4 (372-410)||(20293740-20293778)
chr4 (404-442)||(51918690-51918728)
chr4 (372-425)||(30049428-30049481)
chr4 (335-409)||(40411676-40411752)
chr4 (372-429)||(54701338-54701395)
chr4 (372-416)||(50438901-50438945)
chr4 (372-450)||(20116449-20116525)
chr4 (384-443)||(42169222-42169281)
chr4 (400-450)||(5168004-5168054)
chr4 (372-450)||(26186785-26186863)
chr4 (375-413)||(32866504-32866542)
chr4 (407-445)||(52768934-52768972)
chr4 (399-444)||(23928356-23928401)
chr4 (364-407)||(3113362-3113406)
[»] chr6 (34 HSPs)
chr6 (336-449)||(5895691-5895805)
chr6 (372-450)||(1763810-1763888)
chr6 (372-450)||(31945943-31946021)
chr6 (336-449)||(4250690-4250804)
chr6 (372-450)||(16327120-16327198)
chr6 (372-450)||(19838928-19839006)
chr6 (372-445)||(15981791-15981864)
chr6 (372-450)||(3729386-3729464)
chr6 (372-450)||(11302852-11302930)
chr6 (372-450)||(16350518-16350596)
chr6 (372-445)||(22410879-22410952)
chr6 (335-442)||(9461253-9461360)
chr6 (336-450)||(5084568-5084687)
chr6 (372-450)||(12514616-12514694)
chr6 (372-445)||(3887979-3888051)
chr6 (373-438)||(28238357-28238422)
chr6 (374-443)||(30248563-30248631)
chr6 (394-450)||(10669305-10669361)
chr6 (372-450)||(11081893-11081971)
chr6 (372-442)||(30466007-30466077)
chr6 (374-450)||(197482-197558)
chr6 (372-450)||(6791375-6791451)
chr6 (379-442)||(20522976-20523039)
chr6 (372-442)||(9428164-9428234)
chr6 (333-446)||(16186530-16186643)
chr6 (372-442)||(31536009-31536079)
chr6 (372-450)||(31780121-31780199)
chr6 (372-450)||(34513249-34513327)
chr6 (372-442)||(1514267-1514336)
chr6 (404-450)||(33607384-33607430)
chr6 (336-416)||(3307974-3308055)
chr6 (376-435)||(31487407-31487466)
chr6 (404-442)||(12514794-12514832)
chr6 (372-416)||(27441775-27441819)
[»] scaffold1091 (1 HSPs)
scaffold1091 (372-450)||(1943-2021)
[»] scaffold0005 (1 HSPs)
scaffold0005 (372-450)||(214615-214693)
[»] scaffold0038 (1 HSPs)
scaffold0038 (373-438)||(38519-38584)
[»] scaffold0182 (2 HSPs)
scaffold0182 (336-450)||(22025-22135)
scaffold0182 (381-455)||(18695-18769)
[»] scaffold0176 (1 HSPs)
scaffold0176 (372-450)||(19529-19605)
[»] scaffold0012 (1 HSPs)
scaffold0012 (372-450)||(99847-99925)
[»] scaffold0121 (1 HSPs)
scaffold0121 (336-392)||(24095-24152)
[»] scaffold0013 (2 HSPs)
scaffold0013 (372-450)||(49133-49211)
scaffold0013 (401-449)||(61313-61361)
[»] scaffold0699 (1 HSPs)
scaffold0699 (374-450)||(7577-7652)
[»] scaffold0166 (1 HSPs)
scaffold0166 (401-449)||(23681-23729)


