View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17821_high_8 (Length: 416)

Name: NF17821_high_8
Description: NF17821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17821_high_8
NF17821_high_8
[»] chr1 (51 HSPs)
chr1 (129-398)||(9164734-9165006)
chr1 (16-129)||(40054882-40054995)
chr1 (16-128)||(43916346-43916458)
chr1 (16-128)||(1845073-1845185)
chr1 (22-130)||(38207527-38207635)
chr1 (16-128)||(45650302-45650414)
chr1 (16-130)||(7435809-7435922)
chr1 (16-128)||(44808699-44808811)
chr1 (16-100)||(51991826-51991910)
chr1 (16-124)||(44979167-44979276)
chr1 (16-129)||(51004789-51004903)
chr1 (16-124)||(43146717-43146823)
chr1 (16-124)||(26423845-26423953)
chr1 (16-104)||(24452032-24452120)
chr1 (16-130)||(49982454-49982568)
chr1 (16-75)||(24593915-24593974)
chr1 (30-130)||(23539940-23540040)
chr1 (25-128)||(32912211-32912314)
chr1 (16-98)||(51161408-51161490)
chr1 (24-129)||(12838072-12838177)
chr1 (25-128)||(36735512-36735616)
chr1 (16-128)||(40868134-40868245)
chr1 (16-132)||(9587937-9588054)
chr1 (40-130)||(17203067-17203155)
chr1 (81-128)||(29877702-29877749)
chr1 (80-130)||(38261162-38261211)
chr1 (83-128)||(25702435-25702479)
chr1 (16-126)||(34038163-34038274)
chr1 (16-104)||(41541501-41541590)
chr1 (40-129)||(41568763-41568851)
chr1 (16-129)||(12105159-12105273)
chr1 (30-129)||(24511887-24511986)
chr1 (325-393)||(34704472-34704540)
chr1 (81-128)||(4156140-4156187)
chr1 (77-128)||(13202936-13202986)
chr1 (40-123)||(35533878-35533960)
chr1 (16-71)||(38862456-38862511)
chr1 (337-395)||(28915469-28915526)
chr1 (16-96)||(41550178-41550260)
chr1 (40-133)||(24677548-24677640)
chr1 (77-130)||(25081756-25081808)
chr1 (77-130)||(44264013-44264065)
chr1 (80-129)||(46707343-46707391)
chr1 (16-121)||(46918678-46918781)
chr1 (83-128)||(47458889-47458934)
chr1 (77-130)||(52345597-52345649)
chr1 (87-135)||(10574700-10574748)
chr1 (83-123)||(23582133-23582173)
chr1 (40-128)||(39084710-39084797)
chr1 (40-128)||(46283092-46283179)
chr1 (80-128)||(50631593-50631641)
[»] chr2 (37 HSPs)
chr2 (16-137)||(41555422-41555543)
chr2 (16-128)||(15362469-15362581)
chr2 (16-128)||(34188829-34188941)
chr2 (16-130)||(40810713-40810827)
chr2 (16-115)||(39089629-39089728)
chr2 (16-129)||(8362400-8362513)
chr2 (16-128)||(34852355-34852467)
chr2 (16-127)||(12002640-12002750)
chr2 (16-125)||(713362-713471)
chr2 (16-124)||(12071449-12071556)
chr2 (16-129)||(25712717-25712830)
chr2 (16-124)||(15426027-15426136)
chr2 (22-130)||(2859357-2859464)
chr2 (16-72)||(38599866-38599922)
chr2 (16-127)||(15334090-15334201)
chr2 (22-128)||(38073106-38073212)
chr2 (16-128)||(25740281-25740393)
chr2 (16-115)||(22622431-22622530)
chr2 (24-130)||(12182861-12182967)
chr2 (16-129)||(33429428-33429540)
chr2 (16-128)||(45690499-45690611)
chr2 (22-128)||(37781866-37781972)
chr2 (22-128)||(42640850-42640956)
chr2 (81-129)||(8333890-8333938)
chr2 (42-102)||(17809063-17809123)
chr2 (40-130)||(28318039-28318128)
chr2 (33-130)||(11088537-11088634)
chr2 (16-129)||(40287705-40287818)
chr2 (83-128)||(5615745-5615790)
chr2 (16-71)||(2283222-2283277)
chr2 (81-128)||(38030557-38030604)
chr2 (80-130)||(7673293-7673342)
chr2 (80-130)||(32602301-32602350)
chr2 (80-130)||(35895309-35895358)
chr2 (327-396)||(7328903-7328972)
chr2 (80-129)||(25331454-25331502)
chr2 (81-129)||(9589474-9589521)
[»] chr7 (41 HSPs)
chr7 (16-129)||(21919687-21919800)
chr7 (16-128)||(5215319-5215431)
chr7 (16-128)||(23182390-23182502)
chr7 (16-128)||(48460251-48460363)
chr7 (16-130)||(29688922-29689037)
chr7 (16-129)||(31743596-31743709)
chr7 (16-122)||(13806655-13806761)
chr7 (13-132)||(32823399-32823517)
chr7 (16-130)||(1343315-1343429)
chr7 (16-125)||(41769289-41769397)
chr7 (16-100)||(17834226-17834310)
chr7 (28-124)||(38859541-38859637)
chr7 (16-74)||(31760282-31760340)
chr7 (30-130)||(9682025-9682125)
chr7 (16-123)||(27800033-27800140)
chr7 (16-130)||(42584056-42584170)
chr7 (42-130)||(38882816-38882904)
chr7 (28-127)||(2089169-2089268)
chr7 (40-130)||(11640613-11640702)
chr7 (22-127)||(31311643-31311749)
chr7 (50-127)||(2682794-2682871)
chr7 (75-127)||(8159639-8159691)
chr7 (30-130)||(27897222-27897321)
chr7 (39-130)||(40856535-40856627)
chr7 (16-128)||(45701031-45701142)
chr7 (22-125)||(8577927-8578030)
chr7 (83-130)||(19345973-19346020)
chr7 (40-115)||(24149086-24149160)
chr7 (331-398)||(44533636-44533703)
chr7 (43-129)||(24204613-24204699)
chr7 (39-129)||(34363613-34363703)
chr7 (16-129)||(26605055-26605169)
chr7 (40-115)||(27427141-27427215)
chr7 (16-63)||(40379036-40379083)
chr7 (83-129)||(27567159-27567205)
chr7 (24-62)||(35925056-35925094)
chr7 (25-62)||(16200448-16200485)
chr7 (40-121)||(45442371-45442451)
chr7 (16-104)||(3228539-3228626)
chr7 (84-128)||(22639367-22639411)
chr7 (40-128)||(49079573-49079660)
[»] chr6 (29 HSPs)
chr6 (16-128)||(1705900-1706012)
chr6 (16-129)||(21294084-21294197)
chr6 (16-128)||(14507915-14508027)
chr6 (34-128)||(2994322-2994416)
chr6 (16-130)||(24249100-24249214)
chr6 (16-128)||(10887809-10887921)
chr6 (16-128)||(19473966-19474078)
chr6 (16-125)||(1371690-1371799)
chr6 (16-125)||(1379438-1379547)
chr6 (16-130)||(7344319-7344433)
chr6 (16-129)||(1339668-1339780)
chr6 (22-71)||(26315750-26315799)
chr6 (67-130)||(10965969-10966032)
chr6 (40-97)||(24159519-24159576)
chr6 (315-398)||(17312269-17312352)
chr6 (324-396)||(9515494-9515566)
chr6 (22-126)||(16893198-16893302)
chr6 (16-129)||(14779197-14779310)
chr6 (40-128)||(14002398-14002485)
chr6 (30-129)||(29023618-29023717)
chr6 (16-130)||(4509724-4509837)
chr6 (83-130)||(6295739-6295786)
chr6 (83-130)||(6302549-6302596)
chr6 (83-122)||(21998975-21999014)
chr6 (40-122)||(229817-229898)
chr6 (80-129)||(23416856-23416904)
chr6 (83-123)||(14872332-14872372)
chr6 (16-129)||(33574646-33574760)
chr6 (16-129)||(33574824-33574938)
[»] chr5 (37 HSPs)
chr5 (22-130)||(39939031-39939139)
chr5 (16-125)||(5140672-5140781)
chr5 (16-129)||(5204616-5204729)
chr5 (16-129)||(23690500-23690613)
chr5 (16-130)||(4429714-4429828)
chr5 (16-129)||(40756540-40756653)
chr5 (16-129)||(19189402-19189515)
chr5 (16-129)||(4367082-4367196)
chr5 (16-124)||(23408547-23408655)
chr5 (16-95)||(18002684-18002763)
chr5 (16-128)||(31588529-31588641)
chr5 (16-126)||(13544093-13544203)
chr5 (81-138)||(5512672-5512729)
chr5 (39-130)||(29996813-29996904)
chr5 (81-128)||(34901657-34901704)
chr5 (25-130)||(7080413-7080519)
chr5 (40-130)||(9499721-9499810)
chr5 (40-128)||(13593281-13593368)
chr5 (30-125)||(36156149-36156244)
chr5 (75-130)||(16432656-16432711)
chr5 (314-389)||(36817189-36817264)
chr5 (47-130)||(39979669-39979752)
chr5 (83-128)||(4039469-4039514)
chr5 (40-128)||(6335710-6335797)
chr5 (30-128)||(17069293-17069391)
chr5 (16-136)||(29960160-29960281)
chr5 (22-129)||(35162611-35162718)
chr5 (40-130)||(2011053-2011142)
chr5 (83-129)||(6260380-6260425)
chr5 (84-130)||(40524082-40524128)
chr5 (30-107)||(41802415-41802493)
chr5 (16-128)||(777148-777260)
chr5 (84-128)||(1368117-1368161)
chr5 (34-62)||(8780341-8780369)
chr5 (30-129)||(13091221-13091320)
chr5 (16-109)||(30753465-30753560)
chr5 (40-128)||(36410226-36410313)
[»] chr3 (50 HSPs)
chr3 (24-128)||(29698322-29698426)
chr3 (16-128)||(43903367-43903479)
chr3 (22-128)||(32121899-32122005)
chr3 (16-124)||(52776453-52776561)
chr3 (16-123)||(8353067-8353174)
chr3 (16-130)||(15298210-15298323)
chr3 (16-129)||(11510716-11510828)
chr3 (16-89)||(49079771-49079844)
chr3 (16-71)||(4393278-4393333)
chr3 (30-131)||(9252161-9252262)
chr3 (40-135)||(20199667-20199761)
chr3 (22-128)||(35375511-35375618)
chr3 (83-130)||(48795437-48795484)
chr3 (26-128)||(31185430-31185531)
chr3 (16-93)||(27102629-27102706)
chr3 (24-137)||(29384985-29385098)
chr3 (22-130)||(5335361-5335469)
chr3 (16-130)||(26409628-26409743)
chr3 (24-126)||(15804564-15804667)
chr3 (81-128)||(38297229-38297276)
chr3 (81-128)||(52058514-52058561)
chr3 (80-130)||(8966290-8966339)
chr3 (16-130)||(36789885-36789998)
chr3 (81-127)||(41982391-41982437)
chr3 (83-125)||(47175830-47175872)
chr3 (40-129)||(4521268-4521356)
chr3 (16-128)||(4817076-4817188)
chr3 (39-128)||(14998147-14998236)
chr3 (17-130)||(25480296-25480409)
chr3 (16-129)||(1129128-1129242)
chr3 (80-128)||(29815487-29815535)
chr3 (16-137)||(44653465-44653586)
chr3 (85-124)||(4393510-4393549)
chr3 (331-398)||(11471873-11471939)
chr3 (77-128)||(39987351-39987401)
chr3 (30-128)||(52024438-52024536)
chr3 (86-124)||(24105154-24105192)
chr3 (40-130)||(24397703-24397792)
chr3 (80-130)||(25834589-25834638)
chr3 (80-130)||(40478117-40478166)
chr3 (77-127)||(54428851-54428900)
chr3 (16-130)||(26456952-26457066)
chr3 (331-396)||(43332181-43332246)
chr3 (40-125)||(51996422-51996507)
chr3 (24-112)||(3732279-3732366)
chr3 (30-62)||(7016233-7016265)
chr3 (86-130)||(37626936-37626980)
chr3 (40-128)||(42622929-42623016)
chr3 (80-128)||(44379414-44379461)
chr3 (80-128)||(53289230-53289277)
[»] scaffold0009 (1 HSPs)
scaffold0009 (16-128)||(214434-214546)
[»] chr4 (55 HSPs)
chr4 (16-128)||(19527018-19527130)
chr4 (16-126)||(39103539-39103649)
chr4 (16-128)||(31975844-31975956)
chr4 (16-120)||(53973464-53973568)
chr4 (16-127)||(12756297-12756408)
chr4 (22-129)||(49286687-49286794)
chr4 (16-130)||(34584180-34584294)
chr4 (16-130)||(34927100-34927214)
chr4 (16-129)||(19595226-19595339)
chr4 (16-104)||(39953609-39953697)
chr4 (16-104)||(43349090-43349178)
chr4 (17-130)||(22077661-22077774)
chr4 (16-128)||(31296530-31296642)
chr4 (28-128)||(4695614-4695714)
chr4 (16-124)||(9579668-9579776)
chr4 (16-124)||(9585363-9585471)
chr4 (16-124)||(52940775-52940883)
chr4 (22-128)||(15060855-15060961)
chr4 (16-130)||(27950256-27950370)
chr4 (22-128)||(32570668-32570774)
chr4 (23-128)||(595296-595401)
chr4 (16-76)||(40438689-40438749)
chr4 (71-129)||(4491205-4491263)
chr4 (22-124)||(25607694-25607796)
chr4 (16-70)||(44956976-44957030)
chr4 (30-130)||(13548403-13548503)
chr4 (16-71)||(18051993-18052048)
chr4 (24-130)||(21424444-21424550)
chr4 (42-128)||(24566367-24566453)
chr4 (24-125)||(30168101-30168202)
chr4 (24-128)||(39412169-39412273)
chr4 (40-128)||(3690830-3690919)
chr4 (81-130)||(22789580-22789629)
chr4 (24-128)||(52323966-52324070)
chr4 (27-105)||(34791902-34791981)
chr4 (24-127)||(45063238-45063341)
chr4 (24-129)||(6806985-6807090)
chr4 (16-53)||(15033718-15033755)
chr4 (81-130)||(21722552-21722601)
chr4 (16-51)||(4491168-4491203)
chr4 (85-124)||(18051778-18051817)
chr4 (325-372)||(31310732-31310779)
chr4 (30-128)||(46663634-46663732)
chr4 (83-130)||(48207439-48207486)
chr4 (40-122)||(5474011-5474092)
chr4 (316-398)||(30534618-30534700)
chr4 (16-96)||(42680629-42680711)
chr4 (83-129)||(50189375-50189420)
chr4 (83-129)||(54178781-54178827)
chr4 (333-398)||(44564243-44564308)
chr4 (49-126)||(56303166-56303242)
chr4 (80-128)||(126937-126984)
chr4 (80-128)||(1857163-1857210)
chr4 (84-116)||(19627950-19627982)
chr4 (84-128)||(29582329-29582372)
[»] chr8 (32 HSPs)
chr8 (16-130)||(38764736-38764850)
chr8 (16-128)||(31893333-31893445)
chr8 (16-104)||(7886171-7886259)
chr8 (16-130)||(42164906-42165019)
chr8 (16-115)||(6804021-6804120)
chr8 (16-122)||(12107490-12107596)
chr8 (16-121)||(27970306-27970410)
chr8 (16-122)||(35754465-35754570)
chr8 (24-129)||(9008036-9008141)
chr8 (31-126)||(30777274-30777369)
chr8 (16-90)||(29107590-29107664)
chr8 (39-127)||(28885999-28886087)
chr8 (16-123)||(12801400-12801507)
chr8 (16-98)||(34047446-34047528)
chr8 (40-129)||(5215321-5215410)
chr8 (81-129)||(32887665-32887713)
chr8 (16-123)||(2879936-2880042)
chr8 (80-131)||(12632901-12632952)
chr8 (81-130)||(23870266-23870315)
chr8 (16-128)||(5273345-5273456)
chr8 (16-129)||(37218896-37219013)
chr8 (24-125)||(463838-463939)
chr8 (16-125)||(39722249-39722358)
chr8 (81-129)||(9508856-9508904)
chr8 (81-128)||(41592-41639)
chr8 (16-128)||(29265589-29265702)
chr8 (83-129)||(34057828-34057874)
chr8 (81-126)||(34520930-34520975)
chr8 (23-126)||(2666809-2666909)
chr8 (40-128)||(5982184-5982271)
chr8 (30-109)||(32238244-32238323)
chr8 (40-128)||(44636921-44637008)
[»] scaffold0131 (1 HSPs)
scaffold0131 (16-128)||(10948-11059)
[»] scaffold0045 (1 HSPs)
scaffold0045 (16-99)||(38276-38359)
[»] scaffold0721 (1 HSPs)
scaffold0721 (22-128)||(6585-6693)
[»] scaffold0271 (1 HSPs)
scaffold0271 (81-128)||(17020-17067)
[»] scaffold0325 (1 HSPs)
scaffold0325 (40-122)||(1220-1301)
[»] scaffold0841 (1 HSPs)
scaffold0841 (31-71)||(3117-3157)
[»] scaffold0923 (1 HSPs)
scaffold0923 (80-128)||(44-91)
[»] scaffold0067 (1 HSPs)
scaffold0067 (82-122)||(41750-41790)
[»] scaffold0005 (1 HSPs)
scaffold0005 (16-52)||(271046-271082)


Alignment Details
Target: chr1 (Bit Score: 202; Significance: 1e-110; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 129 - 398
Target Start/End: Original strand, 9164734 - 9165006
Alignment:
Q  129 ttctttttgactttgtcttttgttgcttaattgttgactttgaaaggaagattgaactggtatatattctctcatgaaagtaactagtgtagcacgtgtg 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||| |||||||||    
T  9164734 ttctttttgactttgtcttttgttgcttaattgttgactttgaaaggaagattgaactggtat----tctctcatgaaagtaactagtgtggcacgtgtg 9164829  T
Q  229 aaatatgaattgggtttaatgtttataacatccaaaattatcgtcattta-------ttannnnnnnncacggcatgtatgttattttggttcattttta 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||       ||         ||||||||||||||||||||||||||||||||    
T  9164830 aaatatgaattgggtttaatgtttataacatccaaaattatcgtcatttatctttcttttttttctttcacggcatgtatgttattttggttcattttta 9164929  T
Q  322 taagaattatcaagtatcaaatataaaattcaaatgaaaacatgagtgaagtattatagatttgaacattaagagct 398  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9164930 taagaattatcaagtatcaaatataaaattcaaatgaaaacatgagtgaagtattatagatttgaacattaagagct 9165006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 40054882 - 40054995
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  40054882 atataaatattgataaataactctttattttataaaataatcgttaaattgtaaatatttgaagcaggagtaccggtacacctcaatttgtgaggtgtac 40054981  T
Q  116 tgtagaagttccct 129  Q
     |||||||||||||    
T  40054982 cgtagaagttccct 40054995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 43916458 - 43916346
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  43916458 atataaatatggataaataactctttatttcataaaataatcgttaaattgtaaatatttgaagcaggagtaccggtacacctcaatttgtgaggtgtac 43916359  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  43916358 cgtagaagttccc 43916346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 1845185 - 1845073
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||| ||||||| ||    
T  1845185 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaagtatttgaagcaggagtaccggtacacctcaatttgtgaggtgcac 1845086  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  1845085 cgtagaagttccc 1845073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 38207635 - 38207527
Alignment:
Q  22 atattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtaga 121  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||| |||||||||||||||||||||||| |||||    
T  38207635 atattgataaataactcttcatttcataaaataatcgttaaattgtaaatatttgaagcagaagtaccgatacacctcaatttatgaggtgtaccgtaga 38207536  T
Q  122 agttccctt 130  Q
    |||||||||    
T  38207535 agttccctt 38207527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 45650302 - 45650414
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||| |||||||| |||||| |||    
T  45650302 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttgaagctggagtaccggtacatctcaatttgtgaggtatac 45650401  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  45650402 cgtagaagttccc 45650414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 7435809 - 7435922
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| || ||  |||||||||| ||||||||||||| ||||||||||    
T  7435809 atataaatatggataaataactttttatttcataaaataatcgttaaattgtaaata-ttgaaggaggagtaccgatacacctcaatttgtgaggtgtac 7435907  T
Q  116 tgtagaagttccctt 130  Q
     ||||||||||||||    
T  7435908 cgtagaagttccctt 7435922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 44808699 - 44808811
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||| ||||||||| ||||||||| ||||||||||||||||||| ||||||||| || |||||||| |||||||||||||||| |||| |||||    
T  44808699 atataaatatggataaataattctttattttataaaataatcgttaaattataaatatttgaagcaggagtatcggtacacctcaatttgtgagatgtac 44808798  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  44808799 cgtagaagttccc 44808811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 51991826 - 51991910
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctca 100  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  51991826 atataaatatggataaataactctttatttcataaaataatcgttaaattgtaaatatttgaagcaggagtaccggtacacctca 51991910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 44979167 - 44979276
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaa-tatttaaaacaggagtaccggtacacctcaatttatgaggtgta 114  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| | ||||||  ||||||||| |||||||| |||||||||||||||    
T  44979167 atataaatattgatgaataactctttatttcataaaataatcgttaaattataaattttttaaagtaggagtaccagtacaccttaatttatgaggtgta 44979266  T
Q  115 ctgtagaagt 124  Q
    | ||||||||    
T  44979267 ccgtagaagt 44979276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 51004903 - 51004789
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgtt-aaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgta 114  Q
