View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17814_low_44 (Length: 207)
Name: NF17814_low_44
Description: NF17814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17814_low_44 |
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Alignment Details
Target: chr4 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 13 - 190
Target Start/End: Original strand, 20824650 - 20824824
Alignment:
| Q |
13 |
tatatcatcccttcaacatcatgttcatcattcttcatcacttgtttcccaaacccataaaatattcaccatcatccttcatcacttgtatgggaagaat |
112 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
20824650 |
tatatcatcccttcaacatcatgttcatcattcttcatcacttgtttcccaaacccataaaatattcaccatc---cttcatcacttgtatgggaagaat |
20824746 |
T |
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| Q |
113 |
ccaatttgtttctactctctcctcaaactcgaatgcaattttgatcactccccaaattctccttgtgttatcgctaac |
190 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20824747 |
ccaatttgtttctactctctcctcaaactcgaatgcaattttgatcactccccaaattctccttgtgttatcgctaac |
20824824 |
T |
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