Alignment Details
Target: chr1 (Bit Score: 321; Significance: 0; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 17 - 450
Target Start/End: Complemental strand, 44653320 - 44652890
Alignment:
Q  17 actattaaattcttgccatttgttgcaaggatctttattttagtccctttggttgtgttattctttaggttctatatgtggttgctttgtagtgttggat 116  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||    
T  44653320 actattaaactcttgccatttgttgcaaggatctttattttagtccctttggttgtgttattctttaggtgctatatgtggttgctttgtggtcttggat 44653221  T
Q  117 tggttattgttagtaggaaaacaattcatgctcaaactagaaattagtgggttttgttcaaacaaacaaaataatataatgagtggttaatttacctcat 216  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||| ||||||||| |||||||| ||||||||||||||| ||||| |||||||| |||||    
T  44653220 tggttattgttagtacgaaaacgattgatgctcaaactagaaatcagtgggttt-gttcaaaccaacaaaataatataacgagtgtttaatttatctcat 44653122  T
Q  217 caaaccgaattttaagtttgactaaacacaatccaaaccgatccacgtacacactaggttagagttttatcaaaaattgagtcttttttcccttacaaat 316  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||    
T  44653121 caaaccgaattttaagtttgactaaacactattcaaaccgatccacgtacatcttaggttagagttttatcaaaaattgagtcttttttcccttacaaat 44653022  T
Q  317 tgggtcgttgcttgcaatatactccctccgtcctttaatgtagccattcattgcc-ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtc 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||    
T  44653021 tgggtcgttgcttgcaatatactccctccgtcctttaatgtagccattcattgccattttcacatttcttaagaaatgtt---agtgtaattaatgtgtc 44652925  T
Q  416 tattttgtgtgttaatattaccaaattgtcctttg 450  Q
    | |||||||| |||||||||||| ||||| |||||    
T  44652924 tgttttgtgttttaatattaccacattgttctttg 44652890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 33231799 - 33231914
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||||||| ||||||||||||| ||||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||    
T  33231799 tactccctccgtcccttaatgtagccatccattgcctttttcacatttcttaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatatt 33231898  T
Q  435 accaaattgtcctttg 450  Q
    || |||||||||||||    
T  33231899 acgaaattgtcctttg 33231914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 334 - 450
Target Start/End: Complemental strand, 29140800 - 29140683
Alignment:
Q  334 tatactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaata 432  Q
    |||||||||||||||||||||||||| |||  |||||||||| |||||||||||||||| |||| | ||||||||||||||||| |||||||| ||||||    
T  29140800 tatactccctccgtcctttaatgtagtcatctattgcctttttcacatttcttaagaaaagttgccggtgtaattaatgtgtctgttttgtgtattaata 29140701  T
Q  433 ttaccaaattgtcctttg 450  Q
    |||| |||||||||||||    
T  29140700 ttacaaaattgtcctttg 29140683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 335 - 455
Target Start/End: Original strand, 30336017 - 30336138
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    |||||||||  ||||  |||||||| || ||||||| |||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  30336017 atactcccttggtcccataatgtagacactcattgcttttttcacatttcttaagaaaagttgtcggtgtaattaatgtgtctattttgtgtgttaatat 30336116  T
Q  434 taccaaattgtcctttgcttct 455  Q
    ||||||||||||||||| ||||    
T  30336117 taccaaattgtcctttgtttct 30336138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 336 - 450
Target Start/End: Complemental strand, 5085233 - 5085118
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||||||| ||||||||| ||  ||||||||||| ||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  5085233 tactccctccgtcccttaatgtaggcacccattgcctttttcacattttttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatatt 5085134  T
Q  435 accaaattgtcctttg 450  Q
    || |||||||| ||||    
T  5085133 acgaaattgtcttttg 5085118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 336 - 445
Target Start/End: Original strand, 16582492 - 16582602
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    ||||||||| || | ||||||||||||| ||||| ||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  16582492 tactccctctgttccttaatgtagccatccattgtctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatatt 16582591  T
Q  435 accaaattgtc 445  Q
    || ||||||||    
T  16582592 acgaaattgtc 16582602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 339 - 450
Target Start/End: Complemental strand, 48722010 - 48721897
Alignment:
Q  339 tccctccgtcctttaatgtagccattcattgcctttt--cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattac 436  Q
    ||||||||||| ||||||||| ||  |||||||||||  |||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||    
T  48722010 tccctccgtcccttaatgtaggcacccattgccttttttcacatttcttaagaaaagctgtcagtgtaattaatgtgtctgttttgtgtgttaatattac 48721911  T
Q  437 caaattgtcctttg 450  Q
     |||||||||||||    
T  48721910 gaaattgtcctttg 48721897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 44335285 - 44335363
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44335285 ttttcacatttcttaataaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcctttg 44335363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 338 - 450
Target Start/End: Original strand, 32047403 - 32047516
Alignment:
Q  338 ctccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattac 436  Q
    |||||||||||| ||||||||| ||  |||||| |||| |||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||    
T  32047403 ctccctccgtcccttaatgtaggcacccattgcttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattac 32047502  T
Q  437 caaattgtcctttg 450  Q
     |||||||| ||||    
T  32047503 gaaattgtcatttg 32047516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 370 - 450
Target Start/End: Original strand, 50692403 - 50692483
Alignment:
Q  370 ccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||    
T  50692403 ccttttcacatttcttaagaaaagttgtcaatgcaattaatgtgtctattttgtgtgttagtattaccaaattgtcctttg 50692483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 38680471 - 38680549
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  38680471 ttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattatcaaattgtcatttg 38680549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 335 - 450
Target Start/End: Original strand, 3143361 - 3143477
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    |||||||||| |||| ||||||||| ||  |||||| |||| |||||||||||||||| ||||||| ||||||||||||||||  |||||||||||||||    
T  3143361 atactccctctgtcccttaatgtaggcacccattgcttttttcacatttcttaagaaaagttgtcattgtaattaatgtgtctgctttgtgtgttaatat 3143460  T
Q  434 taccaaattgtcctttg 450  Q
    ||| |||||||| ||||    
T  3143461 tacaaaattgtcttttg 3143477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 370 - 450
Target Start/End: Original strand, 44395529 - 44395609
Alignment:
Q  370 ccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||| ||||| |||||||    
T  44395529 ccttttcacatttcttaagaaatgttgtcagtgtaattaatatgtttattttatgtgttaatattacaaaattatcctttg 44395609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 8877731 - 8877846
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    ||||| |||||||||||||||||| || |||||||||||| || |||| ||||||||  |||||||| |||||||||||| | |||||||||||||||||    
T  8877731 tactctctccgtcctttaatgtagacactcattgcctttttcatattttttaagaaaaattgtcagtataattaatgtgtttgttttgtgtgttaatatt 8877830  T
Q  435 accaaattgtcctttg 450  Q
    || |||||||| ||||    
T  8877831 acgaaattgtcatttg 8877846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 336 - 450
Target Start/End: Complemental strand, 34697027 - 34696912
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||||||| |||||||||  || || || ||||| ||||||| |||||||| |||||||||||||||||| ||||| |||||||||||||||||    
T  34697027 tactccctccgtcccttaatgtagggatccactgtctttttcacattttttaagaaaagttgtcagtgtaattaatatgtctgttttgtgtgttaatatt 34696928  T
Q  435 accaaattgtcctttg 450  Q
    || |||||||| ||||    
T  34696927 acgaaattgtcatttg 34696912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 13723585 - 13723507
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| |||| |||||||||||||||||||||| |||||||||||||||| |||||||    
T  13723585 ttttcacatttcttaagaaaagttgttagtgcaattaatgtgtctattttgtgtattaatattaccaaattatcctttg 13723507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 15512888 - 15512810
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| |||||| |||||||||||||||| |||||||||||||| |||||||||||||    
T  15512888 ttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttg 15512810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 28949071 - 28948993
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| |||||| |||||||||||||||| |||||||||||||| |||||||||||||    
T  28949071 ttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttg 28948993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 30898670 - 30898592
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||    
T  30898670 ttttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctgttttatgtgttaatattaccaaattatcctttg 30898592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 372 - 444
Target Start/End: Original strand, 32152154 - 32152226
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgt 444  Q
    |||||||||||||||||||| |||||  ||| |||||||||||||||||||||||||||||||||||||||||    
T  32152154 ttttcacatttcttaagaaaagttgttggtgcaattaatgtgtctattttgtgtgttaatattaccaaattgt 32152226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 372 - 443
Target Start/End: Complemental strand, 23982699 - 23982628
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattg 443  Q
    |||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  23982699 ttttcacatttcttaagaaaagttgtcaatgtaattaatgtgtctgttttgtgtgttaatattatcaaattg 23982628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 367 - 442
Target Start/End: Complemental strand, 31808084 - 31808009
Alignment:
Q  367 ttgccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||| |||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31808084 ttgcattttcacacttcttgagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 31808009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 4813569 - 4813499
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||||||||||||||||| ||||| | || |||||||||||||||||||||||||||||||||||||||    
T  4813569 ttttcacatttcttaagaaaagttgttaatgcaattaatgtgtctattttgtgtgttaatattaccaaatt 4813499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 336 - 449
Target Start/End: Complemental strand, 9675811 - 9675697
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgccttttc-acatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||| ||||||| ||||||||| ||  ||||| |||||  || |||||||||||| |||||||||||||||||| |||||  ||||||||||||||||    
T  9675811 tactccatccgtcccttaatgtaggcacccattgacttttttacgtttcttaagaaaagttgtcagtgtaattaatttgtctgatttgtgtgttaatatt 9675712  T
Q  435 accaaattgtccttt 449  Q
    || ||||||||||||    
T  9675711 acgaaattgtccttt 9675697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 15179406 - 15179484
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||| || || |||||||| |||||||||||||    
T  15179406 ttttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctattttatgcgtaaatattacaaaattgtcctttg 15179484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 376 - 442
Target Start/End: Complemental strand, 28723756 - 28723690
Alignment:
Q  376 cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28723756 cacattttttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 28723690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 31305314 - 31305392
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| |||||||| |||||  |||||||||||||||||||||||| || |||||||||||||||||||||||    
T  31305314 ttttcacatttattaagaaaagttgttggtgtaattaatgtgtctattttgtatgctaatattaccaaattgtcctttg 31305392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 336 - 444
Target Start/End: Complemental strand, 5322167 - 5322058
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||||||| ||||||||| |||  |||||||||| || |||| |||||||| ||| ||| |||||||||||||||| ||||||||||| |||||    
T  5322167 tactccctccgtcccttaatgtaggcatctattgcctttttcatattttttaagaaaagttatcaatgtaattaatgtgtctgttttgtgtgtttatatt 5322068  T
Q  435 accaaattgt 444  Q
    || |||||||    
T  5322067 acgaaattgt 5322058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 376 - 441
Target Start/End: Complemental strand, 15911655 - 15911590
Alignment:
Q  376 cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaat 441  Q
    |||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  15911655 cacatttcttaagaaaagttgttagtgtacttaatgtgtctattttgtgtgttaatattaccaaat 15911590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 351 - 450
Target Start/End: Original strand, 25269351 - 25269451
Alignment:
Q  351 ttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    ||||||| ||||| ||||| ||||| ||||||| |||||||| ||||||||||||| |||||||||| |||| |||||||||||||| ||||| ||||||    
T  25269351 ttaatgttgccatccattgtctttttcacattttttaagaaaagttgtcagtgtaaataatgtgtctgttttatgtgttaatattacgaaattttccttt 25269450  T
Q  450 g 450  Q
    |    
T  25269451 g 25269451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 367 - 450
Target Start/End: Original strand, 47643533 - 47643614
Alignment:
Q  367 ttgccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||  ||| || |||||||||||||| |||||||||||||    
T  47643533 ttgctttttcacatttcttaagaaaagttgtcagtgtaattaatgtg--tatgttttgtgttaatattactaaattgtcctttg 47643614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 375 - 450
Target Start/End: Original strand, 41737124 - 41737199
Alignment:
Q  375 tcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||| ||||||||||| ||||| |||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  41737124 tcacacttcttaagaaaagttgttagtgtaattaaaatgtctattttgtgtgttaatattaccaaattgtcttttg 41737199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 2342900 - 2342978
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| ||||||||  |||| ||| || |||||||||||||||||||||||||||||||||||||||| ||||    
T  2342900 ttttcacattttttaagaaaaattgttagtttacttaatgtgtctattttgtgtgttaatattaccaaattgtcttttg 2342978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 27531095 - 27531173
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||||||| |||||||||||| | |||||||||||||||||||  |||||| |||||    
T  27531095 ttttcacatttcttaagaaaagttgtcagtataattaatgtgtttgttttgtgtgttaatattacttaattgttctttg 27531173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 372 - 429
Target Start/End: Complemental strand, 28334322 - 28334265
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgtta 429  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  28334322 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgtta 28334265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 372 - 449
Target Start/End: Original strand, 46495305 - 46495382
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    ||||||||||| | || |||  ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  46495305 ttttcacatttttaaaaaaaaattgtcagtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtccttt 46495382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 379 - 442
Target Start/End: Complemental strand, 16395648 - 16395585
Alignment:
Q  379 atttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||| |||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||    
T  16395648 attttttaagaaatgttatcggtgtaattaatgtgtctattttgtatgttaatattaccaaatt 16395585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 379 - 450
Target Start/End: Original strand, 51996958 - 51997029
Alignment:
Q  379 atttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||| |||||||||||||||||| ||| | |||| ||||||||||||||||||| ||||||||    
T  51996958 atttcttaagaaaagttgtcagtgtaattaatttgtatgttttctgtgttaatattaccaaatcgtcctttg 51997029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 8984768 - 8984690
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| ||||| ||  |||| |||||||||||||||||| ||||||||||||||||||| |||||||| ||||    
T  8984768 ttttcacattttttaaggaaaattgttagtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcatttg 8984690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 25258326 - 25258404
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||| |||| |||||||| ||||| |||| |||||||||||||||||| ||| || |||||||||||||||||||||    
T  25258326 ttttcatattttttaagaaaagttgttagtgcaattaatgtgtctattttatgtcttgatattaccaaattgtcctttg 25258404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 32144307 - 32144385
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| ||||||||||||||| |||||  ||| | ||||||||||||||||||| |||||||||||||||||||| ||||    
T  32144307 tttttacatttcttaagaaaagttgttggtgcatttaatgtgtctattttgtgcgttaatattaccaaattgtcatttg 32144385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 44163228 - 44163306
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||| ||| ||| |||||||||||||||||| | ||||||||||||||||||  |||||||| ||||    
T  44163228 ttttcacatttcttaaaaaaagttatcagtgtaattaatgtgtttgttttgtgtgttaatattattaaattgtcatttg 44163306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 47754749 - 47754671
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| ||||||||||| |||  |||| |||| |||||||||||||||||| ||||||||||||||||||||||| ||||    
T  47754749 tttttacatttcttaaaaaaaattgttagtgcaattaatgtgtctattttttgtgttaatattaccaaattgtcatttg 47754671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 449
Target Start/End: Original strand, 36084938 - 36085043
Alignment:
Q  345 cgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattg 443  Q
    ||||| ||||||||| || |||||| ||||| ||||||| ||||||||  || |||||||||||||||| ||| ||||||||||||||||||  |||||     
T  36084938 cgtcccttaatgtaggcaatcattgtctttttcacattttttaagaaaaattatcagtgtaattaatgtatctgttttgtgtgttaatattaagaaatta 36085037  T
Q  444 tccttt 449  Q
    ||||||    
T  36085038 tccttt 36085043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 450
Target Start/End: Original strand, 40261592 - 40261669
Alignment:
Q  373 tttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||| |||| || || |||| ||||||||||| |||||||||||||||||||| ||||||| ||||||    
T  40261592 tttcacatttcttatgaaaagtagttagtgcaattaatgtgtttattttgtgtgttaatattatcaaattgccctttg 40261669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 450
Target Start/End: Complemental strand, 35001415 - 35001299
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    ||||||| ||||||| ||||| ||| ||  ||||| ||||| ||||||| |||||||| |||||||||||||| ||  ||||| |||||||||||||| |    
T  35001415 atactccttccgtcccttaatctaggcacccattgtctttttcacatttattaagaaaagttgtcagtgtaatcaaaatgtctgttttgtgtgttaatgt 35001316  T
Q  434 taccaaattgtcctttg 450  Q
    ||  |||||||||||||    
T  35001315 tatgaaattgtcctttg 35001299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 374 - 445
Target Start/End: Original strand, 13352832 - 13352903
Alignment:
Q  374 ttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtc 445  Q
    ||||||||||||||||||||| || |||  ||||||||||||| |||| ||||||||||||| |||||||||    
T  13352832 ttcacatttcttaagaaatgtagttagttcaattaatgtgtctgttttatgtgttaatattagcaaattgtc 13352903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 384 - 455
Target Start/End: Original strand, 46591110 - 46591181
Alignment:
Q  384 ttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgcttct 455  Q
    |||||||| ||||| |||||||||||||||| | |||||||||||||||||| | |||||||||||| ||||    
T  46591110 ttaagaaaagttgtgagtgtaattaatgtgtttgttttgtgtgttaatattatcgaattgtcctttgtttct 46591181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 399 - 450
Target Start/End: Complemental strand, 47071041 - 47070990
Alignment:
Q  399 agtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  47071041 agtgtaattaatgtgtctattttatgtgttaatattaccaaattgtcatttg 47070990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 20564771 - 20564849
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| |||||||| ||||  ||||||| ||||||||||| ||| |||||||||||||| |||||||| ||||    
T  20564771 ttttcacatttgttaagaaaagttgatagtgtaactaatgtgtctactttatgtgttaatattacaaaattgtcttttg 20564849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 24414996 - 24415066
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||| |||||| ||||| ||| ||||| ||||||||||||| ||| |||||||||||||||||||||||||    
T  24414996 tttttacatttattaagtaatattgtcggtgtaattaatgtatctcttttgtgtgttaatattaccaaatt 24415066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 35366091 - 35366013
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||| ||||||||  ||| ||||| ||||||| |||||| |||||||||||||||||||||| ||||||||| ||||    
T  35366091 ttttcatatttcttactaaaagttgttagtgtaagtaatgtatctattttgtgtgttaatattatcaaattgtcttttg 35366013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 449
Target Start/End: Complemental strand, 9684825 - 9684748
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    ||||||||||| |||| ||| ||| ||  |||||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  9684825 ttttcacattttttaaaaaaagttatcgatgtaattaatgtgtctgttttgtgcgttaatattacaaaattgtccttt 9684748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 416
Target Start/End: Original strand, 10160678 - 10160759
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtct 416  Q
    |||||||||| ||| ||||| ||| ||| | ||||||||| |||||||||||||||| ||| ||||||||||||||||||||    
T  10160678 tactccctccatcccttaatataggcatccgttgcctttttcacatttcttaagaaaagttatcagtgtaattaatgtgtct 10160759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 351 - 434
Target Start/End: Complemental strand, 29302578 - 29302494
Alignment:
Q  351 ttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    ||||||||| ||| |||| |||||| |||||||||||||||| |||||||||||||| ||||| | | |||||| ||||||||||    
T  29302578 ttaatgtaggcatccattccctttttcacatttcttaagaaaagttgtcagtgtaatcaatgtatttgttttgtatgttaatatt 29302494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 3831045 - 3831121
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| |||||||| ||| |||||   |||||||| ||||||||||||||||||||||| |||||||| ||||    
T  3831045 ttttcacattttttaagaaaagttatcagtt--attaatgtatctattttgtgtgttaatattacgaaattgtcatttg 3831121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 4818011 - 4817935
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| |||||| ||||||||| ||||  | |||||||| ||||||||| ||||||||| ||||    
T  4818011 ttttcacatttcttaagaaaagttgtcggtgtaattattgtg--tgttttgtgtattaatattatcaaattgtcttttg 4817935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 4829811 - 4829735
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| |||||| ||||||||| ||||  | |||||||| ||||||||| ||||||||| ||||    
T  4829811 ttttcacatttcttaagaaaagttgtcggtgtaattattgtg--tgttttgtgtattaatattatcaaattgtcttttg 4829735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 10842325 - 10842393
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||||||||||||||||| ||||| | || ||||||| |||||||||  ||||||||||||||||||||    
T  10842325 ttttcacatttcttaagaaaagttgttaatgcaattaatatgtctattt--tgtgttaatattaccaaatt 10842393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 6282470 - 6282548
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||| |||| |||||||  |||| |||  |||||||||||||||||| |||||||||||||  |||||||||||||    
T  6282470 ttttcacgtttcataagaaaaattgttagtacaattaatgtgtctattttatgtgttaatattataaaattgtcctttg 6282548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 34102332 - 34102402
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||| |||| ||||||||  || ||| |||||||||||||||| |||||||||||||||||| ||||||    
T  34102332 ttttcaaattttttaagaaaaattttcattgtaattaatgtgtctgttttgtgtgttaatattatcaaatt 34102402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 375 - 445
Target Start/End: Original strand, 43189102 - 43189174
Alignment:
Q  375 tcacatttcttaagaaatgttgtcagtgtaatta--atgtgtctattttgtgtgttaatattaccaaattgtc 445  Q
    ||||| ||||||||||| ||||| |||| |||||  || |||||||||||| |||||||||||||||||||||    
T  43189102 tcacaattcttaagaaaagttgttagtgcaattataatatgtctattttgtatgttaatattaccaaattgtc 43189174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 52141284 - 52141212
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatg--tgtctattttgtgtgttaatattaccaaatt 442  Q
    ||||||||||| ||||||||  || | |||||||||||||  |||||||||||||||||||||||| ||||||    
T  52141284 ttttcacattttttaagaaaaattattagtgtaattaatgcgtgtctattttgtgtgttaatattatcaaatt 52141212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 436
Target Start/End: Original strand, 13698592 - 13698648
Alignment:
Q  380 tttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattac 436  Q
    |||||||||||| ||||| |||||||||||| ||| ||||||| |||||||||||||    
T  13698592 tttcttaagaaaagttgttagtgtaattaatatgtttattttgcgtgttaatattac 13698648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 444
Target Start/End: Complemental strand, 28679927 - 28679856
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgt 444  Q
    ||||||||||| |||| ||| ||||| | || ||||||||||||||||||||||||||||||||  |||||||    
T  28679927 ttttcacattt-ttaaaaaaagttgttaatgcaattaatgtgtctattttgtgtgttaatattattaaattgt 28679856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 3143841 - 3143765
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||| || |||||||||| ||||  |||||||||||||||||||||||  |||||| ||||| ||||||||| ||||    
T  3143841 ttttcatatgtcttaagaaaagttgatagtgtaattaatgtgtctatttt--gtgttattattatcaaattgtcttttg 3143765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 407 - 450
Target Start/End: Original strand, 25063241 - 25063284
Alignment:
Q  407 taatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||| |||||||||||||||||||| ||||||||||||    
T  25063241 taatgtgtctgttttgtgtgttaatattacctaattgtcctttg 25063284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 47133547 - 47133468
Alignment:
Q  372 ttttcacatttcttaagaaatg-ttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||| |||   |||| | |||||||||||||| ||||||||||||||||||||  |||||||| ||||    
T  47133547 ttttcacatttcttaaaaaaaaattgttaatgtaattaatgtgtttattttgtgtgttaatattattaaattgtcatttg 47133468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 450
Target Start/End: Original strand, 13145439 - 13145492
Alignment:
Q  397 tcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||| || ||||| ||||| |||||| ||||||||||||||||||||||||||    
T  13145439 tcagtatagttaatatgtctgttttgtatgttaatattaccaaattgtcctttg 13145492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 450
Target Start/End: Original strand, 34012074 - 34012131
Alignment:
Q  393 gttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||| ||||||||||||| |||| |||||||||||||  |||||||| ||||    
T  34012074 gttgtcagtgcaattaatgtgtctgttttatgtgttaatattatgaaattgtcttttg 34012131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 444
Target Start/End: Original strand, 3072147 - 3072207
Alignment:
Q  384 ttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgt 444  Q
    |||||||| ||||| |||| ||||||||||| |||||| |||||||||||||  |||||||    
T  3072147 ttaagaaaagttgttagtgcaattaatgtgtttattttatgtgttaatattattaaattgt 3072207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 414
Target Start/End: Complemental strand, 12845130 - 12845051
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgt 414  Q
    |||||||||||||| ||||| || ||   |||||| |||| ||||||||||||||||||||||| ||| | |||||||||    
T  12845130 tactccctccgtcccttaatataaccccccattgcatttttcacatttcttaagaaatgttgtctgtgcagttaatgtgt 12845051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 431
Target Start/End: Complemental strand, 23393619 - 23393560
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaat 431  Q
    |||||| |||| |||||||| ||||| | |||||||||||| |||||||||||| |||||    
T  23393619 ttttcatattttttaagaaaagttgttaatgtaattaatgtatctattttgtgtattaat 23393560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 40205660 - 40205614
Alignment:
Q  404 aattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||| |||||||||||||||| |||||||| | |||||||||||    
T  40205660 aattaatatgtctattttgtgtgtgaatattactagattgtcctttg 40205614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 51390642 - 51390566
Alignment:
Q  372 ttttcacatttcttaa-gaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||| |||   |||| | || ||||||||||||||||||||||||   ||||||||||||||| ||||    
T  51390642 ttttcacatttcttaaagaagaattgttaatgcaattaatgtgtctattttgtgtgt---tattaccaaattgtcatttg 51390566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 410 - 450
Target Start/End: Complemental strand, 291704 - 291664
Alignment:
Q  410 tgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||| |||||||||||| |||||||| ||||    
T  291704 tgtgtctattttgtatgttaatattactaaattgtcatttg 291664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 440
Target Start/End: Complemental strand, 37734000 - 37733932
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaa 440  Q
    ||||||||||| ||| ||||  |||| |||| ||||||| |||| ||||||||| ||||||||| ||||    
T  37734000 ttttcacattttttacgaaaaattgttagtgcaattaatttgtccattttgtgttttaatattatcaaa 37733932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 6e-44; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 333 - 442
Target Start/End: Original strand, 34877623 - 34877733
Alignment:
Q  333 atatactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaat 431  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  34877623 atatactccctccgtcctttaatgtagacattcattgcctttttcacatttcttaagaaatgttgtcagtgtaattaatttgtctgttttgtgtgttaat 34877722  T
Q  432 attaccaaatt 442  Q
    |||||||||||    
T  34877723 attaccaaatt 34877733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 335 - 450
Target Start/End: Complemental strand, 25017819 - 25017703
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    ||||||||||||||| ||||||||| || |||||| ||||| ||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  25017819 atactccctccgtcccttaatgtagacactcattgtctttttcacgtttcttaagaaatgttgtcagtataattaatgtgtctgttttgtgtgttaatat 25017720  T
Q  434 taccaaattgtcctttg 450  Q
    |||||||||||| ||||    
T  25017719 taccaaattgtcatttg 25017703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 336 - 442
Target Start/End: Complemental strand, 15967257 - 15967149
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt--cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    |||||| ||||||||||||||||| |||||||||||||||  |||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||||    
T  15967257 tactccttccgtcctttaatgtagacattcattgccttttttcacatttcttaagaaaggttgtcggtgtaattaatgtgtctgttttgtgtattaatat 15967158  T
Q  434 taccaaatt 442  Q
    |||||||||    
T  15967157 taccaaatt 15967149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 335 - 450
Target Start/End: Complemental strand, 21575025 - 21574909
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    ||||||||||||||| ||||||||| ||  ||||| ||||| |||||||||||||||||||| | |||||| |||||||||||||||||| |||||||||    
T  21575025 atactccctccgtcccttaatgtaggcacccattgtctttttcacatttcttaagaaatgtttttagtgtacttaatgtgtctattttgtatgttaatat 21574926  T
Q  434 taccaaattgtcctttg 450  Q
    |||||||||||||||||    
T  21574925 taccaaattgtcctttg 21574909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 334 - 442
Target Start/End: Original strand, 10933964 - 10934073
Alignment:
Q  334 tatactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaata 432  Q
    |||||||||||||| | ||||||||| |||| |||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||| ||||||||    
T  10933964 tatactccctccgttccttaatgtaggcatttattgcctttttcacattttttcagaaatgttgtcagtgtaattaatgtgtctgttttgtatgttaata 10934063  T
Q  433 ttaccaaatt 442  Q
    ||||||||||    
T  10934064 ttaccaaatt 10934073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 335 - 450
Target Start/End: Original strand, 36177251 - 36177367
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgccttttc-acatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    ||||||||||| ||| ||||||||| |||  |||| |||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  36177251 atactccctccatcccttaatgtaggcatctattgtcttttttacatttcttaagaaaagttatcagtgtaattaatgtgtctattttgtgtgttaatat 36177350  T
Q  434 taccaaattgtcctttg 450  Q
    ||| |||||||| ||||    
T  36177351 tacaaaattgtcatttg 36177367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 367 - 450
Target Start/End: Complemental strand, 15898575 - 15898492
Alignment:
Q  367 ttgccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| ||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  15898575 ttgcattttcacttttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcctttg 15898492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 27587835 - 27587913
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||    
T  27587835 ttttcacatttcttaagaaaagttgtcagtataattaatgtgtctgttttgtgtgttaatattactaaattgtcctttg 27587913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 333 - 450
Target Start/End: Complemental strand, 3247421 - 3247303
Alignment:
Q  333 atatactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaat 431  Q
    ||||||||||||||| | |||| ||||  |  ||||||||||| |||||||||||||||| |||| ||||||||||||| ||||| |||||| |||||||    
T  3247421 atatactccctccgttccttaacgtagatacccattgcctttttcacatttcttaagaaaagttgacagtgtaattaatatgtctgttttgtatgttaat 3247322  T
Q  432 attaccaaattgtcctttg 450  Q
    ||||| |||||||||||||    
T  3247321 attacgaaattgtcctttg 3247303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 3559134 - 3559056
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||  ||||  || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3559134 ttttcacatttcttaagaaaaattgttggtataattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 3559056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 39690593 - 39690515
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| |||||| |||||||||||||||| |||||||||||||| |||||||||||||    
T  39690593 ttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttg 39690515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 4738590 - 4738705
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||| ||| |||||| |  ||| ||||| ||||| ||||||||||||||||| ||||||||||||||||||| | | |||||||||||||||||    
T  4738590 tactccctccatcccttaatgcatgcatccattgtctttttcacatttcttaagaaatattgtcagtgtaattaatgtatttgttttgtgtgttaatatt 4738689  T
Q  435 accaaattgtcctttg 450  Q
    || |||||| ||||||    
T  4738690 actaaattgacctttg 4738705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 336 - 442
Target Start/End: Original strand, 27798116 - 27798223
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||||||| |||||| || ||| |||||  |||| ||||||| ||||||||| ||||||||||||||||| ||||| |||||||||||||||||    
T  27798116 tactccctccgtcccttaatgcaggcatccattgtatttttcacattttttaagaaatattgtcagtgtaattaatttgtctgttttgtgtgttaatatt 27798215  T
Q  435 accaaatt 442  Q
    | ||||||    
T  27798216 atcaaatt 27798223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 27642499 - 27642577
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| |||||| |||||||||||||||| |||||||||||||| ||||| |||||||    
T  27642499 ttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattatcctttg 27642577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 29866186 - 29866264
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| |||| ||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  29866186 ttttcacatttcttaagaaaagttgttagtgcaattaatatgtcttttttgtgtgttaatattaccaagttgtcctttg 29866264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 372 - 444
Target Start/End: Complemental strand, 10523381 - 10523309
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgt 444  Q
    |||||| |||| |||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  10523381 ttttcatattttttaagaaaagttatcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgt 10523309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 5845136 - 5845251
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||| ||||||||  || |||||| ||| ||||||||||| || |||||||||||| ||||||||||||||||||||| | | |||||||| ||||||||    
T  5845136 tacttcctccgtctcttgatgtaggcatccattgcctttttcatatttcttaagaattgttgtcagtgtaattaatgtatttgttttgtgtattaatatt 5845235  T
Q  435 accaaattgtcctttg 450  Q
    | ||||||||| ||||    
T  5845236 atcaaattgtcatttg 5845251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 20946084 - 20946162
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||| ||||||||||||| ||||| |||| |||||| ||||||||||||||||||||||||| ||||||||| ||||    
T  20946084 ttttcatatttcttaagaaacgttgttagtgcaattaacgtgtctattttgtgtgttaatattatcaaattgtcatttg 20946162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 30348184 - 30348106
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||| |||||| ||||| | | || ||||||||||||||||||||||||||||||||||||| |||||||    
T  30348184 ttttcacatttctgaagaaaagttgttaatttacttaatgtgtctattttgtgtgttaatattaccaaattttcctttg 30348106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 38972233 - 38972156
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||    ||||||||||||||||||||||||||    
T  38972233 ttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctatttaaa-tgttaatattaccaaattgtcctttg 38972156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 438
Target Start/End: Complemental strand, 43060617 - 43060551
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattacca 438  Q
    ||||||||||| |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  43060617 ttttcacattttttaataaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattacca 43060551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 21912117 - 21912195
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| |||||||| ||||| |||||| |||||||||||||||| |||||||||||||  |||||||| ||||    
T  21912117 ttttcacatttattaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattattaaattgtcttttg 21912195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 32067825 - 32067903
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| |||||||||||||||  | || |||| |||| ||||||||||||||||||||||||||||||||||||| ||||    
T  32067825 tttttacatttcttaagaaaaatagttagtgcaattcatgtgtctattttgtgtgttaatattaccaaattgtcatttg 32067903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 35569112 - 35569042
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |||| ||| |||||||||| |||||    
T  35569112 ttttcacatttcttaagaaaagttatcagtgtaattaatgtgtctgttttatgtattaatattactaaatt 35569042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 397 - 449
Target Start/End: Original strand, 129632 - 129684
Alignment:
Q  397 tcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  129632 tcagtgtaattaatgtgtctattttgtgtattaatattaccaaattgttcttt 129684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 436
Target Start/End: Original strand, 11980713 - 11980777
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattac 436  Q
    |||||| |||| |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  11980713 ttttcatattttttaataaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattac 11980777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 379 - 450
Target Start/End: Original strand, 600769 - 600840
Alignment:
Q  379 atttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||  |||| |||| |||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  600769 atttcttaagaaaacttgttagtgcaattaatgtgtctattatgtgtgttaatattatcaaattgtcatttg 600840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 372 - 439
Target Start/End: Original strand, 7510603 - 7510670
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaa 439  Q
    ||||||||||| |||||||| ||| | |||||||||||||||| | ||||||||||||||||||||||    
T  7510603 ttttcacattttttaagaaaagttattagtgtaattaatgtgtatgttttgtgtgttaatattaccaa 7510670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 372 - 435
Target Start/End: Original strand, 18729585 - 18729648
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatta 435  Q
    ||||||||||||||||||||  || |  ||||||||||||||||||||||||||||||||||||    
T  18729585 ttttcacatttcttaagaaaaattatttgtgtaattaatgtgtctattttgtgtgttaatatta 18729648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 374 - 433
Target Start/End: Complemental strand, 25690794 - 25690735
Alignment:
Q  374 ttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    |||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||||||    
T  25690794 ttcacatttcttaagaaaagttgtcggtgtaattaatgtgtatgttttgtgtgttaatat 25690735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 372 - 443
Target Start/End: Complemental strand, 36347708 - 36347637
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattg 443  Q
    |||||| ||||||||| ||| |||||||||||||||||||| ||| |||||||| ||||||||| |||||||    
T  36347708 ttttcagatttcttaataaaagttgtcagtgtaattaatgtatctgttttgtgtattaatattatcaaattg 36347637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 450
Target Start/End: Complemental strand, 3631257 - 3631149
Alignment:
Q  341 cctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaa 439  Q
    ||||||||| ||||||||| ||| ||||| ||||| |||||||||||| |||  ||||| ||||||||||||||||  |||||||||||||||||||  |    
T  3631257 cctccgtcccttaatgtaggcatccattgtctttttcacatttcttaaaaaaa-ttgtc-gtgtaattaatgtgtcggttttgtgtgttaatattacgca 3631160  T
Q  440 attgtcctttg 450  Q
    |||| ||||||    
T  3631159 attgacctttg 3631149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 376 - 450
Target Start/End: Complemental strand, 31642571 - 31642498
Alignment:
Q  376 cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||| |||| |||  ||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  31642571 cacatttattaaaaaaaattgtcagtgtaattaatgtgtct-ttttgtgtgttaatattaccaaactgtcttttg 31642498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 449
Target Start/End: Complemental strand, 33862923 - 33862845
Alignment:
Q  372 ttttcacatttctt-aagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||| |||||| |  ||||||||| ||||||||||||    
T  33862923 ttttcacatttctttaagaaaaattgtcagtgtaattaatgtgtctgttttgtatactaatattactaaattgtccttt 33862845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 4857605 - 4857523
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaat----gtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||| ||| ||||| ||||||||||||    ||||||||||| |||||||||||||| |||||||| ||||    
T  4857605 ttttcacatttcttaataaaagttgttagtgtaattaattaatgtgtctattttatgtgttaatattactaaattgtcatttg 4857523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 393 - 450
Target Start/End: Complemental strand, 12895295 - 12895238
Alignment:
Q  393 gttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  12895295 gttgtcggtgtaattaatgtgtctgttttgtgtattaatattaccaaattgtcttttg 12895238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 4745123 - 4745202
Alignment:
Q  372 ttttcacatttctt-aagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| || |||||| || || |||| ||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  4745123 ttttcacatttttttaagaaaagtagttagtgcaattaatgtgtttattttgtgggttaatattaccaaattgtcatttg 4745202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 450
Target Start/End: Original strand, 16496433 - 16496511
Alignment:
Q  371 cttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||  ||| ||||| |||||||||| | |||||| ||||||| |||||||||||||||| |||||||    
T  16496433 cttttcacatttcttaccaaaagttgttagtgtaattattatgtcta-tttgtgtattaatattaccaaattatcctttg 16496511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 450
Target Start/End: Original strand, 29874202 - 29874253
Alignment:
Q  399 agtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| ||||    
T  29874202 agtgtagttaatgtatctattttgtgtgttaatattaccaaattgtcatttg 29874253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 450
Target Start/End: Original strand, 41521184 - 41521263
Alignment:
Q  371 cttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||| |||||| ||||||||  |||| |||| ||||||| ||||||||||||||||||||||||  |||||||| ||||    
T  41521184 ctttttacattttttaagaaaaattgttagtgaaattaatatgtctattttgtgtgttaatattattaaattgtcatttg 41521263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 16222 - 16144
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||| | | || ||||| |||| ||||||||| |||||||| ||||| |||||||| |||||||||||||    
T  16222 ttttcacatttctaacggaaagttgttagtgcaattaatgtatctattttttgtgtgaatattactaaattgtcctttg 16144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 449
Target Start/End: Original strand, 33583810 - 33583887
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    |||||||||||||||| ||| ||||| | ||| || |||| | |||||||||||||||||||||| ||||| ||||||    
T  33583810 ttttcacatttcttaaaaaaagttgttaatgttatcaatgcgactattttgtgtgttaatattactaaattatccttt 33583887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 450
Target Start/End: Complemental strand, 9946487 - 9946387
Alignment:
Q  351 ttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    ||||||||| ||||||||| ||||| ||||||| |||| ||| ||||||  | |||||||||||||| ||||  || |||||||||| ||||| ||||||    
T  9946487 ttaatgtaggcattcattgtctttttcacattttttaataaaagttgtcgatataattaatgtgtctgttttacgtattaatattacgaaattatccttt 9946388  T
Q  450 g 450  Q
    |    
T  9946387 g 9946387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 444
Target Start/End: Complemental strand, 32402164 - 32402092
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgt 444  Q
    |||| |||||||| || ||| ||||||||| |||||||||||||| | ||| ||||| |||||||||||||||    
T  32402164 ttttgacatttctaaaaaaaagttgtcagtttaattaatgtgtctgtgttgcgtgttgatattaccaaattgt 32402092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 450
Target Start/End: Complemental strand, 40979341 - 40979241
Alignment:
Q  351 ttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    ||||||||| ||| ||||| ||||| || ||||||||| ||| |||||||  ||||||||  ||| | |||||||| |||||||||| ||||||||||||    
T  40979341 ttaatgtaggcatccattgtctttttcatatttcttaataaaagttgtcaaggtaattaacatgtatgttttgtgtattaatattacgaaattgtccttt 40979242  T
Q  450 g 450  Q
    |    
T  40979241 g 40979241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 14044605 - 14044535
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||||||||||||||||| ||||| | || | ||||| |||||||||| ||| ||||||||| ||||||    
T  14044605 ttttcacatttcttaagaaaagttgttaatgcagttaatatgtctattttatgtattaatattatcaaatt 14044535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 440
Target Start/End: Original strand, 16969371 - 16969439
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaa 440  Q
    ||||||||||| |||| |||  |||| ||| ||||||||||||||| ||||| ||||||||||| ||||    
T  16969371 ttttcacattttttaacaaaaattgttagtataattaatgtgtctaatttgtttgttaatattatcaaa 16969439  T

