View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17823_low_5 (Length: 265)

Name: NF17823_low_5
Description: NF17823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17823_low_5
NF17823_low_5
[»] chr3 (24 HSPs)
chr3 (14-264)||(3263924-3264174)
chr3 (14-263)||(36528709-36528958)
chr3 (16-91)||(16979926-16980001)
chr3 (16-90)||(15446831-15446905)
chr3 (16-99)||(24177699-24177782)
chr3 (16-73)||(37641467-37641524)
chr3 (16-91)||(52988821-52988896)
chr3 (21-86)||(14967203-14967268)
chr3 (52-117)||(16050915-16050980)
chr3 (16-61)||(31223815-31223860)
chr3 (52-121)||(40807980-40808049)
chr3 (52-121)||(44274402-44274471)
chr3 (52-120)||(12509349-12509417)
chr3 (53-121)||(17044950-17045018)
chr3 (53-121)||(17047110-17047178)
chr3 (53-121)||(22306583-22306651)
chr3 (52-99)||(11563731-11563778)
chr3 (53-99)||(22652779-22652825)
chr3 (197-263)||(52989045-52989111)
chr3 (52-121)||(10563692-10563761)
chr3 (53-114)||(17541425-17541486)
chr3 (52-121)||(40812817-40812886)
chr3 (52-121)||(49900714-49900783)
chr3 (53-121)||(35354586-35354654)
[»] chr4 (15 HSPs)
chr4 (129-264)||(14185882-14186017)
chr4 (16-91)||(15008977-15009052)
chr4 (14-90)||(14186973-14187049)
chr4 (16-119)||(40620517-40620621)
chr4 (24-91)||(10057675-10057742)
chr4 (52-121)||(15613074-15613143)
chr4 (52-121)||(15115206-15115275)
chr4 (52-121)||(51993545-51993614)
chr4 (53-121)||(11425927-11425995)
chr4 (53-121)||(16998509-16998577)
chr4 (53-121)||(25091637-25091705)
chr4 (53-121)||(53630474-53630542)
chr4 (52-121)||(37019654-37019723)
chr4 (197-257)||(10057480-10057540)
chr4 (53-121)||(10356436-10356504)
[»] scaffold0034 (1 HSPs)
scaffold0034 (16-91)||(29179-29254)
[»] chr1 (13 HSPs)
chr1 (16-99)||(46197708-46197791)
chr1 (16-91)||(29763595-29763670)
chr1 (16-90)||(12327706-12327780)
chr1 (16-90)||(51336494-51336568)
chr1 (196-263)||(21995850-21995917)
chr1 (16-91)||(50001490-50001565)
chr1 (16-77)||(21995627-21995688)
chr1 (16-68)||(24007188-24007240)
chr1 (53-121)||(19676695-19676763)
chr1 (53-121)||(21046049-21046117)
chr1 (52-121)||(42697767-42697837)
chr1 (52-121)||(16058313-16058382)
chr1 (52-121)||(42913033-42913102)
[»] chr2 (23 HSPs)
chr2 (18-99)||(21080934-21081015)
chr2 (16-90)||(357896-357970)
chr2 (16-121)||(40912304-40912409)
chr2 (16-91)||(21915638-21915713)
chr2 (16-91)||(25184203-25184278)
chr2 (18-77)||(34858157-34858216)
chr2 (18-77)||(34873219-34873278)
chr2 (197-263)||(20916107-20916173)
chr2 (16-68)||(34491203-34491255)
chr2 (16-58)||(18240824-18240866)
chr2 (52-121)||(22501954-22502024)
chr2 (52-121)||(22509888-22509958)
chr2 (197-263)||(34858379-34858445)
chr2 (197-263)||(34873441-34873507)
chr2 (52-121)||(24516170-24516239)
chr2 (52-121)||(25046101-25046171)
chr2 (197-263)||(27473255-27473321)
chr2 (52-121)||(17307470-17307539)
chr2 (53-121)||(2523747-2523815)
chr2 (53-121)||(5031129-5031197)
chr2 (53-119)||(24780840-24780906)
chr2 (16-78)||(27484452-27484514)
chr2 (53-121)||(9975913-9975981)
[»] scaffold0515 (1 HSPs)
scaffold0515 (16-99)||(5035-5118)
[»] scaffold0306 (1 HSPs)
scaffold0306 (16-99)||(5035-5118)
[»] scaffold0138 (2 HSPs)
scaffold0138 (16-91)||(21111-21186)
scaffold0138 (16-91)||(34126-34201)
[»] scaffold0057 (1 HSPs)
scaffold0057 (16-99)||(69816-69899)
[»] chr8 (20 HSPs)
chr8 (16-91)||(23479096-23479171)
chr8 (16-89)||(19880838-19880911)
chr8 (52-173)||(20397509-20397632)
chr8 (16-91)||(16198850-16198925)
chr8 (16-91)||(17158926-17159001)
chr8 (16-91)||(26454722-26454797)
chr8 (16-83)||(41680096-41680163)
chr8 (53-121)||(39936007-39936075)
chr8 (16-91)||(22237013-22237088)
chr8 (197-263)||(22237237-22237303)
chr8 (16-83)||(12577901-12577968)
chr8 (52-118)||(23419427-23419494)
chr8 (63-121)||(5082222-5082280)
chr8 (197-263)||(19807581-19807647)
chr8 (52-147)||(22583659-22583756)
chr8 (52-121)||(5761518-5761586)
chr8 (52-121)||(6101752-6101821)
chr8 (52-116)||(4380616-4380680)
chr8 (53-121)||(20083638-20083706)
chr8 (53-121)||(42817907-42817975)
[»] chr5 (17 HSPs)
chr5 (16-90)||(10774627-10774701)
chr5 (16-91)||(17011742-17011817)
chr5 (16-90)||(31456975-31457049)
