View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17822_high_1 (Length: 855)
Name: NF17822_high_1
Description: NF17822
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17822_high_1 |
 | |
|
| [»] scaffold0692 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 661; Significance: 0; HSPs: 25)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 661; E-Value: 0
Query Start/End: Original strand, 142 - 839
Target Start/End: Original strand, 10652040 - 10652737
Alignment:
| Q |
142 |
gaaagtacctggaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatg |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10652040 |
gaaagtacctggaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatg |
10652139 |
T |
|
| Q |
242 |
ccaaaatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggt |
341 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10652140 |
ccaaaatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggt |
10652239 |
T |
|
| Q |
342 |
aatgtaatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctggatgtagccattg |
441 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10652240 |
aatgtaatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctggatgtagccattg |
10652339 |
T |
|
| Q |
442 |
ttctaggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaattt |
541 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10652340 |
ttctaggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaattt |
10652439 |
T |
|
| Q |
542 |
ctatgcctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatctt |
641 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
10652440 |
ctatgcctcatattttttagtgcattacattcaacaacgaagctcttgtgagatccctttttttgaaggttcaggacctttatggcaacaactttatctt |
10652539 |
T |
|
| Q |
642 |
ctgatgcaagatttcctttgtacacagaaccaaaacttcctaatgcaaccaggtttctagcagaaaatccatcagttccttggtgaaggtctttgtatga |
741 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10652540 |
ctgatgcaagatttcctttgtacacagaaccaaaacttcctaatccaaccaggtttctagcagaaaatccatcagttccttggtgaaggtctttgtatga |
10652639 |
T |
|
| Q |
742 |
aaccctagcaagcgggtcaattattggtagatcatacaattgtttcttgtttcttttcctcatttggtagatagttagaataattgtcaccatgagaa |
839 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10652640 |
aaccctagcaagcgggtcaattattggtagatcatacaattgtttcttgtttcttttcctcatttggtagatagttagaataattgtcaccatgagaa |
10652737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 509; E-Value: 0
Query Start/End: Original strand, 142 - 831
Target Start/End: Original strand, 10659923 - 10660612
Alignment:
| Q |
142 |
gaaagtacctggaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatg |
241 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10659923 |
gaaaatacctggaggagcatagccaacagtccctttaattccaattgtactaaattccttgtgagaggtatcgtcaatggctgagacaagtcttgctatg |
10660022 |
T |
|
| Q |
242 |
ccaaaatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggt |
341 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
10660023 |
ccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcgtgatgaaggt |
10660122 |
T |
|
| Q |
342 |
aatgtaatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctggatgtagccattg |
441 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10660123 |
aatgtaatacactagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacaatctttgaatccctgcattcattatacctggatgtagccattg |
10660222 |
T |
|
| Q |
442 |
ttctaggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaattt |
541 |
Q |
| |
|
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
10660223 |
ttctaggcttccattgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatctgtacttgaacaacatgtcaaaaccttgaccaaattt |
10660322 |
T |
|
| Q |
542 |
ctatgcctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatctt |
641 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| |
|
|
| T |
10660323 |
ctatgcctcatattttttagtgcattacattcaacaatgaagctcttgtgagctcccttattttgaaggttcagaacctttatggcaacaaatttatctt |
10660422 |
T |
|
| Q |
642 |
ctgatgcaagatttcctttgtacacagaaccaaaacttcctaatgcaaccaggtttctagcagaaaatccatcagttccttggtgaaggtctttgtatga |
741 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
10660423 |
ctgatgcaagatttcctttgtagacagaaccaaaacctcctaatccaacaaggtttctagcagaaaatccatcagttccttggtgaaggtcttgatatga |
10660522 |
T |
|
| Q |
742 |
aaccctagcaagcgggtcaattattggtagatcatacaattgtttcttgtttcttttcctcatttggtagatagttagaataattgtcac |
831 |
Q |
| |
|
||| || ||||||||||||||||||||| ||||| | || ||||| | ||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
10660523 |
aactctggcaagcgggtcaattattggtggatcagaattttttttctcaacttttttcctcatttgatagatagttagaacaattgtcac |
10660612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 147 - 839
Target Start/End: Complemental strand, 7193371 - 7192679
Alignment:
| Q |
147 |
tacctggaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaa |
246 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| | |||||| ||||||||||||||||||||||||| |
|
|
| T |
7193371 |
tacctggaggagcatagccaatagtccctttaattccaattgtactagtttctcgatgagaggtgtcgtcaataactgagacaagtcttgctatgccaaa |
7193272 |
T |
|
| Q |
247 |
atcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatgt |
346 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||| || ||||||||||||| |||||||||||||| |
|
|
| T |
7193271 |
atcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggctttagatcacaatgaatgatcgattgctcacattcaagatgaaggtaatgt |
7193172 |
T |
|
| Q |
347 |
aatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctggatgtagccattgttcta |
446 |
Q |
| |
|
|||||| | ||||| |||||| |||||||| || |||||||||||||||| |||||||| || || |||||| | | ||||||||||||||||||| |
|
|
| T |
7193171 |
aatacaaaggcaatatcaacagcgatattcaatctttgatcaaggtccaacgttctttgattctctacattcactgatctaggatgtagccattgttcta |
7193072 |
T |
|
| Q |
447 |
ggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttctatg |
546 |
Q |
| |
|
| |||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| ||||| |||||||||||||||| |||||||||||||| ||| |
|
|
| T |
7193071 |
agcttccgttgttcatgtattcaaagactaaagctttaaattcttgacctttgtaatctgtactggaacaacatgtcaaaatcttaaccaaatttcgatg |
7192972 |
T |
|
| Q |
547 |
cctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatcttctgat |
646 |
Q |
| |
|
|| ||||||| |||||||||||||||| ||||||| ||||||||||||||| ||||||||| |||||| | |||||||||||||||||||||| |
|
|
| T |
7192971 |
tctaatattttttagtgcattacattcagcaatgaaactcttgtgagctcccttcttttgaaggttcatgaccttcacggcaacaactttatcttctgat |
7192872 |
T |
|
| Q |
647 |
gcaagatttcctttgtacacagaaccaaaacttcctaatgcaaccaggtttctagcagaaaatccatcagttccttggtgaaggtctttgtatgaaaccc |
746 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| || |||| | ||||||||||||||| || |||||||| ||||||||||| | ||||||||| |
|
|
| T |
7192871 |
tcaagatttcctttgtacacagaaccaaagcttcctgatccaactaagtttctagcagaaaacccgtcagttccctggtgaaggtcctggtatgaaactt |
7192772 |
T |
|
| Q |
747 |
tagcaagcgggtcaattattggtagatcatacaattgtttcttgtttcttttcctcatttggtagatagttagaataattgtcaccatgagaa |
839 |
Q |
| |
|
|||| || |||||||| || ||| |||| | ||||||||||||||||||||||||| | ||||||||||| |||||||||| || |||||| |
|
|
| T |
7192771 |
tagctagtgggtcaatatttagtaaatcagaatattgtttcttgtttcttttcctcatcttgtagatagttaaaataattgtcgccgtgagaa |
7192679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 147 - 682
Target Start/End: Original strand, 10740542 - 10741077
Alignment:
| Q |
147 |
tacctggaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaa |
246 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10740542 |
tacctggaggagcatagccaacagttccttttattccaattgtactagtttccttgtgagaggtatcgtcaatggctgagacaagtcttgctatgccaaa |
10740641 |
T |
|
| Q |
247 |
atcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatgt |
