View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17822_high_12 (Length: 219)
Name: NF17822_high_12
Description: NF17822
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17822_high_12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 31636942 - 31636724
Alignment:
| Q |
1 |
tgataagataatagagcaagtaaacacgtattccatgcccttaatcaatttatttatgaagagactaatataaaggtggtcaacaaatgactaccatttc |
100 |
Q |
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| T |
31636942 |
tgataagataatagagcaagtaaacacgtattccatgcccttaatcaatttatttatgaagagactaatataaaggtggtcaacaaatgactactacttc |
31636843 |
T |
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| Q |
101 |
ctttctggaagcatggaactttgaaatatatataatactggtctaggggtgtgtatacaacattacattatacgactacggttagctgaggtaattaatt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31636842 |
ctttctggaagcatggaactttgaaatatatataatagtggtctagtggtgcgtatacaacattacattatacgactacggttagctgaggtaattaatt |
31636743 |
T |
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| Q |
201 |
ctgcatttgccgttaccct |
219 |
Q |
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||||||||||||||||||| |
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| T |
31636742 |
ctgcatttgccgttaccct |
31636724 |
T |
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