chr5 (16-91)||(21554266-21554341)
chr5 (16-99)||(29448846-29448929)
chr5 (16-86)||(21556912-21556982)
chr5 (16-90)||(30616629-30616703)
chr5 (16-91)||(26832635-26832710)
chr5 (16-58)||(22240882-22240924)
chr5 (16-58)||(22241878-22241920)
chr5 (16-58)||(22242874-22242916)
chr5 (16-58)||(22243870-22243912)
chr5 (52-121)||(10954073-10954142)
chr5 (52-173)||(31622047-31622170)
chr5 (53-99)||(266044-266090)
chr5 (52-97)||(20469175-20469220)
chr5 (52-97)||(21617927-21617972)
[»] chr6 (17 HSPs)
chr6 (16-121)||(27329944-27330049)
chr6 (16-121)||(27390684-27390789)
chr6 (16-91)||(15173416-15173491)
chr6 (15-91)||(28103410-28103486)
chr6 (16-91)||(15900617-15900692)
chr6 (16-91)||(27852220-27852295)
chr6 (197-263)||(20733431-20733497)
chr6 (197-263)||(27852005-27852071)
chr6 (52-121)||(15890711-15890780)
chr6 (16-77)||(20733207-20733268)
chr6 (53-114)||(18703559-18703620)
chr6 (53-114)||(18709494-18709555)
chr6 (53-121)||(7827956-7828024)
chr6 (53-121)||(19655231-19655299)
chr6 (53-121)||(23150287-23150355)
chr6 (54-121)||(24267833-24267900)
chr6 (52-120)||(12041619-12041688)
[»] scaffold0058 (1 HSPs)
scaffold0058 (16-91)||(6382-6457)
[»] chr7 (26 HSPs)
chr7 (16-91)||(29052145-29052220)
chr7 (16-91)||(16549968-16550043)
chr7 (16-91)||(16615619-16615694)
chr7 (16-91)||(30820114-30820189)
chr7 (16-73)||(19485936-19485993)
chr7 (16-91)||(36685109-36685184)
chr7 (197-263)||(11091446-11091512)
chr7 (52-121)||(12127162-12127231)
chr7 (40-121)||(13147459-13147540)
chr7 (16-77)||(46579722-46579783)
chr7 (53-121)||(20620270-20620338)
chr7 (52-121)||(20586336-20586405)
chr7 (52-121)||(24269946-24270015)
chr7 (53-121)||(8851159-8851227)
chr7 (53-121)||(12372258-12372326)
chr7 (53-121)||(12465260-12465328)
chr7 (52-99)||(35771440-35771487)
chr7 (52-118)||(10658850-10658916)
chr7 (53-103)||(16078332-16078382)
chr7 (53-99)||(18074647-18074693)
chr7 (52-97)||(4071828-4071873)
chr7 (52-117)||(12754611-12754676)
chr7 (53-121)||(11067452-11067520)
chr7 (53-121)||(12322930-12322998)
chr7 (53-121)||(32433589-32433657)
chr7 (207-263)||(46579918-46579974)
[»] scaffold0436 (1 HSPs)
scaffold0436 (18-91)||(8974-9047)
[»] scaffold0046 (1 HSPs)
scaffold0046 (16-91)||(21740-21815)
[»] scaffold0819 (1 HSPs)
scaffold0819 (16-90)||(5381-5455)
[»] scaffold0104 (2 HSPs)
scaffold0104 (16-90)||(14972-15046)
scaffold0104 (16-90)||(16992-17066)
[»] scaffold0071 (1 HSPs)
scaffold0071 (16-90)||(15287-15361)
[»] scaffold0632 (1 HSPs)
scaffold0632 (16-123)||(1147-1254)
[»] scaffold0577 (1 HSPs)
scaffold0577 (16-91)||(9073-9148)
[»] scaffold0462 (1 HSPs)
scaffold0462 (16-91)||(11237-11312)
[»] scaffold0083 (1 HSPs)
scaffold0083 (16-91)||(1951-2026)
[»] scaffold0074 (1 HSPs)
scaffold0074 (197-263)||(1737-1803)
[»] scaffold0156 (1 HSPs)
scaffold0156 (16-120)||(16589-16693)
[»] scaffold0686 (2 HSPs)
scaffold0686 (197-263)||(1238-1304)
scaffold0686 (16-72)||(1471-1527)
[»] scaffold0174 (2 HSPs)
scaffold0174 (197-263)||(13436-13502)
scaffold0174 (16-91)||(13651-13726)
[»] scaffold0153 (4 HSPs)
scaffold0153 (197-263)||(5099-5165)
scaffold0153 (197-263)||(12119-12185)
scaffold0153 (28-77)||(5325-5374)
scaffold0153 (28-77)||(12345-12394)
[»] scaffold1941 (1 HSPs)
scaffold1941 (52-121)||(122-191)
[»] scaffold0671 (1 HSPs)
scaffold0671 (52-121)||(4923-4993)
[»] scaffold0112 (1 HSPs)
scaffold0112 (52-144)||(2848-2942)
[»] scaffold0032 (1 HSPs)
scaffold0032 (197-263)||(68096-68162)
[»] scaffold1766 (1 HSPs)
scaffold1766 (52-121)||(695-764)
[»] scaffold0077 (1 HSPs)
scaffold0077 (52-121)||(5934-6003)
[»] scaffold1633 (1 HSPs)
scaffold1633 (53-121)||(1189-1257)
[»] scaffold1283 (1 HSPs)
scaffold1283 (53-121)||(468-536)
[»] scaffold0036 (1 HSPs)
scaffold0036 (53-121)||(78185-78253)
[»] scaffold0019 (1 HSPs)
scaffold0019 (53-121)||(24131-24199)
[»] scaffold0802 (1 HSPs)
scaffold0802 (52-99)||(4708-4755)
[»] scaffold0139 (1 HSPs)
scaffold0139 (16-83)||(23556-23623)
[»] scaffold0111 (1 HSPs)
scaffold0111 (54-121)||(12534-12601)
[»] scaffold0113 (1 HSPs)
scaffold0113 (39-121)||(35474-35555)
[»] scaffold0037 (1 HSPs)