346 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||| ||| |||||||| || ||||| |||||| |
|
|
| T |
10740642 |
atcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttagatcacaatgaaggaccaattgttcacattcttggtgaagataatgt |
10740741 |
T |
|
| Q |
347 |
aatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctggatgtagccattgttcta |
446 |
Q |
| |
|
||| ||| || | || ||||| || | || ||| |||||||||| ||||| || ||||||| | || | |||| | ||||||||||| |
|
|
| T |
10740742 |
aatgcagtggcgacatcgttcatgatgtttaatctatgaccaaggtccaatgttcttggatgatctgcatttaaaatctcaagatgcaaccattgttcta |
10740841 |
T |
|
| Q |
447 |
ggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttctatg |
546 |
Q |
| |
|
| |||| || |||||||| ||||| || | ||| ||||| ||||||||||||||| ||||| |||||||||||||||| |||||| ||||||| || |
|
|
| T |
10740842 |
agcttccatttttcatgtaatcaaaaacaagagctttaaaagtttgacctttgtaatctgtactagaacaacatgtcaaaatcttaactaaatttcggtg |
10740941 |
T |
|
| Q |
547 |
cctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatcttctgat |
646 |
Q |
| |
|
|| ||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| ||||||||| || ||||||| |
|
|
| T |
10740942 |
tctaatatttttgagtgcattacattcaacaatgaaactcttgtgagctcccttctttttgaggttcaagacctttacggcaacaacattgtcttctgtc |
10741041 |
T |
|
| Q |
647 |
gcaagatttcctttgtacacagaaccaaaacttcct |
682 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
10741042 |
acaagatttcctttgtacacagaaccaaaacttcct |
10741077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 143 - 745
Target Start/End: Original strand, 10588269 - 10588871
Alignment:
| Q |
143 |
aaagtacctggaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgc |
242 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| || | ||||| ||||||||||||||||||||| |
|
|
| T |
10588269 |
aaagtacctggaggagcatagccaacagtccctttaattccaattgtactagtttcctgatgagatgtgtcttcaataactgagacaagtcttgctatgc |
10588368 |
T |
|
| Q |
243 |
caaaatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggta |
342 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||||||||||| || |||||||||| ||||||||||| |||| | |||||||||||||||||||| || |
|
|
| T |
10588369 |
caaaatcactcacatgagcaaccatgtcatcgtcaagaaggacgttgcttggctttatatcacaatgaaggaccacctgctcacattcatgatgaagata |
10588468 |
T |
|
| Q |
343 |
atgtaatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctggatgtagccattgt |
442 |
Q |
| |
|
||||| | |||||||||| || | | ||||||| | || ||| ||||||||||| ||||| || | ||| ||||| | | |||||| ||||||||| |
|
|
| T |
10588469 |
atgtagtgcagaagcaatatcgatagtgatatttaatctatgaacaaggtccaacgttcttggatgctctgaattcacattccatggatgaagccattgt |
10588568 |
T |
|
| Q |
443 |
tctaggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttc |
542 |
Q |
| |
|
|||| |||| || |||||||| ||||| |||||||| ||||| ||||||||||| ||||| |||| ||||||||||| |||| ||| ||||||||| |
|
|
| T |
10588569 |
tctaaacttccatttttcatgtaatcaaaaactaaagctttaaattcttgacctttataatcagtaccagaacaacatgttaaaatcttggccaaatttc |
10588668 |
T |
|
| Q |
543 |
tatgcctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatcttc |
642 |
Q |
| |
|
||| || | ||| | |||||||||||||| |||| || ||||| | ||||||| ||||||||| ||||| || |||||| |||||||| |
|
|
| T |
10588669 |
gatgtctaacattcttgagtgcattacattcggcaataaaactcttatcagctcccttctttttaaggttcagaaccttgatagcaacagatttatcttg |
10588768 |
T |
|
| Q |
643 |
tgatgcaagatttcctttgtacacagaaccaaaacttcctaatgcaaccaggtttctagcagaaaatccatcagttccttggtgaaggtctttgtatgaa |
742 |
Q |
| |
|
|||| | ||| |||||||||| || |||| |||||||||| || ||| || ||||| | | || ||||||||||||||||| || || |||| ||||||| |
|
|
| T |
10588769 |
tgatacgagaattcctttgtatacggaacaaaaacttcctgatccaatcaagtttccatctgagaatccatcagttccttgatgtagttcttggtatgaa |
10588868 |
T |
|
| Q |
743 |
acc |
745 |
Q |
| |
|
||| |
|
|
| T |
10588869 |
acc |
10588871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 147 - 745
Target Start/End: Complemental strand, 10605118 - 10604520
Alignment:
| Q |
147 |
tacctggaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaa |
246 |
Q |
| |
|
|||||||||||||||| |||||||| ||||| || |||||||||||||| | | | ||||||| |||||| ||||| ||||||||||||||||| |
|
|
| T |
10605118 |
tacctggaggagcatatccaacagttccttttatcccaattgtactagtatttatatgagaggtaccaccaatggacgagaccagtcttgctatgccaaa |
10605019 |
T |
|
| Q |
247 |
atcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatgt |
346 |
Q |
| |
|
||||||||||||||||||||| || |||||||| |||||||| |||||||||||||||||||||||||| |||||||||||| |||||||| ||||| |
|
|
| T |
10605018 |
atcactcacatgagcaaccatatcatcatcaagtaggacattgcttggctttagatcacaatgaatgactaattgctcacattcttgatgaagataatgc |
10604919 |
T |
|
| Q |
347 |
aatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctggatgtagccattgttcta |
446 |
Q |
| |
|
||| ||||||||| |||| |||||| || | || || | ||||||||||| || || || | ||||||| | || | ||||| | ||||||||||| |
|
|
| T |
10604918 |
aatgcagaagcaacatcaaaaatgatgttaaatcttttaccaaggtccaacgttgttggaggctctgcatttaaaatctcaggatgcaaccattgttcta |
10604819 |
T |
|
| Q |
447 |
ggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttctatg |
546 |
Q |
| |
|
| |||| || |||||||| ||||| |||| ||| ||||| ||||||||||||||||| ||||| ||||||||||| ||||| | ||| ||||| | || |
|
|
| T |
10604818 |
agcttccatttttcatgtaatcaaaaactagagctttaaattcttgacctttgtaatctgtactagaacaacatgttaaaacttgaactaaattccggtg |
10604719 |
T |
|
| Q |
547 |
cctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatcttctgat |
646 |
Q |
| |
|
|| ||| ||| ||||||||||||||||||||||| ||||||| |||||| | |||||||||||||||| ||||| || ||||||||||| |
|
|
| T |
10604718 |
tcttatagttttgagtgcattacattcaacaatgaaattcttgtgtgctcccttcttttggaggttcaggacctttacagcaactacattatcttctgac |
10604619 |
T |
|
| Q |
647 |
gcaagatttcctttgtacacagaaccaaaacttcctaatgcaaccaggtttctagcagaaaatccatcagttccttggtgaaggtctttgtatgaaacc |
745 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| ||| || ||||||| | || || ||||| ||||||||||| | ||| | |||||||||| |
|
|
| T |
10604618 |
acaagatttcctctgtacacagaaccaaaacttcctaatccaatcaagtttctatccgagaacccatcggttccttggtgtaagtcatggtatgaaacc |
10604520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 147 - 745
Target Start/End: Original strand, 10762976 - 10763574
Alignment:
| Q |
147 |
tacctggaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaa |
246 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||| |||||||||||||||| ||||||| |||||||| || ||||||||||| ||||| |
|
|
| T |
10762976 |
tacctggaggagcatagccaacagttccttttattccagttgtactagtttccttaagagaggtacaagcaatggcttgaactagtcttgctattccaaa |
10763075 |
T |
|
| Q |
247 |
atcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatgt |
346 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||| ||||||| |||||| |
|
|
| T |
10763076 |
atcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttagatcacaatgaaggaccaattgctcacattctcgatgaagataatgt |
10763175 |
T |
|
| Q |
347 |
aatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacct-ggatgtagccattgttct |
445 |
Q |
| |
|
||| ||||||||| |||| |||||||||||||| ||||||||| ||||| || || || || ||||||| | || ||| || || |||||| ||||| |
|
|
| T |
10763176 |
aatgcagaagcaacatcaataatgatattcagtctttgatcaagatccaatgttgttggagtctctgcattta-aattcctagggtgcagccatcgttct |
10763274 |
T |
|
| Q |
446 |
aggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttctat |
545 |
Q |
| |
|
| | |||| || |||||||| ||||| || | ||| ||||| ||||||||||| ||||| ||||| ||||||||||| |||| |||||| ||||| | | |
|
|
| T |
10763275 |
aagcttccatttttcatgtaatcaaaaaccagagctttaaattcttgacctttataatcagtactagaacaacatgttaaaatcttaactaaattccggt |
10763374 |
T |
|
| Q |
546 |
gcctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatcttctga |
645 |
Q |
| |
|
| ||||||| |||||||||||||||||||||||| |||||||||||||| | ||||| | ||| ||||| ||||||| || |||||||| |