    ||||| ||||| |||||||||||||||||| |||||||||||||| ||||| ||||| ||| ||  |||||||||||||||||||||||| |||||||||    
T  51004903 atataaatatttataaataactctttattttataaaataatcgtttaaattataaatttttgaagtaggagtaccggtacacctcaatttgtgaggtgta 51004804  T
Q  115 ctgtagaagttccct 129  Q
    | |||||| ||||||    
T  51004803 ccgtagaaattccct 51004789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 43146717 - 43146823
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| ||| ||  ||||||||| |||||||||||||  ||||||||||    
T  43146717 atataaatattgatgaataactctttatttcataaaataatcgttaaattataaatttttgaagtaggagtaccagtacacctcaatt--tgaggtgtac 43146814  T
Q  116 tgtagaagt 124  Q
     ||||||||    
T  43146815 cgtagaagt 43146823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 26423953 - 26423845
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||| ||| ||||||||||||||||||||||||||  ||||||| ||||| ||| ||  |||||||||||||||||| ||||||||||||||||    
T  26423953 atataaatatcgatgaataactctttatttcataaaataattattaaattataaatttttgaagtaggagtaccggtacaccttaatttatgaggtgtac 26423854  T
Q  116 tgtagaagt 124  Q
     ||||||||    
T  26423853 cgtagaagt 26423845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 24452032 - 24452120
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaattt 104  Q
    ||||| ||||| |||||||||||||||||||||||| | ||||||||||| ||||| ||||||| || |||||||||||||||||||||    
T  24452032 atataaatattaataaataactctttatttcataaactgatcgttaaattataaatttttaaaatagaagtaccggtacacctcaattt 24452120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 49982568 - 49982454
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||||| ||||| ||  |||||||||||||| || ||||| || ||||| | || | |||||||| |||||||||||||||||||||||||||    
T  49982568 atataaatattgacaaatagctacttatttcataaaatgattgttaatttataaatttatatagcaggagtatcggtacacctcaatttatgaggtgtac 49982469  T
Q  116 tgtagaagttccctt 130  Q
     ||||||||||||||    
T  49982468 cgtagaagttccctt 49982454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 24593974 - 24593915
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatattt 75  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24593974 atataaatattaataaataactctttatttcataaaataatcgttaaattgtaaatattt 24593915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 23540040 - 23539940
Alignment:
Q  30 aaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    ||||| || ||||||||||| |||  ||||||| || ||| | |||| | || |||||||||||||||||||||| |||||||||| |||||||||||||    
T  23540040 aaatagctttttatttcatagaatggtcgttaatttataattttttagagcaagagtaccggtacacctcaatttctgaggtgtaccgtagaagttccct 23539941  T
Q  130 t 130  Q
    |    
T  23539940 t 23539940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 32912314 - 32912211
Alignment:
Q  25 ttgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagt 124  Q
    |||| ||||| || |||||||| |||||| |||||||| || ||||| | | ||    |||||||| ||||||||||||| |||||||||||||||||||    
T  32912314 ttgacaaatagctatttatttcttaaaatgatcgttaatttataaatttatgaagtgagagtaccgatacacctcaatttgtgaggtgtactgtagaagt 32912215  T
Q  125 tccc 128  Q
    ||||    
T  32912214 tccc 32912211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 51161408 - 51161490
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacct 98  Q
    ||||| ||||| |||||||||| |||||| |||||||| ||||||||||| |||   |||||||||| ||||||| |||||||    
T  51161408 atataaatattaataaataactttttattacataaaatgatcgttaaattataagattttaaaacagaagtaccgatacacct 51161490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 12838072 - 12838177
Alignment:
Q  24 attgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaag 123  Q
    ||||||||||  || |||||||||||||||||||||| | || | ||| | ||||  | |||||||||||||||||| ||| | ||||||||  ||||||    
T  12838072 attgataaatcgctttttatttcataaaataatcgttcacttatcaatttataaaggaagagtaccggtacacctcattttgttaggtgtaccttagaag 12838171  T
Q  124 ttccct 129  Q
    ||||||    
T  12838172 ttccct 12838177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 36735616 - 36735512
Alignment:
Q  25 ttgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaaca-ggagtaccggtacacctcaatttatgaggtgtactgtagaag 123  Q
    |||| ||||| ||||||| ||| |||||||||| | || || | ||| | |||| || |||||||||||||||  ||||||||||||||||| |||||||    
T  36735616 ttgacaaatagctctttacttcctaaaataatcataaatttatcaatttataaagcaaggagtaccggtacactccaatttatgaggtgtaccgtagaag 36735517  T
Q  124 ttccc 128  Q
    |||||    
T  36735516 ttccc 36735512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 40868245 - 40868134
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||| |||||||||||   |||||||| ||||| ||| |||| || ||||| | | || ||| |||| |||||||||||||||||||||||||||    
T  40868245 atataaataatgataaataacaacttatttcaaaaaatgatcattaatttataaatttatgaagcag-agtatcggtacacctcaatttatgaggtgtac 40868147  T
Q  116 tgtagaagttccc 128  Q
     ||||||| ||||    
T  40868146 cgtagaagctccc 40868134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 9587937 - 9588054
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaa--taatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgt 113  Q
    ||||| ||||| | ||||| || ||||||||||||||  ||||| |||| || ||||  | | || |||||||||||||| |||||| ||||||| ||||    
T  9587937 atataaatattaacaaatagctatttatttcataaaagataatcattaatttataaaattatgaagcaggagtaccggtatacctcactttatga-gtgt 9588035  T
Q  114 actgtagaagttcccttct 132  Q
    || ||||||||||||||||    
T  9588036 accgtagaagttcccttct 9588054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 17203067 - 17203155
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    |||||||||||||| ||| |||| || ||||| | | || ||  |||| ||||||||||||||||||||||||||| ||||||| ||||||    
T  17203067 ttatttcataaaatgatcattaatttataaatttatgaagca--agtatcggtacacctcaatttatgaggtgtaccgtagaagctccctt 17203155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 29877749 - 29877702
Alignment:
Q  81 aggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||||    
T  29877749 aggagtaccggtacacccaaatttatgaggtgtaccgtagaagttccc 29877702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 38261162 - 38261211
Alignment:
Q  80 caggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  38261162 caggagtaccggtacacctcactttatga-gtgtaccgtagaagttccctt 38261211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 25702479 - 25702435
Alignment:
Q  83 gagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||    
T  25702479 gagtaccggtacacctcaatttatga-gtgtaccgtagaagttccc 25702435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 34038274 - 34038163
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaata--atcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgt 113  Q
    ||||| ||||| | |||||||| |||||||||||||| |  |||||||| || ||||  | | || ||||||||||||||||||||| ||| ||| ||||    
T  34038274 atataaatattaacaaataactatttatttcataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtga-gtgt 34038176  T
Q  114 actgtagaagttc 126  Q
    || ||||||||||    
T  34038175 accgtagaagttc 34038163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 41541590 - 41541501
Alignment:
Q  16 atatacatattgataaataactctttatttcat-aaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaattt 104  Q
    ||||| ||||||| ||||| ||||||||||||| ||||| |||||||| |  ||||| | | || || ||||||||||||||||||||||    
T  41541590 atataaatattgacaaatagctctttatttcataaaaatgatcgttaattcataaatttatgaagcaagagtaccggtacacctcaattt 41541501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 41568763 - 41568851
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    |||||||||||||| ||| |||| || ||||| | |||| || ||||| |||||||||| ||||| |||||||||| ||||||| |||||    
T  41568763 ttatttcataaaatgatcattaatttataaatttataaagca-gagtatcggtacacctaaatttgtgaggtgtaccgtagaagctccct 41568851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 12105273 - 12105159
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaata--atcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgt 113  Q
    ||||| ||||||| |||||||| |||||| ||||||| |  |||||||| || ||||  | | || || |||||||||||||||||| ||| ||| ||||    
T  12105273 atataaatattgacaaataactatttattacataaaaaattatcgttaatttataaaattatgaagcaagagtaccggtacacctcattttgtga-gtgt 12105175  T
Q  114 actgtagaagttccct 129  Q
    || |||||||||||||    
T  12105174 accgtagaagttccct 12105159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 24511887 - 24511986
Alignment:
Q  30 aaataactctttatttcataaaata-atcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||| |||||||||||||||  |||||||  || ||||| | | || || ||||||||||||||||||||||| || |||||| |||||| |||||    
T  24511887 aaataactatttatttcataaaattgatcgttagtttataaatttatgaagcaagagtaccggtacacctcaatttacga-gtgtaccgtagaaattccc 24511985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 393
Target Start/End: Original strand, 34704472 - 34704540
Alignment:
Q  325 gaattatcaagtatcaaatataaaattcaaatgaaaacatgagtgaagtattatagatttgaacattaa 393  Q
    ||||| ||||||||||||| ||||||||| |||||||||||| ||||| |  ||| |||| ||||||||    
T  34704472 gaattttcaagtatcaaatctaaaattcatatgaaaacatgaatgaagaaccatacatttaaacattaa 34704540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 4156140 - 4156187
Alignment:
Q  81 aggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||||||||||||  |||||| |||||||||| ||||||||||||    
T  4156140 aggagtaccggtacactccaatttgtgaggtgtaccgtagaagttccc 4156187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 13202986 - 13202936
Alignment:
Q  77 aaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||||||||||||||||||| ||| ||| |||||| ||||||||||||    
T  13202986 aaacaggagtaccggtacacctcattttctga-gtgtacagtagaagttccc 13202936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 35533960 - 35533878
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaag 123  Q
    |||||||||||||| ||| |||| || ||||| | |||| || ||||| |||||||||| ||||| |||||||||| |||||||    
T  35533960 ttatttcataaaatgatcattaatttataaatttataaagca-gagtatcggtacacctaaatttgtgaggtgtacggtagaag 35533878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 38862456 - 38862511
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaat 71  Q
    ||||| ||||||| |||||||| ||||||||||||||| |||||||| || |||||    
T  38862456 atataaatattgacaaataactttttatttcataaaatgatcgttaatttataaat 38862511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 395
Target Start/End: Complemental strand, 28915526 - 28915469
Alignment:
Q  337 atcaaatataaaattcaaatgaaaacatgagtgaagtattatagatttgaacattaaga 395  Q
    ||||||| ||||||||| || ||||||||||||||| | |||||||||||||| |||||    
T  28915526 atcaaatctaaaattcatat-aaaacatgagtgaaggactatagatttgaacaataaga 28915469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 41550260 - 41550178
Alignment:
Q  16 atatacatattgataaataactctttatttcat-aaaataatcgttaaattgtaaatatt-taaaacaggagtaccggtacac 96  Q
    ||||| ||||||| |||||||| |||||||||| |||||||||||||| || ||| | || | ||||| ||||||||||||||    
T  41550260 atataaatattgacaaataactttttatttcataaaaataatcgttaatttataagttttgtgaaacaagagtaccggtacac 41550178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 24677640 - 24677548
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttcccttctt 133  Q
    |||||||||||||| ||| |||| || ||||| | | || ||| | || |||||||||||||||||||||||| || | ||||| |||||||||    
T  24677640 ttatttcataaaatgatcattaatttataaatttatgaagcagaa-tatcggtacacctcaatttatgaggtgcaccgcagaagctcccttctt 24677548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 25081808 - 25081756
Alignment:
Q  77 aaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||| ||||||| ||||||||||||||| || ||||||||| |||||||||||    
T  25081808 aaacaagagtaccagtacacctcaatttacga-gtgtactgtggaagttccctt 25081756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 44264013 - 44264065
Alignment:
Q  77 aaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    |||||||||||||||||||||||| ||| ||| |||||| ||||| ||||||||    
T  44264013 aaacaggagtaccggtacacctcactttgtga-gtgtaccgtagatgttccctt 44264065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 129
Target Start/End: Complemental strand, 46707391 - 46707343
Alignment:
Q  80 caggagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||| |||||    
T  46707391 caggagtaccggtacaccttaatttatga-gtgtaatgtagaagctccct 46707343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 46918678 - 46918781
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||||| ||||| ||||| |||||||||||| |||||||| || ||||| | | || || ||||||||||||| |||  ||| ||||||||||    
T  46918678 atataaatattgacaaatagctctt-atttcataaaatgatcgttaatttataaatttatgaagcaagagtaccggtacatctc-ttttgtgaggtgtac 46918775  T
Q  116 tgtaga 121  Q
     |||||    
T  46918776 ggtaga 46918781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 47458889 - 47458934
Alignment:
Q  83 gagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||| |||||||||||||||| |||||||||| ||||||| ||||    
T  47458889 gagtatcggtacacctcaatttgtgaggtgtaccgtagaagctccc 47458934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 52345649 - 52345597
Alignment:
Q  77 aaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||| |||||||||||||||||| ||| ||| |||||| ||||||||||||||    
T  52345649 aaacaagagtaccggtacacctcactttgtga-gtgtaccgtagaagttccctt 52345597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 10574700 - 10574748
Alignment:
Q  87 accggtacacctcaatttatgaggtgtactgtagaagttcccttctttt 135  Q
    |||| |||||||||||||||||||||||| |||||| | ||||| ||||    
T  10574700 accgatacacctcaatttatgaggtgtaccgtagaaatccccttatttt 10574748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 23582173 - 23582133
Alignment:
Q  83 gagtaccggtacacctcaatttatgaggtgtactgtagaag 123  Q
    ||||| |||||||||||||||| |||||||||| |||||||    
T  23582173 gagtatcggtacacctcaatttgtgaggtgtaccgtagaag 23582133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 39084797 - 39084710
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||||||||| ||| |||| || ||||| | | || ||| |||| || ||||||||||||| |||||||||| ||||||| ||||    
T  39084797 ttatttcataaaatgatcattaatttataaatttatgaagcag-agtatcgatacacctcaatttgtgaggtgtaccgtagaagctccc 39084710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 46283092 - 46283179
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||||||||| ||| |||| || ||||| | |||| || ||||| || ||||||| ||||| |||||||||| ||||||| ||||    
T  46283092 ttatttcataaaatgatcattaatttataaatttataaagca-gagtatcgatacacctaaatttgtgaggtgtaccgtagaagctccc 46283179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 50631641 - 50631593
Alignment:
Q  80 caggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||| ||||||| ||||||||||| ||| |||||| ||||||||||||    
T  50631641 caggattaccggtgcacctcaatttgtgatgtgtaccgtagaagttccc 50631593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 4e-48; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 41555543 - 41555422
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  41555543 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttgaagcaggagtaccggtacacctcaatttgtgaggtgtac 41555444  T
Q  116 tgtagaagttcccttctttttg 137  Q
     ||||||||||||||| |||||    
T  41555443 cgtagaagttcccttcattttg 41555422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 15362581 - 15362469
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||| ||||||||    
T  15362581 atataaatattgataaataactctttatttcataaaataatcgttaaattataaatatttgaagcaggagtaccggtacacctcaatttataaggtgtac 15362482  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  15362481 cgtagaagttccc 15362469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 34188829 - 34188941
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| | ||||||||    
T  34188829 atataaatattgataaataactcttcatttcataaaataatcgttaaattgtaaatatttgaagcaggagtaccggtacacctcaatttgtaaggtgtac 34188928  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  34188929 cgtagaagttccc 34188941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 40810713 - 40810827
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| | |  |||||    
T  40810713 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttgaagcaggagtaccggtacacctcaatttgtaaaatgtac 40810812  T
Q  116 tgtagaagttccctt 130  Q
     ||||||||||||||    
T  40810813 cgtagaagttccctt 40810827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 39089728 - 39089629
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||| ||| ||||||    
T  39089728 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaaaatttaaagcaggagtatcggtacacctcaatttgtgaagtgtac 39089629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 8362513 - 8362400
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||| |||||||||||||||||||||||||    
T  8362513 atataaatattgatgaataagtctttatttcataaaataatcgttaaattataaatttttgaaataggagtaccagtacacctcaatttatgaggtgtac 8362414  T
Q  116 tgtagaagttccct 129  Q
     |||||||| ||||    
T  8362413 cgtagaagtcccct 8362400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 34852467 - 34852355
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| || |||||||||||| |||||| |||    
T  34852467 atataaatatcgataaataactctttatttcataaaataatcgttaaattgtaaatatttgaagcagaagtactggcacacctcaatttgtgaggtatac 34852368  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  34852367 cgtagaagttccc 34852355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 12002640 - 12002750
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||||| || ||||||| ||||||||||||| ||||||||||    
T  12002640 atataaatattgataa-taactctttatttcataaaatgatcgttaaattataaatttttaaaatagaagtaccgatacacctcaatttgtgaggtgtac 12002738  T
Q  116 tgtagaagttcc 127  Q
     |||||||||||    