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Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 416
Target Start/End: Complemental strand, 20976397 - 20976353
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtct 416  Q
    |||||| |||||||||||||  |||||||||||||||||||||||    
T  20976397 ttttcatatttcttaagaaaatttgtcagtgtaattaatgtgtct 20976353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 449
Target Start/End: Complemental strand, 24781346 - 24781298
Alignment:
Q  401 tgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    |||||||||||||| |||||||| ||||||||||| |||||||| ||||    
T  24781346 tgtaattaatgtgtttattttgtatgttaatattatcaaattgttcttt 24781298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 10656589 - 10656657
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    ||||||||||||||||||||  |||| | || ||||||||||  |||||| |||||||| |||||||||||    
T  10656589 ttttcacatttcttaagaaaaattgttaatgcaattaatgtg--tattttatgtgttaaaattaccaaatt 10656657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 449
Target Start/End: Complemental strand, 5151267 - 5151230
Alignment:
Q  412 tgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  5151267 tgtcttttttgtgtattaatattaccaaattgtccttt 5151230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 440
Target Start/End: Original strand, 43453986 - 43454047
Alignment:
Q  379 atttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaa 440  Q
    ||||||||| ||| ||||| ||| |||||||||||||  |||||| ||||||||||| ||||    
T  43453986 atttcttaaaaaaagttgttagtataattaatgtgtcagttttgtatgttaatattatcaaa 43454047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 394
Target Start/End: Original strand, 27925336 - 27925396
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgt 394  Q
    ||||||||||||||| || |||||| ||  |||||| |||| |||||||||||||||||||    
T  27925336 atactccctccgtccctttatgtaggcacccattgcttttttcacatttcttaagaaatgt 27925396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 1e-39; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 336 - 442
Target Start/End: Complemental strand, 9718317 - 9718210
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||||||| ||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9718317 tactccctccgtcccttaatgtagccatccattgcatttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatatt 9718218  T
Q  435 accaaatt 442  Q
    ||||||||    
T  9718217 accaaatt 9718210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 335 - 450
Target Start/End: Original strand, 41665670 - 41665785
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||| |||||||| ||||||||| || ||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  41665670 atactctctccgtcccttaatgtaggcactcattgttttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatagt 41665769  T
Q  435 accaaattgtcctttg 450  Q
    | ||||||||||||||    
T  41665770 atcaaattgtcctttg 41665785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 336 - 450
Target Start/End: Complemental strand, 8065217 - 8065102
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcc-ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||||||| ||||||||| |   ||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8065217 tactccctccgtcccttaatgtaggctcccattgcccttttcacatttcctaagaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatatt 8065118  T
Q  435 accaaattgtcctttg 450  Q
    |||||||| |||||||    
T  8065117 accaaattatcctttg 8065102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 44424555 - 44424670
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||||||| ||||||||| || ||||||| |||| |||||||||||||||| ||||| |||||||||||||||||| |||||| ||||||||||    
T  44424555 tactccctccgtcccttaatgtaggcactcattgcatttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctgttttgtatgttaatatt 44424654  T
Q  435 accaaattgtcctttg 450  Q
    || |||||||||||||    
T  44424655 acgaaattgtcctttg 44424670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 334 - 432
Target Start/End: Original strand, 13534373 - 13534471
Alignment:
Q  334 tatactccctccgtcctttaatgtagccattcattgccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaata 432  Q
    ||||| |||||||||| ||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  13534373 tatacaccctccgtcccttaatgtaggcacctattgccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtttgttttgtgtgttaata 13534471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 15851491 - 15851606
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    ||||||||| |||| ||||||||| |||  |||| ||||| |||||||||||||||| ||||| |||||||||||||||||| |||| ||||||||||||    
T  15851491 tactccctctgtcccttaatgtagacatctattgtctttttcacatttcttaagaaaagttgtgagtgtaattaatgtgtctgttttttgtgttaatatt 15851590  T
Q  435 accaaattgtcctttg 450  Q
    |  |||||||||||||    
T  15851591 atgaaattgtcctttg 15851606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 17663621 - 17663699
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| ||||||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  17663621 ttttcacatttcttaagaaaagttgttagtgtaattaatgtgcctattttatgtgttaatattactaaattgtcctttg 17663699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 28265059 - 28264981
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| |||||||||||||||||||||| | ||||||| |||||||||||||||||||| ||||    
T  28265059 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgcgttaatattaccaaattgtcatttg 28264981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 45214722 - 45214800
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||  ||||||| ||||||    
T  45214722 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattttcaaattgccctttg 45214800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 4398631 - 4398554
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  4398631 ttttcacattt-ttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattacgaaattgtcatttg 4398554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 11459150 - 11459228
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||| |||| |||||| |||||| |||||||||| ||||||||||||||||||| |||||||||||||    
T  11459150 ttttcacatttcttatgaaaagttgtcggtgtaaataatgtgtctgttttgtgtgttaatattactaaattgtcctttg 11459228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 380 - 450
Target Start/End: Original strand, 14420682 - 14420752
Alignment:
Q  380 tttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14420682 tttctaaagaaaagttgttagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcctttg 14420752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 20361980 - 20362058
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||  |||| |||||| |||||||||||||||| |||||||||||||| |||||||||||||    
T  20361980 ttttcacatttcttaagaaaaattgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttg 20362058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 37355033 - 37355111
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| |||||  ||||||||||||||||| ||||||||||||||||||| |||||||| ||||    
T  37355033 ttttcacatttcttaagaaaagttgtttgtgtaattaatgtgtctcttttgtgtgttaatattacaaaattgtcatttg 37355111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 372 - 448
Target Start/End: Original strand, 3645320 - 3645396
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctt 448  Q
    |||||||||||||||||||| ||||| ||| || |||||||||||||||||||| |||||||||| |||||||||||    
T  3645320 ttttcacatttcttaagaaaagttgttagtttacttaatgtgtctattttgtgtattaatattactaaattgtcctt 3645396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 343 - 450
Target Start/End: Complemental strand, 31644580 - 31644472
Alignment:
Q  343 tccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaat 441  Q
    ||||||||||||||||| ||| ||||| ||||| |||||||  ||||||| ||| ||||| |||||||||||||| |||| |||||||||||||| ||||    
T  31644580 tccgtcctttaatgtaggcatccattgtctttttcacattttataagaaaagttatcagtttaattaatgtgtctgttttttgtgttaatattacaaaat 31644481  T
Q  442 tgtcctttg 450  Q
    |||| ||||    
T  31644480 tgtcatttg 31644472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 372 - 448
Target Start/End: Original strand, 41865713 - 41865789
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctt 448  Q
    |||||||||||||||||||| |||||  || |||||||||||||||||||||||||||| ||||||||||| |||||    
T  41865713 ttttcacatttcttaagaaaagttgttggtctaattaatgtgtctattttgtgtgttaacattaccaaattatcctt 41865789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 450
Target Start/End: Complemental strand, 17251106 - 17250991
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||||||  |||||||||  ||  |||| ||||| ||||||| |||||||| ||||| ||| |||||||||||||| |||||||||||||||||    
T  17251106 tactccctccgtctcttaatgtaggtatctattgtctttttcacattttttaagaaaagttgttagtataattaatgtgtctgttttgtgtgttaatatt 17251007  T
Q  435 accaaattgtcctttg 450  Q
    || |||||||| ||||    
T  17251006 acaaaattgtcatttg 17250991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 372 - 443
Target Start/End: Original strand, 27749509 - 27749580
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattg 443  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| |||||||| |||||||||| ||||||    
T  27749509 ttttcacatttcttaagaaaagttgtcagtgtaattaatatgtctgttttgtgtattaatattactaaattg 27749580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 247657 - 247735
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| ||||| || ||||| |||||||||||||||||||||||||||||||||||||  |||||| ||||||    
T  247657 ttttcacattttttaaggaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattataaaattgccctttg 247735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 21012850 - 21012928
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||| ||||||||||||| ||||| |||| ||||||||||| |||||||||||||||||||| |||||| |||||||    
T  21012850 ttttcaaatttcttaagaaaagttgttagtgcaattaatgtgtttattttgtgtgttaatattatcaaattatcctttg 21012928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 24774862 - 24774940
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| ||||||||  || | |||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  24774862 ttttcacattttttaagaaaatttattagtgtaattaatgtatctattttgtgtgttaatattaccaaattgtcttttg 24774940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 27297574 - 27297652
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||   ||| |||||||||||||||||| ||||||||||||||||||| ||||| |||||||    
T  27297574 ttttcacatttcttaagaaaaactgttagtgtaattaatgtgtctgttttgtgtgttaatattacaaaattatcctttg 27297652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 44274775 - 44274697
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| |||||||| ||||||| |||||||||||||||| |||| |||||||||||| |||||||||| ||||    
T  44274775 ttttcacattttttaagaaaagttgtcaatgtaattaatgtgtctgttttatgtgttaatattgccaaattgtcatttg 44274697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 44421446 - 44421524
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||  ||||||||||||||||||| ||| |||||| |||||||||||| |||||||| ||||    
T  44421446 ttttcacatttcttaagaaaaattgtcagtgtaattaatgtatctgttttgtttgttaatattactaaattgtcatttg 44421524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 35178901 - 35178828
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtc 445  Q
    |||||||||||||||||||| |||||||||||| ||||||||| | ||||||||| ||||||||| ||||||||    
T  35178901 ttttcacatttcttaagaaaagttgtcagtgtagttaatgtgtatgttttgtgtgataatattacgaaattgtc 35178828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 2131754 - 2131824
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||| ||||||||||||||| ||||| |||| ||||||  |||||||||||||||||||||||||||||||    
T  2131754 tttttacatttcttaagaaaagttgttagtgcaattaacatgtctattttgtgtgttaatattaccaaatt 2131824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 8384080 - 8384002
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||| |||||||||||||  | || |||| ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  8384080 ttttcatatttcttaagaaaaatagttagtgcaattaatgtgtttattttgtgtgttaatattaccaaattgtcatttg 8384002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 383 - 453
Target Start/End: Original strand, 11071676 - 11071746
Alignment:
Q  383 cttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgctt 453  Q
    ||||||||| ||||| |||| |||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  11071676 cttaagaaaagttgttagtgcaattaatgtgtctaatttatgtgttaatattactaaattgtcctttgctt 11071746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 26512068 - 26512146
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||| |||  |||| ||| |||||||||||| |||||| |||||||||||||| |||||||||||||    
T  26512068 ttttcacatttcttaaaaaaaattgttagtataattaatgtgtttattttatgtgttaatattactaaattgtcctttg 26512146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 34329999 - 34330077
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||| ||| ||||| ||| ||||||||||  || ||||||||||||||||||| |||||||||||||    
T  34329999 ttttcacatttcttaaaaaaagttgttagtataattaatgtacctgttttgtgtgttaatattacaaaattgtcctttg 34330077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 35241816 - 35241746
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||| ||||||| |||||||||||||| ||||||||||||||||| |||||| ||||||||||| ||||||    
T  35241816 tttttacatttcataagaaatgttgtctgtgtaattaatgtgtctgttttgtttgttaatattatcaaatt 35241746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 43650031 - 43650109
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| ||||||||| |||||  ||||||||||||||||||||||| |||||| |||||||||||| ||||||| |||||    
T  43650031 tttttacatttctttagaaaaattgtcagtgtaattaatgtgtctgttttgtatgttaatattactaaattgttctttg 43650109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 450
Target Start/End: Complemental strand, 45150842 - 45150766
Alignment:
Q  374 ttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||| |||||  ||| |||||||||||  ||||||||||||||||||||  ||||||||||||    
T  45150842 ttcacatttcttaagaaaagttgtttgtgcaattaatgtgttcattttgtgtgttaatattactcaattgtcctttg 45150766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 43709915 - 43709994
Alignment:
Q  372 ttttcacatttcttaag-aaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||| |||  |||| |||| |||||||| ||||||||||||||||||||||||  ||||||||||||    
T  43709915 ttttcacatttcttaagcaaaaattgttagtgcaattaatgcgtctattttgtgtgttaatattacttaattgtcctttg 43709994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 1246521 - 1246443
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||| ||| ||||||||| ||||||| |||| | ||||||||||||||||||  ||||||| |||||    
T  1246521 ttttcacatttcttaaaaaaagttgtcagtataattaacgtgtttgttttgtgtgttaatattatgaaattgttctttg 1246443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 3237718 - 3237798
Alignment:
Q  372 ttttcacatttcttaagaaa--tgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| ||||||||  |||| | | |||||||||||||||| ||||||||||||||||||| ||||| |||||||    
T  3237718 ttttcacattttttaagaaaagtgttattaatgtaattaatgtgtctgttttgtgtgttaatattacaaaattatcctttg 3237798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 40346189 - 40346116
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtc 445  Q
    ||||||||||| |||||||| |||||  ||| |||||||||||  |||||||||||||||||||| ||||||||    
T  40346189 ttttcacattttttaagaaaagttgtttgtgcaattaatgtgttcattttgtgtgttaatattactaaattgtc 40346116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 339 - 450
Target Start/End: Original strand, 3326687 - 3326799
Alignment:
Q  339 tccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattacc 437  Q
    ||||||||||  ||||||||| || | |||||||||| || |||| |||| |||  ||||| ||||||||||||||||| |||||| | |||||||||      
T  3326687 tccctccgtctcttaatgtaggcacttattgcctttttcatattttttaaaaaaaattgtcggtgtaattaatgtgtctgttttgtatattaatattatt 3326786  T
Q  438 aaattgtcctttg 450  Q
    |||||||||||||    
T  3326787 aaattgtcctttg 3326799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 28733785 - 28733898
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||| ||||| ||||||||| ||  ||||  ||||| ||||||| ||||||||  ||||| ||||||||||||||||| |||  | ||||||||||    
T  28733785 tactcccttcgtcccttaatgtaggcacccattttctttttcacattttttaagaaaaattgtcggtgtaattaatgtgtctgttt--tatgttaatatt 28733882  T
Q  435 accaaattgtcctttg 450  Q
    ||||||||||| ||||    
T  28733883 accaaattgtcatttg 28733898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 450
Target Start/End: Original strand, 4033585 - 4033656
Alignment:
Q  379 atttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||| ||| | |||||||||||||| ||| |||| |||||||||||||| ||||||| |||||    
T  4033585 atttcttaagaaaagttattagtgtaattaatgtttctgttttctgtgttaatattactaaattgttctttg 4033656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 450
Target Start/End: Original strand, 7255621 - 7255676
Alignment:
Q  395 tgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| ||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  7255621 tgtcggtgtaattaatgtgtctgttttgtgtattaatattaccaaattatcctttg 7255676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 431
Target Start/End: Complemental strand, 42250984 - 42250925
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaat 431  Q
    ||||||||||||||| |||| ||||  ||||||||||||||||||||||||||| |||||    
T  42250984 ttttcacatttcttatgaaaagttggtagtgtaattaatgtgtctattttgtgttttaat 42250925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 400 - 450
Target Start/End: Complemental strand, 375425 - 375375
Alignment:
Q  400 gtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||| ||||    
T  375425 gtgtaattaatgtgtctattttgtgtgttagtattatcaaattgtcatttg 375375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 422
Target Start/End: Original strand, 2395799 - 2395849
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttg 422  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  2395799 tttttacatttcttaagaaaagttgttagtgtaattaatgtgtctattttg 2395849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 449
Target Start/End: Complemental strand, 13477141 - 13477064
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    ||||||||||| ||||||||  |||| |||| ||||||| ||| |||||| |||||||||||||| | ||||||||||    
T  13477141 ttttcacattttttaagaaaaattgttagtgcaattaatatgtttattttatgtgttaatattactagattgtccttt 13477064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 442
Target Start/End: Original strand, 14527650 - 14527690
Alignment:
Q  402 gtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  14527650 gtaattaatgtgtctattttgtgtgttaatattaccgaatt 14527690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 449
Target Start/End: Original strand, 23464705 - 23464757
Alignment:
Q  397 tcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    ||||| |||||||||||||||||||||| || ||||||| |||||||||||||    
T  23464705 tcagtataattaatgtgtctattttgtgcgtaaatattatcaaattgtccttt 23464757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 376 - 423
Target Start/End: Complemental strand, 2917201 - 2917154
Alignment:
Q  376 cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgt 423  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  2917201 cacatttcttaagaaaagttgttagtataattaatgtgtctattttgt 2917154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 403 - 450
Target Start/End: Original strand, 4758054 - 4758101
Alignment:
Q  403 taattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||| ||||||||||||||||||||  |||||||||||||    
T  4758054 taattaatgtgtttattttgtgtgttaatattatgaaattgtcctttg 4758101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 8667635 - 8667714
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgt-gttaatattaccaaattgtcctttg 450  Q
    |||||||||||| ||||||| ||||||||| |||||||| ||||| |||||| |  ||||||||| |||||| |||||||    
T  8667635 ttttcacatttcctaagaaaagttgtcagtctaattaatatgtctgttttgtatctttaatattatcaaattctcctttg 8667714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 28190595 - 28190673
Alignment:
Q  372 ttttcacatttctta-agaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| |||||||||| ||||| ||||| ||| |||||||| ||| |||||| ||||||||||||||||||||||| ||||    
T  28190595 ttttgacatttcttagagaaa-gttgttagtataattaatatgtttattttttgtgttaatattaccaaattgtcatttg 28190673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 450
Target Start/End: Complemental strand, 35453814 - 35453763
Alignment:
Q  399 agtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||||| | |||||||||||| ||||||| |||||    
T  35453814 agtgtaattaatgtgtctattttatatgttaatattactaaattgttctttg 35453763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 430
Target Start/End: Complemental strand, 2048936 - 2048878
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaa 430  Q
    |||||||||||||||||||| |||||  |||||| |||||| |||||||| ||||||||    
T  2048936 ttttcacatttcttaagaaaagttgttggtgtaaataatgtctctattttatgtgttaa 2048878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 7278721 - 7278643
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| ||||||||  ||||||||||||||||| ||| | |||||||||   |||||| ||||||| ||||||    
T  7278721 ttttcacatttgttaagaaaaattgtcagtgtaattaatatgtttgttttgtgtgaatatattatcaaattgccctttg 7278643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 38449822 - 38449752
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||||||||||||| ||| ||| |   |||||||||||||||| |||||||| ||||||||| ||||||    
T  38449822 ttttcacatttcttaataaaagttatttttgtaattaatgtgtctgttttgtgtattaatattatcaaatt 38449752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 449
Target Start/End: Original strand, 6597853 - 6597930
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    ||||||||||| |||  ||| |||||   |||||||||| ||||||||||||||||||| ||||||||| | ||||||    
T  6597853 ttttcacattttttacaaaaagttgttgatgtaattaatatgtctattttgtgtgttaacattaccaaaatatccttt 6597930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 440
Target Start/End: Complemental strand, 920764 - 920696
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaa 440  Q
    ||||||||||||||||  ||||| || |||||| ||||| ||| |||||||| ||||||||||| ||||    
T  920764 ttttcacatttcttaaataatgtagttagtgtagttaatatgtttattttgtatgttaatattatcaaa 920696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 436
Target Start/End: Original strand, 20426950 - 20427002
Alignment:
Q  384 ttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattac 436  Q
    ||||||||  |||| |||| |||||||||||||||||||||||||| ||||||    
T  20426950 ttaagaaaaattgttagtgaaattaatgtgtctattttgtgtgttattattac 20427002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 440
Target Start/End: Complemental strand, 34042164 - 34042096
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaa 440  Q
    ||||||||||| || | |||  |||| |||  |||||||||||||||||||| ||||||||||||||||    
T  34042164 ttttcacatttttttaaaaaaattgttagttcaattaatgtgtctattttgtatgttaatattaccaaa 34042096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 3337683 - 3337761
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| | |||   || ||| ||||||| |||||||  ||||||||||| ||||||||| ||||    
T  3337683 ttttcacatttcttaagaaaagatgttgctgcaatcaatgtgtatattttgcatgttaatattagcaaattgtcatttg 3337761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 450
Target Start/End: Original strand, 32677476 - 32677550
Alignment:
Q  376 cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||  |||| | |  |||||||||||||||||| || |||||||||  ||||||||| ||||    
T  32677476 cacatttcttaagaaaaattgttaatacaattaatgtgtctattttatgggttaatattttcaaattgtcatttg 32677550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 38982187 - 38982109
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaatta--------atgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||| ||||||||||||||| |||||| |||||||||        |||| ||| |||||||||||||||||||||||||    
T  38982187 tttttacatttcttaagaaaagttgtctgtgtaattaatgtattaatgtatctgttttgtgtgttaatattaccaaatt 38982109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 413
Target Start/End: Complemental strand, 41327862 - 41327821
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtg 413  Q
    |||||||||||| ||||||| |||||||||| ||||||||||    
T  41327862 ttttcacatttcataagaaaagttgtcagtgcaattaatgtg 41327821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 394 - 430
Target Start/End: Complemental strand, 6275653 - 6275617
Alignment:
Q  394 ttgtcagtgtaattaatgtgtctattttgtgtgttaa 430  Q
    |||| |||| |||||||||||||||||||||||||||    
T  6275653 ttgttagtgcaattaatgtgtctattttgtgtgttaa 6275617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 4e-36; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 334 - 450
Target Start/End: Original strand, 25198248 - 25198364
Alignment:
Q  334 tatactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaata 432  Q
    ||||||||||| ||| |||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||||||||| | |||||||||||||||    
T  25198248 tatactccctcggtc-tttaatgtaggcatccattgcctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaata 25198346  T
Q  433 ttaccaaattgtcctttg 450  Q
    ||||||||||||||||||    
T  25198347 ttaccaaattgtcctttg 25198364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 335 - 450
Target Start/End: Original strand, 41086935 - 41087049
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    ||||||| | ||||| |||||||||| |  |||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||    
T  41086935 atactccttacgtcccttaatgtagc-acccattgccttttcacatttcttaagaaatattgtcagtgtaattaatgtgtctgatttgtgtgttaatatt 41087033  T
Q  435 accaaattgtcctttg 450  Q
    | |||||| |||||||    
T  41087034 atcaaattttcctttg 41087049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 26878837 - 26878759
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26878837 ttttcacatttcttaagaaaagttgttaatgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 26878759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 335 - 450
Target Start/End: Original strand, 37956081 - 37956196
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattg-ccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    ||||||||||||||| |||||||||  |  ||||| | |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  37956081 atactccctccgtcccttaatgtaggta-ccattgtctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatat 37956179  T
Q  434 taccaaattgtcctttg 450  Q
    ||| || ||||||||||    
T  37956180 tacgaatttgtcctttg 37956196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 14577761 - 14577683
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  14577761 ttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctattttgtttgttaatattaccaaattgtactttg 14577683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 333 - 450
Target Start/End: Original strand, 25184987 - 25185105
Alignment:
Q  333 atatactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaat 431  Q
    ||||||||| | ||||| ||||||||  ||  ||||||||||| |||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  25184987 atatactccattcgtcccttaatgtatgcacccattgcctttttcacatttcttaagaaaagttgtcagtgtaactaatgtgtctgttttgtgtgttaat 25185086  T
Q  432 attaccaaattgtcctttg 450  Q
    ||||| |||||||| ||||    
T  25185087 attacgaaattgtcatttg 25185105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 335 - 450
Target Start/End: Complemental strand, 24512314 - 24512198
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    ||||| ||||||||| ||||||||| ||| ||||  ||||| ||||||| ||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  24512314 atacttcctccgtcccttaatgtaggcatccattatctttttcacattttttaagaaaatttgtcagtgtaattaatgtgtctgttttgtgtgttaatat 24512215  T
Q  434 taccaaattgtcctttg 450  Q
    || ||||||||| ||||    
T  24512214 tatcaaattgtcttttg 24512198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 336 - 450
Target Start/End: Complemental strand, 38770333 - 38770218
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||||| | ||||||||| ||  ||||| ||||| || ||||||||||| | |||||||||||||||||||||| |||||||||||||||||||    
T  38770333 tactccctccgttccttaatgtaggcacgcattgtctttttcatatttcttaagataagttgtcagtgtaattaatgtgtttattttgtgtgttaatatt 38770234  T
Q  435 accaaattgtcctttg 450  Q
    || |||||||| ||||    
T  38770233 acgaaattgtcatttg 38770218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 336 - 450
Target Start/End: Complemental strand, 40337337 - 40337222
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||||||| ||||||||| ||| ||||| ||||| ||||||||||| |||| ||| ||||| |||||||||||| | |||||| ||||||||||    
T  40337337 tactccctccgtcccttaatgtaggcatccattgtctttttcacatttcttatgaaaagttatcagtataattaatgtgtatgttttgtatgttaatatt 40337238  T
Q  435 accaaattgtcctttg 450  Q
    || |||||||||||||    
T  40337237 acaaaattgtcctttg 40337222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 24962474 - 24962396
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| |||||| |||||||||||||||| |||||||||||||| |||||||||||||    
T  24962474 ttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttg 24962396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 372 - 449
Target Start/End: Complemental strand, 57297 - 57220
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  57297 ttttcacatttcttaagaaaagttgtcggtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgttcttt 57220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 334 - 449
Target Start/End: Original strand, 7772470 - 7772586
Alignment:
Q  334 tatactccctccgtcctttaatgtagccattcattgccttttc-acatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaata 432  Q
    |||||||| | ||||| |||| ||||||||  |||| |||||  |||||| |||||||| ||||||| |||||||||||||||| |||||||||||||||    
T  7772470 tatactccattcgtcccttaacgtagccatctattgtcttttttacattttttaagaaaagttgtcattgtaattaatgtgtctgttttgtgtgttaata 7772569  T
Q  433 ttaccaaattgtccttt 449  Q
    |||| ||||||||||||    
T  7772570 ttacgaaattgtccttt 7772586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 336 - 435
Target Start/End: Complemental strand, 39543809 - 39543709
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||| ||||||||||||||||| ||   |||||||||| || |||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  39543809 tactccatccgtcctttaatgtaggcacctattgcctttttcatatttcttaagaaatgttgtccgtgtaattaatgtgtctgttttgtgcgttaatatt 39543710  T
Q  435 a 435  Q
    |    