|
|
| T |
10763375 |
gttgaatattttttagtgcattacattcaacaatgaaactcttgtgagctccattgttttggaggttgaagacttttatagcaacaatattgtcttctga |
10763474 |
T |
|
| Q |
646 |
tgcaagatttcctttgtacacagaaccaaaacttcctaatgcaaccaggtttctagcagaaaatccatcagttccttggtgaaggtctttgtatgaaacc |
745 |
Q |
| |
|
||||||||||| |||||||| |||| |||||||| || | | ||||||| || | || || ||||| ||||||||| | | |||| |||||||||| |
|
|
| T |
10763475 |
cacaagatttcctctgtacacatcaccagaacttcctgatccgatcaggtttttatccgagaacccatctgttccttggagtaactcttggtatgaaacc |
10763574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 147 - 804
Target Start/End: Complemental strand, 10559268 - 10558611
Alignment:
| Q |
147 |
tacctggaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaa |
246 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| || ||| | |||||| ||||||||||||||||| |
|
|
| T |
10559268 |
tacctggaggagcatagccaacagtcccttttattccaattgtgctagtttccttaggagatataccgtccgcagatgagacgagtcttgctatgccaaa |
10559169 |
T |
|
| Q |
247 |
atcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatgt |
346 |
Q |
| |
|
|||||||||||||||||| |||| ||||||| ||||||||| |||||||||||||||||||||| |||| |||||||||||| ||||||| |||||| |
|
|
| T |
10559168 |
atcactcacatgagcaacattgtcttcatcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacattctcgatgaagataatgt |
10559069 |
T |
|
| Q |
347 |
aatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctggatgtagccattgttcta |
446 |
Q |
| |
|
||| ||||||||| |||| |||||||||||||| ||||| ||| ||||| |||| | | || ||||||| || | || ||| | ||| | ||||| |
|
|
| T |
10559068 |
aatgcagaagcaacatcaataatgatattcagtctttgattaagatccaatgctcttggttgctctacattcatcatccttgaatgcaaccagttttcta |
10558969 |
T |
|
| Q |
447 |
ggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttctatg |
546 |
Q |
| |
|
| |||| || |||||||||||||| |||| ||| || || || |||||||||||||| |||| |||||||| || |||| |||||||| ||||| ||| |
|
|
| T |
10558968 |
agcttccatttttcatgtattcaaaaactagagctttgaattcctgacctttgtaatcaatactagaacaacaagttaaaatcttaaccagatttcgatg |
10558869 |
T |
|
| Q |
547 |
cctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatcttctgat |
646 |
Q |
| |
|
|| ||||||| ||||||||||||||| ||| || |||||||||||||| ||||| ||||||||| | |||| ||||||||||||||| |
|
|
| T |
10558868 |
tctaatattttttagtgcattacattcggtaataaaactcttgtgagctccattcttttcaaggtccaggaccttcacagcaataactttatcttctgac |
10558769 |
T |
|
| Q |
647 |
gcaagatttcctttgtacacagaaccaaaacttcctaatgcaaccaggtttctagcagaaaatccatcagttccttggtgaaggtctttgtatgaaaccc |
746 |
Q |
| |
|
|||||||||||| ||||| |||||||| | |||| || ||| || |||||||| || || ||||||||| | || | | ||||| ||| |||||| |
|
|
| T |
10558768 |
ataagatttcctttatacaccgaaccaaagcctcctgatccaatcaagtttctagatgagaagccatcagttgcctgatacaagtcttggtaagaaacca |
10558669 |
T |
|
| Q |
747 |
tagcaagcgggtcaattattggtagatcatacaattgtttcttgtttcttttcctcat |
804 |
Q |
| |
|
||||||| |||||||||||||| ||| | || |||||||||||||||||||||| |
|
|
| T |
10558668 |
tagcaagttggtcaattattggtgaatctgaagatggtttcttgtttcttttcctcat |
10558611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 147 - 745
Target Start/End: Original strand, 9836171 - 9836769
Alignment:
| Q |
147 |
tacctggaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaa |
246 |
Q |
| |
|
||||||| ||||||||||||| |||||| ||| | |||||||||||||||| | ||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
9836171 |
tacctgggggagcatagccaatggtccctgatattgtagttgtactagtttccttatgagaggtaccgtcaatggctgagataagtcttgctatgccaaa |
9836270 |
T |
|
| Q |
247 |
atcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatgt |
346 |
Q |
| |
|
||||||||| ||||||||||||| ||||| ||||||| || |||||||| | |||||||||||||||| |||||||||||||| |||||| |||||| |
|
|
| T |
9836271 |
atcactcacgtgagcaaccatgttatcatcgagaaggatgttgcttggcttgatatcacaatgaatgaccacttgctcacattcacaatgaagataatgt |
9836370 |
T |
|
| Q |
347 |
aatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctggatgtagccattgttcta |
446 |
Q |
| |
|
||| |||||||||| |||| |||||| |||| |||| |||||| ||| |||| || | ||| || || | | | |||| ||||||||||||| |
|
|
| T |
9836371 |
aatgcagaagcaatatcaatggagatatttagtctttgaacaaggttcaatgttctaggatactctgaatccactgtccagggataaagccattgttcta |
9836470 |
T |
|
| Q |
447 |
ggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttctatg |
546 |
Q |
| |
|
| |||| || |||||||| ||||| |||||||| ||||| ||| |||||| ||||| |||| ||||||||||| | |||||| |||||||||| ||| |
|
|
| T |
9836471 |
agcttccatttttcatgtaatcaaaaactaaagctttaaattctccacctttataatcaatactagaacaacatgttataaccttgaccaaatttcgatg |
9836570 |
T |
|
| Q |
547 |
cctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatcttctgat |
646 |
Q |
| |
|
|| ||||||| ||||||||||||||| |||| || ||||| ||||||||| |||||||| |||||||| |||||||||||||||| |||| |
|
|
| T |
9836571 |
tctaatatttttgagtgcattacattcagcaataaaactcttatgagctcccttctttttgaggttcagaacctttatagcaacaactttatcttgtgat |
9836670 |
T |
|
| Q |
647 |
gcaagatttcctttgtacacagaaccaaaacttcctaatgcaaccaggtttctagcagaaaatccatcagttccttggtgaaggtctttgtatgaaacc |
745 |
Q |
| |
|
||| |||||||||||| || | ||||||||||||| || ||| || |||||| | || || |||||||||| || || || |||| |||||||||| |
|
|
| T |
9836671 |
acaatatttcctttgtatacggtaccaaaacttcctgatccaatcaaatttctatctgagaactcatcagttccatgatgtagttcttggtatgaaacc |
9836769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 147 - 725
Target Start/End: Complemental strand, 10612076 - 10611498
Alignment:
| Q |
147 |
tacctggaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaa |
246 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||| | ||| | ||||| | ||||||| ||||||||||||||||||||||| |
|
|
| T |
10612076 |
tacctggaggagcatagccaacagtccctttaattccaattgtcttagtattcttatgagaggaaccaccaatggccgagacaagtcttgctatgccaaa |
10611977 |
T |
|
| Q |
247 |
atcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatgt |
346 |
Q |
| |
|
|||||||||||| |||||||| || |||||||| |||||||| |||||||||| ||||||||||| |||| |||||||||||||| |||||| |||||| |
|
|
| T |
10611976 |
atcactcacatgtgcaaccatatcatcatcaagtaggacattgcttggctttatatcacaatgaaggaccaattgctcacattcattatgaagataatgt |
10611877 |
T |
|
| Q |
347 |
aatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacct--ggatgtagccattgttc |
444 |
Q |
| |
|
||| ||||| ||| || | |||||| || | || ||| |||||||| || | | | || |||| | | |||| ||||| | ||||||||| |
|
|
| T |
10611876 |
aatgcagaaccaacatccataatgatgtttaatctatgactgaggtccaatgttgctgtatgctcttcatt--taaaaccttgggatgcaaccattgttc |
10611779 |
T |
|
| Q |
445 |
taggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttcta |
544 |
Q |
| |
|
|| | |||| || |||||||| ||||| |||| || ||||| ||||||||||||||||| ||||| ||||||||||| |||| |||||| ||||||| |
|
|
| T |
10611778 |
taagcttccatttttcatgtaatcaaaaactagggctttaaattcttgacctttgtaatctgtactagaacaacatgttaaaatcttaactaaatttcgg |
10611679 |
T |
|
| Q |
545 |
tgcctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatcttctg |
644 |
Q |
| |
|
|| || ||| || |||||||||||||||||||||||| |||||||||||||| | ||||| | ||||||||| |||||||| || ||||||| |
|
|
| T |
10611678 |
tgtctaataaattttagtgcattacattcaacaatgaaactcttgtgagctccattgttttggaggttgaagacctttatagcaacaacattgtcttctg |
10611579 |
T |
|
| Q |
645 |
atgcaagatttcctttgtacacagaaccaaaacttcctaatgcaaccaggtttctagcagaaaatccatcagttccttggt |
725 |
Q |
| |
|
| ||||||||||| |||||||| ||||||||||||| || | | || ||||||| | || || ||||| |||||||||| |
|
|
| T |
10611578 |
acacaagatttcctctgtacacatcaccaaaacttcctgatccgatcaagtttctatctgagaacccatcggttccttggt |
10611498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 147 - 723
Target Start/End: Complemental strand, 10565393 - 10564817
Alignment:
| Q |
147 |
tacctggaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaa |
246 |
Q |
| |
|