T  12002739 cgtagaagttcc 12002750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 713471 - 713362
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||  || |||||| ||||| |||||||||||| ||||||    
T  713471 atataaatattgataaataactctttatttcataaaataaacgttaagttgtaaatatttaaagtagaagtaccagtacatctcaatttatgaagtgtac 713372  T
Q  116 tgtagaagtt 125  Q
     || ||||||    
T  713371 cgtggaagtt 713362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 12071449 - 12071556
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||| |||| ||||| ||| ||  ||||||||||||||||||||||||||||||||||     
T  12071449 atataaatattgataaataactctttacttcataaaataatcgtt-aattataaatttttgaagtaggagtaccggtacacctcaatttatgaggtgtaa 12071547  T
Q  116 tgtagaagt 124  Q
     ||||||||    
T  12071548 cgtagaagt 12071556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 25712830 - 25712717
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| ||  || |||| |||||||||||  ||||||||||||||    
T  25712830 atataaatattgataaataactctttattttataaaataatcgttaaattataaatttttgaagtagaagtatcggtacacctcggtttatgaggtgtac 25712731  T
Q  116 tgtagaagttccct 129  Q
     |||||||| ||||    
T  25712730 cgtagaagtcccct 25712717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 15426136 - 15426027
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaa-tatttaaaacaggagtaccggtacacctcaatttatgaggtgta 114  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||||||| |||| | |||||| |||||||||||| |||||||  ||||| || ||||    
T  15426136 atataaatattgataaataactctttatttcataaaagaatcattaaattataaattttttaaagcaggagtaccggcacacctcggtttataagttgta 15426037  T
Q  115 ctgtagaagt 124  Q
    | ||||||||    
T  15426036 ccgtagaagt 15426027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 2859464 - 2859357
Alignment:
Q  22 atattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtaga 121  Q
    ||||||| ||||| || ||||||||||||||| | |||||| || ||||| | || |||| ||||||||||||||||||||||||||| ||||| |||||    
T  2859464 atattgacaaatagctttttatttcataaaatga-cgttaatttataaatttatagaacaagagtaccggtacacctcaatttatgagatgtaccgtaga 2859366  T
Q  122 agttccctt 130  Q
    |||||||||    
T  2859365 agttccctt 2859357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 38599922 - 38599866
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaata 72  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38599922 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaata 38599866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 15334201 - 15334090
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||||||||| |||| ||||||||||||||| ||| ||||||| ||||| ||| ||  |||| ||||||||||||||||||| ||| ||||||    
T  15334201 atataaatattgataaacaactatttatttcataaaatgatcattaaattataaatttttcaagtaggaataccggtacacctcaatttgtgaagtgtac 15334102  T
Q  116 tgtagaagttcc 127  Q
     |||||| ||||    
T  15334101 cgtagaaattcc 15334090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 38073212 - 38073106
Alignment:
Q  22 atattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtaga 121  Q
    ||||||| ||||| || ||||||||||||||| |||||||| || ||||| | | ||  | |||||||||||||||||||||| |||||||||| |||||    
T  38073212 atattgacaaatatctatttatttcataaaatgatcgttaatttataaatttatgaagtaagagtaccggtacacctcaatttgtgaggtgtaccgtaga 38073113  T
Q  122 agttccc 128  Q
    |||||||    
T  38073112 agttccc 38073106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 25740281 - 25740393
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||||| ||||| || ||||||||||||||| |||| ||| || ||| | | | ||||| ||||| ||||||||||||||||||||||| |||    
T  25740281 atataaatattgacaaatagctttttatttcataaaatgatcggtaatttataattttatgaaacaagagtatcggtacacctcaatttatgaggtatac 25740380  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  25740381 cgtagaagttccc 25740393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 22622530 - 22622431
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||| ||| ||||||| | ||| ||| || |||||||| | ||  |||||||||| ||||||||||    
T  22622530 atataaatattgataaataactctttatttcataaaatgatctttaaattatcaatttttgaagcaggagtatcagtgtacctcaatttgtgaggtgtac 22622431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 12182861 - 12182967
Alignment:
Q  24 attgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaag 123  Q
    |||||||||||  | |||||||||||||||||||||||| || | ||| | ||||  | |||||||||||||||||| ||| | |||||||| |||||||    
T  12182861 attgataaatagttttttatttcataaaataatcgttaatttatcaatttataaagtaagagtaccggtacacctcattttgttaggtgtaccgtagaag 12182960  T
Q  124 ttccctt 130  Q
    |||||||    
T  12182961 ttccctt 12182967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 33429428 - 33429540
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||| |||||||||||   |||||||| ||||| ||| |||| || ||||| | | |||||| |||| |||||||||||||||||||||||||||    
T  33429428 atataaataatgataaataacaacttatttcaaaaaatgatcattaatttataaatttatgaaacag-agtatcggtacacctcaatttatgaggtgtac 33429526  T
Q  116 tgtagaagttccct 129  Q
    |||||||| |||||    
T  33429527 tgtagaagctccct 33429540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 45690611 - 45690499
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||  |||| || ||||||||||||||| ||| |||| || ||||| | || | |  |||||||||||||||||||||| ||||||||||    
T  45690611 atataaatattgactaatagctttttatttcataaaatgatccttaatttataaatttatagagcgagagtaccggtacacctcaatttgtgaggtgtac 45690512  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  45690511 cgtagaagttccc 45690499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 37781972 - 37781866
Alignment:
Q  22 atattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtaga 121  Q
    ||||||| ||||| |||||||||||||||||| |||||| | || ||||| | | ||  | ||||||  |||||||||||||| |||||||||| |||||    
T  37781972 atattgacaaatagctctttatttcataaaatgatcgttcatttataaatttatgaaggaagagtacatgtacacctcaatttgtgaggtgtaccgtaga 37781873  T
Q  122 agttccc 128  Q
    |||||||    
T  37781872 agttccc 37781866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 42640956 - 42640850
Alignment:
Q  22 atattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtaga 121  Q
    ||||||| ||||| || ||||||||||||||| |||||||| || ||||| | | ||  | ||||||||||| |||||||||| |||||||| | |||||    
T  42640956 atattgacaaatacctatttatttcataaaatgatcgttaatttataaatttatgaagtaagagtaccggtatacctcaatttgtgaggtgtgccgtaga 42640857  T
Q  122 agttccc 128  Q
    |||||||    
T  42640856 agttccc 42640850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 8333938 - 8333890
Alignment:
Q  81 aggagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||    
T  8333938 aggagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccct 8333890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 17809123 - 17809063
Alignment:
Q  42 atttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaat 102  Q
    ||||||||||||||| |||||||| ||||||||| || ||||||||||||| |||||||||    
T  17809123 atttcataaaataattgttaaattataaatatttgaagcaggagtaccggtgcacctcaat 17809063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 28318128 - 28318039
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    |||||||||||||| ||| |||| || ||||| | | |||||| |||| |||||||||||||||| |||||||||| ||||||| ||||||    
T  28318128 ttatttcataaaatgatcattaatttataaatttatgaaacag-agtatcggtacacctcaatttgtgaggtgtaccgtagaagctccctt 28318039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 11088537 - 11088634
Alignment:
Q  33 taactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||| ||||||||||||||| || ||||| || ||||| | |  |  | |||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  11088537 taactttttatttcataaaatgattgttaatttataaatttatggaggaagagtactggtacacctcaatttgtgaggtgtaccgtagaagttccctt 11088634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 40287818 - 40287705
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||||| ||||| || |||||||||| |||| |||||||| || ||| | | |  | || ||||| || ||||||||||||||||||||||||    
T  40287818 atataaatattgaaaaatagctttttatttcatgaaatgatcgttaatttataattttatggagcaagagtatcgatacacctcaatttatgaggtgtac 40287719  T
Q  116 tgtagaagttccct 129  Q
      ||||||||||||    
T  40287718 aatagaagttccct 40287705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 5615745 - 5615790
Alignment:
Q  83 gagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||| |||||||||||||||||||||||  ||||||||||||    
T  5615745 gagtaccgatacacctcaatttatgaggtgtatcgtagaagttccc 5615790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 2283277 - 2283222
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaat 71  Q
    ||||| ||||||| ||||| || |||||||||||||||||||||||| || |||||    
T  2283277 atataaatattgacaaatagctatttatttcataaaataatcgttaatttataaat 2283222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 38030604 - 38030557
Alignment:
Q  81 aggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||||||||||||| |||||| |||||||||  ||||||||||||    
T  38030604 aggagtaccggtacaccccaatttgtgaggtgtatcgtagaagttccc 38030557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 7673342 - 7673293
Alignment:
Q  80 caggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||||||||||||||||||| ||| ||| |||||| ||||||||||||||    
T  7673342 caggagtaccggtacacctcattttgtga-gtgtaccgtagaagttccctt 7673293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 32602350 - 32602301
Alignment:
Q  80 caggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||||||||||||||||||| ||| ||| |||||| ||||||||||||||    
T  32602350 caggagtaccggtacacctcattttgtga-gtgtaccgtagaagttccctt 32602301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 35895358 - 35895309
Alignment:
Q  80 caggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||||||||||||||||||| ||||||| |||||| ||| ||||||||||    
T  35895358 caggagtaccggtacacctcactttatga-gtgtaccgtaaaagttccctt 35895309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 396
Target Start/End: Complemental strand, 7328972 - 7328903
Alignment:
Q  327 attatcaagtatcaaatataaaattcaaatgaaaacatgagtgaagtattatagatttgaacattaagag 396  Q
    ||||||||| |||||||  |||| ||| |||||||||||| ||||  |  ||||||||||||||||||||    
T  7328972 attatcaagcatcaaatcaaaaactcatatgaaaacatgaatgaacgaacatagatttgaacattaagag 7328903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 129
Target Start/End: Complemental strand, 25331502 - 25331454
Alignment:
Q  80 caggagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    ||||||||||||||||||||| ||| ||| |||||| |||||||||||||    
T  25331502 caggagtaccggtacacctcattttgtga-gtgtaccgtagaagttccct 25331454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 9589474 - 9589521
Alignment:
Q  81 aggagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    |||||||||||||||||||| ||| ||| |||||| |||||||||||||    
T  9589474 aggagtaccggtacacctcattttgtga-gtgtaccgtagaagttccct 9589521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 9e-46; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 21919800 - 21919687
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  21919800 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttgaagcaggagtaccggtacacctcaatttgtgaggtgtac 21919701  T
Q  116 tgtagaagttccct 129  Q
     |||||||||||||    
T  21919700 cgtagaagttccct 21919687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 5215319 - 5215431
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  5215319 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaagcaggagtaccggtacacctcaatttgtgatgtgtac 5215418  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  5215419 cgtagaagttccc 5215431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 23182502 - 23182390
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||| ||||| ||||||||||    
T  23182502 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttgaagcaggagtaccagtacaccttaatttgtgaggtgtac 23182403  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  23182402 cgtagaagttccc 23182390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 48460363 - 48460251
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||| ||||||||||    
T  48460363 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttgaagcaggagtaccggtatacctcaatttgtgaggtgtac 48460264  T
Q  116 tgtagaagttccc 128  Q
      |||||||||||    
T  48460263 catagaagttccc 48460251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 29689037 - 29688922
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaa-tatttaaaacaggagtaccggtacacctcaatttatgaggtgta 114  Q
    ||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||| || |||||||||||||||||||||||||||||||||||    
T  29689037 atataaatattgataaataactctttaattcataaaataatcattaaattgtaaaatatttgaagcaggagtaccggtacacctcaatttatgaggtgta 29688938  T
Q  115 ctgtagaagttccctt 130  Q
    | ||||||||||||||    
T  29688937 ccgtagaagttccctt 29688922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 31743596 - 31743709
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| || |||||||||||||||||| |||||| ||||||||||    
T  31743596 atataaatatttataaataactctttatttcataaaataatcgttaaattataaatttttgaagcaggagtaccggtacaccacaatttgtgaggtgtac 31743695  T
Q  116 tgtagaagttccct 129  Q
     |||||||||||||    
T  31743696 cgtagaagttccct 31743709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 13806655 - 13806761
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||  |||||||| ||||||||||||||||||| ||||||    
T  13806655 atataaatattgataaataactctttatttcataaaataatcgttaaattataaatttttgaagtaggagtactggtacacctcaatttatgaagtgtac 13806754  T
Q  116 tgtagaa 122  Q
     ||||||    
T  13806755 cgtagaa 13806761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 32823399 - 32823517
Alignment:
Q  13 aatatatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtg 112  Q
    |||||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||| ||| || |||||||| |||||||||||||||| |  ||||    
T  32823399 aatatataaatattgataaataactttttatttcataaaata-tcgttaaattataaatttttgaagcaggagtatcggtacacctcaatttgtttggtg 32823497  T
Q  113 tactgtagaagttcccttct 132  Q
    ||| ||||||||||| ||||    
T  32823498 taccgtagaagttccattct 32823517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 1343315 - 1343429
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||| |||  |  ||||||||||||||| ||||||||||| |||||||    
T  1343315 atataaatatcgataaataactctttatttcataaaataatccttaaattataaatttttggagtaggagtaccggtacatctcaatttatgtggtgtac 1343414  T
Q  116 tgtagaagttccctt 130  Q
     |||||||| |||||    
T  1343415 cgtagaagtcccctt 1343429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 41769397 - 41769289
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||||  ||| || |||||||||| ||||||||||||||||||||||||     
T  41769397 atataaatattgaaaaataact-tttatttcataaaataatcgttaaattataaaattttgaagcaggagtaccagtacacctcaatttatgaggtgtat 41769299  T
Q  116 tgtagaagtt 125  Q
     |||||||||    
T  41769298 cgtagaagtt 41769289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 17834226 - 17834310
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctca 100  Q
    ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||    
T  17834226 atataaatatcgataaataacactttatttcataaaataatcgttaaattgtaaatatttaaagcaggagtatcggcacacctca 17834310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 38859541 - 38859637
Alignment:
Q  28 ataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagt 124  Q
    |||||||| ||||||||||||||||||||||| ||||| ||||| ||| ||  ||||||||| |||||||||||||||| |||||||| ||||||||    
T  38859541 ataaataattctttatttcataaaataatcgtaaaattataaatttttgaagtaggagtaccagtacacctcaatttataaggtgtaccgtagaagt 38859637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 31760282 - 31760340
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatt 74  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31760282 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatt 31760340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 9682125 - 9682025
Alignment:
Q  30 aaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    ||||| |||||||||||||||||| |||||||| |||||||| | | ||| | ||||| |||||||| | || |||||| ||||| ||||||||||||||    
T  9682125 aaatagctctttatttcataaaatcatcgttaatttgtaaatttattaaataagagtatcggtacactttaaattatgaagtgtagtgtagaagttccct 9682026  T
Q  130 t 130  Q
    |    
T  9682025 t 9682025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 27800140 - 27800033
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||  |||| || ||||||||||||||| ||| |||| || ||||| | || | |  |||||||||||||||||||||||||||||||||    
T  27800140 atataaatattgactaatagctttttatttcataaaatgatctttaatttataaatttatagagcgagagtaccggtacacctcaatttatgaggtgtac 27800041  T
Q  116 tgtagaag 123  Q
     |||||||    
T  27800040 cgtagaag 27800033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 42584056 - 42584170
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||||| |||||||   ||| |||||||||| ||| |||| || ||||| | | || |||||||| |||||||| ||||||| ||||||||||    
T  42584056 atataaatattgacaaataacaacttaattcataaaatgatcattaatttataaatttatgaagcaggagtatcggtacacatcaatttgtgaggtgtac 42584155  T
Q  116 tgtagaagttccctt 130  Q
     ||||||||||||||    
T  42584156 cgtagaagttccctt 42584170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 130
Target Start/End: Complemental strand, 38882904 - 38882816
Alignment:
Q  42 atttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||||||||||||| ||||| || | ||| | |||| || |||||||||||||||||| ||| | |||||||| ||||||||||||||    
T  38882904 atttcataaaataattgttaatttatcaatttataaagcaagagtaccggtacacctcattttgttaggtgtaccgtagaagttccctt 38882816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 127