scaffold0037 (51-97)||(117805-117851)
[»] scaffold0956 (1 HSPs)
scaffold0956 (56-121)||(2539-2604)
[»] scaffold0379 (1 HSPs)
scaffold0379 (57-144)||(10757-10846)
[»] scaffold0207 (1 HSPs)
scaffold0207 (52-121)||(13391-13460)
[»] scaffold0064 (1 HSPs)
scaffold0064 (40-121)||(58730-58811)
[»] scaffold0020 (2 HSPs)
scaffold0020 (52-121)||(168998-169067)
scaffold0020 (53-121)||(143595-143663)
[»] scaffold0001 (3 HSPs)
scaffold0001 (52-121)||(77671-77740)
scaffold0001 (53-121)||(31978-32046)
scaffold0001 (53-121)||(37285-37353)
[»] scaffold0737 (1 HSPs)
scaffold0737 (53-121)||(4714-4782)
[»] scaffold0149 (1 HSPs)
scaffold0149 (52-120)||(29572-29640)
[»] scaffold0047 (1 HSPs)
scaffold0047 (53-121)||(79033-79101)


Alignment Details
Target: chr3 (Bit Score: 231; Significance: 1e-127; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 14 - 264
Target Start/End: Original strand, 3263924 - 3264174
Alignment:
Q  14 gaagaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggttt 113  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3263924 gaagaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtcggattaaccttctctaattctaagtaatataattatgagattgggttt 3264023  T
Q  114 aacatgttttgttgtgaatttgagaattagggttgagaattgtaataggttgttaatagatttgagaacccctttgaatttgcatacagtagattgatca 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  3264024 aacatgttttgttgtgaatttgagaattagggttgagaattgtaataggttgttaatagatttgagaacccctttgaatttgcatacagtagattgatga 3264123  T
Q  214 ataattggtgttctaatgataagttaatcatagggtaatgattagggtcaa 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3264124 ataattggtgttctaatgataagttaatcatagggtaatgattagggtcaa 3264174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 14 - 263
Target Start/End: Complemental strand, 36528958 - 36528709
Alignment:
Q  14 gaagaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggttt 113  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  36528958 gaagaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggattaactttctctaattctaagtaatataattctgagattgggttt 36528859  T
Q  114 aacatgttttgttgtgaatttgagaattagggttgagaattgtaataggttgttaatagatttgagaacccctttgaatttgcatacagtagattgatca 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||| |    
T  36528858 aacatgttttgttgtgaatttgagaattagggttgagaattgtaacaggttgttaatagatttaagaacccctttgaatttgcatacagtaggttgatga 36528759  T
Q  214 ataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||||||||    
T  36528758 ataattggtgttataacgataggttaatcatagggtaatgattagggtca 36528709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 16980001 - 16979926
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||| |||||| |||| |||| ||||||||||||    
T  16980001 agaaccaagagagagagagaccgtcgatcatcaatactaaggtaagggtgggactaactttctttaattctaagta 16979926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 15446831 - 15446905
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagt 90  Q
    ||||||||||||||||| || || ||||||||| |||||||||||| |||||| |||| ||||||||||||||||    
T  15446831 agaaccaagagggagagagatcgccgatcatcattactaaggtaagggtgggactaactttctctaattctaagt 15446905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 24177699 - 24177782
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagtaatataatt 99  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||  ||| |||||||||| |||||  |||||||    
T  24177699 agaaccaagagggagagagaccgccgattatcaatactaaggtaagggtgggacaaactttctctaattataagttgtataatt 24177782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 37641467 - 37641524
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaac 73  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| |||||| ||||    
T  37641467 agaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaac 37641524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 52988821 - 52988896
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||| ||| || ||||||||  ||||||| ||||    
T  52988821 agaaccaagagggagagagaccgcagatcatcaatactaaggtaagggtgagactaaccttcaataattctgagta 52988896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 14967268 - 14967203
Alignment:
Q  21 caagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattct 86  Q
    |||||||||||| ||||| |||||||||||||||||||||| | |||| ||||||||  |||||||    
T  14967268 caagagggagagagaccgccgatcatcaatactaaggtaagggggggactaaccttcaataattct 14967203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 16050980 - 16050915
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaaca 117  Q
    |||||||||| |||||| |||| ||||||||||||||||  ||| ||| ||| |||||||||||||    
T  16050980 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaaca 16050915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 31223815 - 31223860
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaag 61  Q
    ||||||||||||||||| ||||  ||||||||||||||||||||||    
T  31223815 agaaccaagagggagagagaccaccgatcatcaatactaaggtaag 31223860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 40808049 - 40807980
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  40808049 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 40807980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 44274471 - 44274402
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  44274471 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 44274402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 12509349 - 12509417
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgt 120  Q
    |||||||||| ||||||  |||||||| |||||||||||  ||||||| ||| ||||| ||||||||||    
T  12509349 ctaaggtaagggtgggacaaaccttctttaattctaagttgtataattctgaaattggatttaacatgt 12509417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 17045018 - 17044950
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  17045018 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 17044950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 17047178 - 17047110
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  17047178 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 17047110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 22306583 - 22306651
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  22306583 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 22306651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 11563778 - 11563731
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataatt 99  Q
    |||||||||| |||||| |||||||||||||||||||||  |||||||    
T  11563778 ctaaggtaagggtgggactaaccttctctaattctaagtggtataatt 11563731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 22652825 - 22652779
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataatt 99  Q
    ||||||||| |||||| |||| ||||||||||||||||||| |||||    
T  22652825 taaggtaagagtgggactaactttctctaattctaagtaatttaatt 22652779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 52989045 - 52989111
Alignment:
Q  197 atacagtagattgatcaataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    ||||||||| ||||| ||||||| ||||| |||||||| | | |||||| | |||||||||||||||    
T  52989045 atacagtaggttgatgaataattagtgttataatgatagggtgatcatatgataatgattagggtca 52989111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 10563761 - 10563692
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||  |||||| |||| |||||||||| |||||  ||||||||||| |||| ||||| ||||||    
T  10563761 ctaaggtaatggtgggactaactttctctaattttaagttgtataattatgaaattgagtttagcatgtt 10563692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 17541486 - 17541425
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggttta 114  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| |||||    
T  17541486 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttta 17541425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 40812886 - 40812817
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| |||||| |||| ||||||||||||||||   |||||| ||| |||| ||||| ||||||    
T  40812886 ctaaggtaagggtgggactaactttctctaattctaagttgcataattctgaaattgagtttagcatgtt 40812817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 49900783 - 49900714
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| |||||| |||  ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  49900783 ctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaattgagtttagcatgtt 49900714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 35354654 - 35354586