T  39543709 a 39543709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 332 - 450
Target Start/End: Complemental strand, 16644186 - 16644067
Alignment:
Q  332 aatatactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaa 430  Q
    |||||||||| ||||||| |  |||||  || ||||||| |||| |||||||||||||||| ||||| |||||||||||||||| |||||||||||||||    
T  16644186 aatatactccttccgtccctgtatgtaagcactcattgcatttttcacatttcttaagaaaagttgttagtgtaattaatgtgtatattttgtgtgttaa 16644087  T
Q  431 tattaccaaattgtcctttg 450  Q
    ||| || ||||||| |||||    
T  16644086 tatcactaaattgttctttg 16644067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 2562839 - 2562761
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||   |||||||||||||||||||||| |||||| |||||||||||| |||||||||||||    
T  2562839 ttttcacatttcttaagaaaaactgtcagtgtaattaatgtgtctgttttgtatgttaatattacgaaattgtcctttg 2562761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 31746514 - 31746436
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||  |||| |||| ||||||||||||||||||||||||||||||||| |||||||| ||||    
T  31746514 ttttcacatttcttaagaaaaattgttagtgcaattaatgtgtctattttgtgtgttaatattacaaaattgtcatttg 31746436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 372 - 444
Target Start/End: Complemental strand, 14522713 - 14522641
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgt 444  Q
    ||||||||||||||||||||  |||| |||||||||||||||| | |||||||||||||||||||||||||||    
T  14522713 ttttcacatttcttaagaaaaattgttagtgtaattaatgtgtatgttttgtgtgttaatattaccaaattgt 14522641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 450
Target Start/End: Complemental strand, 16002870 - 16002754
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    ||||||| ||||||| ||||||||| ||  |||| |||||| ||||||| |||||||| |||||| ||||||||||||||||  ||||||||||||||||    
T  16002870 atactccatccgtcccttaatgtagacacccatttcctttttcacattttttaagaaaagttgtctgtgtaattaatgtgtcagttttgtgtgttaatat 16002771  T
Q  434 taccaaattgtcctttg 450  Q
    ||  ||||| |||||||    
T  16002770 taagaaattatcctttg 16002754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 336 - 450
Target Start/End: Complemental strand, 38773495 - 38773379
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaat-gttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    |||||||||||||| ||||||||| ||  ||||| ||||| |||||||||||| |||  |||||||||| ||||||||||||| ||||||||||||| ||    
T  38773495 tactccctccgtcccttaatgtaggcaaccattgtctttttcacatttcttaaaaaaaagttgtcagtgcaattaatgtgtctgttttgtgtgttaacat 38773396  T
Q  434 taccaaattgtcctttg 450  Q
    ||| |||||||| ||||    
T  38773395 tacgaaattgtcttttg 38773379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 450
Target Start/End: Complemental strand, 38203138 - 38203023
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcatt-gccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||||||||||||||||| ||  | ||  | |||||||||||||||| ||| |||||| ||||||||||| ||| | |||||||||||||||||    
T  38203138 tactccctccgtcctttaatgtaggcacccgttatctttttcacatttcttaataaaagttgtcggtgtaattaatatgtttgttttgtgtgttaatatt 38203039  T
Q  435 accaaattgtcctttg 450  Q
    || |||||||| ||||    
T  38203038 acgaaattgtcatttg 38203023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 12998802 - 12998724
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| |||||||||  ||||||||||  |||||||||||| |||||||| |||||||||||||    
T  12998802 ttttcacatttcttaagaaaagttgtcagttcaattaatgtgcatattttgtgtgtgaatattactaaattgtcctttg 12998724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 446
Target Start/End: Original strand, 22590372 - 22590446
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcc 446  Q
    ||||||||||||||||||||  |||| |||| |||||||||||||||||| ||||||||||| ||||||||||||    
T  22590372 ttttcacatttcttaagaaaatttgttagtgcaattaatgtgtctattttttgtgttaatatcaccaaattgtcc 22590446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 37141723 - 37141801
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| |||| ||| |||||||||||||||||||| ||| ||||||||||||||||||| |||||||| ||||    
T  37141723 ttttcacattttttaaaaaaagttgtcagtgtaattaatgtatctgttttgtgtgttaatattacgaaattgtcatttg 37141801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 40790786 - 40790863
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||  ||||||| ||||||||||||||||||| ||||    
T  40790786 ttttcacatttcttaagaaaagttgtcagtgtaattaatgcgtct-gtttgtgtattaatattaccaaattgtcatttg 40790863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 43980692 - 43980622
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||||||||||||||||| ||||| |||||| |||||||||||||||| |||||||||||||| |||||    
T  43980692 ttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaatt 43980622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 367 - 450
Target Start/End: Original strand, 36437492 - 36437576
Alignment:
Q  367 ttgccttttc-acatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||| |||||| ||||||||   ||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  36437492 ttgccttttccacattttttaagaaaaaatgttagtgcaattaatgtgtctattttgtgtgttaacattaccaaattgtcctttg 36437576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 40517740 - 40517815
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| |||||||| |||||||| ||||   |||||||| |||||||||||||||||||||||||||||||||    
T  40517740 ttttcacattttttaagaaaagttgtcagagtaa---atgtgtctgttttgtgtgttaatattaccaaattgtcctttg 40517815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 24276664 - 24276588
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||| ||| ||||| ||| |||||||||||||||  |||||||||||||||||||||||||| ||||    
T  24276664 ttttcacatttcttaaaaaaagttgttagtataattaatgtgtcta--ttgtgtgttaatattaccaaattgtcatttg 24276588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 885459 - 885536
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| |||||||| |||||||||||||||| | |||||  ||||||||||||||||| ||||||||||||||    
T  885459 ttttcacatttattaagaaaagttgtcagtgtaattattatgtct-gtttgtgtgttaatattatcaaattgtcctttg 885536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 3113642 - 3113564
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||| |||  || |||||||||||||| ||||| |||||||||||||||||| ||||||||| ||||    
T  3113642 ttttcacatttcttaaaaaaaattatcagtgtaattaatatgtctgttttgtgtgttaatattatcaaattgtcttttg 3113564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 446
Target Start/End: Complemental strand, 5191657 - 5191584
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcc 446  Q
    ||||||||||||||||||||  |||| || | ||||||||||||| |||||||||||||||||||||||||||||    
T  5191657 ttttcacatttcttaagaaaaattgttag-gcaattaatgtgtctgttttgtgtgttaatattaccaaattgtcc 5191584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 7172216 - 7172294
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||  || |  ||||||||||||||||||||||||||||||||||||  |||||||| ||||    
T  7172216 ttttcacatttcttaagaaaactttttggtgtaattaatgtgtctattttgtgtgttaatattataaaattgtcatttg 7172294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 14847030 - 14846952
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| |||||||| |||||| |||||||||||||||||  |||||| ||||||||||||| |||||| ||||    
T  14847030 ttttcacattttttaagaaaagttgtcggtgtaattaatgtgtctgctttgtgcgttaatattaccatattgtcttttg 14846952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 25888592 - 25888670
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| ||||||||||||||| ||||| |||||||||||| |||||||||||| ||||||||||| || |||||| ||||    
T  25888592 tttttacatttcttaagaaaagttgttagtgtaattaatatgtctattttgtatgttaatattatcatattgtcatttg 25888670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 31673594 - 31673671
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| |||||||| |||||  ||||||||||||||| |||||||| |||||||||||||||||| |||||||    
T  31673594 ttttcacattttttaagaaaagttgtg-gtgtaattaatgtgtttattttgtatgttaatattaccaaattatcctttg 31673671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 38761467 - 38761389
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||| |||| |||| ||| |||||||||||||||||||||||| ||||||||||||||||||  |||||||| ||||    
T  38761467 ttttcatatttattaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattatgaaattgtcatttg 38761389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 45185376 - 45185298
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||||  |||||| ||||||||| |||| ||| ||||||||| ||||||||||||||    
T  45185376 ttttcacatttcttaagaaaagttgtcgttgtaataaatgtgtctgttttatgtattaatattatcaaattgtcctttg 45185298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 45203756 - 45203833
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| |||||||||||||||| || | |||| |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  45203756 tttttacatttcttaagaaatttttt-agtgcaattaatgtgtctattttgtatgttaatattaccaacttgtcctttg 45203833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 334 - 434
Target Start/End: Complemental strand, 4274056 - 4273955
Alignment:
Q  334 tatactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaata 432  Q
    |||||||||| ||||| ||||||||| ||   |||| ||||| ||||||||||||||||| |||| |||||||||||||||| | |||| ||||||||||    
T  4274056 tatactcccttcgtccattaatgtagacacgtattgtctttttcacatttcttaagaaatattgttagtgtaattaatgtgtttgttttatgtgttaata 4273957  T
Q  433 tt 434  Q
    ||    
T  4273956 tt 4273955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 365 - 441
Target Start/End: Complemental strand, 31252770 - 31252695
Alignment:
Q  365 cattgccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaat 441  Q
    |||| |||||||||||||||||| |||  || |||||||||||||||||||| ||||||||||||||||||| ||||    
T  31252770 cattcccttttcacatttcttaaaaaaa-ttatcagtgtaattaatgtgtctgttttgtgtgttaatattacgaaat 31252695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 379 - 450
Target Start/End: Original strand, 14739433 - 14739504
Alignment:
Q  379 atttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| |||||||| |||||| ||||||||||||||| |||||| | |||||||||||||||||| |||||||    
T  14739433 attttttaagaaaagttgtccgtgtaattaatgtgtttattttatatgttaatattaccaaattatcctttg 14739504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 17933701 - 17933780
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgtt-aatattaccaaattgtcctttg 450  Q
    |||||||||||| |||||||  |||||  |||||||||||||||||||||||||||| |||||||||||| |||| ||||    
T  17933701 ttttcacatttcgtaagaaaaattgtcgatgtaattaatgtgtctattttgtgtgttaaatattaccaaactgtcatttg 17933780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 371 - 450
Target Start/End: Complemental strand, 36309704 - 36309627
Alignment:
Q  371 cttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||| |||| |||| |  |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  36309704 cttttcacatttcttaa-aaat-ttgttaccgtaattaatgtgtctattttgtgtgttaatattatcaaattgtcatttg 36309627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 367 - 450
Target Start/End: Original strand, 44255445 - 44255528
Alignment:
Q  367 ttgccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| ||||||||||| |||||||| | ||| || |||||||||||| || |||||||||||||||||| ||||||||| ||||    
T  44255445 ttgctttttcacatttgttaagaaaagatgtgagcgtaattaatgtgccttttttgtgtgttaatattatcaaattgtcatttg 44255528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 450
Target Start/End: Original strand, 12762871 - 12762917
Alignment:
Q  404 aattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  12762871 aattaatgtgtctattttgtgtgttaatattactaaattgtcctttg 12762917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 14906598 - 14906676
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| || | ||| ||| | | |||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  14906598 ttttcacattttttcataaaagttattaatgtaattaatatgtctattttgtgtgttaatattaccaaattatcctttg 14906676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 384 - 450
Target Start/End: Complemental strand, 30262635 - 30262569
Alignment:
Q  384 ttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| ||| ||||| |||| |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  30262635 ttaaaaaaagttgttagtgcaattaatgtgtctattttgtatgttaatattaccaaattgtcatttg 30262569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 34882667 - 34882737
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    ||||||||||| ||||||||  |||| | || |||||||||||||||||||||||||||||||| ||||||    
T  34882667 ttttcacattttttaagaaaaattgttaatgcaattaatgtgtctattttgtgtgttaatattatcaaatt 34882737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 377 - 450
Target Start/End: Complemental strand, 45183965 - 45183892
Alignment:
Q  377 acatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||| |||||||  ||||| ||| ||| | |||| ||||||||||||||||||||||||||||    
T  45183965 acatttcttaagaaaagttgtcatagtaataaatatgtttgttttatgtgttaatattaccaaattgtcctttg 45183892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 374 - 442
Target Start/End: Complemental strand, 3006888 - 3006820
Alignment:
Q  374 ttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||| ||||||||||||| ||||| ||| |||||||| |||||||||| |||||||||||||| |||||    
T  3006888 ttcatatttcttaagaaaagttgttagtataattaatatgtctattttatgtgttaatattactaaatt 3006820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 450
Target Start/End: Complemental strand, 10396377 - 10396261
Alignment:
Q  333 atatactccctccgtcctttaatgtagccattcattgc-cttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaat 431  Q
    ||||||||||||||||| ||| ||||  ||  |||| |  ||||||||||| |||||||| ||||||| |||||||||  ||| | ||||||||||||||    
T  10396377 atatactccctccgtcccttattgtatgcacccatttcatttttcacatttattaagaaaagttgtcaatgtaattaa--tgtttgttttgtgtgttaat 10396280  T
Q  432 attaccaaattgtcctttg 450  Q
    ||||| |||||||| ||||    
T  10396279 attacgaaattgtcatttg 10396261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 1769556 - 1769478
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| |||||||||||| ||||||||||||||||     |||||| |||||||||||||| |||||| ||||    
T  1769556 ttttcacattttttaagaaatgttatcagtgtaattaatgtactccttttgtatgttaatattaccacattgtcatttg 1769478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 37600997 - 37600927
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    ||||||||||| |||||||||||||| ||| ||||||||||||||  ||| |||||||||| | |||||||    
T  37600997 ttttcacattttttaagaaatgttgtaagtataattaatgtgtctgatttatgtgttaatactgccaaatt 37600927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 1177264 - 1177192
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtc 445  Q
    ||||||||||| |||||||| ||| | |||||||||||||||||| |||||| | |||||||||| ||||||||    
T  1177264 ttttcacattttttaagaaaagttat-agtgtaattaatgtgtctgttttgtatattaatattacgaaattgtc 1177192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 41541550 - 41541623
Alignment:
Q  376 cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    ||||||||||||||||  | || |||  || ||||||||||||||||||||| ||||||| |||||||||||||    
T  41541550 cacatttcttaagaaaaatagttagtacaactaatgtgtctattttgtgtgtcaatattatcaaattgtccttt 41541623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 436
Target Start/End: Complemental strand, 45283891 - 45283827
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattac 436  Q
    |||||| |||||||||||||  || ||| |||||||||||||||| |||| ||||||||||||||    
T  45283891 ttttcaaatttcttaagaaaaattatcaatgtaattaatgtgtctgttttatgtgttaatattac 45283827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 444
Target Start/End: Original strand, 27194061 - 27194099
Alignment:
Q  406 ttaatgtgtctattttgtgtgttaatattaccaaattgt 444  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  27194061 ttaatgtgtttattttgtgtgttaatattaccaaattgt 27194099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 40602150 - 40602072
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| || ||||| ||| | |||| |||||||||||||  ||| |||||||||||||| ||||| |||||||    
T  40602150 ttttcacattttttcagaaaagttattagtgcaattaatgtgtcttatttatgtgttaatattactaaattatcctttg 40602072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 43191586 - 43191508
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| |||||||||||||||   ||| | | || |||||||||||||||| |||||||||||||| |||||||| ||||    
T  43191586 tttttacatttcttaagaaaaaatgttaatttagttaatgtgtctattttatgtgttaatattactaaattgtcatttg 43191508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 445
Target Start/End: Complemental strand, 35709183 - 35709135
Alignment:
Q  397 tcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtc 445  Q
    |||||||| |||||||||||| ||| ||||||||||||| |||||||||    
T  35709183 tcagtgtagttaatgtgtctagtttatgtgttaatattatcaaattgtc 35709135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 450
Target Start/End: Original strand, 34157951 - 34157992
Alignment:
Q  409 atgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||| |||||||||||||| |||||||| ||||    
T  34157951 atgtgtctattttatgtgttaatattactaaattgtcatttg 34157992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 410 - 450
Target Start/End: Original strand, 35794777 - 35794817
Alignment:
Q  410 tgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||| ||||||||| ||||||||| ||||    
T  35794777 tgtgtctattttgtgtattaatattatcaaattgtcatttg 35794817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 6e-35; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 30476000 - 30476115
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||||||| ||||||||| ||  ||||||||||| ||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  30476000 tactccctccgtcccttaatgtaggcacccattgcctttttcacattttttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatatt 30476099  T
Q  435 accaaattgtcctttg 450  Q
    || |||||||||||||    
T  30476100 acgaaattgtcctttg 30476115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 351 - 450
Target Start/End: Original strand, 40645648 - 40645748
Alignment:
Q  351 ttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    ||||||||| ||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  40645648 ttaatgtaggcatccattgcctttttcacatttcttaagaaatgttgtctgtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtctttt 40645747  T
Q  450 g 450  Q
    |    
T  40645748 g 40645748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 351 - 449
Target Start/End: Complemental strand, 41727370 - 41727271
Alignment:
Q  351 ttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    ||||||||||||| ||||||||||| |||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  41727370 ttaatgtagccatccattgcctttttcacatttcttaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacaaaattgtccttt 41727271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 333 - 450
Target Start/End: Complemental strand, 43187243 - 43187125
Alignment:
Q  333 atatactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaat 431  Q
    ||||||||||||||||| ||||||||| || |||||||||||| || ||||||||| ||| ||||||| |||||||||||||||| |||||||| |||||    
T  43187243 atatactccctccgtccgttaatgtagtcactcattgcctttttcatatttcttaaaaaaagttgtcaatgtaattaatgtgtctgttttgtgtattaat 43187144  T
Q  432 attaccaaattgtcctttg 450  Q
    ||||| |||||||||||||    
T  43187143 attacgaaattgtcctttg 43187125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 46435840 - 46435762
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  46435840 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtcctttg 46435762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 335 - 445
Target Start/End: Complemental strand, 29676887 - 29676776
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    ||||||||||||||| ||||||||| ||  ||||||||||| || |||||||||||||  |||||||||||||||||||||||||||| |||||||||||    
T  29676887 atactccctccgtcccttaatgtaggcacccattgcctttttcatatttcttaagaaaaattgtcagtgtaattaatgtgtctattttatgtgttaatat 29676788  T
Q  434 taccaaattgtc 445  Q
    ||| ||||||||    
T  29676787 tacgaaattgtc 29676776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 333 - 450
Target Start/End: Complemental strand, 27638227 - 27638109
Alignment:
Q  333 atatactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaat 431  Q
    ||||||| ||||||||||||||| ||| ||| |||| |||||| |||||||||||||||| ||| | |||||||||||||| ||||||||||||||||||    
T  27638227 atatactgcctccgtcctttaatataggcatccattacctttttcacatttcttaagaaaagttattagtgtaattaatgtctctattttgtgtgttaat 27638128  T
Q  432 attaccaaattgtcctttg 450  Q
    ||||  |||||||||||||    
T  27638127 attataaaattgtcctttg 27638109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 372 - 449
Target Start/End: Complemental strand, 26517325 - 26517248
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  26517325 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttctgtgttaatattaccaaattgtccttt 26517248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 335 - 439
Target Start/End: Complemental strand, 41308924 - 41308819
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    ||||||| ||||| ||||||||||| |||| |  ||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  41308924 atactccatccgttctttaatgtaggcatttacggcctttttcacatttcttaaaaaatgttgtcagtgtaattaatgtgtctgttttgtgtgttaatat 41308825  T
Q  434 taccaa 439  Q
    ||||||    
T  41308824 taccaa 41308819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 46048480 - 46048596
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt--cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    |||||||||||  | ||||||||| || |||| |||||||  |||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||    
T  46048480 tactccctccgctccttaatgtaggcactcatcgccttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtattaatat 46048579  T
Q  434 taccaaattgtcctttg 450  Q
    ||| |||||||||||||    
T  46048580 tacgaaattgtcctttg 46048596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 332 - 450
Target Start/End: Complemental strand, 12077894 - 12077775
Alignment:
Q  332 aatatactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaa 430  Q
    |||||||| | ||||||| ||||||||| ||  |||||| |||| || ||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  12077894 aatatacttcatccgtcccttaatgtaggcacccattgcatttttcaaatttcttaagaaaagttgtcagtgtaattaatgtgtctcttttgtgtgttaa 12077795  T
Q  431 tattaccaaattgtcctttg 450  Q
    |||||| |||||||| ||||    
T  12077794 tattacaaaattgtcatttg 12077775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 372 - 444
Target Start/End: Complemental strand, 14645999 - 14645927
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgt 444  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14645999 ttttcacattttttaagaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgt 14645927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 367 - 442
Target Start/End: Complemental strand, 41825252 - 41825177
Alignment:
Q  367 ttgccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41825252 ttgcattttcacacttcttaagaaaagttgtcagtgtaattaatgtgtctattttatgtgttaatattaccaaatt 41825177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 20945410 - 20945332
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| |||| |||||||    
T  20945410 ttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctattttatgtgttaatattacctaattatcctttg 20945332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 26121328 - 26121406
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| ||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  26121328 tttttacatttcttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattatcaaattgtcctttg 26121406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 31531535 - 31531457
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||| ||||||||| ||||    
T  31531535 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttgatattatcaaattgtcttttg 31531457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 372 - 444
Target Start/End: Original strand, 11388117 - 11388189
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgt 444  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  11388117 ttttcacatttcttaagaaaaattgttagtgtaattaatgtgtctattttgcgtgttaatattaccaaattgt 11388189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 367 - 450
Target Start/End: Complemental strand, 27047293 - 27047210
Alignment:
Q  367 ttgccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| |||||||||| ||||||||| | ||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  27047293 ttgcattttcacattccttaagaaaagctgttagtgcaattaatgtgtctattttgtgtgttaatattaccaaattgtcttttg 27047210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 13084468 - 13084398
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  13084468 ttttcatatttcttaagaaaagttgtcagtataattaatgtgtctgttttgtgtgttaatattaccaaatt 13084398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 26043015 - 26043093
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| |||||||||||||||  ||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  26043015 tttttacatttcttaagaaaaattgtcagtgtaattaatatgtctgttttgtgtgttaatgttaccaaattgtcctttg 26043093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 31819402 - 31819480
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||| || ||||||||||||||||| |||| |||||||||||||| |||||||||||||    
T  31819402 ttttcacatttcttaagaaaagttatcggtgtaattaatgtgtctgttttatgtgttaatattacgaaattgtcctttg 31819480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 42891415 - 42891493
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| ||| |||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  42891415 ttttcacatttcttaagaaaagttgttagtataattaatttgtctgttttgtgtgttaatattaccaaactgtcctttg 42891493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 52325613 - 52325535
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||   ||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  52325613 ttttcacatttcttaagaaaaaatgttagtgtaattaatgtgtctattttatgtgttaatattatcaaattgtcctttg 52325535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 26998853 - 26998969
Alignment:
Q  336 tactccctccgtcc-tttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    |||||||||||||| ||||||||||  || ||||  ||||| |||||||||||||||| ||||||| | |||||||||| |||||||||| |||||||||    
T  26998853 tactccctccgtccctttaatgtaggtatccattatctttttcacatttcttaagaaaagttgtcattataattaatgtatctattttgtttgttaatat 26998952  T
Q  434 taccaaattgtcctttg 450  Q
    ||| |||||||| ||||    
T  26998953 tacgaaattgtcttttg 26998969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 449
Target Start/End: Original strand, 50092626 - 50092741
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgccttttc-acatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    ||||||||||||||| ||||||||  |||  ||||||||||  ||||||||||| ||| |||| |||||||||||||||||   |||||||| |||||||    
T  50092626 atactccctccgtcccttaatgtaagcatctattgccttttttacatttcttaacaaaagttgacagtgtaattaatgtgttggttttgtgtattaatat 50092725  T
Q  434 taccaaattgtccttt 449  Q
    ||| ||||||||||||    
T  50092726 tacaaaattgtccttt 50092741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 11344554 - 11344624
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||||| |||||||||||    
T  11344554 ttttcacatttcttaagaaaagttattggtgtaattaatgtgtctattttgtgtgttaacattaccaaatt 11344624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 25750523 - 25750601
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| ||||||||||||||| ||||| | |||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  25750523 tttttacatttcttaagaaaggttgttaatgtaattaatttgtctattttgtgtgttaatattaccaacttgttctttg 25750601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 29645354 - 29645432
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| |||||||||||||| |||||||||||||| ||| |||| |||||||||||||| |||||||| ||||    
T  29645354 ttttcacatttattaagaaatgttgttagtgtaattaatgtatctgttttatgtgttaatattacgaaattgtcatttg 29645432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 33287862 - 33287940
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| |||   |||||||||||| ||||||||||||||||||||||||  |||||||||||||    
T  33287862 ttttcacatttcttaagaaaagtttgtagtgtaattaatttgtctattttgtgtgttaatattattaaattgtcctttg 33287940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 42010864 - 42010934
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    ||||||||||||||||||||  |||| | ||||||||||||||||||||||||||||||||||| ||||||    
T  42010864 ttttcacatttcttaagaaaatttgttaatgtaattaatgtgtctattttgtgtgttaatattatcaaatt 42010934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 50525086 - 50525008
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| | | || | ||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  50525086 ttttcacatttcttaagaaaagctctcggggtaattaatatgtatattttgtgtgttaatattaccaaattgtcctttg 50525008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 11393918 - 11393991
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtc 445  Q
    ||||||||||| |||| ||| ||||| |||||||||||||||||||||||||||||||||| || |||||||||    
T  11393918 ttttcacattttttaaaaaaagttgttagtgtaattaatgtgtctattttgtgtgttaatactatcaaattgtc 11393991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 376 - 448
Target Start/End: Complemental strand, 35765752 - 35765680
Alignment:
Q  376 cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctt 448  Q
    |||||||||||||||| ||| |||||||||||||| ||||| |||||||| ||||||||||||||||| ||||    
T  35765752 cacatttcttaagaaaagttatcagtgtaattaatatgtctgttttgtgtattaatattaccaaattgacctt 35765680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 387 - 442
Target Start/End: Original strand, 29611845 - 29611900
Alignment:
Q  387 agaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  29611845 agaaatgttgttagtgtaattaatgtgtctattttgtgtgttaatattatcaaatt 29611900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 387 - 450
Target Start/End: Complemental strand, 39617345 - 39617282
Alignment:
Q  387 agaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||| |||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||    
T  39617345 agaaaagttgtcagtgtaattaatgtgtctgttttgtatgttaatattacgaaattgtcctttg 39617282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 372 - 455
Target Start/End: Original strand, 44338078 - 44338160