|||| ||||||| |||||| || || ||||||| | |||||||||| || | || | ||||||| || |||| |||||||| ||||||||||||||||| |
|
|
| T |
10565393 |
taccaggaggagaatagcctactgttcctttaacttcaattgtacttgtatttttataagaggtactgccaatagctgagacgagtcttgctatgccaaa |
10565294 |
T |
|
| Q |
247 |
atcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatgt |
346 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||| ||| ||||||||||||||||||||||||||| || |||||||| |||||| |||||| |
|
|
| T |
10565293 |
atcactcacatgagcaaccatgtcatcgtcaagaaggatattgcttggctttagatcacaatgaatgaccaattcttcacattctctatgaagataatgt |
10565194 |
T |
|
| Q |
347 |
aatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctggatgtagccattgttcta |
446 |
Q |
| |
|
||| ||||||||| || | ||| || | | || ||| ||| |||||| || || | ||||||| | || | ||||| | |||||| |||| |
|
|
| T |
10565193 |
aatgcagaagcaacatcgataataatgtataatctatgagcaaagtccaatgttgttgggggttctgcatttaaaatctcaggatgcaaccattgatcta |
10565094 |
T |
|
| Q |
447 |
ggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttctatg |
546 |
Q |
| |
|
| |||| || |||||||| ||||| || | ||| ||||| ||||||||||||||||| ||||| |||||||| || ||||||||||| ||||||| || |
|
|
| T |
10565093 |
agcttccatttttcatgtactcaaaaaccagagctttaaattcttgacctttgtaatctgtacttgaacaacaggttaaaaccttaactaaatttcggtg |
10564994 |
T |
|
| Q |
547 |
cctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatcttctgat |
646 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
10564993 |
tcgaatatttttgagtgcattacattcaacaatgaaactcttgtgagctcccttcttttggaggttcaggacctttacggcaacaacattatcttctgac |
10564894 |
T |
|
| Q |
647 |
gcaagatttcctttgtacacagaaccaaaacttcctaatgcaaccaggtttctagcagaaaatccatcagttccttg |
723 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| || | | || |||||||| || || ||||| |||||||| |
|
|
| T |
10564893 |
acaagatttcctttgtacacaagaccaaaacttcctgatcctatcaagtttctagttgagaacccatcggttccttg |
10564817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 147 - 750
Target Start/End: Original strand, 10716783 - 10717386
Alignment:
| Q |
147 |
tacctggaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaa |
246 |
Q |
| |
|
||||||| ||||||||||||| ||||||| ||||||| |||||| || ||||| | ||||||| || |||| | ||||||||| ||||||||||||| |
|
|
| T |
10716783 |
tacctgggggagcatagccaatgctcccttttattccaactgtactggtatccttatcagaggtaatgccaatatccgagacaagttttgctatgccaaa |
10716882 |
T |
|
| Q |
247 |
atcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatgt |
346 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||| ||| |||||||| || ||||| |||||| |
|
|
| T |
10716883 |
atcagtcacatgagcaaccatgtcatcatcaagaaggacattgcttggcttaagatcacaatgaatgattaattgttcacattcttggtgaagataatgt |
10716982 |
T |
|
| Q |
347 |
aatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctggatgtagccattgttcta |
446 |
Q |
| |
|
||| ||| || | || | ||||| || | || ||| |||||||||| ||||| || ||||||| | || | |||| | ||||||||||| |
|
|
| T |
10716983 |
aatgcagtggcgacatcgatcatgatgtttaatctatgaccaaggtccaatgttcttggatgatctgcatttaaaatctcaagatgcaaccattgttcta |
10717082 |
T |
|
| Q |
447 |
ggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttctatg |
546 |
Q |
| |
|
| |||| || |||||||| ||||| |||| ||| ||||| ||||||||||||||| ||||| ||||||||||| || | ||| || | ||||| || |
|
|
| T |
10717083 |
agcttccatttttcatgtaatcaaaaactagagctttaaaagtttgacctttgtaatctgtactagaacaacatgttaatatcttcactagatttcggtg |
10717182 |
T |
|
| Q |
547 |
cctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatcttctgat |
646 |
Q |
| |
|
|| ||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| ||||||||| || |||||||| |
|
|
| T |
10717183 |
tctgatattttttagtgcattacattcaacaatgaaactcttgtgagctcccttctttttgaggttcaagacctttacggcaacaacattgtcttctgac |
10717282 |
T |
|
| Q |
647 |
gcaagatttcctttgtacacagaaccaaaacttcctaatgcaaccaggtttctagcagaaaatccatcagttccttggtgaaggtctttgtatgaaaccc |
746 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||| || |||||| | || || ||||| |||||| |||| | ||||| ||||||||| |
|
|
| T |
10717283 |
acaagatttcctttgtacacagaaccaaaacttcctgatccaatcaagtttctttctgagaacccatcggttcctcggtgtaagtcttgatatgaaacct |
10717382 |
T |
|
| Q |
747 |
tagc |
750 |
Q |
| |
|
|||| |
|
|
| T |
10717383 |
tagc |
10717386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 148 - 672
Target Start/End: Original strand, 19605709 - 19606233
Alignment:
| Q |
148 |
acctggaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaaa |
247 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||| |||||||| | |||| |||||||| | || ||||||||||||||||||||| |
|
|
| T |
19605709 |
acctggaggagcatagccaatggtcccttttattccaattgtgctagtttcttgacaagagttattgtcagcagaagatacaagtcttgctatgccaaaa |
19605808 |
T |
|
| Q |
248 |
tcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatgta |
347 |
Q |
| |
|
||||||||||| ||||| || ||||| |||| ||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
19605809 |
tcactcacatgtgcaacgatatcgtcgtcaataaggacattgcttggctttagatcacaatgaaggaccaattgctcacattcatgatgaaggtaatgta |
19605908 |
T |
|
| Q |
348 |
atacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctggatgtagccattgttctag |
447 |
Q |
| |
|
|| |||||| || || |||| |||||| | || ||| |||| | ||| ||||| || ||||||||||| | || ||||| | ||||||||||| |
|
|
| T |
19605909 |
atgcagaagaaacatcgacaaggatatttaatctttgctcaaacttcaatgttcttggatgatctgcattcattgtcccgggatgcaaccattgttctaa |
19606008 |
T |
|
| Q |
448 |
gtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttctatgc |
547 |
Q |
| |
|
| |||| || ||||||| ||||| |||| ||| || || ||| ||||||||| ||| |||| |||||||| || |||| |||||| ||||||| ||| |
|
|
| T |
19606009 |
gcttccatttctcatgtactcaaaaactagagctttgaattctagacctttgttatcaatactagaacaacaagttaaaatcttaactaaatttcgatgt |
19606108 |
T |
|
| Q |
548 |
ctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatcttctgatg |
647 |
Q |
| |
|
|| ||||||| || |||||||||||| ||| || ||||||||||||||| ||||||||||||||| | |||| ||||||||||||||| |
|
|
| T |
19606109 |
ctaatatttttgagagcattacattcagtaataaaactcttgtgagctcccttcttttcaaggttcaggaccttaacagcaataactttatcttctgaca |
19606208 |
T |
|
| Q |
648 |
caagatttcctttgtacacagaacc |
672 |
Q |
| |
|
|||||||||||| ||||| ||||| |
|
|
| T |
19606209 |
taagatttcctttatacacggaacc |
19606233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 219 - 744
Target Start/End: Original strand, 11048572 - 11049097
Alignment:
| Q |
219 |
tggctgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgc |
318 |
Q |
| |
|
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| | | |
|
|
| T |
11048572 |
tggctgagacaagttttgcaatgccaaaatcactcacatgagcaaccatgtcgtcgttaagaagaacattacttggctttagatcacaatgaataatcaa |
11048671 |
T |
|
| Q |
319 |
ttgctcacattcatgatgaaggtaatgtaatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattc |
418 |
Q |
| |
|
|||||||||||| ||||| || ||||||||| ||||||||| || | |||||| || | | | | |||||||||| || || || | ||| ||| |
|
|
| T |
11048672 |
ttgctcacattcttgatgcagataatgtaatgcagaagcaacatcgataatgatgtttaacctatcaccaaggtccaatgtttttggatgctctgaattt |
11048771 |
T |
|
| Q |
419 |
attatacctggatgtagccattgttctaggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaac |
518 |
Q |
| |
|
| || | ||||||| ||||||||||| | |||| || |||||||| ||||| |||| || ||||| |||| |||||||||||| ||||| ||||||| |
|
|
| T |
11048772 |
aaaatctcaggatgtaaccattgttctaagcttccatttttcatgtaatcaaaaactagtgctttaaattcttcacctttgtaatctgtactagaacaac |
11048871 |
T |
|
| Q |
519 |
atgtcaaaaccttaaccaaatttctatgcctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggac |
618 |
Q |
| |
|
| || ||||||||||| || |||| || || || |||| ||||||||||||||||||||||| |||||| |||||| | ||||| | ||| |
|
|
| T |
11048872 |
aggttaaaaccttaactaagtttcggtgtctaatgtttttgagtgcattacattcaacaatgaaactcttgctagctccattgttttggaggttgaagac |
11048971 |
T |
|
| Q |
619 |