Target Start/End: Original strand, 2089169 - 2089268
Alignment:
Q  28 ataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttcc 127  Q
    ||||||| || ||||||| |||||| |||| |||| || | ||| | |||| || |||||||||||||||||| ||||| |||||||| |||||||||||    
T  2089169 ataaatagctttttattttataaaagaatcattaatttatcaatttataaagcaagagtaccggtacacctcattttattaggtgtaccgtagaagttcc 2089268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 11640613 - 11640702
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    |||||||||||||||||| |||| || ||||| | |||| | |||||| ||||||||||||||||  ||||||||| ||||||| ||||||    
T  11640613 ttatttcataaaataatcattaatttataaatttataaagc-ggagtatcggtacacctcaatttgcgaggtgtaccgtagaagctccctt 11640702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 31311643 - 31311749
Alignment:
Q  22 atattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaa-tttatgaggtgtactgtag 120  Q
    ||||||| ||||| || |||||||||||||||||||||||| || ||||| | |  | || |||||||||| |||||||| ||| |||||||||| |||     
T  31311643 atattgacaaatagctttttatttcataaaataatcgttaatttataaatttatggagcaagagtaccggtgcacctcaattttgtgaggtgtaccgtaa 31311742  T
Q  121 aagttcc 127  Q
    |||||||    
T  31311743 aagttcc 31311749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 2682871 - 2682794
Alignment:
Q  50 aaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttcc 127  Q
    |||| ||||||||||| ||||| ||||||| | |||||   ||||||||||||||||||||||||| ||| |||||||    
T  2682871 aaatgatcgttaaattataaatttttaaaataagagtattcgtacacctcaatttatgaggtgtaccgtataagttcc 2682794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 8159691 - 8159639
Alignment:
Q  75 taaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttcc 127  Q
    |||||||| |||||||| |||| |||||||||||||||||| |||||||||||    
T  8159691 taaaacagaagtaccggcacacttcaatttatgaggtgtaccgtagaagttcc 8159639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 27897321 - 27897222
Alignment:
Q  30 aaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    |||||||  ||||||||||||||| ||| |||| || ||||| | |||| | |||||| ||||||||||||||||  ||||||||| ||||||| |||||    
T  27897321 aaataacaatttatttcataaaatgatcattaatttataaatttataaagc-ggagtatcggtacacctcaatttgcgaggtgtaccgtagaagctccct 27897223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 40856627 - 40856535
Alignment:
Q  39 tttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtag-aagttccctt 130  Q
    ||||||||||||||||||| |||| || ||||| | || | |  ||||| |||||||||||||||| |||||||||| |||| ||||||||||    
T  40856627 tttatttcataaaataatccttaatttataaatttatagagcgagagtatcggtacacctcaatttgtgaggtgtaccgtagaaagttccctt 40856535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 45701142 - 45701031
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||| |||||||||||   |||||||| ||||| ||| |||| || ||||| | | || ||| |||| |||||||||||||||||||||||||||    
T  45701142 atataaataatgataaataacaacttatttcaaaaaatgatcattaatttataaatttatgaagcag-agtatcggtacacctcaatttatgaggtgtac 45701044  T
Q  116 tgtagaagttccc 128  Q
     ||||||| ||||    
T  45701043 cgtagaagctccc 45701031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 8578030 - 8577927
Alignment:
Q  22 atattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtaga 121  Q
    ||||||| ||||| || ||||||| ||||||| |||||||| || ||||| | | ||  | |||||  ||||||||||||||||||||||||||  ||||    
T  8578030 atattgacaaatacctatttattttataaaatgatcgttaatttataaatttatgaagtaagagtattggtacacctcaatttatgaggtgtaccataga 8577931  T
Q  122 agtt 125  Q
    ||||    
T  8577930 agtt 8577927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 19345973 - 19346020
Alignment:
Q  83 gagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||| ||||||||||||||||||||||||||| ||||||| ||||||    
T  19345973 gagtatcggtacacctcaatttatgaggtgtaccgtagaagctccctt 19346020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 24149086 - 24149160
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    |||||||||||||||||| |||| || ||||| | |||| ||| |||| ||||||||||||||||||||| |||||    
T  24149086 ttatttcataaaataatcattaatttataaatttataaagcag-agtatcggtacacctcaatttatgagatgtac 24149160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 398
Target Start/End: Complemental strand, 44533703 - 44533636
Alignment:
Q  331 tcaagtatcaaatataaaattcaaatgaaaacatgagtgaagtattatagatttgaacattaagagct 398  Q
    ||||| ||||||| ||||||||| |||||||||||||||||| |  | ||||||||||| ||||||||    
T  44533703 tcaagcatcaaatttaaaattcatatgaaaacatgagtgaaggacaaaagatttgaacactaagagct 44533636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 24204699 - 24204613
Alignment:
Q  43 tttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    |||||||||||||||||||| || | ||| | | || || ||||||||||||| |||| ||||| |||||||  |||||||||||||    
T  24204699 tttcataaaataatcgttaatttatcaatttatgaagcaagagtaccggtacatctcattttattaggtgtatcgtagaagttccct 24204613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 34363703 - 34363613
Alignment:
Q  39 tttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    |||||||||||||||||||||||| || | ||| | | || || |||||| ||||||| ||| ||| | |||||||| |||||||||||||    
T  34363703 tttatttcataaaataatcgttaatttatcaatttatgaagcaagagtactggtacacgtcattttgttaggtgtaccgtagaagttccct 34363613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 26605169 - 26605055
Alignment:
Q  16 atatacatattgataaataactctttatttcat--aaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgt 113  Q
    ||||| |||||||||||||||| ||||||  ||  ||||| |||||||| || ||||  | | || || |||||||||||||||||| ||| ||| ||||    
T  26605169 atataaatattgataaataactatttattatataaaaaattatcgttaatttataaaattatgaagcaagagtaccggtacacctcattttgtga-gtgt 26605071  T
Q  114 actgtagaagttccct 129  Q
    || |||||||||||||    
T  26605070 accgtagaagttccct 26605055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 27427215 - 27427141
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    |||||||||||||| ||| |||| || ||||| | |||| ||| |||| ||||| |||||||||||||||||||||    
T  27427215 ttatttcataaaattatcattaatttataaatttataaatcag-agtatcggtagacctcaatttatgaggtgtac 27427141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 40379083 - 40379036
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaa 63  Q
    ||||| |||||||||||||||| ||||||| ||||||| |||||||||    
T  40379083 atataaatattgataaataactttttattttataaaatgatcgttaaa 40379036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 27567205 - 27567159
Alignment:
Q  83 gagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    |||||||||||||||| ||||| |||||||||| ||| |||||||||    
T  27567205 gagtaccggtacacctaaatttgtgaggtgtaccgtaaaagttccct 27567159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 35925056 - 35925094
Alignment:
Q  24 attgataaataactctttatttcataaaataatcgttaa 62  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  35925056 attgataaatagctttttatttcataaaataatcgttaa 35925094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 16200485 - 16200448
Alignment:
Q  25 ttgataaataactctttatttcataaaataatcgttaa 62  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  16200485 ttgataaataactctttattttataaaatgatcgttaa 16200448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 45442371 - 45442451
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtaga 121  Q
    |||||||||||||| ||  |||| || ||||| | |||| ||| | || ||||||||||||||||||||||||||| |||||    
T  45442371 ttatttcataaaatgattattaatttataaatttataaagcagaa-tatcggtacacctcaatttatgaggtgtaccgtaga 45442451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 3228539 - 3228626
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaattt 104  Q
    ||||| ||| ||| |||||||  ||||||||||||||||||| |||| || ||||| | | || || ||||| ||||||||||||||||    
T  3228539 atataaataatgacaaataaccatttatttcataaaataatcattaatttataaatttatgaagca-gagtatcggtacacctcaattt 3228626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 22639411 - 22639367
Alignment:
Q  84 agtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||| |||||||||||||||| |||||||||| ||||||| ||||    
T  22639411 agtatcggtacacctcaatttgtgaggtgtaccgtagaagctccc 22639367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 49079573 - 49079660
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||| |||||| ||  ||||||| ||||| | |||| ||| |||| ||||||||||||||||  ||||||||| ||||||| ||||    
T  49079573 ttatttcgtaaaatgattattaaattataaatttataaagcag-agtatcggtacacctcaatttgcgaggtgtaccgtagaagctccc 49079660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 4e-45; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 1705900 - 1706012
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||    
T  1705900 atataaatattgataaataactctttatttcataaaataatcgttaaattataaatatttgaagcaggagtaccggtacacctcaatttatgaggtgtac 1705999  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  1706000 cgtagaagttccc 1706012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 21294084 - 21294197
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  21294084 atataaatattgataaataactctttatttcataaaataatcgttacattgtaaatatttgaagcaggagtaccggtacacctcaatttatgaggtgtac 21294183  T
Q  116 tgtagaagttccct 129  Q
     |||| ||||||||    
T  21294184 cgtaggagttccct 21294197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 14507915 - 14508027
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||| || ||||||||||||||||||||||||||||||||||||    
T  14507915 atataaatattgataaataactctttatttcataaaataatcattaaattgcaaatatttgaagcaggagtaccggtacacctcaatttatgaggtgtac 14508014  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  14508015 cgtagaagttccc 14508027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 34 - 128
Target Start/End: Complemental strand, 2994416 - 2994322
Alignment:
Q  34 aactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2994416 aactctttatttcataaaataatcgttaaattgtaaatatttgaagcaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 2994322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 24249100 - 24249214
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||| | ||||||||    
T  24249100 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttgaagcaggagtaccgatacacctcaatttgtaaggtgtac 24249199  T
Q  116 tgtagaagttccctt 130  Q
     ||||||||||||||    
T  24249200 cgtagaagttccctt 24249214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 10887921 - 10887809
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| ||  |||||||||||||||||||||||||||||||||||    
T  10887921 atataaatattgataaataactctttattttataaaataatcgttaaattataaatttttgaagtaggagtaccggtacacctcaatttatgaggtgtac 10887822  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  10887821 cgtagaagttccc 10887809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 19473966 - 19474078
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| || || |||||||||||||||||||||| ||||||||||    
T  19473966 atataaatattgataaataactctttatttcataaaataattgttaaattgaaaatatttgaagcaagagtaccggtacacctcaatttgtgaggtgtac 19474065  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  19474066 cgtagaagttccc 19474078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 1371690 - 1371799
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||| ||||||||||||| |||||| ||     
T  1371690 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttgaaggaggagtaccgatacacctcaatttgtgaggtatat 1371789  T
Q  116 tgtagaagtt 125  Q
     |||||||||    
T  1371790 cgtagaagtt 1371799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 1379438 - 1379547
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||| ||||||||||||| |||||| ||     
T  1379438 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttgaaggaggagtaccgatacacctcaatttgtgaggtatat 1379537  T
Q  116 tgtagaagtt 125  Q
     |||||||||    
T  1379538 cgtagaagtt 1379547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 7344433 - 7344319
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||| |||  |  ||||||||||||||||||||||||||| |||||||    
T  7344433 atataaatatcgataaataactctttatttcataaaataatccttaaattataaatttttggagtaggagtaccggtacacctcaatttatgtggtgtac 7344334  T
Q  116 tgtagaagttccctt 130  Q
     |||||||| |||||    
T  7344333 cgtagaagtcccctt 7344319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 1339668 - 1339780
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| || ||| ||||| ||||||||||||||| ||| ||||||    
T  1339668 atataaatattgataaataactctttatttcataaaatgatcgttaaattataaat-tttgaagcagaagtactggtacacctcaatttgtgacgtgtac 1339766  T
Q  116 tgtagaagttccct 129  Q
     |||||||||||||    
T  1339767 cgtagaagttccct 1339780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 26315750 - 26315799
Alignment:
Q  22 atattgataaataactctttatttcataaaataatcgttaaattgtaaat 71  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26315750 atattgataaataactctttatttcataaaataatcgttaaattataaat 26315799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 10965969 - 10966032
Alignment:
Q  67 taaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||| ||| || ||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  10965969 taaatttttgaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccctt 10966032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 24159576 - 24159519
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacc 97  Q
    |||||||||||||||||||||||||| ||||| ||||||  |||||||||||||||||    
T  24159576 ttatttcataaaataatcgttaaattataaatttttaaagtaggagtaccggtacacc 24159519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 398
Target Start/End: Original strand, 17312269 - 17312352
Alignment:
Q  315 atttttataagaattatcaagtatcaaatataaaattcaaatgaaaacatgagtgaagtattatagatttgaacattaagagct 398  Q
    ||||||||| | ||| ||||| ||  ||||||||| ||| |||||||||||||||||| |  ||||||||||||||||||||||    
T  17312269 atttttatatggattttcaagcattgaatataaaactcatatgaaaacatgagtgaagaaccatagatttgaacattaagagct 17312352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 396
Target Start/End: Complemental strand, 9515566 - 9515494
Alignment:
Q  324 agaattatcaagtatcaaatataaaattcaaatgaaaacatgagtgaagtattatagatttgaacattaagag 396  Q
    |||||| ||||| ||||||| ||||||||| |||||||||||||||||| |  ||||||||||| | ||||||    
T  9515566 agaattttcaagcatcaaatctaaaattcatatgaaaacatgagtgaaggacaatagatttgaatagtaagag 9515494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 16893198 - 16893302
Alignment:
Q  22 atattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtaga 121  Q
    ||||||| ||||| || ||||||| |||||| ||||||||| || ||||| | | ||    |||||||||||||||||||||| ||||||||||  ||||    
T  16893198 atattgacaaatacctatttatttaataaaacaatcgttaatttataaatttatgaagtgagagtaccggtacacctcaatttgtgaggtgtaccataga 16893297  T
Q  122 agttc 126  Q
    |||||    
T  16893298 agttc 16893302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 14779197 - 14779310
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaata-atcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgta 114  Q
    ||||| |||||||||||||  | |||||||||||||| | |||||||| || ||||  | | ||| | |||||||||||| ||||| ||| ||| |||||    
T  14779197 atataaatattgataaatagttatttatttcataaaaaatatcgttaatttataaaattatgaaaaaagagtaccggtacccctcattttgtga-gtgta 14779295  T
Q  115 ctgtagaagttccct 129  Q
    |||||||||||||||    
T  14779296 ctgtagaagttccct 14779310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 14002485 - 14002398
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||||||||||||| |||| || ||||| | | || ||| |||| || ||||||||||||| |||||||||| ||||||| ||||    
T  14002485 ttatttcataaaataatcattaatttataaatttatgaagcag-agtatcgatacacctcaatttctgaggtgtaccgtagaagctccc 14002398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 129
Target Start/End: Complemental strand, 29023717 - 29023618
Alignment:
Q  30 aaataactctttatttcataaaata-atcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||| |||||||||||||||  |||||||  || || || | | || || ||||||||||||||||||||||| || |||||| ||||||||||||    
T  29023717 aaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtaccggtacacctcaatttacga-gtgtaccgtagaagttccc 29023619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 4509724 - 4509837
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaata-atcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgta 114  Q
    ||||| ||||||| ||||| || |||||| ||||||| | |||||||| || ||||  | | || ||||||||||||||||||||| ||| ||| |||||    
T  4509724 atataaatattga-aaatagctatttattacataaaaaatatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtga-gtgta 4509821  T
Q  115 ctgtagaagttccctt 130  Q
    | ||||||||||||||    
T  4509822 ccgtagaagttccctt 4509837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 6295739 - 6295786
Alignment:
Q  83 gagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    |||||||| ||||||||||||| |||||||||| ||||||| ||||||    
T  6295739 gagtaccgatacacctcaatttgtgaggtgtaccgtagaagctccctt 6295786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 6302549 - 6302596
Alignment:
Q  83 gagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    |||||||| ||||||||||||| |||||||||| ||||||| ||||||    
T  6302549 gagtaccgatacacctcaatttgtgaggtgtaccgtagaagctccctt 6302596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 21998975 - 21999014
Alignment:
Q  83 gagtaccggtacacctcaatttatgaggtgtactgtagaa 122  Q
    ||||| ||||||||||||||||||||||||||| ||||||    
T  21998975 gagtatcggtacacctcaatttatgaggtgtaccgtagaa 21999014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 229898 - 229817
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaa 122  Q