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgcttct 455  Q
    ||||||||||| |||||||| ||||| |||||| ||||| |||||| ||| |||||||||||||||||||||||||||| ||||    
T  44338078 ttttcacattttttaagaaaagttgttagtgtagttaat-tgtctaatttttgtgttaatattaccaaattgtcctttgtttct 44338160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 831470 - 831392
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||| ||||||||||||| ||||||| |||||||||||||  | | ||| |||||||||||||||||||||||||||    
T  831470 ttttcatatttcttaagaaaagttgtcaatgtaattaatgtgcatgtattgcgtgttaatattaccaaattgtcctttg 831392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 22659576 - 22659646
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||| ||||||||||||||| ||||| ||| |||||||||| | |||||||||||||||||||||||||||    
T  22659576 tttttacatttcttaagaaaagttgttagtataattaatgtatttattttgtgtgttaatattaccaaatt 22659646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 50363023 - 50363101
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| ||||||||  ||||||||||||||||| ||||| |||| ||| ||||||||||||||||||| ||||    
T  50363023 ttttcacattttttaagaaaaattgtcagtgtaattaatatgtctgttttatgtattaatattaccaaattgtcatttg 50363101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 51263078 - 51263156
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||| |||  |||| |||||||||||||||||| |||| ||||||| |||||| |||||||||||||    
T  51263078 ttttcacatttcttaaaaaaaattgttagtgtaattaatgtgtctgttttatgtgttagtattactaaattgtcctttg 51263156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 41543717 - 41543644
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtc 445  Q
    |||||||||||||||| ||| |||||| ||||| ||||||||||||||||||||| ||||||||  ||||||||    
T  41543717 ttttcacatttcttaaaaaaagttgtctgtgtatttaatgtgtctattttgtgtgataatattataaaattgtc 41543644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 450
Target Start/End: Original strand, 28477395 - 28477459
Alignment:
Q  386 aagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||| |||||| ||| ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  28477395 aagaaaagttgtcggtgcaattaatgtgtctgttttgtgtgttaatattaccaaattgtcttttg 28477459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 33412071 - 33412011
Alignment:
Q  384 ttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgt 444  Q
    ||||||||  |||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  33412071 ttaagaaaaattgttagtgcaattaatgtgtctattttgtgtgttaatattaccaaattgt 33412011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 334 - 412
Target Start/End: Complemental strand, 5504691 - 5504612
Alignment:
Q  334 tatactccctccgtcctttaatgtagccattc-attgccttttcacatttcttaagaaatgttgtcagtgtaattaatgt 412  Q
    ||||||||||| |||| ||||||||| ||  |  || |||||||||||||||||||||||||||||||||||||||||||    
T  5504691 tatactccctcggtcccttaatgtaggcacccgtttcccttttcacatttcttaagaaatgttgtcagtgtaattaatgt 5504612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 374 - 433
Target Start/End: Original strand, 23157093 - 23157152
Alignment:
Q  374 ttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    ||||||||||||||||||  ||||||||||||||||||||||| ||||||| ||||||||    
T  23157093 ttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctgttttgtgagttaatat 23157152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 406 - 453
Target Start/End: Original strand, 35055816 - 35055863
Alignment:
Q  406 ttaatgtgtctattttgtgtgttaatattaccaaattgtcctttgctt 453  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  35055816 ttaatgtgtctattttgtgtgttaatattaccaaattgtcatttgctt 35055863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 372 - 435
Target Start/End: Complemental strand, 37729139 - 37729076
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatta 435  Q
    ||||||||||||||||||||  |||| | | |||||||||||||||||||||||||||||||||    
T  37729139 ttttcacatttcttaagaaaaattgttaatataattaatgtgtctattttgtgtgttaatatta 37729076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 11140701 - 11140779
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||  |||||||| ||| ||||||||| |||||||| | |||||||||||| |||||||||||| |||||||    
T  11140701 ttttcacattgtttaagaaaagttatcagtgtaaataatgtgtatgttttgtgtgttagtattaccaaattatcctttg 11140779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 41740051 - 41740005
Alignment:
Q  404 aattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  41740051 aattaatgtgtctattttgtgtgttaatattaccaaattatcctttg 41740005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 430
Target Start/End: Complemental strand, 53717636 - 53717578
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaa 430  Q
    |||| |||||||||||||||| |||||| |||||||||||||||| |||||||||||||    
T  53717636 tttttacatttcttaagaaatattgtcaatgtaattaatgtgtctgttttgtgtgttaa 53717578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 54426066 - 54425988
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||   | ||| |||| || |||||||| |||||||||||||||||||||||||||| ||||    
T  54426066 ttttcacatttcttaagaaaaaatatcaatgtagttgatgtgtctgttttgtgtgttaatattaccaaattgtcatttg 54425988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 405 - 450
Target Start/End: Original strand, 21932955 - 21933000
Alignment:
Q  405 attaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  21932955 attaatgtgtctattttgtgtgttaatattaccaaattatcctttg 21933000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 34055972 - 34055899
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtc 445  Q
    |||||||||||||||| |||  |||||| |||||||||| ||||| ||||||||||||||||||  ||||||||    
T  34055972 ttttcacatttcttaaaaaaaattgtcaatgtaattaatatgtctgttttgtgtgttaatattatgaaattgtc 34055899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 374 - 450
Target Start/End: Original strand, 48309443 - 48309518
Alignment:
Q  374 ttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||| |||||||||||| ||||| |||| ||||| |||||||||||||| |||||||||||| ||||| |||||||    
T  48309443 ttcacgtttcttaagaaaagttgttagtgcaatta-tgtgtctattttgtatgttaatattacaaaattatcctttg 48309518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 374 - 450
Target Start/End: Complemental strand, 48901625 - 48901549
Alignment:
Q  374 ttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||| ||||||||  | || |||| ||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  48901625 ttcacatttattaagaaaaatagttagtgcaattaatttgtctattttgtgtgttaatattactaaattgtcatttg 48901549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 374 - 450
Target Start/End: Complemental strand, 48903191 - 48903115
Alignment:
Q  374 ttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||| ||||||||  | || |||| ||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  48903191 ttcacatttattaagaaaaatagttagtgcaattaatttgtctattttgtgtgttaatattactaaattgtcatttg 48903115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 44083622 - 44083693
Alignment:
Q  372 ttttcacatttctt-aagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    ||||||||||| || ||||||  |||| | |||||||||||| |||||||||||||||||||||||||||||    
T  44083622 ttttcacatttttttaagaaaaattgttattgtaattaatgtatctattttgtgtgttaatattaccaaatt 44083693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 54556034 - 54555964
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||| ||||||||| ||||| ||| |||||||||||| |||||||||| | ||||||| ||||||||||    
T  54556034 ttttcatatttcttaataaatgctgttagtgtaattaatatgtctattttatatgttaattttaccaaatt 54555964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 21864295 - 21864367
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtc 445  Q
    ||||||||||||| ||||||  ||| ||||| ||||| |||||||||||| |||| ||||||||||||||||||    
T  21864295 ttttcacatttctcaagaaaaattgacagtgcaatta-tgtgtctattttatgtgctaatattaccaaattgtc 21864367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 31650775 - 31650702
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtc 445  Q
    ||||||||||| |||| |||  |||| | || |||||||||||||||||| |||| ||||||||||||||||||    
T  31650775 ttttcacatttattaaaaaaaattgttaatgcaattaatgtgtctattttatgtggtaatattaccaaattgtc 31650702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 450
Target Start/End: Original strand, 28243785 - 28243833
Alignment:
Q  402 gtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||| |||||||||||||||||| | ||||||||||||||    
T  28243785 gtaattaatgtgtttattttgtgtgttaatataatcaaattgtcctttg 28243833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 26243468 - 26243546
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| |||||| |||| ||| |||||||||||||||||| ||| | |||||||||||||| |||  |||||||| ||||    
T  26243468 tttttacattttttaaaaaaggttgtcagtgtaattaatatgtttgttttgtgtgttaatgttattaaattgtcatttg 26243546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 416
Target Start/End: Original strand, 35145236 - 35145280
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtct 416  Q
    |||||||||||||||||||| ||||| ||||||||||| ||||||    
T  35145236 ttttcacatttcttaagaaaagttgtgagtgtaattaacgtgtct 35145280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 429
Target Start/End: Original strand, 23068032 - 23068086
Alignment:
Q  374 ttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgtta 429  Q
    ||||||||| ||||||||  |||| | |||||||||||||||||||||||||||||    
T  23068032 ttcacattt-ttaagaaaaattgttattgtaattaatgtgtctattttgtgtgtta 23068086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 437
Target Start/End: Original strand, 48213653 - 48213686
Alignment:
Q  404 aattaatgtgtctattttgtgtgttaatattacc 437  Q
    ||||||||||| ||||||||||||||||||||||    
T  48213653 aattaatgtgtttattttgtgtgttaatattacc 48213686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 449
Target Start/End: Original strand, 48581314 - 48581391
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    |||||||||||||||| ||| ||| |   |||| ||||||||| |||||||||| ||||||||| |||| | ||||||    
T  48581314 ttttcacatttcttaaaaaaagttattgatgtagttaatgtgtttattttgtgtattaatattaacaaactatccttt 48581391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 425
Target Start/End: Original strand, 49000448 - 49000501
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgt 425  Q
    ||||||||||| |||||||| |||||   || ||||||||||||||||||||||    
T  49000448 ttttcacattttttaagaaaagttgttgatgcaattaatgtgtctattttgtgt 49000501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 333 - 450
Target Start/End: Original strand, 36116278 - 36116396
Alignment:
Q  333 atatactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaat 431  Q
    |||||||| |||||||| ||||||||| ||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||    
T  36116278 atatactctctccgtcccttaatgtaggcattcattgtctttttcacatttcttaagaaatgttgtcggtgtaattaatgtgtctgttttatgtgttaat 36116377  T
Q  432 attaccaaattgtcctttg 450  Q
    ||||| |||||||| ||||    
T  36116378 attacgaaattgtcatttg 36116396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 1324668 - 1324783
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    ||||||||| |||| |||||||| ||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||    
T  1324668 tactccctctgtcccttaatgtatccactcattgcctttttcacatttcttaagaaatgttatcagtgtaattaatgtgtctgttttgtgtgttaatctt 1324767  T
Q  435 accaaattgtcctttg 450  Q
    | ||||||||| ||||    
T  1324768 atcaaattgtcatttg 1324783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 332 - 442
Target Start/End: Complemental strand, 4089649 - 4089538
Alignment:
Q  332 aatatactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaa 430  Q
    |||||||||||||| ||| ||||||||| ||| ||||| ||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  4089649 aatatactccctccttcccttaatgtaggcatccattgactttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaa 4089550  T
Q  431 tattaccaaatt 442  Q
    |||||| |||||    
T  4089549 tattacgaaatt 4089538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 335 - 450
Target Start/End: Complemental strand, 36726319 - 36726203
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    ||||| ||||||||| ||||||||| ||| ||||||||||| | ||| |||||||| ||||||| |||||||||||||||| | ||||||||||||||||    
T  36726319 atacttcctccgtcccttaatgtaggcatccattgcctttttcgcatctcttaagagatgttgttagtgtaattaatgtgtttgttttgtgtgttaatat 36726220  T
Q  434 taccaaattgtcctttg 450  Q
    |||||||||||||||||    
T  36726219 taccaaattgtcctttg 36726203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 48767524 - 48767639
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||| ||||| ||||||||| ||  |||||| |||| |||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||    
T  48767524 tactccctacgtcccttaatgtaggcacccattgcttttttcacatttcttaaaaaacgttgtcagtgtaattaatgtgtctgttttgtgtgttaatatt 48767623  T
Q  435 accaaattgtcctttg 450  Q
    || |||||||||||||    
T  48767624 acgaaattgtcctttg 48767639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 20123447 - 20123525
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  20123447 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattatcaaattgtcctttg 20123525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 335 - 450
Target Start/End: Original strand, 49100630 - 49100746
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    |||||||||| |||| ||||||||||||  ||||||||||| | ||| |||||| | | |||||||||||||||||||||||| |||| |||||||||||    
T  49100630 atactccctctgtcccttaatgtagccacccattgcctttttcgcatctcttaaaataagttgtcagtgtaattaatgtgtctgttttatgtgttaatat 49100729  T
Q  434 taccaaattgtcctttg 450  Q
    ||| |||||||||||||    
T  49100730 tacgaaattgtcctttg 49100746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 2276685 - 2276607
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||| ||| |||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||    
T  2276685 ttttcacatttcttaacaaaagttgtcagtgtagttaatttgtctgttttgtgtgttaatattaccaaattgtcctttg 2276607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 21388239 - 21388317
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||  ||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  21388239 ttttcacatttcttaagaaaatttgtcggtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcctttg 21388317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 25750365 - 25750443
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||    
T  25750365 ttttcacatttcttaaaaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattacaaaattgtcatttg 25750443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 37048032 - 37048110
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||| || |||||||||||||||    
T  37048032 ttttcacatttcttaagaaaagttatcagtgtaattaatgtgtctgttttgtgtgttaatgttcccaaattgtcctttg 37048110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 37673734 - 37673812
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||  |||||||| ||||    
T  37673734 ttttcacatttcttaagaaatgttgtgagtgtaattaatgtgtctgttttgtgtgttaatattatgaaattgtcttttg 37673812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 48193612 - 48193690
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| ||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  48193612 ttttcacattttttaagaaaaattgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcctttg 48193690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 10685044 - 10685160
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt--cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    |||||||||| ||  ||||||||| || |||||| |||||  || ||||||||||||| ||| |||||||||||||||||||| |||| |||||||||||    
T  10685044 tactccctccatctcttaatgtaggcactcattgtcttttttcatatttcttaagaaaagttatcagtgtaattaatgtgtctgttttatgtgttaatat 10685143  T
Q  434 taccaaattgtcctttg 450  Q
    ||| |||||||||||||    
T  10685144 tacgaaattgtcctttg 10685160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 339 - 450
Target Start/End: Complemental strand, 43465286 - 43465173
Alignment:
Q  339 tccctccgtcctttaatgtagccattcattgcctttt-cacatttctt-aagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattac 436  Q
    ||||||||||||||||||||| |||||||| |||||| || |||| || ||||| ||||||||||||||||||||||||| |||||||||||| ||||      
T  43465286 tccctccgtcctttaatgtagtcattcattacctttttcatatttttttaagaagtgttgtcagtgtaattaatgtgtctgttttgtgtgttagtatttt 43465187  T
Q  437 caaattgtcctttg 450  Q
    ||||||||| ||||    
T  43465186 caaattgtcttttg 43465173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 21809755 - 21809677
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||||  |||||||||||||||| |||| |||||||||||||| |||||||||||||    
T  21809755 ttttcacatttcttaagaaaagttgtcgatgtaattaatgtgtctgttttttgtgttaatattactaaattgtcctttg 21809677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 27213484 - 27213562
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| |||| || |||| ||||||||||||||||||||||||| |||||||||||||    
T  27213484 ttttcacatttcttaagaaaagttgttagtgcaactaatatgtctattttgtgtgttaatattactaaattgtcctttg 27213562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 31373806 - 31373728
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||  |||| || | ||||||||||||||||||||||||||||||||| |||||||||||||    
T  31373806 ttttcacatttcttaagaaaaattgttagggcaattaatgtgtctattttgtgtgttaatattactaaattgtcctttg 31373728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 37491727 - 37491649
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| |||| |||||||||||||||||| | |||||||||||||||||| |||||||    
T  37491727 ttttcacatttcttaagaaaagttgttagtgcaattaatgtgtctattttatatgttaatattaccaaattatcctttg 37491649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 40740947 - 40741017
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||||||||||||||||| ||||| | |||||||||| |||||||||||||||||||||||||||||||    
T  40740947 ttttcacatttcttaagaaaagttgttaatgtaattaatatgtctattttgtgtgttaatattaccaaatt 40741017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 21801164 - 21801091
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtc 445  Q
    |||||||||||||||||||| ||||||  |||||||||||||||| ||||||||||||||||||| ||||||||    
T  21801164 ttttcacatttcttaagaaaagttgtcgatgtaattaatgtgtctgttttgtgtgttaatattactaaattgtc 21801091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 450
Target Start/End: Complemental strand, 48610282 - 48610166
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    ||||||||||  ||| |||||||||| ||  ||||| |||| ||||||| |||||||| ||||||| |||||||||||||||| |||||||| |||||||    
T  48610282 atactccctctctcccttaatgtagctatctattgcatttttcacattttttaagaaaagttgtcactgtaattaatgtgtctgttttgtgtattaatat 48610183  T
Q  434 taccaaattgtcctttg 450  Q
    ||| |||||||| ||||    
T  48610182 tacgaaattgtcttttg 48610166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 376 - 443
Target Start/End: Complemental strand, 29636144 - 29636077
Alignment:
Q  376 cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattg 443  Q
    ||||||| |||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  29636144 cacattttttaagaaaagttgtcaatgtaattaatgtgtctgttttgtgtgttaatattaccaaattg 29636077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 6376241 - 6376163
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||  |||| |||||||||||||| ||| ||||||||||||||||||| |||||||| ||||    
T  6376241 ttttcacatttcttaagaaaaattgttagtgtaattaatgtctctgttttgtgtgttaatattactaaattgtcatttg 6376163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 18122150 - 18122072
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||| |||| |||||||||||||| ||||| |||||||    
T  18122150 ttttcacatttcttaagaaaagttgtgagtgtaattagtgtgtctgttttatgtgttaatattactaaattttcctttg 18122072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 46783949 - 46783871
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||| | |||| ||||||||||||||| || ||||||||||||||||||||||| ||||    
T  46783949 ttttcacatttcttaagaaaagttattagtgaaattaatgtgtctatcttatgtgttaatattaccaaattgtcttttg 46783871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 35128383 - 35128459
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||  ||||||| |||||||||||||||||| ||||| ||||||||||||||||||  |||||||||||||    
T  35128383 ttttcacattt--taagaaaagttgtcagtgtaattaatatgtctgttttgtgtgttaatattatgaaattgtcctttg 35128459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 19236175 - 19236097
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||  |||||| |||||||||||||| ||||| |||||    
T  19236175 ttttcacatttcgtaagaaaagttgttagtgtaattaatgtgtcggttttgtatgttaatattaccatattgttctttg 19236097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 33181292 - 33181370
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||| ||||||||| |||||||||||||||| ||||||||| | |||||| | ||||||||||||||||||| ||||    
T  33181292 ttttcatatttcttaaaaaatgttgtcagtgtagttaatgtgtttgttttgtatattaatattaccaaattgtcatttg 33181370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 40263708 - 40263786
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||| |||||  |||||||||||| |||||||| ||||    
T  40263708 ttttcacattttttaagaaaagttgtcggtgtaattaatgtgtctgttttgattgttaatattacaaaattgtcatttg 40263786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 372 - 431
Target Start/End: Complemental strand, 10595205 - 10595146
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaat 431  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||| ||||||||||||||    
T  10595205 ttttcacatttcttaagaaaagttgtcagtataattaatatgtctgttttgtgtgttaat 10595146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 379 - 442
Target Start/End: Original strand, 29992979 - 29993042
Alignment:
Q  379 atttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||| |||||||| |||||||||    
T  29992979 atttcttaagaaaagttgttagtgcaattaatgtgtctattttgtatgttaatactaccaaatt 29993042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 23876034 - 23876112
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||| ||| ||||| |||||| ||||| |||| ||||| |||||||||||||| |||||||| ||||    
T  23876034 ttttcacatttcttaaaaaaagttgttagtgtagttaatatgtccattttatgtgttaatattactaaattgtcttttg 23876112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 26632843 - 26632913
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    ||||||||||| ||||||||  |||| |||||| |||||||||||||||| |||||||||||||| |||||    
T  26632843 ttttcacattttttaagaaaaattgttagtgtagttaatgtgtctattttatgtgttaatattactaaatt 26632913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 28663753 - 28663822
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||||||||||||||||| ||||| | |  |||||||||||||||||||||||||||||||| ||||||    
T  28663753 ttttcacatttcttaagaaa-gttgttaatacaattaatgtgtctattttgtgtgttaatattatcaaatt 28663822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 40211385 - 40211312
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtc 445  Q
    |||||| |||| ||||||||  ||||  ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  40211385 ttttcatattttttaagaaaaattgtttgtgtaattaatgtgtctgttttgtgtgttaatattacgaaattgtc 40211312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 27163010 - 27162934
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||| || ||||| |||| ||||||||||  |||||||||| |||||||| |||||||||| ||||    
T  27163010 ttttcacatttcttaagtaaagttgttagtgcaattaatgtg--tattttgtgttttaatattgccaaattgtcatttg 27162934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 376 - 442
Target Start/End: Original strand, 21752529 - 21752595
Alignment:
Q  376 cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||||||||| ||| ||||| |||| ||||||| ||| ||||||||| |||||||||||||||||    
T  21752529 cacatttcttaaaaaaagttgttagtgcaattaatttgtttattttgtgggttaatattaccaaatt 21752595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 26201076 - 26201006
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||| ||||||||||||| ||| | |||| ||||| |||||||||||||||| ||||||||| ||||||    
T  26201076 ttttcatatttcttaagaaaagttattagtgcaattattgtgtctattttgtgtattaatattatcaaatt 26201006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 385 - 450
Target Start/End: Complemental strand, 41672662 - 41672597
Alignment:
Q  385 taagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||  |||| ||||||||||||||||||||||||||||| ||||| || ||||| |||||||    
T  41672662 taagaaaacttgttagtgtaattaatgtgtctattttgtgtgtgaatataactaaattatcctttg 41672597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 442
Target Start/End: Complemental strand, 21392979 - 21392931
Alignment:
Q  394 ttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||||||    
T  21392979 ttgttagtgcaattaatgtgtctattttgagtgttaatattaccaaatt 21392931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 372 - 444
Target Start/End: Original strand, 27170009 - 27170080
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgt 444  Q
    |||||||||||||||||| |   ||| |||| ||||||| ||||||||||||||| |||||||||||||||||    
T  27170009 ttttcacatttcttaagacaacatgttagtgcaattaatttgtctattttgtgtg-taatattaccaaattgt 27170080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 20124185 - 20124255
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    ||||||||||| |||||||| |||||  |||||||||||||||||||||| ||| || | ||||| |||||    
T  20124185 ttttcacattttttaagaaaagttgttggtgtaattaatgtgtctattttatgtattgacattactaaatt 20124255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 42993296 - 42993226
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||| ||||||||||||||| ||||| | |  |||||| ||||||||||| ||||||||||||| ||||||    
T  42993296 tttttacatttcttaagaaaagttgttaatacaattaacgtgtctattttatgtgttaatattatcaaatt 42993226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 440
Target Start/End: Complemental strand, 5334491 - 5334435
Alignment:
Q  384 ttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaa 440  Q
    ||||||||  |||| |||||||||||||||| | |||||| ||||||||||||||||    
T  5334491 ttaagaaaaattgttagtgtaattaatgtgtttgttttgtatgttaatattaccaaa 5334435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 19477512 - 19477452
Alignment:
Q  384 ttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgt 444  Q
    |||||||| ||||| ||||||||||||| || |||||| | ||||||| ||||||||||||    
T  19477512 ttaagaaaagttgttagtgtaattaatgcgtttattttatatgttaatgttaccaaattgt 19477452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 450
Target Start/End: Complemental strand, 43601270 - 43601195
Alignment:
Q  374 ttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||| ||||| | ||||||| | |||||| |||||| ||| | |||||| |||||||||||||    
T  43601270 ttcacatttcttaagaaaagttgttaatgtaattgaggtgtctgttttgt-tgtaagtattacaaaattgtcctttg 43601195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 441
Target Start/End: Original strand, 29723421 - 29723527
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattg-ccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtct-attttgtgtgttaatat 433  Q
    |||||||||||||| ||||||||| ||  ||||| | ||||||||||| || |||||  |||||| ||||||||||||| ||  ||||||||| ||||||    
T  29723421 tactccctccgtcccttaatgtaggcacccattgtctttttcacattt-tttagaaaatttgtcattgtaattaatgtgcctgtttttgtgtggtaatat 29723519  T
Q  434 taccaaat 441  Q
    ||| ||||    
T  29723520 tacgaaat 29723527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 436
Target Start/End: Original strand, 36195393 - 36195452
Alignment:
Q  377 acatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattac 436  Q
    ||||||||| |||||  |||| ||| ||||||||||||||||||||||| | ||||||||    
T  36195393 acatttctttagaaaaattgttagtataattaatgtgtctattttgtgtataaatattac 36195452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 442
Target Start/End: Original strand, 25828130 - 25828188
Alignment:
Q  384 ttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||||| ||||| |||  ||||||| || |||||||||||||||||||||| |||||    
T  25828130 ttaagaaaagttgttagtaaaattaatatgcctattttgtgtgttaatattacgaaatt 25828188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 25099053 - 25098972
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtct 416  Q
    |||||||||||||| ||||| || ||   |||||| |||| |||||||||||| |||||||||| ||| | |||||||||||    
T  25099053 tactccctccgtcccttaatataaccccccattgcatttttcacatttcttaaaaaatgttgtctgtgcagttaatgtgtct 25098972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 336 - 444
Target Start/End: Complemental strand, 20262539 - 20262430
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    ||||||||| |||| ||||| ||| || |||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  20262539 tactccctctgtcccttaatatagacactcattgcctttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatatt 20262440  T
Q  435 accaaattgt 444  Q
    || |||||||    
T  20262439 acgaaattgt 20262430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 5448622 - 5448737
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    ||||| |||||||| ||||||||| ||| ||||||||||| |||||||||||||||||||| ||| | |||||||||||||| |||||||||||||||||    
T  5448622 tactcgctccgtcccttaatgtaggcatccattgcctttttcacatttcttaagaaatgttatcaatataattaatgtgtctgttttgtgtgttaatatt 5448721  T
Q  435 accaaattgtcctttg 450  Q
    || ||||| |||||||    
T  5448722 acgaaattatcctttg 5448737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 336 - 442
Target Start/End: Original strand, 16070391 - 16070498
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||||||| ||||||||| ||   |||| ||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  16070391 tactccctccgtcccttaatgtaggcacctattgtctttttcacatttcttaagaaatgctgtcagtgtaattaatgtgtctgttttgtgtgttaatatt 16070490  T
Q  435 accaaatt 442  Q
    ||||||||    
T  16070491 accaaatt 16070498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 335 - 447
Target Start/End: Original strand, 46729265 - 46729377
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    ||||| ||| ||||| ||||||||| ||||||||| ||||| ||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  46729265 atacttccttcgtcccttaatgtagacattcattgtctttttcacattt-ttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatat 46729363  T
Q  434 taccaaattgtcct 447  Q
    ||| ||||||||||    
T  46729364 tacgaaattgtcct 46729377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 25477185 - 25477300
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    ||||||||  |||| ||||||||| ||| |||||| |||| |||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||    