ctttatggcaacaactttatcttctgatgcaagatttcctttgtacacagaaccaaaacttcctaatgcaaccaggtttctagcagaaaatccatcagtt |
718 |
Q |
| |
|
|| | |||||||| ||| |||| || ||||||||||| ||||||||||||| |||| |||| || ||| || |||| || | || |||||||| ||| |
|
|
| T |
11048972 |
tttcacagcaacaacattaccttccgacacaagatttcctctgtacacagaaccgaaacctcctgatccaatcaagtttttatctgagaatccatcggtt |
11049071 |
T |
|
| Q |
719 |
ccttggtgaaggtctttgtatgaaac |
744 |
Q |
| |
|
||||| || | |||| ||||||||| |
|
|
| T |
11049072 |
ccttgatgtaaatcttggtatgaaac |
11049097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 219 - 682
Target Start/End: Original strand, 10746930 - 10747393
Alignment:
| Q |
219 |
tggctgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgc |
318 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||| |
|
|
| T |
10746930 |
tggctgagacaagttttgctatgccaaaatcagtcacatgagcaaccatgtcatcatcaagaaggacattgcttggcttgagatcacagtgaatgactaa |
10747029 |
T |
|
| Q |
319 |
ttgctcacattcatgatgaaggtaatgtaatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattc |
418 |
Q |
| |
|
|||||||||||| || ||||| ||||||||| ||||||| || | |||||| || | || || ||||||| ||| || || || | || |||| |
|
|
| T |
10747030 |
ttgctcacattcttggtgaagataatgtaatgttgaagcaacatcgataatgatgtttaatctgtggccaaggtctaacgtttttggatgctcttcattt |
10747129 |
T |
|
| Q |
419 |
attatacctggatgtagccattgttctaggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaac |
518 |
Q |
| |
|
| | | ||||| | ||||||||||| | |||| || || ||||| | ||| |||| ||| |||||||| ||| |||||||||| |||| ||||||| |
|
|
| T |
10747130 |
aaaaactcaggatgcaaccattgttctaagcttccattttttatgtaataaaaaactagagctttaaactcctgaactttgtaatctatactagaacaac |
10747229 |
T |
|
| Q |
519 |
atgtcaaaaccttaaccaaatttctatgcctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggac |
618 |
Q |
| |
|
| || |||| |||||| ||||||| || || || || | ||| ||||||||||||||||||| ||||||||||||||| ||||||| ||||| |
|
|
| T |
10747230 |
acgttaaaatcttaactaaatttcggtgtctaatgttcttgagtacattacattcaacaatgaaactcttgtgagctcccttcttttgaaggtttaggac |
10747329 |
T |
|
| Q |
619 |
ctttatggcaacaactttatcttctgatgcaagatttcctttgtacacagaaccaaaacttcct |
682 |
Q |
| |
|
|||| ||||||| | |||| ||| || ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10747330 |
ttttacggcaacagcattattttcggacacaagatttcctttgtacactgaaccaaaacttcct |
10747393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 216 - 744
Target Start/End: Original strand, 10216661 - 10217189
Alignment:
| Q |
216 |
caatggctgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgac |
315 |
Q |
| |
|
|||||| |||||||| | ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||| ||||||||||||||||||||||| | |
|
|
| T |
10216661 |
caatggttgagacaaatgttgctatgccaaaatcactcacatgagcaaccatgtcatcattcagaagaacattgcttggctttagatcacaatgaataat |
10216760 |
T |
|
| Q |
316 |
cgcttgctcacattcatgatgaaggtaatgtaatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgca |
415 |
Q |
| |
|
| |||||||||||| ||||| || ||||||||| | ||||||| || | |||||| || | | ||| |||||||||| || || || | ||| | |
|
|
| T |
10216761 |
caattgctcacattcttgatgcagataatgtaatgccgaagcaacatcgataatgatgtttaacctatgaccaaggtccaatgtttttggatgctctgaa |
10216860 |
T |
|
| Q |
416 |
ttcattatacctggatgtagccattgttctaggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaac |
515 |
Q |
| |
|
|| | || | ||||| | ||||||||||| | |||| || |||||||| | ||| |||| ||| ||||| |||||||||||||| | ||||| |||| |
|
|
| T |
10216861 |
tttaaaatctcaggatgcaaccattgttctaagcttccatttttcatgtaataaaaaactagagctttaaattcttgacctttgtagtttgtactagaac |
10216960 |
T |
|
| Q |
516 |
aacatgtcaaaaccttaaccaaatttctatgcctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcag |
615 |
Q |
| |
|
||||||| ||||||||||| | |||| || || || |||| |||||||||||||||||||| || |||||| |||||| | ||||| || |
|
|
| T |
10216961 |
aacatgttaaaaccttaactgagtttcggtgtctaatgtttttgagtgcattacattcaacaataaaactcttgctagctccattcttttggaggtttag |
10217060 |
T |
|
| Q |
616 |
gacctttatggcaacaactttatcttctgatgcaagatttcctttgtacacagaaccaaaacttcctaatgcaaccaggtttctagcagaaaatccatca |
715 |
Q |
| |
|
|||||| | |||||||| ||| ||||||| ||||||| || | |||||| |||||||||||||| || ||| || |||| || | || || |||||| |
|
|
| T |
10217061 |
gaccttcacagcaacaacattaacttctgacacaagattcccgctatacacacaaccaaaacttcctgatccaatcaagtttttatccgagaacccatca |
10217160 |
T |
|
| Q |
716 |
gttccttggtgaaggtctttgtatgaaac |
744 |
Q |
| |
|
|||||||| || | ||||| ||||||||| |
|
|
| T |
10217161 |
gttccttgatgtaagtcttggtatgaaac |
10217189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 153 - 745
Target Start/End: Complemental strand, 10581356 - 10580759
Alignment:
| Q |
153 |
gaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaaatcact |
252 |
Q |
| |
|
||||||||||||||| || ||||| |||||| |||||||||| | ||| | || |||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
10581356 |
gaggagcatagccaattgttccttttattccagttgtactagtattcttatgagtggtaccacaaatggctgagacaagtcttgctgtgccaaaatcact |
10581257 |
T |
|
| Q |
253 |
cacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatgtaataca |
352 |
Q |
| |
|
||||||| ||||||| ||||||||||| | |||||||||||||||||| ||| |||| |||||||||||| ||||||| ||||||||| || |
|
|
| T |
10581256 |
cacatga----ccatgtcatcatcaagaagtg---tgcttggctttagatcacaacgaaggaccaattgctcacattctcgatgaagataatgtaatgca |
10581164 |
T |
|
| Q |
353 |
gaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctg--gatgtagccattgttctaggtt |
450 |
Q |
| |
|
||||||| || | |||||| || | || ||| |||||| ||| || || || ||||| | || | ||| |||| | ||||||||||| | | |
|
|
| T |
10581163 |
gaagcaacatccataatgatgtttaatctatgaccaaggttcaatgttgttagaggttctgcact---taaatctgaggatgcaaccattgttctaagct |
10581067 |
T |
|
| Q |
451 |
tccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttctatgcctc |
550 |
Q |
| |
|
||| || |||||||| | ||| |||||||| ||||| ||||| |||||||||| ||||| ||||||||||| | |||||| || |||||| || || |
|
|
| T |
10581066 |
tccatttttcatgtaataaaaaactaaagctttaaattcttggcctttgtaatttgtactagaacaacatgttagaaccttgactaaattttggtgtcta |
10580967 |
T |
|
| Q |
551 |
atattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggaccttta-tg------------gcaacaacttta |
637 |
Q |
| |
|
||||||| |||||||||||||||||||| || |||||||||||||| | ||||||| |||||||| || |||||||| ||| |
|
|
| T |
10580966 |
atatttttgagtgcattacattcaacaataaaactcttgtgagctcctttcttttggaggttcaagacctttactgcaacaacattatgcaacaacatta |
10580867 |
T |
|
| Q |
638 |
tcttctgatgcaagatttcctttgtacacagaaccaaaacttcctaatgcaaccaggtttctagcagaaaatccatcagttccttggtgaaggtctttgt |
737 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||||||||||||| | | | || ||||||| | || || ||||||||||||| ||| | |||||||| |
|
|
| T |
10580866 |
tcttctgacacaagatttcctttgtacacggaaccaaaacttcctgacccgatcatgtttctatccgagaacccatcagttcctttgtgtaagtctttgt |
10580767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 151 - 643
Target Start/End: Complemental strand, 9825439 - 9824970
Alignment:
| Q |
151 |
tggaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaaatca |
250 |
Q |
| |
|
|||||||||||| |||||||||||||| | ||||||||| |||||||||||| ||| || || | ||||||||||||||| |||||||||||| |
|
|
| T |
9825439 |
tggaggagcatatccaacagtcccttttagtccaattgtgctagtttccttggaggagata----ca---gatgagacaagtcttgcaatgccaaaatca |
9825347 |
T |
|
| Q |
251 |
ctcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatgtaata |
350 |
Q |
| |
|
||| | |||| ||| || || ||||||| ||||| |||||||||||||| ||||||||||| || ||||||||| ||| ||| |
|
|
| T |
9825346 |
ctcgcctgagaaacaatatcttcatcaacaaggatattacttggctttatatcacaatgaaggattaattgctcacaatcacgat--------------- |
9825262 |
T |
|
| Q |
351 |
cagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctggatgtagccattgttct-aggt |
449 |
Q |
| |
|
||||||| |||| ||||||||||| || ||||||||| ||||| |||| || | || ||||| ||| | ||||| | |||||||||| || | |