    |||||||||||||| ||| |||| || ||||| | | || ||| |||| |||||||||||||||| |||||||||| ||||||    
T  229898 ttatttcataaaatgatcattaatttataaatttatgaagcag-agtatcggtacacctcaatttgtgaggtgtaccgtagaa 229817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 23416856 - 23416904
Alignment:
Q  80 caggagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    ||||||||||||||||||||| ||| ||| |||||| |||||||||||||    
T  23416856 caggagtaccggtacacctcattttgtga-gtgtaccgtagaagttccct 23416904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 14872372 - 14872332
Alignment:
Q  83 gagtaccggtacacctcaatttatgaggtgtactgtagaag 123  Q
    ||||| |||||||||||||||| |||||||||| |||||||    
T  14872372 gagtatcggtacacctcaatttgtgaggtgtaccgtagaag 14872332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 33574646 - 33574760
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaata--atcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgt 113  Q
    ||||| ||||||| ||||| || |||||| ||||||| |  |||||||| || ||||  | | || || |||||||||||||||||| ||| ||| ||||    
T  33574646 atataaatattgaaaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaagagtaccggtacacctcactttgtga-gtgt 33574744  T
Q  114 actgtagaagttccct 129  Q
    || |||||||||||||    
T  33574745 accgtagaagttccct 33574760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 33574824 - 33574938
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaata--atcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgt 113  Q
    ||||| ||||||| ||||| || |||||| ||||||| |  |||||||| || ||||  | | || || |||||||||||||||||| ||| ||| ||||    
T  33574824 atataaatattgaaaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaagagtaccggtacacctcactttgtga-gtgt 33574922  T
Q  114 actgtagaagttccct 129  Q
    || |||||||||||||    
T  33574923 accgtagaagttccct 33574938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 4e-45; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 39939139 - 39939031
Alignment:
Q  22 atattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtaga 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||| |||||    
T  39939139 atattgataaataactctttatttcataaaataatcgttaaattgtaaatatttgaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtaga 39939040  T
Q  122 agttccctt 130  Q
    |||||||||    
T  39939039 agttccctt 39939031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 5140781 - 5140672
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5140781 atataaatattgataaataactcttcatttcataaaataatcgttaaattataaatatttaaaacaggagtaccggtacacctcaatttgtgaggtgtac 5140682  T
Q  116 tgtagaagtt 125  Q
     |||||||||    
T  5140681 cgtagaagtt 5140672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 5204729 - 5204616
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||    
T  5204729 atataaatatcgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaagcaggagtaccgatacacctcaatttgtgaggtgtac 5204630  T
Q  116 tgtagaagttccct 129  Q
     |||||||||||||    
T  5204629 cgtagaagttccct 5204616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 23690613 - 23690500
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| | ||||||||||||||||||| ||||||||||    
T  23690613 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttgaagcagaaataccggtacacctcaatttttgaggtgtac 23690514  T
Q  116 tgtagaagttccct 129  Q
     |||||||||||||    
T  23690513 cgtagaagttccct 23690500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 4429714 - 4429828
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||  ||||||||||||| ||||||||||    
T  4429714 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatatgaaacatgagtaccaatacacctcaatttgtgaggtgtac 4429813  T
Q  116 tgtagaagttccctt 130  Q
     ||||||||||||||    
T  4429814 cgtagaagttccctt 4429828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 40756653 - 40756540
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||| ||||||||||||| ||||||||||    
T  40756653 atataaatatcgataaataactctttatttcataaaataatggttaaattgtaaatatttgaagcaggagtaccgatacacctcaatttgtgaggtgtac 40756554  T
Q  116 tgtagaagttccct 129  Q
     |||||||||||||    
T  40756553 cgtagaagttccct 40756540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 19189402 - 19189515
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| ||| ||  ||||||||  | |||||||||||||||||||||||    
T  19189402 atatatatattgatgaataactctttatttcataaaataatcgttaaattataaatttttgaagtaggagtacgagcacacctcaatttatgaggtgtac 19189501  T
Q  116 tgtagaagttccct 129  Q
     |||||||| ||||    
T  19189502 cgtagaagtcccct 19189515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 4367082 - 4367196
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctca-atttatgaggtgta 114  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||||||| ||||| ||| || ||||||||||| |||||||||  ||| |||||||||    
T  4367082 atataaatactgataaataactctttatttcataaaatgatcgttaaattataaatttttgaaccaggagtaccgatacacctcacttttgtgaggtgta 4367181  T
Q  115 ctgtagaagttccct 129  Q
    | |||||||||||||    
T  4367182 ccgtagaagttccct 4367196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 23408547 - 23408655
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| ||  || || || ||||||||||||||||||| ||||||    
T  23408547 atataaatattgataaataactctttatttcataaaatgatcgttaaattataaatttttgaagtagaagcactggtacacctcaatttatgaagtgtac 23408646  T
Q  116 tgtagaagt 124  Q
     ||||||||    
T  23408647 cgtagaagt 23408655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 18002763 - 18002684
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtaca 95  Q
    ||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||| ||| || ||||||||||||||||    
T  18002763 atataaatattgataaataactctttattttataaaataatcattaaattataaatttttgaagcaggagtaccggtaca 18002684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 31588529 - 31588641
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||||| |||||  | ||||||||||||||| ||| |||| || ||||| | | |||||  ||||||||||||||||||||| ||||||||||    
T  31588529 atataaatattgacaaatagttttttatttcataaaatgatcattaatttataaatttatgaaacaaaagtaccggtacacctcaatttgtgaggtgtac 31588628  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  31588629 cgtagaagttccc 31588641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 13544203 - 13544093
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||| ||||||| ||| ||||||| | ||| |||  | ||| |||| ||||  |||||||||||||| ||||||    
T  13544203 atataaatattgataaataactctttattttataaaatgatctttaaattatcaatttttggagcagaagtatcggtgtacctcaatttatgaagtgtac 13544104  T
Q  116 tgtagaagttc 126  Q
      |||||||||    
T  13544103 attagaagttc 13544093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 5512729 - 5512672
Alignment:
Q  81 aggagtaccggtacacctcaatttatgaggtgtactgtagaagttcccttctttttga 138  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||| | |||||||    
T  5512729 aggagtaccggtacacctcaatttgtgaggtgtaccgtagaagttcccatatttttga 5512672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 29996813 - 29996904
Alignment:
Q  39 tttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||||||||||||| |||||||| || ||||| | || | || ||||||||||| |||| ||||| ||| |||||| ||||||||||||||    
T  29996813 tttatttcataaaatgatcgttaatttataaatttatagagcaagagtaccggtaaaccttaatttgtgatgtgtaccgtagaagttccctt 29996904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 34901704 - 34901657
Alignment:
Q  81 aggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  34901704 aggagtaccggtacaccccaatttatgaggtgtaccgtagaagttccc 34901657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 7080413 - 7080519
Alignment:
Q  25 ttgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaaca-ggagtaccggtacacctcaatttatgaggtgtactgtagaag 123  Q
    |||| ||||| ||||||| ||| |||||||||| | || || | ||| | | ||||| |||||||||||||||| |||||| |||||||||| |||||||    
T  7080413 ttgacaaatagctctttacttcctaaaataatcatgaatttatcaatttatgaaacaaggagtaccggtacaccccaatttgtgaggtgtaccgtagaag 7080512  T
Q  124 ttccctt 130  Q
    |||||||    
T  7080513 ttccctt 7080519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 9499721 - 9499810
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    |||||||||||||| ||| |||| || ||||| | | || ||| |||| ||||||||||||||||||||||||||| ||||||| ||||||    
T  9499721 ttatttcataaaatgatccttaatttataaatttatgaagcag-agtatcggtacacctcaatttatgaggtgtaccgtagaagctccctt 9499810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 13593368 - 13593281
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||||||||| ||| |||| || ||||| | | |||||| |||| |||||||||||||||| |||||||||| ||||||| ||||    
T  13593368 ttatttcataaaatgatcattaatttataaatttatgaaacag-agtatcggtacacctcaatttgtgaggtgtaccgtagaagctccc 13593281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 36156149 - 36156244
Alignment:
Q  30 aaataactctttatttcataaaata-atcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagtt 125  Q
    |||||||| |||||||||||||||  |||||||  || || || | |||| || ||||||||||||||||||||||| || ||||||||||||||||    
T  36156149 aaataactatttatttcataaaattgatcgttagtttatagatttataaagcaagagtaccggtacacctcaatttacga-gtgtactgtagaagtt 36156244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 16432711 - 16432656
Alignment:
Q  75 taaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    |||| ||||||| ||||||||||||||||||||| |||||| ||| ||||||||||    
T  16432711 taaagcaggagttccggtacacctcaatttatgaagtgtaccgtaaaagttccctt 16432656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 389
Target Start/End: Complemental strand, 36817264 - 36817189
Alignment:
Q  314 catttttataagaattatcaagtatcaaatataaaattcaaatgaaaacatgagtgaagtattatagatttgaaca 389  Q
    |||||| ||| ||||| ||||||||||||||||||||||| |||||||  |||| |||  || |||||||||||||    
T  36817264 cattttcatatgaattttcaagtatcaaatataaaattcatatgaaaatgtgagagaaagatcatagatttgaaca 36817189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 39979669 - 39979752
Alignment:
Q  47 ataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||||| ||| |||| || ||||| | | || ||| |||| |||||||||||||||| |||||||||| ||||||||||||||    
T  39979669 ataaaatgatcattaatttataaatttatgaagcagaagtatcggtacacctcaatttgtgaggtgtaccgtagaagttccctt 39979752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 4039514 - 4039469
Alignment:
Q  83 gagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||    
T  4039514 gagtaccggtacaccttaatttgtgaggtgtaccgtagaagttccc 4039469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 6335710 - 6335797
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||||||||||  || |||| || ||||| | | |||||| |||| |||||||||||||||| |||||||||| ||||||| ||||    
T  6335710 ttatttcataaaatggtctttaatttataaatttatgaaacag-agtatcggtacacctcaatttgtgaggtgtaccgtagaagctccc 6335797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 128
Target Start/End: Original strand, 17069293 - 17069391
Alignment:
Q  30 aaataactctttatttcataaaata-atcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||| |||||||||||||||  |||||||  || || || | | || |||||||||||||||||||||||||| || ||| || ||||||||||||    
T  17069293 aaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaggagtaccggtacacctcaatttacga-gtgcaccgtagaagttccc 17069391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 29960160 - 29960281
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaata--atcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgt 113  Q
    ||||| |||||||||||||  | |||||||||||||| |  |||||||| || ||||  | | ||  | |||||||||||||||||| ||||||| ||||    
T  29960160 atataaatattgataaatagttatttatttcataaaaaacgatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttatga-gtgt 29960258  T
Q  114 actgtagaagttcccttcttttt 136  Q
    || ||| |||||||||| |||||    
T  29960259 accgtaaaagttcccttattttt 29960281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 35162611 - 35162718
Alignment:
Q  22 atattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtaga 121  Q
    ||||| ||||||| || |||||||   ||||| |||||||| || ||||| | | || || |||||||  ||||||| |||||||||||||||  |||||    
T  35162611 atattaataaatagctttttatttttcaaaatgatcgttaatttataaatttatgaagcaagagtaccaatacaccttaatttatgaggtgtaacgtaga 35162710  T
Q  122 agttccct 129  Q
    ||||||||    
T  35162711 agttccct 35162718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 2011142 - 2011053
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    |||||||||||||| ||| |||| || ||||| | | || ||| |||| |||||||||||||||| |||||||||| ||| ||| ||||||    
T  2011142 ttatttcataaaatgatcattaatttataaatttatgaagcag-agtatcggtacacctcaatttgtgaggtgtaccgtaaaagctccctt 2011053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 6260380 - 6260425
Alignment:
Q  83 gagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    |||||||||||||||||| ||||||| |||||| |||||||||||||    
T  6260380 gagtaccggtacacctcattttatga-gtgtaccgtagaagttccct 6260425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 40524128 - 40524082
Alignment:
Q  84 agtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    |||||| ||||||| |||||| |||||||||| ||||||||||||||    
T  40524128 agtaccagtacaccccaatttgtgaggtgtaccgtagaagttccctt 40524082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 41802415 - 41802493
Alignment:
Q  30 aaataactctttatttcat-aaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatg 107  Q
    ||||| ||||||||||||| ||||| || ||||| || ||||| ||||||| | ||||||| |||||||| ||||||||    
T  41802415 aaatagctctttatttcataaaaatgatagttaatttataaatttttaaaataagagtaccagtacaccttaatttatg 41802493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 777260 - 777148
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||  |||| || ||||||| ||||||| ||| |||| || ||||| | |||| |  ||||||| |||||||||||||| |||| |||||    
T  777260 atataaatattgactaatagctttttatttaataaaatgatctttaatttataaatttataaagcgagagtaccagtacacctcaatttgtgagatgtac 777161  T
Q  116 tgtagaagttccc 128  Q
     ||| | ||||||    
T  777160 cgtaaatgttccc 777148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 1368117 - 1368161
Alignment:
Q  84 agtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||||||||||| ||||||| |||||||| ||||||| ||||    
T  1368117 agtaccggtacaccttaatttataaggtgtaccgtagaagatccc 1368161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 62
Target Start/End: Original strand, 8780341 - 8780369
Alignment:
Q  34 aactctttatttcataaaataatcgttaa 62  Q
    |||||||||||||||||||||||||||||    
T  8780341 aactctttatttcataaaataatcgttaa 8780369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 13091221 - 13091320
Alignment:
Q  30 aaataactctttatttcataaaa-taatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||| || |||||||||||||| | || ||||| || ||||| ||| ||  | |||||||||||||||| |||||| | ||||||| ||||||||||||    
T  13091221 aaatagctttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttacg-ggtgtaccgtagaagttccc 13091319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 30753560 - 30753465
Alignment:
Q  16 atatacatattgataaataactctttatttcat--aaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgag 109  Q
    ||||| |||||||||||||||| |||||| |||  ||||| |||||||| || ||||  | ||||  | |||||||||||||||||| ||| ||||    
T  30753560 atataaatattgataaataactatttattacataaaaaatgatcgttaatttataaaattataaagtaagagtaccggtacacctcattttgtgag 30753465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 36410226 - 36410313
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||||||||| ||| |||| || ||||| | |||| || ||||| |||||||||| ||| | |||||||||| ||||||| ||||    
T  36410226 ttatttcataaaatgatcattaatttataaatttataaagca-gagtatcggtacaccttaatatgtgaggtgtaccgtagaagctccc 36410313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 4e-45; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 29698426 - 29698322
Alignment:
Q  24 attgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaag 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||    
T  29698426 attgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaagcaggagtaccggtacacctcaatttgtgaggtgtaccgtagaag 29698327  T
Q  124 ttccc 128  Q
    |||||    
T  29698326 ttccc 29698322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 43903367 - 43903479
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||| ||||||||||||| ||||||||||    
T  43903367 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttgaaggaggagtaccgatacacctcaatttgtgaggtgtac 43903466  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  43903467 cgtagaagttccc 43903479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 32122005 - 32121899
Alignment:
Q  22 atattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtaga 121  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||| ||| |||||||||| |||||    
T  32122005 atattgataaataactttttatttcataaaataatagttaaattgtaaatatttgaagcaggagtaccggtacacctcactttgtgaggtgtaccgtaga 32121906  T
Q  122 agttccc 128  Q
    |||||||    
T  32121905 agttccc 32121899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 52776561 - 52776453
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||| ||| | |||||||||||||||||||||||||||||||||    
T  52776561 atataaatattaataaataattctttatttcataaaataatcgttaaattataaatttttgaaatatgagtaccggtacacctcaatttatgaggtgtac 52776462  T
Q  116 tgtagaagt 124  Q
     ||||||||    
T  52776461 cgtagaagt 52776453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 8353174 - 8353067
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||| || ||| ||||||  ||||||||||||| | ||||||||    
T  8353174 atataaatattgataaataactctttatttcataaaataaccgttaaattataaatatttgaagcagaagtaccaatacacctcaatttgtaaggtgtac 8353075  T
Q  116 tgtagaag 123  Q
     |||||||    