T  25477185 tactccctatgtcccttaatgtaggcatccattgcttttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttatgtgttaatatt 25477284  T
Q  435 accaaattgtcctttg 450  Q
    || |||||||| ||||    
T  25477285 acaaaattgtcatttg 25477300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 50782775 - 50782853
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||    
T  50782775 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtcttaatattacgaaattgtcctttg 50782853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 372 - 449
Target Start/End: Complemental strand, 30153330 - 30153253
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||    
T  30153330 ttttcacatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgataatattaccaaattatccttt 30153253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 374 - 450
Target Start/End: Original strand, 34543701 - 34543777
Alignment:
Q  374 ttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  34543701 ttcacatttcttaagaaaagttgtccgtgtaattaatgtgtctattttgtgtgttaatattaccaaataatcctttg 34543777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 52225979 - 52226094
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattg-ccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    ||||||||||||||||||||||||  |   |||| | ||||||||||| |||||||||||||||||| |||||||||||||| |||| | ||||||||||    
T  52225979 tactccctccgtcctttaatgtaggtacctattgtctttttcacattttttaagaaatgttgtcagtataattaatgtgtctgttttatatgttaatatt 52226078  T
Q  435 accaaattgtcctttg 450  Q
    | ||||||||||||||    
T  52226079 atcaaattgtcctttg 52226094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 12624693 - 12624771
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| ||||||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  12624693 ttttcacatttcttaagaaaagttgttagtgtaattaatgtgactattttatgtgttaatattactaaattgtcctttg 12624771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 14602763 - 14602685
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  14602763 ttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctagtttttgtgttaatattaccaaattgtcatttg 14602685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 29584891 - 29584969
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  29584891 ttttcacatttcttaagaaaaattgttagtgtaattaatgtgtctattctgtgtgttaatattaccaaattgtcatttg 29584969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 31486485 - 31486563
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||| ||||| |||||||    
T  31486485 ttttcacatttcttaagaaaagttgttagtgcaattaatgtgtctattttgtgtgttaatattactaaattatcctttg 31486563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 37175129 - 37175052
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37175129 ttttcacatttcttaagaaaagttgtt-gtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcttttg 37175052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 38136352 - 38136430
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  38136352 ttttcacatttcttaagaaaatttgttagtgtaattaatgtgtctattttgtgtgttaatattatcaaattgtcatttg 38136430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 39237697 - 39237619
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  39237697 ttttcacattttttaagaaaagttgtcagtgtaattaatgtatctgttttgtgtgttaatattacgaaattgtcctttg 39237619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 336 - 441
Target Start/End: Original strand, 51787731 - 51787837
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||||| | ||||||||| || ||||| | |||| |||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||    
T  51787731 tactccctccgttccttaatgtaggcactcattccatttttcacatttcttaagaaaagttgtcggtgtaattaatgtgtctgttttgtgtgttaatatt 51787830  T
Q  435 accaaat 441  Q
    || ||||    
T  51787831 acgaaat 51787837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 346 - 449
Target Start/End: Complemental strand, 48472631 - 48472526
Alignment:
Q  346 gtcctttaatgtagccattcattgcctttt-cacatttctt-aagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattg 443  Q
    |||| ||||||||| ||| ||||| ||||| ||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||     
T  48472631 gtcccttaatgtaggcatccattgtctttttcacatttttttaagaaaagttgtcagtgtaattaatgtgtctattttgtgtgttaatattacgaaatta 48472532  T
Q  444 tccttt 449  Q
    ||||||    
T  48472531 tccttt 48472526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 336 - 450
Target Start/End: Complemental strand, 22750987 - 22750872
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgc-cttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||||||| ||||||||  |  || ||||  |||||||||||||||||||| |||||| ||||||||||||| ||| |||||||| ||||||||    
T  22750987 tactccctccgtcccttaatgtaatccctctttgcatttttcacatttcttaagaaaagttgtctgtgtaattaatgtatctgttttgtgtattaatatt 22750888  T
Q  435 accaaattgtcctttg 450  Q
    ||||||||||| ||||    
T  22750887 accaaattgtcatttg 22750872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 3094179 - 3094257
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| ||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3094179 ttttgacatttcttaagaaaagttgttaaagtaattaatgtgtctattttgtgtgttaatattaccaaattgtcatttg 3094257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 37625233 - 37625163
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||| |||||    
T  37625233 ttttcacatttcttaagaaaagttgtcagtataattaatgtgtttattttgtgtgttaatattactaaatt 37625163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 41920146 - 41920068
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| |||| ||||||| | |||||||||||||||||||||||||||||||| ||||    
T  41920146 ttttcacatttcttaagaaaagttgttagtgcaattaatatttctattttgtgtgttaatattaccaaattgtcttttg 41920068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 56373452 - 56373374
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||  |||| |||| ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  56373452 ttttcacatttcttaagaaaaattgttagtgcaattaatgtgtttattttgtgtgttaatattaccaaattgtcatttg 56373374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 372 - 455
Target Start/End: Complemental strand, 13096649 - 13096567
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgcttct 455  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||| | |||||||||||||||||||||||||| |||| ||||    
T  13096649 ttttcacattt-ttaagaaaagttgttagtgtaattaatgtgtctgtgttgtgtgttaatattaccaaattgtcatttgtttct 13096567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 5932884 - 5932961
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| |||||||| |||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||    
T  5932884 ttttcacattt-ttaagaaaagttgtcagtgtaattaatgtgtttgttttgtgtgttaatattatcaaattgtcatttg 5932961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 28116613 - 28116543
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    ||||||||||| |||||||| ||||| |||||||||||| ||||||||||||||||||||||| |||||||    
T  28116613 ttttcacattttttaagaaaagttgttagtgtaattaatatgtctattttgtgtgttaatattgccaaatt 28116543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 376 - 450
Target Start/End: Complemental strand, 33246601 - 33246527
Alignment:
Q  376 cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||| |||||||| ||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  33246601 cacattttttaagaaaagttgttagtgtaattaaaatgtctattttgtgtgttaatattaccaaattatcctttg 33246527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 52198836 - 52198766
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| || ||||| ||||||||||||||||    
T  52198836 ttttcacatttcttaagaaaagttgtcagtgtaattaatatgtctgttctgtgtattaatattaccaaatt 52198766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 372 - 453
Target Start/End: Original strand, 24072764 - 24072845
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgctt 453  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||| |||| |||||||||||||  |||||||| |||||||    
T  24072764 tttttacatttcttaagaaaagttgtcaatgtaattaatgtgtctgttttttgtgttaatattatgaaattgtcatttgctt 24072845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 442
Target Start/End: Original strand, 32236795 - 32236898
Alignment:
Q  340 ccctccgtcctttaatgtagccattcattgcctt-ttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattacca 438  Q
    ||||| |||| ||||| ||||||  |||||| || |||| |||| || |||||||||||||||||||||||| ||||| |||||||||||||||||| ||    
T  32236795 ccctcagtcccttaatatagccacccattgctttattcatatttttttagaaatgttgtcagtgtaattaatatgtctgttttgtgtgttaatattatca 32236894  T
Q  439 aatt 442  Q
    ||||    
T  32236895 aatt 32236898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 450
Target Start/End: Complemental strand, 52552656 - 52552541
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcc-ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||| ||||||| ||||||||| ||  || |||| ||||||| ||| |||||||| |||||||||||||| ||| |||||  ||| ||||||||||||    
T  52552656 tactccatccgtcccttaatgtaggcacccaatgcccttttcacgttttttaagaaaagttgtcagtgtaataaatttgtctgctttatgtgttaatatt 52552557  T
Q  435 accaaattgtcctttg 450  Q
    |||||||| |||||||    
T  52552556 accaaattatcctttg 52552541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 5536494 - 5536564
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| ||||| ||||||||| ||| |||||    
T  5536494 ttttcacatttcttaagaaaaattgtcagtgtaattaatgtgtctgttttgcgtgttaatactacgaaatt 5536564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 19654425 - 19654495
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    ||||||||||||||||||||   ||| ||||||||||||||||||||||| |||||| |||||||||||||    
T  19654425 ttttcacatttcttaagaaaaactgttagtgtaattaatgtgtctattttatgtgttgatattaccaaatt 19654495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 20291337 - 20291407
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||||||||||||||||| ||||  | |||||||||||||||||||||||| ||||||||||| |||||    
T  20291337 ttttcacatttcttaagaaaagttggtaatgtaattaatgtgtctattttgtgggttaatattactaaatt 20291407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 22651461 - 22651539
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||  || | | |||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  22651461 ttttcacatttcttaagaaaatttattaatgtaattaatgtgtttattttgtatgttaatattaccaaattgtcttttg 22651539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 43509080 - 43509156
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||| ||||||||| ||||    
T  43509080 ttttcacatttcttaagaaacgttgtc-gtgtaattaatgtgt-tgttttgtgtgttaatattatcaaattgtcttttg 43509156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 43800758 - 43800883
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtg----------taattaatgtgtctattttgtg 424  Q
    |||||||||||||| |||| |||| ||  ||||||||||| ||||||| |||||||||||| ||||||          ||||||| |||||| |||||||    
T  43800758 tactccctccgtcccttaacgtaggcacccattgcctttttcacatttgttaagaaatgttctcagtgtaattaagtgtaattaaggtgtctgttttgtg 43800857  T
Q  425 tgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||||||||    
T  43800858 tgttaatattaccaaattgtcctttg 43800883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 372 - 449
Target Start/End: Original strand, 54438507 - 54438584
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    ||||||||||||||||||||  ||||| || ||||||| |||||| ||||||||||||||||||| ||||| ||||||    
T  54438507 ttttcacatttcttaagaaaaattgtccgtataattaaagtgtctgttttgtgtgttaatattacgaaattatccttt 54438584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 373 - 444
Target Start/End: Complemental strand, 5416974 - 5416905
Alignment:
Q  373 tttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgt 444  Q
    ||||||||||||||||||| |||||  |||||  ||||||||||||||||| ||||||||||||||||||||    
T  5416974 tttcacatttcttaagaaaagttgtttgtgta--taatgtgtctattttgtttgttaatattaccaaattgt 5416905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 372 - 435
Target Start/End: Complemental strand, 3684296 - 3684233
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatta 435  Q
    ||||||||||| ||||||||  ||||| |||||||||||||||||||||||||| |||||||||    
T  3684296 ttttcacatttattaagaaagattgtcggtgtaattaatgtgtctattttgtgtattaatatta 3684233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 10602315 - 10602236
Alignment:
Q  372 ttttcacatt-tcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||| | |||||||| ||||  |||||||||||| ||||||||||||||||||||||||| |||||||| ||||    
T  10602315 ttttcacattcttttaagaaaagttggtagtgtaattaatttgtctattttgtgtgttaatattactaaattgtcttttg 10602236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 372 - 443
Target Start/End: Complemental strand, 20185764 - 20185693
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattg 443  Q
    ||||||||||||||||||||  |||| |||||||||||||||    ||||||||||||||||||||||||||    
T  20185764 ttttcacatttcttaagaaaatttgttagtgtaattaatgtgcaagttttgtgtgttaatattaccaaattg 20185693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 41945880 - 41945803
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| ||||||||  ||||||||||||||||||||| | |||| |||| ||||||||| |||||||||||||    
T  41945880 ttttcacattttttaagaaaaattgtcagtgtaattaatgtgt-tgttttatgtgataatattacgaaattgtcctttg 41945803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 449
Target Start/End: Complemental strand, 45628183 - 45628105
Alignment:
Q  372 ttttcacatttctt-aagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    ||||||||||| || |||||| ||||| ||||||||| |||||||| |||||||| ||||||||||||||||| |||||    
T  45628183 ttttcacatttttttaagaaaagttgttagtgtaattgatgtgtctgttttgtgtattaatattaccaaattgcccttt 45628105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 20016522 - 20016598
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| |||||||| || || |||| |||||||||  ||||||||| |||||||||||||||||| |||||||    
T  20016522 ttttcacattttttaagaaaggtagttagtgcaattaatgt--ctattttgtatgttaatattaccaaattttcctttg 20016598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 377 - 436
Target Start/End: Original strand, 20791929 - 20791988
Alignment:
Q  377 acatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattac 436  Q
    ||||||||||||||| ||||  |||| ||||||| |||||||||||||||||||||||||    
T  20791929 acatttcttaagaaaagttggtagtgcaattaatatgtctattttgtgtgttaatattac 20791988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 31840095 - 31840171
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||| |||||||||||||  |||| |||||||||||||| | |  ||||||||||||||||||||||||||| ||||    
T  31840095 ttttcaaatttcttaagaaaaattgttagtgtaattaatgtattt--tttgtgtgttaatattaccaaattgtcatttg 31840171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 450
Target Start/End: Complemental strand, 31937485 - 31937422
Alignment:
Q  387 agaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||| ||||||| |||||||||||||||| ||||||||||||||||||  |||||||| ||||    
T  31937485 agaaaagttgtcactgtaattaatgtgtctgttttgtgtgttaatattattaaattgtcatttg 31937422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 10541365 - 10541287
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| |||||||| |||||| ||||| | || ||||||||| | |||||||||| |||||||||||||||| |||||||    
T  10541365 tttttacatttctaaagaaaagttgttaatgcaattaatgtatatattttgtgtattaatattaccaaattatcctttg 10541287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 39414233 - 39414303
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||| ||||||||||||| ||||  | || ||||||| |||||||||||||||||||||||| ||||||    
T  39414233 ttttcatatttcttaagaaaagttgataatgcaattaatatgtctattttgtgtgttaatattatcaaatt 39414303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 45079919 - 45079849
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||||||||||||||||| || || |||| ||||||  | |||||||||||||||||||||| ||||||    
T  45079919 ttttcacatttcttaagaaaagtagttagtgcaattaacatatctattttgtgtgttaatattagcaaatt 45079849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 445
Target Start/End: Original strand, 26203131 - 26203200
Alignment:
Q  376 cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtc 445  Q
    ||||||| |||||||| ||||| | |||||||||||| | |||||| |||||||||||||| ||||||||    
T  26203131 cacatttattaagaaaagttgttactgtaattaatgtatatattttatgtgttaatattacaaaattgtc 26203200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 370 - 450
Target Start/End: Complemental strand, 39197145 - 39197064
Alignment:
Q  370 ccttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtcta-ttttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||| |||||||||||||||  |||||| | | ||||||||||||  |||||||||||||||||| ||||||||| ||||    
T  39197145 cctttttacatttcttaagaaaaattgtcactatgattaatgtgtcttgttttgtgtgttaatattatcaaattgtcttttg 39197064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 7002179 - 7002258
Alignment:
Q  372 ttttcacatttctt-aagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||| ||||||  |||| | || ||||||||| | |||||| |||||||||||||||||||| |||||||    
T  7002179 ttttcacatttctttaagaaaaattgttaatgcaattaatgtttatattttatgtgttaatattaccaaattatcctttg 7002258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 379 - 450
Target Start/End: Complemental strand, 18683634 - 18683563
Alignment:
Q  379 atttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||| ||| ||||| | |  ||||||||||| ||||||||| |||||||||||||| ||||||||||    
T  18683634 atttcttaaaaaaagttgttaatacaattaatgtgtttattttgtgcgttaatattaccaacttgtcctttg 18683563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 381 - 432
Target Start/End: Original strand, 54359690 - 54359741
Alignment:
Q  381 ttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaata 432  Q
    ||||||||||| ||||||||| |||||||||||||| |||| ||||||||||    
T  54359690 ttcttaagaaaagttgtcagtataattaatgtgtctgttttatgtgttaata 54359741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 410
Target Start/End: Original strand, 20293740 - 20293778
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaat 410  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  20293740 ttttcacatttcttaagaaaagttgtcagtgtaattaat 20293778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 442
Target Start/End: Complemental strand, 51918728 - 51918690
Alignment:
Q  404 aattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  51918728 aattaatgtgtctattttgtgtgttagtattaccaaatt 51918690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 425
Target Start/End: Original strand, 30049428 - 30049481
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgt 425  Q
    ||||||||||| |||||||| ||  | |||||||||||||||||||||||||||    
T  30049428 ttttcacattttttaagaaaagtgattagtgtaattaatgtgtctattttgtgt 30049481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 335 - 409
Target Start/End: Complemental strand, 40411752 - 40411676
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgcctttt--cacatttcttaagaaatgttgtcagtgtaattaa 409  Q
    ||||||||||||||| ||||||||||||   ||||  ||||  |||||||||||||||| ||||||||| |||||||    
T  40411752 atactccctccgtcccttaatgtagccacatattgttttttttcacatttcttaagaaaagttgtcagtataattaa 40411676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 429
Target Start/End: Complemental strand, 54701395 - 54701338
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgtta 429  Q
    ||||||||||| |||||||| |||||||||||||||||| ||| | ||| ||||||||    
T  54701395 ttttcacattttttaagaaaagttgtcagtgtaattaatatgtttgtttagtgtgtta 54701338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 416
Target Start/End: Complemental strand, 50438945 - 50438901
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtct 416  Q
    ||||||||||||||||||||||||||| ||| | |||||||||||    
T  50438945 ttttcacatttcttaagaaatgttgtctgtgcagttaatgtgtct 50438901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 20116449 - 20116525
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||| |||| |||||||| ||||||| |||||||||  || || ||||||||||||||||||  |||||||| ||||    
T  20116449 ttttcatatttattaagaaaagttgtcaatgtaattaa--tgcctgttttgtgtgttaatattaggaaattgtcatttg 20116525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 443
Target Start/End: Original strand, 42169222 - 42169281
Alignment:
Q  384 ttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattg 443  Q
    |||| ||| |||| ||||||||||||||||| |||||||||||| ||| |||| ||||||    
T  42169222 ttaaaaaaagttgacagtgtaattaatgtgtatattttgtgtgtgaatgttactaaattg 42169281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 450
Target Start/End: Original strand, 5168004 - 5168054
Alignment:
Q  400 gtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| ||||| ||||||| ||||||||||| |||||||| ||||    
T  5168004 gtgtaattaatatgtctgttttgtgcgttaatattactaaattgtcatttg 5168054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 26186863 - 26186785
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||| ||   |||| |||| ||||||  | | |||||||||||||||||||| ||||||||| ||||    
T  26186863 ttttcacatttcttaataataattgttagtgcaattaagatatttattttgtgtgttaatattatcaaattgtcatttg 26186785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 413
Target Start/End: Original strand, 32866504 - 32866542
Alignment:
Q  375 tcacatttcttaagaaatgttgtcagtgtaattaatgtg 413  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  32866504 tcacatttcttaagaaaagttgtcggtgtaattaatgtg 32866542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 407 - 445
Target Start/End: Complemental strand, 52768972 - 52768934
Alignment:
Q  407 taatgtgtctattttgtgtgttaatattaccaaattgtc 445  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  52768972 taatgtgtctattttgtgtgtgaatattacaaaattgtc 52768934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 444
Target Start/End: Original strand, 23928356 - 23928401
Alignment:
Q  399 agtgtaattaatgtgtctattttgtgtgttaatattaccaaattgt 444  Q
    |||| ||||||||||| ||||||| ||||||||||||| |||||||    
T  23928356 agtgcaattaatgtgtttattttgcgtgttaatattactaaattgt 23928401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 407
Target Start/End: Original strand, 3113362 - 3113406
Alignment:
Q  364 tcattgcctttt-cacatttcttaagaaatgttgtcagtgtaatt 407  Q
    |||||||||||| |||||||||||| |||| ||||||||||||||    
T  3113362 tcattgcctttttcacatttcttaataaatattgtcagtgtaatt 3113406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 336 - 449
Target Start/End: Original strand, 5895691 - 5895805
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||||||| ||||||||| ||| ||||| ||||| |||||||||||||||| ||||| | |||||||||||||||| |||||||| ||||||||    
T  5895691 tactccctccgtcccttaatgtaggcatccattgtctttttcacatttcttaagaaaagttgttaatgtaattaatgtgtctgttttgtgtattaatatt 5895790  T
Q  435 accaaattgtccttt 449  Q
    || ||||||||||||    
T  5895791 acgaaattgtccttt 5895805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 1763810 - 1763888
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  1763810 ttttcatatttcttaagaaaagttgtcagtgtaattaatgtgtctgttttgtgtgttaatattactaaattgtcctttg 1763888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 31946021 - 31945943
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31946021 ttttcacatttcttaagaaaatttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcgtttg 31945943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 336 - 449
Target Start/End: Complemental strand, 4250804 - 4250690
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgccttttc-acatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    ||||||||| |||| |||||||||  ||| |||| |||||  |||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||    
T  4250804 tactccctctgtcccttaatgtaggtatttattgtcttttttacatttcttaagaaaaattgtcagtgtaattaatgtgtctgttttgtgtgttaatatt 4250705  T
Q  435 accaaattgtccttt 449  Q
    || || |||||||||    
T  4250704 acgaagttgtccttt 4250690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 16327120 - 16327198
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||||| | |||||||||||||| |||||||||||||||||||||||||||| ||||    
T  16327120 ttttcacatttcttaagaaaagttgtcaatataattaatgtgtctgttttgtgtgttaatattaccaaattgtcatttg 16327198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 19838928 - 19839006
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| |||||| |||||||||||||||| |||||||||||||| |||||||||||||    
T  19838928 ttttcacatttcttaagaaaagttgttagtgtagttaatgtgtctattttatgtgttaatattactaaattgtcctttg 19839006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 15981791 - 15981864
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtc 445  Q
    |||||||||||||||||||| |||||  ||||||||||||||||| ||||||||||||||||||||||||||||    
T  15981791 ttttcacatttcttaagaaaagttgttggtgtaattaatgtgtctgttttgtgtgttaatattaccaaattgtc 15981864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 3729386 - 3729464
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| |||||||||||||||  ||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3729386 tttttacatttcttaagaaaaattgttggtgtaattaatgtgtctattttgtgtgttaatattaccaaattgttctttg 3729464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 11302852 - 11302930
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| ||| |||||||||||||| |||| |||||||||||||| |||||||||||||    
T  11302852 ttttcacatttcttaagaaaagttgttagtataattaatgtgtctgttttttgtgttaatattacaaaattgtcctttg 11302930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 16350518 - 16350596
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||| |||| ||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||    
T  16350518 ttttcacattttttaataaaagttgtcagtgtaattaatgagtctgttttgtgtgttaatattaccaaattgtcatttg 16350596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 22410952 - 22410879
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtc 445  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| |||| | |||||||||||||||||||||    
T  22410952 ttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctgttttttatgttaatattaccaaattgtc 22410879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 335 - 442
Target Start/End: Original strand, 9461253 - 9461360
Alignment:
Q  335 atactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatat 433  Q
    ||||||||||||||| ||| |||||  |||||||| ||||| ||||||| ||||||||||||||| ||||||||||||||| | |||| |||||||||||    
T  9461253 atactccctccgtccctta-tgtagaaattcattgtctttttcacatttattaagaaatgttgtcggtgtaattaatgtgtttgttttatgtgttaatat 9461351  T
Q  434 taccaaatt 442  Q
    ||| |||||    
T  9461352 tactaaatt 9461360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 336 - 450
Target Start/End: Complemental strand, 5084687 - 5084568
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattg-ccttttcacatttcttaagaaatgttgtcagtgtaatt----aatgtgtctattttgtgtgttaa 430  Q
    |||| ||||||| ||||||| ||| |||  |||| |||||||||||||||||||||| ||||| |||||||||    ||||||| | |||||||||||||    
T  5084687 tacttcctccgtactttaatataggcatctattgtccttttcacatttcttaagaaaagttgttagtgtaattaataaatgtgtttgttttgtgtgttaa 5084588  T
Q  431 tattaccaaattgtcctttg 450  Q
    ||||| ||||||||||||||    
T  5084587 tattatcaaattgtcctttg 5084568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 12514694 - 12514616
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||| | ||||||||  |||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  12514694 ttttcacatattttaagaaaaattgttagtgcaattaatgtgtctattttgtgtgttaatattaccaaattgtcttttg 12514616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 3888051 - 3887979
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtc 445  Q
    |||||||||||||||||||| ||||| | || | |||||||||||||||||||||||||||||| |||||||||    
T  3888051 ttttcacatttcttaagaaaagttgttattgcagttaatgtgtctattttgtgtgttaatatta-caaattgtc 3887979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 438
Target Start/End: Complemental strand, 28238422 - 28238357
Alignment:
Q  373 tttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattacca 438  Q
    ||||||||||||||| |||  |||| ||| ||||||||||||||||||||||||||||||||||||    
T  28238422 tttcacatttcttaataaaaattgttagtataattaatgtgtctattttgtgtgttaatattacca 28238357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 374 - 443
Target Start/End: Original strand, 30248563 - 30248631
Alignment:
Q  374 ttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattg 443  Q
    |||||||||||||||||| ||||| |||||| ||||||||| | ||||||||||||||||||||||||||    
T  30248563 ttcacatttcttaagaaaagttgtaagtgta-ttaatgtgtttgttttgtgtgttaatattaccaaattg 30248631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 450
Target Start/End: Complemental strand, 10669361 - 10669305
Alignment:
Q  394 ttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  10669361 ttgttagtgcaattaatgtgtctattttgtgtgttaatattaccaaattgttctttg 10669305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 11081893 - 11081971
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||| |||||||||| ||||| |||||||||||| | |||||||| ||| ||||| |||||||||| |||||||    
T  11081893 ttttcacatatcttaagaaaagttgttagtgtaattaatatatctattttctgtattaatgttaccaaattatcctttg 11081971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 30466077 - 30466007
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||| ||||||||||| ||| |||||| ||||||||||| ||| | |||||||||||||||||||||||||    
T  30466077 tttttacatttcttaacaaaagttgtcggtgtaattaatatgtttgttttgtgtgttaatattaccaaatt 30466007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 374 - 450
Target Start/End: Complemental strand, 197558 - 197482
Alignment:
Q  374 ttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||| ||| ||||| |||||||||||| | |||||||||| |||||||  |||||||| ||||    
T  197558 ttcacatttcttaagaaaagttatcagtataattaatgtgtttgttttgtgtgtcaatattattaaattgtcatttg 197482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 6791375 - 6791451
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||| ||| ||||||| |||||||||||||  | ||||||||||||||||||  |||||||| ||||    
T  6791375 ttttcacatttcttaaaaaaagttgtcaatgtaattaatgtg--tgttttgtgtgttaatattattaaattgtcatttg 6791451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 442
Target Start/End: Original strand, 20522976 - 20523039
Alignment:
Q  379 atttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    ||||||||||||||||||| |||| |||||||| || || ||||||||| ||||||||||||||    
T  20522976 atttcttaagaaatgttgttagtgcaattaatgagtttagtttgtgtgtcaatattaccaaatt 20523039  T