|
|
| T |
9825261 |
--gaagcaacatcaataatgatattcaatctttgatcaagatccaatgttctaggatgctctacattctctatccttggattcaaccattgttctaagct |
9825164 |
T |
|
| Q |
450 |
ttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttctatgcct |
549 |
Q |
| |
|
| || || | |||||| ||||| |||| ||| || || ||||| |||||||||||| |||| ||| ||||||| |||| |||||||||||||| ||| || |
|
|
| T |
9825163 |
tcccattttgcatgtactcaaaaactagagctttgaattcttgccctttgtaatcgatactagaaaaacatgttaaaatcttaaccaaatttcgatgtct |
9825064 |
T |
|
| Q |
550 |
catattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatcttct |
643 |
Q |
| |
|
||||||| ||| |||||||||| ||| || ||||||||||||||| || ||||| |||||||||||||| ||||||||||||| |
|
|
| T |
9825063 |
aatatttttgagttcattacattcggtaataaaactcttgtgagctcccttcttttcaaagttcaagacctttatggcaataactttatcttct |
9824970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 10651917 - 10651974
Alignment:
| Q |
19 |
cagaacccattccatactctaaaagataaaacaaaaacatttaatactatgtaattag |
76 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
10651917 |
cagaacccattccatactctaaaagataaaacagaaacatttaatactatgtaattag |
10651974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 494 - 598
Target Start/End: Complemental strand, 10550803 - 10550699
Alignment:
| Q |
494 |
cctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttctatgcctcatattttatagtgcattacattcaacaatgaagctcttgtgag |
593 |
Q |
| |
|
||||||||||| || || |||||||| ||||||| ||||| | |||||| ||||| ||||||| |||||||||||||||| ||||||| ||||||||| |
|
|
| T |
10550803 |
cctttgtaatctgtgctggaacaacaagtcaaaattttaactagatttctgtgcctaatattttttagtgcattacattcagcaatgaaactcttgtgaa |
10550704 |
T |
|
| Q |
594 |
ctccc |
598 |
Q |
| |
|
||||| |
|
|
| T |
10550703 |
ctccc |
10550699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 10746870 - 10746918
Alignment:
| Q |
147 |
tacctggaggagcatagccaacagtccctttaattccaattgtactagt |
195 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
10746870 |
tacctggaggagcatagccaacagttccttttattccaattgtactagt |
10746918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 9849831 - 9849881
Alignment:
| Q |
152 |
ggaggagcatagccaacagtccctttaattccaattgtactagtttccttg |
202 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
9849831 |
ggaggagcatatccaacagtcccttttattccaattgttttagtttccttg |
9849881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 10659800 - 10659852
Alignment:
| Q |
19 |
cagaacccattccatactctaaaagataaaacaaaaacatttaatactatgtaa |
72 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||| |||||||||||||| |
|
|
| T |
10659800 |
cagaacccattccatactctaaaagataagaaaaaaac-gttaatactatgtaa |
10659852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 10588174 - 10588221
Alignment:
| Q |
19 |
cagaacccattccatactctaaaagataaaacaaaaacatttaatact |
66 |
Q |
| |
|
||||||||||||||||||||| ||||| || ||||| ||||||||||| |
|
|
| T |
10588174 |
cagaacccattccatactctacaagattaagcaaaagcatttaatact |
10588221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 7193501 - 7193456
Alignment:
| Q |
19 |
cagaacccattccatactctaaaagataaaacaaaaacatttaata |
64 |
Q |
| |
|
|||||||||||||||| |||| |||||||| |||||| |||||||| |
|
|
| T |
7193501 |
cagaacccattccatattctacaagataaagcaaaaatatttaata |
7193456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 164; Significance: 3e-87; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 146 - 682
Target Start/End: Complemental strand, 12949011 - 12948475
Alignment:
| Q |
146 |
gtacctggaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaa |
245 |
Q |
| |
|
||||| || |||||||| ||||| || ||||| ||||||||||||||||| | ||| ||||||||| || ||||| ||||||||||||||||||||||| |
|
|
| T |
12949011 |
gtacccggtggagcataaccaactgttccttttattccaattgtactagtattcttattagaggtactggaaatggttgagacaagtcttgctatgccaa |
12948912 |
T |
|
| Q |
246 |
aatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatg |
345 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||| ||||||||||| ||||||| ||||| |
|
|
| T |
12948911 |
aatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatgaaggactaattgctcacattatcgatgaagataatg |
12948812 |
T |
|
| Q |
346 |
taatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctggatgtagccattgttct |
445 |
Q |
| |
|
|||| ||||||||| || | |||||| || | || || ||||| ||| || || || |||||||| | | ||||||| ||| |||||| |
|
|
| T |
12948811 |
taatgcagaagcaacatcgataatgatgtttaatctacgacgaaggttcaatgttgttggaggatttgcattcaaagtctcaggatgtaaccactgttct |
12948712 |
T |
|
| Q |
446 |
aggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttctat |
545 |
Q |
| |
|
| | |||| || |||||||||||||| |||| ||| ||||| ||||| ||||||| || || || ||||||||||| ||||||||||||||||||| | |
|
|
| T |
12948711 |
aagcttccatttttcatgtattcaaaaactagagctttaaattcttggcctttgttatttgtgctagaacaacatgttaaaaccttaaccaaatttcggt |
12948612 |
T |
|
| Q |
546 |
gcctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatcttctga |
645 |
Q |
| |
|
| || ||||||| |||||||||||||||||||||||| ||||||||||||||| | ||||||| ||| |||| |||||||| ||||||||||| |
|
|
| T |
12948611 |
gtctaatattttttagtgcattacattcaacaatgaaactcttgtgagctccctttttctggaggttcaagacttttactgcaacaacattatcttctga |
12948512 |
T |
|
| Q |
646 |
tgcaagatttcctttgtacacagaaccaaaacttcct |
682 |
Q |
| |
|
||| ||||||| |||| || ||||||||||||||| |
|
|
| T |
12948511 |
aacaatatttcctctgtatacggaaccaaaacttcct |
12948475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 147 - 682
Target Start/End: Complemental strand, 12958444 - 12957909
Alignment:
| Q |
147 |
tacctggaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaa |
246 |
Q |
| |
|
|||| ||||||||||| ||||| || ||||| ||||||||||| ||||| | ||| ||||||||| | ||||| |||||||||||||||||| ||||| |
|
|
| T |
12958444 |
tacccggaggagcataaccaactgttccttttattccaattgtgctagtattcttattagaggtaccggaaatggttgagacaagtcttgctattccaaa |
12958345 |
T |
|
| Q |
247 |
atcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatgt |
346 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||| || ||||||||||| ||||||| |||||| |
|
|
| T |
12958344 |
atcactcacatgagcaaccatgtcaccatcaagaaggacattgcttggctttagatcacagtgaaggattaactgctcacattctcgatgaagataatgt |
12958245 |
T |
|
| Q |
347 |
aatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctggatgtagccattgttcta |
446 |
Q |
| |
|
||| ||||||||| || | ||||| || | || ||| |||||| ||| || || || | ||||||| || ||||||| ||| ||||||| |
|
|
| T |
12958244 |
aatgcagaagcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttgttggaggactcgcattcaaaatttgaggatgtaaccactgttcta |
12958145 |
T |
|
| Q |
447 |
ggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttctatg |
546 |
Q |
| |
|
| |||| || | |||||||||||| |||| ||| ||||| |||||||||||||||| || || ||||||||||| |||||| |||||||||||| || |
|
|
| T |
12958144 |
agcttccattttccatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccctaaccaaatttcggtg |
12958045 |
T |
|
| Q |
547 |
cctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatcttctgat |
646 |
Q |
| |
|
|| ||||||| ||||| ||||||||||||||||| ||||||||||||||| | ||||||| ||| ||||| |||||||| ||||||||||| |
|
|
| T |
12958044 |
tctaatatttttgagtgcgttacattcaacaatgaaactcttgtgagctccctttttctggaggttcaagacttttattgcaacaacattatcttctgaa |
12957945 |
T |
|
| Q |
647 |
gcaagatttcctttgtacacagaaccaaaacttcct |
682 |
Q |
| |
|
||| ||||||| |||| || ||||||||||||||| |
|
|
| T |
12957944 |
acaatatttcctctgtatacggaaccaaaacttcct |
12957909 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 155 - 682
Target Start/End: Complemental strand, 12932637 - 12932110
Alignment:
| Q |
155 |
ggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaaatcactca |
254 |
Q |
| |
|
|||||||| ||||| || ||||| | ||| ||||| ||||| | ||| ||||||||| | ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