T  8353074 cgtagaag 8353067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 15298323 - 15298210
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||| ||||||||||||||| ||||||||||||||||||| ||||| ||| ||  | ||||||| |||||||||||||||||||||||||    
T  15298323 atataaatattgatgaataactctttattttataaaataatcgttaaattataaat-tttgaagtaagagtaccagtacacctcaatttatgaggtgtac 15298225  T
Q  116 tgtagaagttccctt 130  Q
     |||||||| |||||    
T  15298224 agtagaagtcccctt 15298210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 11510828 - 11510716
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||  |||||||||||||||||||||| |||| ||||| ||| ||  |||||||||||| |||||||||||||||||||||     
T  11510828 atataaatattgataaataacattttatttcataaaataatcgtt-aattataaatttttgaagtaggagtaccggtgcacctcaatttatgaggtgtat 11510730  T
Q  116 tgtagaagttccct 129  Q
     |||||||| ||||    
T  11510729 cgtagaagtcccct 11510716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 49079771 - 49079844
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtacc 89  Q
    ||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||  |||||||||    
T  49079771 atataaatattgatgaataactcattatttcataaaataatcgttaaattataaatttttaaagtaggagtacc 49079844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 4393278 - 4393333
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaat 71  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  4393278 atatatatattgatgaataactctttatttcataaaataatcgttaaattataaat 4393333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 131
Target Start/End: Original strand, 9252161 - 9252262
Alignment:
Q  30 aaataactctttatttcataaaata-atcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||| |||||||||||||||  |||||||| || || |||| | || || ||||||||||||||||||||||| || |||||| ||||||||||||    
T  9252161 aaataactatttatttcataaaattgatcgttaatttatagatatatgaagcaagagtaccggtacacctcaatttacga-gtgtaccgtagaagttccc 9252259  T
Q  129 ttc 131  Q
    |||    
T  9252260 ttc 9252262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 135
Target Start/End: Original strand, 20199667 - 20199761
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttcccttctttt 135  Q
    |||||||||||||| ||| |||| || ||||| | | || ||| |||| |||||||||||||||| |||||||||| ||||||| |||||||||||    
T  20199667 ttatttcataaaatgatccttaatttataaatttatgaagcag-agtatcggtacacctcaatttgtgaggtgtaccgtagaagctcccttctttt 20199761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 35375618 - 35375511
Alignment:
Q  22 atattgataaataactctttatttcata-aaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtag 120  Q
    ||||||| ||||| |||||||||| ||| |||| || ||||| || ||||| | | || || |||||||| ||||||||||||| |||||||||| ||||    
T  35375618 atattgacaaatagctctttatttaatataaatgattgttaatttataaatttatgaatcaagagtaccgatacacctcaatttgtgaggtgtaccgtag 35375519  T
Q  121 aagttccc 128  Q
    ||||||||    
T  35375518 aagttccc 35375511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 48795484 - 48795437
Alignment:
Q  83 gagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||    
T  48795484 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccctt 48795437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 128
Target Start/End: Complemental strand, 31185531 - 31185430
Alignment:
Q  26 tgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagtt 125  Q
    |||||||||||  ||||||||||||||| ||| |||| || ||||| | ||||||| ||||| |||||||||||||||| ||| |||||| ||| ||| |    
T  31185531 tgataaataacaatttatttcataaaatgatcattaatttataaatttataaaaca-gagtatcggtacacctcaatttgtgaagtgtaccgtaaaagct 31185433  T
Q  126 ccc 128  Q
    |||    
T  31185432 ccc 31185430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 27102706 - 27102629
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggta 93  Q
    ||||| ||||| |||||||||| |||||| |||||||| ||| ||||||| ||||| ||||||  |||||||||||||    
T  27102706 atataaatattaataaataactatttattacataaaatgatcattaaattataaatttttaaagtaggagtaccggta 27102629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 29384985 - 29385098
Alignment:
Q  24 attgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaag 123  Q
    ||||| ||||||||  |||||| ||||||| || ||||| || ||||| | |  |  ||||||| |||||||||||||||| |||||||||| ||||||     
T  29384985 attgacaaataactacttattttataaaatgattgttaatttataaatttatgtagaaggagtatcggtacacctcaatttgtgaggtgtaccgtagaaa 29385084  T
Q  124 ttcccttctttttg 137  Q
    ||||||| ||||||    
T  29385085 ttcccttatttttg 29385098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 5335469 - 5335361
Alignment:
Q  22 atattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtaga 121  Q
    ||||||| || ||| ||||||||| ||||||| ||  |||| |||||||| | | || || ||||| |||||||||||||||| |||| ||||| |||||    
T  5335469 atattgacaattaattctttattttataaaatgatatttaacttgtaaatttatgaagcaagagtatcggtacacctcaatttgtgagatgtaccgtaga 5335370  T
Q  122 agttccctt 130  Q
    |||| ||||    
T  5335369 agtttcctt 5335361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 26409743 - 26409628
Alignment:
Q  16 atatacatattgataaataactctttatttcat-aaaataatcgttaaattgtaaatatt-taaaacaggagtaccggtacacctcaatttatgaggtgt 113  Q
    ||||| ||||||| |||||||| |||||||||| ||||| |||||||| || ||||| || | ||||| ||||||||||||||   ||||| ||| ||||    
T  26409743 atataaatattgacaaataactttttatttcataaaaatgatcgttaatttataaattttgtgaaacaagagtaccggtacactaaaatttctga-gtgt 26409645  T
Q  114 actgtagaagttccctt 130  Q
    || ||||||||||||||    
T  26409644 accgtagaagttccctt 26409628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 15804564 - 15804667
Alignment:
Q  24 attgataaataactctttatttcataaaataatcgttaaattg-taaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaa 122  Q
    ||||| |||||||| ||||||||||||||| ||  || ||||  ||||| | |  | |||||||| ||||||||||||||| ||||||||||| ||||||    
T  15804564 attgacaaataactatttatttcataaaatgattttttaatttataaatttatgtagcaggagtatcggtacacctcaattgatgaggtgtaccgtagaa 15804663  T
Q  123 gttc 126  Q
    ||||    
T  15804664 gttc 15804667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 38297229 - 38297276
Alignment:
Q  81 aggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||| |||||||||||||||| | |||||||||||||||||||||    
T  38297229 aggagtatcggtacacctcaatttgtaaggtgtactgtagaagttccc 38297276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 52058561 - 52058514
Alignment:
Q  81 aggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  52058561 aggagtaccggtacaccccaatttgtgaggtgtaccgtagaagttccc 52058514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 8966290 - 8966339
Alignment:
Q  80 caggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||||||||||||||||| ||||||||| |||||| ||||||||||||||    
T  8966290 caggagtaccggtacaccttaatttatga-gtgtaccgtagaagttccctt 8966339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 36789998 - 36789885
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||| |||||||||||   |||||||| ||||| ||| |||| || ||||| | | || ||| |||| |||||||| ||||||||||||||||||    
T  36789998 atataaataatgataaataacaacttatttcaaaaaatgatcattaatttataaatttatgaagcag-agtatcggtacacatcaatttatgaggtgtac 36789900  T
Q  116 tgtagaagttccctt 130  Q
     ||||||| ||||||    
T  36789899 cgtagaagctccctt 36789885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 127
Target Start/End: Complemental strand, 41982437 - 41982391
Alignment:
Q  81 aggagtaccggtacacctcaatttatgaggtgtactgtagaagttcc 127  Q
    ||||||||||||||||| |||||| |||||||||| |||||||||||    
T  41982437 aggagtaccggtacaccccaatttgtgaggtgtaccgtagaagttcc 41982391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 83 - 125
Target Start/End: Original strand, 47175830 - 47175872
Alignment:
Q  83 gagtaccggtacacctcaatttatgaggtgtactgtagaagtt 125  Q
    ||||| ||||||||||||||||||||||||||| |||||||||    
T  47175830 gagtatcggtacacctcaatttatgaggtgtaccgtagaagtt 47175872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 4521356 - 4521268
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    |||| ||||||||| ||| |||| || ||||| | | |||||| |||| |||||||||||||||| |||||||||| ||||||| |||||    
T  4521356 ttatctcataaaatgatcattaatttataaatttatgaaacag-agtatcggtacacctcaatttgtgaggtgtaccgtagaagctccct 4521268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 4817188 - 4817076
Alignment:
Q  16 atatacatattgataaataactctttatttcat-aaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgta 114  Q
    ||||| |||||||||||||||| |||||| ||| ||||| |||||||| || ||||  | ||||  | |||||||||||||||||| ||| ||| |||||    
T  4817188 atataaatattgataaataactatttattacataaaaatgatcgttaatttataaaattataaagtaagagtaccggtacacctcattttgtga-gtgta 4817090  T
Q  115 ctgtagaagttccc 128  Q
    | |||||| |||||    
T  4817089 ccgtagaaattccc 4817076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 14998236 - 14998147
Alignment:
Q  39 tttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||||||||||| ||| |||| || ||||| | || | |  |||||||| |||||| |||||| |||||||||| ||||||||||||    
T  14998236 tttatttcataaaatgatccttaatttataaatttatagagcgagagtaccgatacaccacaatttgtgaggtgtaccgtagaagttccc 14998147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 25480409 - 25480296
Alignment:
Q  17 tatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtact 116  Q
    |||| ||||||| |||||||| ||||||| ||||||| || ||||| || ||||| | | ||  | |||||| ||||||||||||||| | ||||||||     
T  25480409 tataaatattgacaaataactttttattttataaaatgattgttaacttataaatttatgaagtaagagtactggtacacctcaatttgtaaggtgtacc 25480310  T
Q  117 gtagaagttccctt 130  Q
    | ||||| ||||||    
T  25480309 gcagaagctccctt 25480296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 1129242 - 1129128
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaata--atcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgt 113  Q
    ||||| ||||||| ||||| || |||||| ||||||| |  |||||||| || ||||  | | || ||||||||||||||||||||| ||| ||| ||||    
T  1129242 atataaatattgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtga-gtgt 1129144  T
Q  114 actgtagaagttccct 129  Q
    || |||||||||||||    
T  1129143 accgtagaagttccct 1129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 29815487 - 29815535
Alignment:
Q  80 caggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||| | |||||||||||||||| |||||||||| ||||||||||||    
T  29815487 caggagcatcggtacacctcaatttgtgaggtgtaccgtagaagttccc 29815535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 44653465 - 44653586
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaa--taatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgt 113  Q
    ||||| ||||||||||| | || ||||||||||||||  |||||||||| || ||||  | | ||| | |||||||||||||||||| ||| ||| ||||    
T  44653465 atataaatattgataaa-agctatttatttcataaaaaataatcgttaatttataaaattatgaaaaaagagtaccggtacacctcattttgtga-gtgt 44653562  T
Q  114 actgtagaagttcccttctttttg 137  Q
    || |||||||||||| | ||||||    
T  44653563 accgtagaagttcccatatttttg 44653586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 4393510 - 4393549
Alignment:
Q  85 gtaccggtacacctcaatttatgaggtgtactgtagaagt 124  Q
    ||||| ||||||||||||||||||||||||| ||||||||    
T  4393510 gtaccagtacacctcaatttatgaggtgtaccgtagaagt 4393549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 398
Target Start/End: Original strand, 11471873 - 11471939
Alignment:
Q  331 tcaagtatcaaatataaaattcaaatgaaaacatgagtgaagtattatagatttgaacattaagagct 398  Q
    ||||| ||||||| ||||||||| ||||||| |||||||||| || ||||||||||||| ||| ||||    
T  11471873 tcaagcatcaaatctaaaattcatatgaaaa-atgagtgaaggatcatagatttgaacactaaaagct 11471939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 39987401 - 39987351
Alignment:
Q  77 aaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||||||||||||||||||| ||||||| |||| | ||||||||||||    
T  39987401 aaacaggagtaccggtacacctcattttatga-gtgtcccgtagaagttccc 39987351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 52024536 - 52024438
Alignment:
Q  30 aaataactctttatttcataaaata-atcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||| |||||||||||||||  |||||||  || || || | | ||||| ||||||| ||||||||||||||| || |||||| ||||||||||||    
T  52024536 aaataactatttatttcataaaattgatcgttagtttatagatttatgaaacaagagtacctgtacacctcaatttacga-gtgtacagtagaagttccc 52024438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 124
Target Start/End: Complemental strand, 24105192 - 24105154
Alignment:
Q  86 taccggtacacctcaatttatgaggtgtactgtagaagt 124  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  24105192 taccggcacacctcaatttatgaggtgtaccgtagaagt 24105154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 24397703 - 24397792
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    |||||||||||||| ||| |||| || ||||| | | || ||| |||| |||||||||||||||| ||||||||||  |||||| ||||||    
T  24397703 ttatttcataaaatgatcattaatttataaatttatgaagcag-agtatcggtacacctcaatttgtgaggtgtaccatagaagctccctt 24397792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 25834589 - 25834638
Alignment:
Q  80 caggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    |||||||||||||||| |||| ||||||| |||||| ||||||||||||||    
T  25834589 caggagtaccggtacatctcactttatga-gtgtaccgtagaagttccctt 25834638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 40478117 - 40478166
Alignment:
Q  80 caggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||||||||||||||||||| ||| ||| |||||| ||||||||||||||    
T  40478117 caggagtaccggtacacctcactttgtga-gtgtaccgtagaagttccctt 40478166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 54428851 - 54428900
Alignment:
Q  77 aaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttcc 127  Q
    ||||||||||| |||||||||||| ||||||| |||||| |||||||||||    
T  54428851 aaacaggagtatcggtacacctcattttatga-gtgtacagtagaagttcc 54428900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 26457066 - 26456952
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaata--atcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgt 113  Q
    ||||| ||||||| ||||| || |||||| ||||||| |  |||||||| || ||||  | | || ||||||||||||| ||||||| ||||||| ||||    
T  26457066 atataaatattgacaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggttcacctcactttatga-gtgt 26456968  T
Q  114 actgtagaagttccctt 130  Q
    || ||||||||||||||    
T  26456967 ac-gtagaagttccctt 26456952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 396
Target Start/End: Complemental strand, 43332246 - 43332181
Alignment:
Q  331 tcaagtatcaaatataaaattcaaatgaaaacatgagtgaagtattatagatttgaacattaagag 396  Q
    |||| |||||||| |||| |||| |||||||||||||| ||  |  ||||||||||||||||||||    
T  43332246 tcaaatatcaaatctaaatttcatatgaaaacatgagtaaataaccatagatttgaacattaagag 43332181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 51996507 - 51996422
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagtt 125  Q
    |||||||||||||| || ||||| || ||||| | |  |  ||||||| |||||||||||||||| ||| |||||| |||||||||    
T  51996507 ttatttcataaaatgattgttaatttataaatttatgtagtaggagtatcggtacacctcaatttgtgatgtgtaccgtagaagtt 51996422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 3732366 - 3732279
Alignment:
Q  24 attgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtg 112  Q
    ||||| || ||||| ||||||| |||||||  ||||||| |||||| | |||  | || |||||||||||||||||||||| |||||||    
T  3732366 attgacaactaactttttattttataaaatggtcgttaatttgtaatt-tttggagcaagagtaccggtacacctcaatttgtgaggtg 3732279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 62
Target Start/End: Original strand, 7016233 - 7016265
Alignment:
Q  30 aaataactctttatttcataaaataatcgttaa 62  Q
    ||||| |||||||||||||||||||||||||||    
T  7016233 aaatatctctttatttcataaaataatcgttaa 7016265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 37626980 - 37626936
Alignment:
Q  86 taccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||||    
T  37626980 taccggtacgcctcaatttatgaaatgtaccgtagaagttccctt 37626936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 42622929 - 42623016
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||||||||| | ||||||| || ||||| | | ||| | |||||||||||||||||||||| ||| |||||| ||| || |||||    
T  42622929 ttatttcataaaaga-tcgttaatttataaatttatgaaaaaagagtaccggtacacctcaatttgtgaagtgtaccgtaaaatttccc 42623016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 44379461 - 44379414
Alignment:
Q  80 caggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||||||||||||||||| ||| ||| |||||| ||||||||||||    
T  44379461 caggagtaccggtacacctcactttgtga-gtgtaccgtagaagttccc 44379414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 53289277 - 53289230
Alignment:
Q  80 caggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||||||||||||||||| ||| ||| |||||| ||||||||||||    
T  53289277 caggagtaccggtacacctcattttgtga-gtgtaccgtagaagttccc 53289230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 89; Significance: 9e-43; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 214434 - 214546
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||  ||||||||||||||||||    
T  214434 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttgaagcaggagtaccggtacaattcaatttatgaggtgtac 214533  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  214534 cgtagaagttccc 214546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 9e-43; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 19527018 - 19527130
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  19527018 atataaatatggataaataactctttatttcataaaataatcgttaaattgtaaatatttgaagcaggagtaccggtacacctcaatttgtgaggtgtac 19527117  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  19527118 cgtagaagttccc 19527130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 39103649 - 39103539