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Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 9428164 - 9428234
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    ||||||| |||||||||||| ||||  | | |||||||||| |||||||||||||||||||||| ||||||    
T  9428164 ttttcacgtttcttaagaaaagttgctactataattaatgtatctattttgtgtgttaatattatcaaatt 9428234  T

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Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 333 - 446
Target Start/End: Original strand, 16186530 - 16186643
Alignment:
Q  333 atatactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaat 431  Q
    |||| |||||||| ||| ||||||||||||  ||||  ||||| |||||||  ||||||| ||| | |||||||||||||||||| |||||| |||||||    
T  16186530 atatcctccctccatcccttaatgtagccacccattatctttttcacattttgtaagaaaagttattagtgtaattaatgtgtctgttttgtatgttaat 16186629  T
Q  432 attaccaaattgtcc 446  Q
     |||| |||||||||    
T  16186630 -ttacgaaattgtcc 16186643  T

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Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 442
Target Start/End: Original strand, 31536009 - 31536079
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||| ||||||||||||||| ||||| |||||||||||| | |||||||| | ||||||||||| ||||||    
T  31536009 tttttacatttcttaagaaaagttgttagtgtaattaatatatctattttatttgttaatattatcaaatt 31536079  T

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Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 31780121 - 31780199
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||| ||||||||| ||| ||||  | || |||||||||||||||||||| |||| ||||||| |||||||||||||    
T  31780121 ttttcatatttcttaataaaagttgataatgcaattaatgtgtctattttgtatgttgatattactaaattgtcctttg 31780199  T