12932637 |
ggagcataaccaactgttccttttactccgattgtgctagtattcttattagaggtaccggaaatggttgagacaagtcttgctatgccaaaatcactca |
12932538 |
T |
|
| Q |
255 |
catgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatgtaatacaga |
354 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| || ||||||||||| ||||||||||||| ||| |||| |
|
|
| T |
12932537 |
catgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatgaaggattaactgctcacattctcgatgaaggtaatgcaatgcaga |
12932438 |
T |
|
| Q |
355 |
agcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctggatgtagccattgttctaggtttccg |
454 |
Q |
| |
|
||||| || | ||||| || | || ||| |||||| ||| || || || |||||||| | | ||||||| ||| ||||||| | |||| |
|
|
| T |
12932437 |
agcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttgttggaggatttgcattcaaagtctcaggatgtaaccactgttctaagcttcca |
12932338 |
T |
|
| Q |
455 |
ttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttctatgcctcatat |
554 |
Q |
| |
|
|| |||||||||||||| |||| || ||||| |||||||||||||||| || || ||||||||||| ||||||||||||||||||| || || |||| |
|
|
| T |
12932337 |
tttttcatgtattcaaaaactagtgctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaaccaaatttcggtgtctaatat |
12932238 |
T |
|
| Q |
555 |
tttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatcttctgatgcaagatt |
654 |
Q |
| |
|
||| ||||| ||||||||||||||||| ||||||||||||||| | || |||| |||||||| |||||||| ||||||||||| | | ||| |
|
|
| T |
12932237 |
ttttgagtgcgttacattcaacaatgaaactcttgtgagctccctttttttgcagattcaagacctttactgcaacaacattatcttctgacactatatt |
12932138 |
T |
|
| Q |
655 |
tcctttgtacacagaaccaaaacttcct |
682 |
Q |
| |
|
||||||||| || ||||||||||||||| |
|
|
| T |
12932137 |
tcctttgtaaacggaaccaaaacttcct |
12932110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 147 - 721
Target Start/End: Complemental strand, 12899936 - 12899362
Alignment:
| Q |
147 |
tacctggaggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaa |
246 |
Q |
| |
|
|||| ||||||||||| ||||| || ||||| ||||||||||| ||||| | ||| | ||||||| ||| | |||||||||||||||||||||||| |
|
|
| T |
12899936 |
tacccggaggagcataaccaactgttccttttattccaattgtgctagtattcttatgagaggtaccagaaattgttgagacaagtcttgctatgccaaa |
12899837 |
T |
|
| Q |
247 |
atcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatgt |
346 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||| |||||||||||| ||||||| |||||| |
|
|
| T |
12899836 |
atcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttatatcacaatgaaagactaattgctcacattctcgatgaagataatgt |
12899737 |
T |
|
| Q |
347 |
aatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctggatgtagccattgttcta |
446 |
Q |
| |
|
||| ||||||||| || | ||||| || | || ||| |||||| ||| || || || |||||||| | | ||||||| ||||||||||| |
|
|
| T |
12899736 |
aatgcagaagcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttgttggaggatttgcattcaaagtctcgggatgtaaccattgttcta |
12899637 |
T |
|
| Q |
447 |
ggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttctatg |
546 |
Q |
| |
|
| |||| || |||||||||||||| |||| ||| ||||| |||||||||||||||| || || ||||||||||| ||||||||||||||||||| || |
|
|
| T |
12899636 |
agcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaaccaaatttcggtg |
12899537 |
T |
|
| Q |
547 |
cctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatcttctgat |
646 |
Q |
| |
|
| || |||| |||||||||||||| | |||||| ||||||||||| ||| | || |||| |||||||| |||||||| ||||||||||| |
|
|
| T |
12899536 |
tcgaatgtttttgagtgcattacattctaaaatgaaactcttgtgagcaccctttttttgcagattcaagacctttactgcaacaacattatcttctgaa |
12899437 |
T |
|
| Q |
647 |
gcaagatttcctttgtacacagaaccaaaacttcctaatgcaaccaggtttctagcagaaaatccatcagttcct |
721 |
Q |
| |
|
| | ||||||| |||| || ||||||||||||||| || | | || ||||||| | || |||||||| |||||| |
|
|
| T |
12899436 |
actatatttcctctgtatacggaaccaaaacttcctgatccgatcaagtttctatctgagaatccatcggttcct |
12899362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 217 - 682
Target Start/End: Complemental strand, 12907486 - 12907021
Alignment:
| Q |
217 |
aatggctgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgacc |
316 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| | || |
|
|
| T |
12907486 |
aatggttgagacaagtcttgctatgccaaaatcactcaaatgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatggaggatt |
12907387 |
T |
|
| Q |
317 |
gcttgctcacattcatgatgaaggtaatgtaatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcat |
416 |
Q |
| |
|
||||||||||| ||||||| ||||||||| ||||||||| || | ||||| || | || || |||||| ||| || || || ||||| |
|
|
| T |
12907386 |
aactgctcacattctcgatgaagataatgtaatgcagaagcaacatcgatgatgatgtttaatctaagaccaaggttcaatgttgttggaggatttgcat |
12907287 |
T |
|
| Q |
417 |
tcattatacctggatgtagccattgttctaggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaaca |
516 |
Q |
| |
|
||| | | ||||||| ||| ||||||| | |||| || |||||||||||||| |||| ||| ||||| |||||||||||||||| || || ||||| |
|
|
| T |
12907286 |
tcaaagtttcaggatgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaaca |
12907187 |
T |
|
| Q |
517 |
acatgtcaaaaccttaaccaaatttctatgcctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcagg |
616 |
Q |
| |
|
|||||| |||||||||||||||||||| || || ||||||| ||||| ||||||||||||||||| || |||||||| ||| | ||||||| | |
|
|
| T |
12907186 |
acatgttaaaaccttaaccaaatttctgtgtctaatatttttgagtgcgttacattcaacaatgaaacttttgtgagcgccctttgtttggaggttcaag |
12907087 |
T |
|
| Q |
617 |
acctttatggcaacaactttatcttctgatgcaagatttcctttgtacacagaaccaaaacttcct |
682 |
Q |
| |
|
||||||| |||||||| ||||||||||| ||| |||||||||||| || ||||||||||||||| |
|
|
| T |
12907086 |
acctttactgcaacaacattatcttctgaaacaatatttcctttgtatacggaaccaaaacttcct |
12907021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 147; Significance: 5e-77; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 155 - 750
Target Start/End: Original strand, 17923254 - 17923849
Alignment:
| Q |
155 |
ggagcatagccaacagtccctttaattccaattgtactagtttccttgttagaggtattgtcaatggctgagacaagtcttgctatgccaaaatcactca |
254 |
Q |
| |
|
|||||||| ||||| || ||||| ||||| || |||||||| | ||| ||||||||| | ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
17923254 |
ggagcataaccaactgttccttttattccgatcgtactagtattcttattagaggtaccggaaatggttgagacaagtcttgctatgccaaaatcactca |
17923353 |
T |
|
| Q |
255 |
catgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatgatgaaggtaatgtaatacaga |
354 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| || ||||||||||| ||||||||||||| ||| |||| |
|
|
| T |
17923354 |
catgagcaaccatgtcatcatcaagaaggacattgcttggttttagatcacaatgaaggattaactgctcacattctcgatgaaggtaatgcaatgcaga |
17923453 |
T |
|
| Q |
355 |
agcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcattcattatacctggatgtagccattgttctaggtttccg |
454 |
Q |
| |
|
||||| || | ||||| || | || ||| |||||| ||| || || || |||||||| | | ||||||| ||| ||||||| | |||| |
|
|
| T |
17923454 |
agcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttgttggaggatttgcattcaaagtctcaggatgtaaccactgttctaagcttcca |
17923553 |
T |
|
| Q |
455 |
ttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttctatgcctcatat |
554 |
Q |
| |
|
|| |||||||||||||| |||| ||| ||||| |||||||||||||||| || || ||||||||||| ||||||||||||||||||| || || |||| |
|
|
| T |
17923554 |
tttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaacaacatgttaaaaccttaaccaaatttcggtgtctaatat |
17923653 |
T |
|
| Q |
555 |
tttatagtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatcttctgatgcaagatt |
654 |
Q |
| |
|
||| ||||| ||||||||||||| ||| ||||||||||||||| | ||||||| ||| || | |||||||| ||||||||||| ||| ||| |
|
|
| T |
17923654 |
ttttgagtgcgttacattcaacaacgaaactcttgtgagctccctttttatggaggttcaagactttaactgcaacaacattatcttctgaaacaatatt |
17923753 |
T |
|
| Q |
655 |