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  39103649 atataaatattgataaataactctttatttaataaaataatcgttaaattgtaaatatttgaagcaggagtaccggtacacctcaatttgtgaggtgtac 39103550  T
Q  116 tgtagaagttc 126  Q
     ||||||||||    
T  39103549 cgtagaagttc 39103539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 31975844 - 31975956
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||| |||||| |||    
T  31975844 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaagcaggagtaccgatagacctcaatttgtgaggtctac 31975943  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  31975944 cgtagaagttccc 31975956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 53973568 - 53973464
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  53973568 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttgaagcaggagtaccggtacacctcaatttgtgaggtgtac 53973469  T
Q  116 tgtag 120  Q
     ||||    
T  53973468 cgtag 53973464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 12756297 - 12756408
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||| ||||||||||||||||||| ||||||||||    
T  12756297 atataaatattgataaataactctttatttcataaaataattgttaaattgtaaatatttgaagcaggaataccggtacacctcaatttgtgaggtgtac 12756396  T
Q  116 tgtagaagttcc 127  Q
     |||||||||||    
T  12756397 cgtagaagttcc 12756408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 49286794 - 49286687
Alignment:
Q  22 atattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtaga 121  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||| |||||||||| |||||    
T  49286794 atattaataaataactctttatttcataaaataatcgttaaattgtaaatatttgaagtaggagtaccggtacacctcaatttgtgaggtgtaccgtaga 49286695  T
Q  122 agttccct 129  Q
    || |||||    
T  49286694 agctccct 49286687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 34584294 - 34584180
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| || | |||||| |||||||||||||||| ||||||||||    
T  34584294 atataaatatttataaataactctttatttcataaaataatcgttaaattataaatttttgaagctggagtatcggtacacctcaatttgtgaggtgtac 34584195  T
Q  116 tgtagaagttccctt 130  Q
     ||||||||||||||    
T  34584194 cgtagaagttccctt 34584180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 34927214 - 34927100
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||   ||||||| | ||||||||||||| ||||||||||    
T  34927214 atataaatattgataaataactctttatttcataaagtaatcgttaaattgtaaatatttgaagatggagtactgatacacctcaatttgtgaggtgtac 34927115  T
Q  116 tgtagaagttccctt 130  Q
     ||||||||||||||    
T  34927114 cgtagaagttccctt 34927100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 19595226 - 19595339
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| | |||||||||||||| | ||||||||    
T  19595226 atataaatattaataaataactctttatttcataaaataatcattaaattgtaaatatttgaagcaggagtatcagtacacctcaatttgtaaggtgtac 19595325  T
Q  116 tgtagaagttccct 129  Q
     |||||||||||||    
T  19595326 cgtagaagttccct 19595339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 39953697 - 39953609
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaattt 104  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||    
T  39953697 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttgaagcagaagtaccggtacacctcaattt 39953609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 43349178 - 43349090
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaattt 104  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||    
T  43349178 atataaatattgataaataactctttatttcataaaataatcgttaaattataaatatttgaagcaggagtaccggtacacctcaattt 43349090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 22077661 - 22077774
Alignment:
Q  17 tatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtact 116  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| || |||||||||||||||||||||    |||||||||||     
T  22077661 tataaatattgataaataactctttatttcataaaatgatcgttaaattataaatttttgaagcaggagtaccggtacacctcacaaaatgaggtgtacc 22077760  T
Q  117 gtagaagttccctt 130  Q
    ||||||||||||||    
T  22077761 gtagaagttccctt 22077774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 31296642 - 31296530
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||| | || || |||||||||||||||||||||| |||||||| |    
T  31296642 atataaatattgataaataactatttatttcataaaataatcattaaattgtaaatatgtgaagcatgagtaccggtacacctcaatttgtgaggtgtcc 31296543  T
Q  116 tgtagaagttccc 128  Q
     ||| ||||||||    
T  31296542 cgtaaaagttccc 31296530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 4695614 - 4695714
Alignment:
Q  28 ataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttcc 127  Q
    |||||||||||||||||||||||||| ||| ||||||| | ||| ||| |||||||||||||||| ||||||||||||||||||||||  ||||||||||    
T  4695614 ataaataactctttatttcataaaatgatctttaaattatcaatttttgaaacaggagtaccggtgcacctcaatttatgaggtgtaccctagaagttcc 4695713  T
Q  128 c 128  Q
    |    
T  4695714 c 4695714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 9579776 - 9579668
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||| ||| ||  ||||||||| ||||| |||||||||||||||||||    
T  9579776 atataaatattgatgaataactctttatttcataaaataattgttaaattataaatttttgaagtaggagtaccagtacaactcaatttatgaggtgtac 9579677  T
Q  116 tgtagaagt 124  Q
     ||||||||    
T  9579676 cgtagaagt 9579668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 9585471 - 9585363
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||| ||| ||  ||||||||| ||||| |||||||||||||||||||    
T  9585471 atataaatattgatgaataactctttatttcataaaataattgttaaattataaatttttgaagtaggagtaccagtacaactcaatttatgaggtgtac 9585372  T
Q  116 tgtagaagt 124  Q
     ||||||||    
T  9585371 cgtagaagt 9585363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 52940775 - 52940883
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||| ||| ||  | || |||||||||||||||||||||| |||||||    
T  52940775 atataaatatcgataaataactctttatttcataaaataatccttaaattctaaatttttgaagtaagaataccggtacacctcaatttatgtggtgtac 52940874  T
Q  116 tgtagaagt 124  Q
     ||||||||    
T  52940875 cgtagaagt 52940883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 15060855 - 15060961
Alignment:
Q  22 atattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtaga 121  Q
    |||||||||||||||||||||||| ||||||| ||  ||||||| | ||| ||| || ||||||||||| | |||||||||||||||| ||||| |||||    
T  15060855 atattgataaataactctttattttataaaatgatttttaaattatcaatttttgaagcaggagtaccgatgcacctcaatttatgagatgtaccgtaga 15060954  T
Q  122 agttccc 128  Q
    |||||||    
T  15060955 agttccc 15060961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 27950370 - 27950256
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||  ||||||| ||||||||||||||| ||| |||| || ||||| | || |||  |||||||||||||||||||||| ||||||||||    
T  27950370 atataaatattgactaataactttttatttcataaaatgatccttaatttataaatttatagaacgagagtaccggtacacctcaatttgtgaggtgtac 27950271  T
Q  116 tgtagaagttccctt 130  Q
     ||||||||||||||    
T  27950270 cgtagaagttccctt 27950256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 32570668 - 32570774
Alignment:
Q  22 atattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtaga 121  Q
    ||||||| ||||| || ||||||||||||||| |||||||| || ||||| | | ||  | |||||||||||||||||||||| |||||||||| |||||    
T  32570668 atattgacaaatacctatttatttcataaaatgatcgttaatttataaatttatgaagtaagagtaccggtacacctcaatttgtgaggtgtaccgtaga 32570767  T
Q  122 agttccc 128  Q
    |||||||    
T  32570768 agttccc 32570774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 128
Target Start/End: Complemental strand, 595401 - 595296
Alignment:
Q  23 tattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaa 122  Q
    ||||||| ||||||| ||||||| |||||||   ||||||||| ||||| ||| ||  |||||||||||||||||||||||| |||||||||| ||||||    
T  595401 tattgatgaataactttttattttataaaatggccgttaaattataaatttttgaagtaggagtaccggtacacctcaatttgtgaggtgtaccgtagaa 595302  T
Q  123 gttccc 128  Q
     |||||    
T  595301 attccc 595296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 40438749 - 40438689
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatattta 76  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40438749 atataaatatttataaataactctttattttataaaataatcgttaaattgtaaatattta 40438689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 4491205 - 4491263
Alignment:
Q  71 tatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4491205 tatttgaaccaggagtaccggtacacctcaatttatgaggtgtaccgtagaagttccct 4491263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 124
Target Start/End: Complemental strand, 25607796 - 25607694
Alignment:
Q  22 atattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtaga 121  Q
    ||||||| ||||| || |||||||||||||||||||||||| || ||||| | | ||    |||||||||||||||||||||| |||||||||| |||||    
T  25607796 atattgacaaatacctatttatttcataaaataatcgttaatttataaatttatgaagtgagagtaccggtacacctcaatttgtgaggtgtaccgtaga 25607697  T
Q  122 agt 124  Q
    |||    
T  25607696 agt 25607694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 44957030 - 44956976
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaa 70  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44957030 atataaatattgataaataactctttatttcataaaataatcgttaaattttaaa 44956976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 13548503 - 13548403
Alignment:
Q  30 aaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    ||||| |||||||||||||||||| |||||||| |||||||| | | ||| | ||||| |||||||| | || |||||| ||||| ||||||||||||||    
T  13548503 aaatagctctttatttcataaaatcatcgttaatttgtaaatttattaaataagagtatcggtacactttaaattatgaagtgtagtgtagaagttccct 13548404  T
Q  130 t 130  Q
    |    
T  13548403 t 13548403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 18052048 - 18051993
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaat 71  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  18052048 atatatatattgatgaataactctttatttcataaaataatcgttaaattataaat 18051993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 21424444 - 21424550
Alignment:
Q  24 attgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaag 123  Q
    |||||||||||||| |||||||||||||||||||||||| || | ||| | | ||  | ||||||||||||| |||| ||| | || ||||| |||||||    
T  21424444 attgataaataactttttatttcataaaataatcgttaatttatcaatttatgaagtaagagtaccggtacatctcattttgttagatgtaccgtagaag 21424543  T
Q  124 ttccctt 130  Q
    |||||||    
T  21424544 ttccctt 21424550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 42 - 128
Target Start/End: Complemental strand, 24566453 - 24566367
Alignment:
Q  42 atttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||||||||||| ||||| || | ||| | ||||||| |||||||||||||||||| ||| | |||||||| ||||||||||||    
T  24566453 atttcataaaataattgttaatttatcaatttataaaacaagagtaccggtacacctcattttgttaggtgtaccgtagaagttccc 24566367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 30168202 - 30168101
Alignment:
Q  24 attgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaag 123  Q
    ||||| ||||||||  |||||||||||||| || ||||| || ||||||| |  | |||||||| |||||||| ||||||| |||||||||| |||||||    
T  30168202 attgacaaataactacttatttcataaaatgattgttaatttataaatatatgtagcaggagtatcggtacacttcaatttgtgaggtgtaccgtagaag 30168103  T
Q  124 tt 125  Q
    ||    
T  30168102 tt 30168101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 39412273 - 39412169
Alignment:
Q  24 attgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaag 123  Q
    |||||||||||||| ||||||| ||||||| || ||||| || ||||| | |  | |||||||| |||||||||| ||||| |||||||||| ||||||     
T  39412273 attgataaataactatttattttataaaatgattgttaatttataaatttatgtagcaggagtatcggtacaccttaatttgtgaggtgtaccgtagaaa 39412174  T
Q  124 ttccc 128  Q
    |||||    
T  39412173 ttccc 39412169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 3690830 - 3690919
Alignment:
Q  40 ttatttcataaaataatcgttaaattg-taaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||||||||||||||||||||||  ||||| | | ||  |||| || || ||||||||||||| |||||||||| ||||||||||||    
T  3690830 ttatttcataaaataatcgttaaatttataaatttatgaagtaggaatatcgatacacctcaatttgtgaggtgtaccgtagaagttccc 3690919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 22789629 - 22789580
Alignment:
Q  81 aggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  22789629 aggagtaccggtacaccccaatttgtgaggtgtaccgtagaagttccctt 22789580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 52324070 - 52323966
Alignment:
Q  24 attgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaag 123  Q
    ||||| ||||||||  |||||||||||||| || || || || ||||| | |  | |||||||| |||||||||||||||| |||||||||| | |||||    
T  52324070 attgacaaataactacttatttcataaaatgattgtaaatttataaatttatgtagcaggagtatcggtacacctcaatttgtgaggtgtaccgcagaag 52323971  T
Q  124 ttccc 128  Q
    |||||    
T  52323970 ttccc 52323966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 105
Target Start/End: Complemental strand, 34791981 - 34791902
Alignment:
Q  27 gataaataactctttatttcataaaa-taatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaattta 105  Q
    |||||||| ||||||||| ||||||| | |||||||| |||||||| | | ||||||| |||||||||||||| ||||||    
T  34791981 gataaatatctctttattacataaaaattatcgttaacttgtaaatttatgaaacaggtgtaccggtacaccttaattta 34791902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 45063341 - 45063238
Alignment:
Q  24 attgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaag 123  Q
    ||||||||||| || |||||||||||||||||||||||| || ||||| | | |  || ||||| | |||||||||| ||| | |||||||| ||| |||    
T  45063341 attgataaatagctttttatttcataaaataatcgttaatttataaatttatgatgcaagagtatcagtacacctcattttgttaggtgtacagtataag 45063242  T
Q  124 ttcc 127  Q
    ||||    
T  45063241 ttcc 45063238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 6807090 - 6806985
Alignment:
Q  24 attgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaag 123  Q
    ||||| ||||||||  |||||||||||||| || ||||| || ||||| | |  | |||||||| | ||||||||||||||   |||||||| |||||||    
T  6807090 attgacaaataactacttatttcataaaatgattgttaatttataaatttatgtatcaggagtatccgtacacctcaatttgcaaggtgtaccgtagaag 6806991  T
Q  124 ttccct 129  Q
    ||||||    
T  6806990 ttccct 6806985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 15033718 - 15033755
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaat 53  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  15033718 atataaatattgataaataactctttatttcataaaat 15033755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 21722552 - 21722601
Alignment:
Q  81 aggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||||| ||||||||| |||||| |||||||||| ||||||||||||||    
T  21722552 aggagtatcggtacaccccaatttgtgaggtgtaccgtagaagttccctt 21722601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 4491168 - 4491203
Alignment:
Q  16 atatacatattgataaataactctttatttcataaa 51  Q
    ||||| ||||||||||||||||||||||||||||||    
T  4491168 atataaatattgataaataactctttatttcataaa 4491203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 18051817 - 18051778
Alignment:
Q  85 gtaccggtacacctcaatttatgaggtgtactgtagaagt 124  Q
    ||||| ||||||||||||||||||||||||| ||||||||    
T  18051817 gtaccagtacacctcaatttatgaggtgtaccgtagaagt 18051778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 325 - 372
Target Start/End: Complemental strand, 31310779 - 31310732
Alignment:
Q  325 gaattatcaagtatcaaatataaaattcaaatgaaaacatgagtgaag 372  Q
    ||||| |||||||| |||| ||||||||| ||||||||||||||||||    
T  31310779 gaattttcaagtattaaatctaaaattcatatgaaaacatgagtgaag 31310732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 30 - 128
Target Start/End: Original strand, 46663634 - 46663732
Alignment:
Q  30 aaataactctttatttcataaaata-atcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||| |||||||||||||||  ||| |||| || || || | | || || ||||||||||||||||||||||| || |||||| ||||||||||||    
T  46663634 aaataactatttatttcataaaattgatcattaatttatagatttatgaagcaagagtaccggtacacctcaatttacga-gtgtaccgtagaagttccc 46663732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 48207439 - 48207486
Alignment:
Q  83 gagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||| |||||||||||||||| |||||||||| ||||||| ||||||    
T  48207439 gagtatcggtacacctcaatttgtgaggtgtaccgtagaagctccctt 48207486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 5474092 - 5474011
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaa 122  Q
    |||||||||||||| ||| |||| || ||||| | | || ||| |||| |||||||| ||||||| |||||||||||||||||    
T  5474092 ttatttcataaaatgatcattaatttataaatttatgaagcag-agtatcggtacacatcaatttgtgaggtgtactgtagaa 5474011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 398
Target Start/End: Original strand, 30534618 - 30534700
Alignment:
Q  316 tttttataagaattatcaagtatcaaatataaaattcaaatgaaaacatgagtgaagtattatagatttgaacattaagagct 398  Q
    |||| ||| ||||| ||||| ||||||| ||||||| | |||||||||||||||||| |  | |||||||||||  |||||||    
T  30534618 ttttcatatgaattttcaagcatcaaatctaaaatttatatgaaaacatgagtgaaggacaacagatttgaacacgaagagct 30534700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 42680711 - 42680629
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaa-taatcgttaaattgtaaatatt-taaaacaggagtaccggtacac 96  Q
    ||||| ||||||| ||||| || |||||||||||||| | |||||||| || ||||| || ||||||| ||||||||||||||    
T  42680711 atataaatattgacaaatagctttttatttcataaaagtgatcgttaatttataaattttgtaaaacaagagtaccggtacac 42680629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 50189375 - 50189420
Alignment:
Q  83 gagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    |||||| |||||||||||||||| ||| |||||||||||||||||||    
