View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17817_low_30 (Length: 245)
Name: NF17817_low_30
Description: NF17817
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17817_low_30 |
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Alignment Details
Target: chr8 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 44540679 - 44540818
Alignment:
| Q |
12 |
atggggtttgcaaaatgaaacaaaattggcactataaaatctcaacatagtatagatctgaaaggaatggaatcatttttaccgtttgataaaagggttt |
111 |
Q |
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| T |
44540679 |
atggggtttgcaaaatgaaacaaaattggcactataaaatctcaacatagtatagatctgaaaggaatggaatcattttcaccgtttgataaaagggttt |
44540778 |
T |
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| Q |
112 |
atttttagtttaaggaaagtgggtcataattaaatgaagt |
151 |
Q |
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| T |
44540779 |
atttttagtttaaggaaagtggatcataattaaatgaagt |
44540818 |
T |
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