View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17817_low_40 (Length: 221)
Name: NF17817_low_40
Description: NF17817
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17817_low_40 |
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Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 20403181 - 20403369
Alignment:
| Q |
18 |
acatacctcatacacaatggccatcaattaaattttctcgttctgcatcttctgttttttagtataaggtataaaagttcaaagtcaagtcaaatatgaa |
117 |
Q |
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| T |
20403181 |
acatacctcatacacaatggccatcaattaaattttctcgttctgcatcttctgttttttagtataaggtataaaagttcaaagtcaagtcaaatatgga |
20403280 |
T |
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| Q |
118 |
aattcaaaattggcacattgataaagaatgaaaacaataacctcaaaaaacgtttcggtacaattgaacattgtgacaatttgatcttc |
206 |
Q |
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| T |
20403281 |
aattcaaaattggcacattgataaagaatgaaaacaataacctcaaaaaacgtttcggtacaattgaacattgtgacaatttgatcttc |
20403369 |
T |
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