T  50189375 gagtactggtacacctcaatttacgag-tgtactgtagaagttccct 50189420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 54178781 - 54178827
Alignment:
Q  83 gagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    ||||| |||||||||||||||| |||||||||| ||||||| |||||    
T  54178781 gagtatcggtacacctcaatttgtgaggtgtaccgtagaagctccct 54178827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 398
Target Start/End: Complemental strand, 44564308 - 44564243
Alignment:
Q  333 aagtatcaaatataaaattcaaatgaaaacatgagtgaagtattatagatttgaacattaagagct 398  Q
    ||||||| ||| ||||| ||| || |||| |||| ||||| ||||||||||| |||||||||||||    
T  44564308 aagtatccaatctaaaaatcatataaaaatatgattgaaggattatagatttaaacattaagagct 44564243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Original strand, 56303166 - 56303242
Alignment:
Q  49 aaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttc 126  Q
    ||||| |||||||| || ||||  | |||| ||||||||||||||||||||| ||||||| ||||||  |||||||||    
T  56303166 aaaattatcgttaatttataaaattataaagcaggagtaccggtacacctcactttatga-gtgtaccatagaagttc 56303242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 126937 - 126984
Alignment:
Q  80 caggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||||||| ||||||||| ||||||| |||||| ||||||||||||    
T  126937 caggagtaccgatacacctcattttatga-gtgtaccgtagaagttccc 126984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 1857163 - 1857210
Alignment:
Q  80 caggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||||||||||||||||| ||| ||| |||||| ||||||||||||    
T  1857163 caggagtaccggtacacctcattttgtga-gtgtaccgtagaagttccc 1857210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 116
Target Start/End: Original strand, 19627950 - 19627982
Alignment:
Q  84 agtaccggtacacctcaatttatgaggtgtact 116  Q
    |||||||||||||||||||||||||||| ||||    
T  19627950 agtaccggtacacctcaatttatgaggtatact 19627982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 29582329 - 29582372
Alignment:
Q  84 agtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||    
T  29582329 agtaccggtacacctcaatttgtga-gtgtaccgtagaagttccc 29582372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 38764850 - 38764736
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||| | ||||||||    
T  38764850 atataaatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttgaagcaggagtaccgatacacctcaatttgtaaggtgtac 38764751  T
Q  116 tgtagaagttccctt 130  Q
     ||||||||||||||    
T  38764750 cgtagaagttccctt 38764736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 31893445 - 31893333
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||| |||||||||||||||| |||||||||     
T  31893445 atataaatattgataaataactctttatttcataaaatgatcgttaaattataaatttttgaaacaggagtatcggtacacctcaatttgtgaggtgtaa 31893346  T
Q  116 tgtagaagttccc 128  Q
     ||||||||||||    
T  31893345 cgtagaagttccc 31893333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 7886171 - 7886259
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaattt 104  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||    
T  7886171 atataaatattgataaataactctttattttataaaataatcgttaaattgtaaatatttgaagcaggagtaccgatacacctcaattt 7886259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 42165019 - 42164906
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||  | ||||| ||||||||||||||||||||||||| |    
T  42165019 atataaatattgataaataattctttatttcataaaataatcgttaaattataaatttttaaagtatgagtatcggtacacctcaatttatgaggtgt-c 42164921  T
Q  116 tgtagaagttccctt 130  Q
     |||||||| |||||    
T  42164920 agtagaagtcccctt 42164906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 6804120 - 6804021
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||| ||||||||| ||||||||||||||| || |||||||| ||||| ||| || || |||||||||||||||||||||||||||||||||    
T  6804120 atataaatattgttaaataactttttatttcataaaatgattgttaaattataaatttttgaatcaagagtaccggtacacctcaatttatgaggtgtac 6804021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 12107596 - 12107490
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||| ||||||||||||||||| ||||||||||| |||||| || ||||| ||| ||  ||||||||||||||||||||||||||||| |||||    
T  12107596 atataaatatcgataaataactctttatctcataaaataaccgttaagttataaatttttgaagtaggagtaccggtacacctcaatttatgagatgtac 12107497  T
Q  116 tgtagaa 122  Q
     ||||||    
T  12107496 cgtagaa 12107490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 27970306 - 27970410
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||||| ||| ||  | ||||||||||||||||||||||||| |||||||    
T  27970306 atataaatatcgataaataactctttatttcataaaataatccttaaattataaatttttgaagta-gagtaccggtacacctcaatttatgtggtgtac 27970404  T
Q  116 tgtaga 121  Q
     |||||    
T  27970405 cgtaga 27970410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 35754570 - 35754465
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||| | ||||| ||| ||  |||||||||| ||||||| |||||||||| |||||    
T  35754570 atataaatatttataaataactctttatttcataaaataatcgttaaa-tataaatttttgaagtaggagtaccgatacaccttaatttatgagatgtac 35754472  T
Q  116 tgtagaa 122  Q
     ||||||    
T  35754471 cgtagaa 35754465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 24 - 129
Target Start/End: Complemental strand, 9008141 - 9008036
Alignment:
Q  24 attgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaag 123  Q
    |||||||||||||| |||||||||||||||||||||||| || | ||| | | ||||| |||||||||||||||||| ||| | |||||| || ||||||    
T  9008141 attgataaataactttttatttcataaaataatcgttaatttatcaatttatgaaacaagagtaccggtacacctcattttgttaggtgtgctttagaag 9008042  T
Q  124 ttccct 129  Q
    ||||||    
T  9008041 ttccct 9008036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 30777369 - 30777274
Alignment:
Q  31 aataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttc 126  Q
    |||||||  |||||||||||||| |||||||| |  ||||| | |||| |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  30777369 aataactacttatttcataaaatgatcgttaattcataaatttataaagcaggagtatcggtacacctcaatttatgaggtgtaccgtagaagttc 30777274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 29107664 - 29107590
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccg 90  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||  ||||||||||    
T  29107664 atataaatattgataaataactctttattttataaaataatcgttaaattataaatatttgaagtaggagtaccg 29107590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 28885999 - 28886087
Alignment:
Q  39 tttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttcc 127  Q
    ||||||||||||||||||| |||| || ||||| | || |||  ||||| |||||||||||||||| |||||||||| |||||||||||    
T  28885999 tttatttcataaaataatccttaatttataaatttatagaacgagagtatcggtacacctcaatttgtgaggtgtaccgtagaagttcc 28886087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 12801400 - 12801507
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||  |||| || ||||||||||||||| ||| |||| || ||||| | || | |  |||||||||||||||||||||||||||||||||    
T  12801400 atataaatattgactaatagctttttatttcataaaatgatctttaatttataaatttatagagcgagagtaccggtacacctcaatttatgaggtgtac 12801499  T
Q  116 tgtagaag 123  Q
     |||||||    
T  12801500 cgtagaag 12801507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 98
Target Start/End: Complemental strand, 34047528 - 34047446
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacct 98  Q
    ||||| ||||| |||||||||| ||||||| ||||||||||||||||||| ||||| ||| ||  || |||||||||||||||    
T  34047528 atataaatattaataaataactttttattttataaaataatcgttaaattataaatttttgaagtagaagtaccggtacacct 34047446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 5215410 - 5215321
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    |||||| |||||||||||||||| || ||||| | | ||| |||| || ||||||| |||||||| |||||||||| |||||||||||||    
T  5215410 ttattttataaaataatcgttaatttataaatttatgaaataggaatatcggtacatctcaatttgtgaggtgtaccgtagaagttccct 5215321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 32887713 - 32887665
Alignment:
Q  81 aggagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  32887713 aggagtaccggtacacctcaatttatgagatgtaccgtagaagttccct 32887665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 2880042 - 2879936
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||| |||||||||||   |||||||| ||||| ||| |||| || ||||| | | |||||| |||| |||||||||||||||||||||||||||    
T  2880042 atataaataatgataaataacaacttatttcaaaaaatgatcattaacttataaatttatgaaacag-agtatcggtacacctcaatttatgaggtgtac 2879944  T
Q  116 tgtagaag 123  Q
     |||||||    
T  2879943 cgtagaag 2879936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 12632952 - 12632901
Alignment:
Q  80 caggagtaccggtacacctcaatttatgaggtgtactgtagaagttcccttc 131  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||||||    
T  12632952 caggagtatcggtacacctcaatttgtgaggtgtaccgtagaagttcccttc 12632901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 23870315 - 23870266
Alignment:
Q  81 aggagtaccggtacacctcaatttatgaggtgtactgtagaagttccctt 130  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||||    
T  23870315 aggagtaccggtacaccccaatttgtgaggtgtaccgtagaagttccctt 23870266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 5273345 - 5273456
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| ||| |||||||||||   |||||||| ||||||||| |||| || ||||| | | || ||| |||  |||||||||||||||||||||||||||    
T  5273345 atataaataatgataaataacaacttatttcaaaaaataatcattaatttataaatttatgaagcag-agtctcggtacacctcaatttatgaggtgtac 5273443  T
Q  116 tgtagaagttccc 128  Q
     ||||||| ||||    
T  5273444 cgtagaagctccc 5273456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 37218896 - 37219013
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaat----ttatgaggt 111  Q
    ||||| ||||||| |||||||   ||| |||||||||||||| |||| || ||||| | | || |||||||| | ||||||||||||    |||||||||    
T  37218896 atataaatattgacaaataacaacttaattcataaaataatcattaatttataaatttatgaagcaggagtatcagtacacctcaatttaattatgaggt 37218995  T
Q  112 gtactgtagaagttccct 129  Q
    |||| |||||||||||||    
T  37218996 gtaccgtagaagttccct 37219013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 463939 - 463838
Alignment:
Q  24 attgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaag 123  Q
    ||||| |||||||| ||||||| |||||||  ||||||| |||||| | | |  || | |||||||| ||||||||||||||||| |||||| ||| |||    
T  463939 attgacaaataactttttattttataaaatggtcgttaatttgtaattttatggaataagagtaccgatacacctcaatttatgaagtgtaccgtaaaag 463840  T
Q  124 tt 125  Q
    ||    
T  463839 tt 463838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 39722249 - 39722358
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| || ||||||||||||| |||| ||| || ||| |||| ||| || | ||| | | || || ||||||  |||||||||||||||||||||||||    
T  39722249 atataaattttgataaataactttttacttcctagaatgatcgataatttatcaatttattaagcaagagtactagtacacctcaatttatgaggtgtac 39722348  T
Q  116 tgtagaagtt 125  Q
     |||||||||    
T  39722349 cgtagaagtt 39722358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 9508904 - 9508856
Alignment:
Q  81 aggagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    |||||||||||||||||  ||||| |||||||||| |||||||||||||    
T  9508904 aggagtaccggtacaccctaatttgtgaggtgtaccgtagaagttccct 9508856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 41639 - 41592
Alignment:
Q  81 aggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||||||||||||| |||||| |||||||||| |||||| |||||    
T  41639 aggagtaccggtacaccccaatttgtgaggtgtaccgtagaaattccc 41592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 29265702 - 29265589
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaata--atcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgt 113  Q
    ||||| || ||||||||||  | |||||||||||||| |  |||||||| || ||||  | | ||||| |||||||||||||||||| ||| ||| ||||    
T  29265702 atataaatgttgataaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaaacaagagtaccggtacacctcactttgtga-gtgt 29265604  T
Q  114 actgtagaagttccc 128  Q
    || ||||||||||||    
T  29265603 acagtagaagttccc 29265589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 129
Target Start/End: Complemental strand, 34057874 - 34057828
Alignment:
Q  83 gagtaccggtacacctcaatttatgaggtgtactgtagaagttccct 129  Q
    ||||| || |||||||||||||||||||||||| ||||||| |||||    
T  34057874 gagtatcgatacacctcaatttatgaggtgtaccgtagaagctccct 34057828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 34520930 - 34520975
Alignment:
Q  81 aggagtaccggtacacctcaatttatgaggtgtactgtagaagttc 126  Q
    ||||||| || ||||||||||||| |||||||||| ||||||||||    
T  34520930 aggagtatcgatacacctcaatttgtgaggtgtaccgtagaagttc 34520975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 2666809 - 2666909
Alignment:
Q  23 tattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaa 122  Q
    |||||| ||||||||  |||||||| ||||| ||||||||  | ||||| | | ||| | ||||| || |||| ||||||||||||||||||| ||||||    
T  2666809 tattgacaaataactacttatttca-aaaatgatcgttaa--tataaatttatgaaatacgagtatcgatacatctcaatttatgaggtgtaccgtagaa 2666905  T
Q  123 gttc 126  Q
    ||||    
T  2666906 gttc 2666909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 5982271 - 5982184
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||||||||| ||| |||| || ||||| | | || ||| |||| ||||||||||||| || |||||||||| ||||||| ||||    
T  5982271 ttatttcataaaatgatcattaatttataaatttatgaagcag-agtatcggtacacctcaacttgtgaggtgtaccgtagaagctccc 5982184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 32238244 - 32238323
Alignment:
Q  30 aaataactctttatttcataaaa-taatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgag 109  Q
    |||||||| |||||||||||||| | |||||||| || ||||| |  |||||| |||||||  ||||||||||||||||||    
T  32238244 aaataact-tttatttcataaaaatgatcgttaatttataaatttagaaaacaagagtaccaatacacctcaatttatgag 32238323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 44637008 - 44636921
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    |||||||||||||| ||| |||| || ||||| | | || ||| | || |||||||||||||||| |||||||||| ||||||| ||||    
T  44637008 ttatttcataaaatgatcattaatttataaatttatgaagcagaa-tatcggtacacctcaatttgtgaggtgtaccgtagaagctccc 44636921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 10948 - 11059
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtac 115  Q
    ||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||| || ||| |||| |||||||||||||||| ||||||||||    
T  10948 atataaatattgataaataaat-tttatttcataaaataatcgttaaattgtaaatatttgaagcagtagtatcggtacacctcaatttgtgaggtgtac 11046  T
Q  116 tgtagaagttccc 128  Q
     | ||||||||||    
T  11047 cgcagaagttccc 11059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 38276 - 38359
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctc 99  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  | |||||||||||||||||    
T  38276 atataaatattgataaataactctttatttcattaaataatcgttaaattgtaaatatttaaagtaagagtaccggtacacctc 38359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0721 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0721
Description:

Target: scaffold0721; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 6693 - 6585
Alignment:
Q  22 atattgataaataactctttatttcataaaataatcgttaaattgt-aaatatttaaaacaggagtaccggtacacctcaa-tttatgaggtgtactgta 119  Q
    |||||||||||||||||||||||| ||||||| ||  ||||||| | || | ||| || ||||||||||| | |||||||| |||||||| ||||| |||    
T  6693 atattgataaataactctttattttataaaatgatttttaaattatcaattttttgaagcaggagtaccgatgcacctcaattttatgagatgtaccgta 6594  T
Q  120 gaagttccc 128  Q
    |||||||||    
T  6593 gaagttccc 6585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0271 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0271
Description:

Target: scaffold0271; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 17020 - 17067
Alignment:
Q  81 aggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||||||    
T  17020 aggagtatcggtacacctcaatttgtgaggtgtaccgtagaagttccc 17067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 1301 - 1220
Alignment:
Q  40 ttatttcataaaataatcgttaaattgtaaatatttaaaacaggagtaccggtacacctcaatttatgaggtgtactgtagaa 122  Q
    |||||||||||||||||| |||| || ||||| | | || ||| |||| |||||||||||||||||| |||||||| ||||||    
T  1301 ttatttcataaaataatcattaatttataaatttatgaagcag-agtatcggtacacctcaatttataaggtgtaccgtagaa 1220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0841 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0841
Description:

Target: scaffold0841; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 3157 - 3117
Alignment:
Q  31 aataactctttatttcataaaataatcgttaaattgtaaat 71  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  3157 aataactctttattttataaaataatcgttaaattataaat 3117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 44 - 91
Alignment:
Q  80 caggagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 128  Q
    ||||||||||||||||||||| ||| ||| |||||| ||||||||||||    
T  44 caggagtaccggtacacctcactttgtga-gtgtaccgtagaagttccc 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 41750 - 41790
Alignment:
Q  82 ggagtaccggtacacctcaatttatgaggtgtactgtagaa 122  Q
    |||||| || |||||||||||||||||||||||| ||||||    
T  41750 ggagtatcgatacacctcaatttatgaggtgtaccgtagaa 41790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 271082 - 271046
Alignment:
Q  16 atatacatattgataaataactctttatttcataaaa 52  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  271082 atataaatattgacaaataactctttatttcataaaa 271046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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