tcctttgtacacagaaccaaaacttcctaatgcaaccaggtttctagcagaaaatccatcagttccttggtgaaggtctttgtatgaaaccctagc |
750 |
Q |
| |
|
|||| |||| || ||||||||||||||| || | | || ||||||| | || |||||||| |||||| ||| | |||| |||||||||| |||| |
|
|
| T |
17923754 |
tcctctgtatacggaaccaaaacttcctgatccgatcatgtttctatctgagaatccatcggttcctacgtgtaattcttggtatgaaaccttagc |
17923849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0692 (Bit Score: 102; Significance: 3e-50; HSPs: 1)
Name: scaffold0692
Description:
Target: scaffold0692; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 217 - 542
Target Start/End: Complemental strand, 7589 - 7264
Alignment:
| Q |
217 |
aatggctgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgacc |
316 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| | |
|
|
| T |
7589 |
aatggttgagacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcatcatcaagaaggacattgcttggctttagatcacaatgaagtatt |
7490 |
T |
|
| Q |
317 |
gcttgctcacattcatgatgaaggtaatgtaatacagaagcaatgtcaacaatgatattcagtcgttgatcaaggtccaacattctttgaatccctgcat |
416 |
Q |
| |
|
|||||||||||| ||||||| ||||||||| ||||||||| || | ||||| || | || ||| |||||| ||| || || || ||||| |
|
|
| T |
7489 |
aattgctcacattctcgatgaagttaatgtaatgcagaagcaacatcgatgatgatgtttaatctatgaccaaggttcaatgttattggaggatttgcat |
7390 |
T |
|
| Q |
417 |
tcattatacctggatgtagccattgttctaggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaaca |
516 |
Q |
| |
|
||| | | ||||||| ||| ||||||| | |||| || |||||||||||||| |||| ||| ||||| |||||||||||||||| || || ||||| |
|
|
| T |
7389 |
tcaaagtctcaggatgtaaccactgttctaagcttccatttttcatgtattcaaaaactagagctttaaattcttgacctttgtaatttgtgctagaaca |
7290 |
T |
|
| Q |
517 |
acatgtcaaaaccttaaccaaatttc |
542 |
Q |
| |
|
|||||| |||||| |||||||||||| |
|
|
| T |
7289 |
acatgttaaaaccctaaccaaatttc |
7264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 234 - 375
Target Start/End: Original strand, 31467092 - 31467233
Alignment:
| Q |
234 |
ttgctatgccaaaatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatgaccgcttgctcacattcatg |
333 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| ||||||||||| || || || ||||||| ||||||||||||||| | ||||| ||||||||| |
|
|
| T |
31467092 |
ttgctatgccaaaatcactcacatgagctaccatagaatcatcaagaagaacgttgctaggctttaaatcacaatgaatgacaggttgctgacattcatg |
31467191 |
T |
|
| Q |
334 |
atgaaggtaatgtaatacagaagcaatgtcaacaatgatatt |
375 |
Q |
| |
|
|||||| ||||| ||| | ||||||| ||||| ||| ||||| |
|
|
| T |
31467192 |
atgaagataatgaaatgccgaagcaacgtcaataataatatt |
31467233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 442 - 597
Target Start/End: Original strand, 31467300 - 31467455
Alignment:
| Q |
442 |
ttctaggtttccgttgttcatgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaattt |
541 |
Q |
| |
|
||||| | ||||||| |||||||| || || || | ||| ||||| |||||| ||||| |||| ||||| ||||| | ||| |||| ||||||||||||| |
|
|
| T |
31467300 |
ttctaagcttccgtttttcatgtactcgaaaacaagagctttaaattcttgatctttgaaatctgtactggaacagcttgttaaaatcttaaccaaattt |
31467399 |
T |
|
| Q |
542 |
ctatgcctcatattttatagtgcattacattcaacaatgaagctcttgtgagctcc |
597 |
Q |
| |
|
| || || ||||||| |||||||| |||||| ||| ||| |||||||||||||| |
|
|
| T |
31467400 |
cggtgtctaatatttttgagtgcattgcattcagcaaggaaactcttgtgagctcc |
31467455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 39875815 - 39875899
Alignment:
| Q |
227 |
acaagtcttgctatgccaaaatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaa |
311 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||||||||| || |||||||||||||| ||||| |||| ||||||||||| |
|
|
| T |
39875815 |
acaagtctggctaagccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggttttaaatcacaatgaa |
39875899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 39883938 - 39884022
Alignment:
| Q |
227 |
acaagtcttgctatgccaaaatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaa |
311 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||||||||| || |||||||||||||| ||||| |||| ||||||||||| |
|
|
| T |
39883938 |
acaagtctggctaagccaaaatcactcacatgagcaaccatgtcatcgtcaagaaggacattgcttggttttaaatcacaatgaa |
39884022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 39890892 - 39890976
Alignment:
| Q |
227 |
acaagtcttgctatgccaaaatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaa |
311 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||||||||| || |||||||||||||| ||||| |||| ||||||||||| |
|
|
| T |
39890892 |
acaagtctggctaagccaaaatcactcacatgagcaaccatgtcatcttcaagaaggacattgcttggttttaaatcacaatgaa |
39890976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 46; Significance: 9e-17; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 229 - 314
Target Start/End: Complemental strand, 28605907 - 28605822
Alignment:
| Q |
229 |
aagtcttgctatgccaaaatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatga |
314 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| | || |||||| | ||| |||||||||| |||||||||||||| |
|
|
| T |
28605907 |
aagtcttgcttgtccaaaatcactcacatgagcaaccatgtcattatgaagaagaatattgcttggctttaaatcacaatgaatga |
28605822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 460 - 677
Target Start/End: Complemental strand, 28605679 - 28605462
Alignment:
| Q |
460 |
catgtattcaaacactaaagccttaaactcttgacctttgtaatcggtactcgaacaacatgtcaaaaccttaaccaaatttctatgcctcatattttat |
559 |
Q |
| |
|
|||||| ||||| |||||||| || || || | ||| |||||||| |||| ||||||||||| |||| ||| || | ||| ||||| | ||| ||| |
|
|
| T |
28605679 |
catgtactcaaaaactaaagctttgaattcattaccattgtaatccatacttgaacaacatgttaaaatcttgacaagattcctatgacggatacttttg |
28605580 |
T |
|
| Q |
560 |
agtgcattacattcaacaatgaagctcttgtgagctcccnnnnnnngaaggttcaggacctttatggcaacaactttatcttctgatgcaagatttcctt |
659 |
Q |
| |
|
|||||||| |||||| | ||||| |||||||| |||||| ||||||||| ||||||||| ||||||||| | |||||||| ||||| |||||| |
|
|
| T |
28605579 |
agtgcattgcattcagcgatgaaactcttgtgcgctcccctgacttgaaggttcaagacctttatagcaacaactctttcttctgactcaagaattcctt |
28605480 |
T |
|
| Q |
660 |
tgtacacagaaccaaaac |
677 |
Q |
| |
|
| || ||| | ||||||| |
|
|
| T |
28605479 |
tatatacaaatccaaaac |
28605462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 242 - 309
Target Start/End: Complemental strand, 22900622 - 22900555
Alignment:
| Q |
242 |
ccaaaatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatg |
309 |
Q |
| |
|
||||||||||| ||||| |||||||| || || || || | ||||||||| ||||||||||||||||| |
|
|
| T |
22900622 |
ccaaaatcactaacatgtgcaaccatatcttcgtccagcaagacattactaggctttagatcacaatg |
22900555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 27723898 - 27723947
Alignment:
| Q |
146 |
gtacctggaggagcatagccaacagtccctttaattccaattgtactagt |
195 |
Q |
| |
|
||||||||||||||||| |||| ||| || |||||||||||||| ||||| |
|
|
| T |
27723898 |
gtacctggaggagcatatccaatagttcccttaattccaattgtgctagt |
27723947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 314
Target Start/End: Original strand, 27723977 - 27724066
Alignment:
| Q |
225 |
agacaagtcttgctatgccaaaatcactcacatgagcaaccatgtcgtcatcaagaaggacattacttggctttagatcacaatgaatga |
314 |
Q |
| |
|
|||||||| |||||| ||||||||||| ||| ||||||||||||| | |||||||| | ||| |||| |||| ||||||||| |||| |
|
|
| T |
27723977 |
agacaagttttgctagtccaaaatcactaacacgagcaaccatgtcattgtcaagaagaatgttatttggttttaaatcacaatggatga |
27724066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 649 - 682
Target Start/End: Complemental strand, 24661888 - 24661855
Alignment:
| Q |
649 |
aagatttcctttgtacacagaaccaaaacttcct |
682 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |
|
|
| T |
24661888 |
aagagttcctttgtacacagaaccaaaacttcct |
24661855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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