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Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 34513327 - 34513249
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| |||||| ||||||||  |||||||  ||| |||||||||| ||||||||||||||||||| ||||| |||||||    
T  34513327 tttttacattttttaagaaaatttgtcagcataaataatgtgtctgttttgtgtgttaatattacgaaattatcctttg 34513249  T

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Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 1514336 - 1514267
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||| |||| |||||||| ||||| |||| ||||||| ||| |||||||| ||||||||||||||||||    
T  1514336 ttttcatattttttaagaaa-gttgttagtgcaattaatatgtttattttgtatgttaatattaccaaatt 1514267  T

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Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 450
Target Start/End: Original strand, 33607384 - 33607430
Alignment:
Q  404 aattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||||    
T  33607384 aattaatgtgtctatttagtgtgttaatattatcaaattatcctttg 33607430  T

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Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 336 - 416
Target Start/End: Complemental strand, 3308055 - 3307974
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtct 416  Q
    |||||||||| ||| ||||| || || |||||||| |||| ||||||||||||||||| ||||| ||| | |||||||||||    
T  3308055 tactccctccctcccttaatataacctttcattgcatttttcacatttcttaagaaatattgtctgtgcagttaatgtgtct 3307974  T

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Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 435
Target Start/End: Complemental strand, 31487466 - 31487407
Alignment:
Q  376 cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatta 435  Q
    |||||||||| | ||| ||||| ||  |||||||||||| ||||||||||||||||||||    
T  31487466 cacatttcttgaaaaaagttgttagcataattaatgtgtatattttgtgtgttaatatta 31487407  T

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Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 442
Target Start/End: Complemental strand, 12514832 - 12514794
Alignment:
Q  404 aattaatgtgtctattttgtgtgttaatattaccaaatt 442  Q
    |||||||||||| ||||||| ||||||||||||||||||    
T  12514832 aattaatgtgtccattttgtatgttaatattaccaaatt 12514794  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 416
Target Start/End: Original strand, 27441775 - 27441819
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtct 416  Q
    ||||||||||| ||||||||||||||| ||| | |||||||||||    
T  27441775 ttttcacatttattaagaaatgttgtctgtgcagttaatgtgtct 27441819  T

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Target: scaffold1091 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 2021 - 1943
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2021 ttttcacatttcttaagataagttgttagtgtaattaatgtgtctattttgtgtgttaatattaccaaattatcctttg 1943  T

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Target: scaffold0005 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 214615 - 214693
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  214615 ttttcacatttcttaagaaaagttgttagtgtaattaatgtgtctagtttttgtgttaatattaccaaattgtcatttg 214693  T

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Target: scaffold0038 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 438
Target Start/End: Complemental strand, 38584 - 38519
Alignment:
Q  373 tttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattacca 438  Q
    ||||||||||||||| |||  |||| ||| ||||||||||||||||||||||||||||||||||||    
T  38584 tttcacatttcttaataaaaattgttagtataattaatgtgtctattttgtgtgttaatattacca 38519  T

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Target: scaffold0182 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 336 - 450
Target Start/End: Original strand, 22025 - 22135
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgcctttt-cacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatatt 434  Q
    |||||||||||||| ||||||||| ||   |||| ||||| |||||||     |||||||| |||||||||||||||||| | |||||||| ||||||||    
T  22025 tactccctccgtcccttaatgtaggcacatattgtctttttcacattt-----gaaatgttatcagtgtaattaatgtgtttgttttgtgtattaatatt 22119  T
Q  435 accaaattgtcctttg 450  Q
    |||| |||||||||||    
T  22120 accatattgtcctttg 22135  T

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Target: scaffold0182; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 455
Target Start/End: Original strand, 18695 - 18769
Alignment:
Q  381 ttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttgcttct 455  Q
    ||||||| ||| ||||| | || ||||||| ||| ||||||||| |||||||||||||||||||| |||| ||||    
T  18695 ttcttaaaaaaagttgttaatgcaattaatttgtttattttgtgggttaatattaccaaattgtcatttgtttct 18769  T

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Target: scaffold0176 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 19529 - 19605
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    ||||||||||||||| |||| |||||||||| ||||||| |||||||||  |||| ||||||||||||||| |||||||    
T  19529 ttttcacatttcttacgaaaagttgtcagtgcaattaatatgtctattt--tgtgctaatattaccaaattatcctttg 19605  T

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Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 372 - 450
Target Start/End: Complemental strand, 99925 - 99847
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||| |||| |||||||| ||||| |||| || | |||||||||||||||||||||||||||| |||||||| ||||    
T  99925 ttttcatatttgttaagaaaagttgttagtgcaacttatgtgtctattttgtgtgttaatattacgaaattgtcttttg 99847  T

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Target: scaffold0121 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 336 - 392
Target Start/End: Original strand, 24095 - 24152
Alignment:
Q  336 tactccctccgtcctttaatgtagccattcattgc-cttttcacatttcttaagaaat 392  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  24095 tactccctccgtcctttaatgtaggcattcattgcatttttcacatttcttaagaaat 24152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 450
Target Start/End: Original strand, 49133 - 49211
Alignment:
Q  372 ttttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||| |||||||||||||||  |||| | |||||||||| |||||| |||||||||||||||||  |||||||| ||||    
T  49133 tttttacatttcttaagaaaaattgttaatgtaattaatatgtctactttgtgtgttaatattattaaattgtcatttg 49211  T

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Target: scaffold0013; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 449
Target Start/End: Complemental strand, 61361 - 61313
Alignment:
Q  401 tgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    ||||||||| |||| | ||||||||||||||||||  ||||||||||||    
T  61361 tgtaattaacgtgtttgttttgtgtgttaatattattaaattgtccttt 61313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0699 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0699
Description:

Target: scaffold0699; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 450
Target Start/End: Original strand, 7577 - 7652
Alignment:
Q  374 ttcacatttcttaagaaatgttgtcagtgtaattaatgtgtctattttgtgtgttaatattaccaaattgtcctttg 450  Q
    |||||||||||||||||| ||||| | ||||||| | ||||||||||||| ||| | |||||| |||||||||||||    
T  7577 ttcacatttcttaagaaaagttgttaatgtaattgaggtgtctattttgt-tgtaagtattacaaaattgtcctttg 7652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 449
Target Start/End: Complemental strand, 23729 - 23681
Alignment:
Q  401 tgtaattaatgtgtctattttgtgtgttaatattaccaaattgtccttt 449  Q
    |||||||||||||| |||||||| ||||||||||| |||||||| ||||    
T  23729 tgtaattaatgtgtttattttgtatgttaatattatcaaattgttcttt 23681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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