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||| ||||||||||| |||| |||||||||| |||||  ||||||| ||| |||| ||||| ||||||    
T  35354654 taagctaagtgtgggactaactttctctaattttaagttgtataattctgaaattgagtttagcatgtt 35354586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 9e-48; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 129 - 264
Target Start/End: Complemental strand, 14186017 - 14185882
Alignment:
Q  129 gaatttgagaattagggttga-gaattgtaataggttgttaatagatttgagaacccctttgaatttgcatacagtagattgatcaataattggtgttct 227  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| |||||||||||||||    
T  14186017 gaatttgagaattaaggtttaagaattgtaataggttgttaatagatttgagaacct-tttgaatttgcatacagtaggttgatgaataattggtgttct 14185919  T
Q  228 aatgataagttaatcatagggtaatgattagggtcaa 264  Q
    ||||||| |||||||||||||||||||||||||||||    
T  14185918 aatgataggttaatcatagggtaatgattagggtcaa 14185882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 15009052 - 15008977
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  15009052 agaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagta 15008977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 14187049 - 14186973
Alignment:
Q  14 gaagaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagt 90  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||||    
T  14187049 gaagaaccacgagggagagagaccgccgatcatcaatactaaggtaagggtgggagtaactttctctaattctaagt 14186973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 40620621 - 40620517
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagtaatataattatg-agattgggttta 114  Q
    ||||| ||||||||||| ||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||||| | ||||| || | ||||| ||||    
T  40620621 agaactaagagggagagagaccgccgatcatcaatactaaggtaagggtgggaataactttctctaattctaagtattttaattctgaaaattggattta 40620522  T
Q  115 acatg 119  Q
    |||||    
T  40620521 acatg 40620517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 10057742 - 10057675
Alignment:
Q  24 gagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||| ||||| |||||||||||||||||||||| |||||| ||||||||  ||||||| ||||    
T  10057742 gagggagagagaccgccgatcatcaatactaaggtaagggtgggactaaccttcaataattctgagta 10057675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 15613143 - 15613074
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| |||||| ||||||||| |||||||||||  ||||||| ||| ||||| |||||||||||    
T  15613143 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattggatttaacatgtt 15613074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 15115275 - 15115206
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  15115275 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 15115206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 51993614 - 51993545
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| |||||| ||||||||| |||||||||||  | ||||| ||| ||||| |||||||||||    
T  51993614 ctaaggtaagggtgggactaaccttctttaattctaagttgtgtaattctgaaattggatttaacatgtt 51993545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 11425995 - 11425927
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  11425995 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 11425927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 16998577 - 16998509
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| ||| || |||| ||||||||||||||||  ||||||||||| |||| ||||| ||||||    
T  16998577 taaggtaagagtgagactaactttctctaattctaagttgtataattatgaaattgagtttagcatgtt 16998509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 25091705 - 25091637
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  25091705 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 25091637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 53630474 - 53630542
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  53630474 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 53630542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 37019723 - 37019654
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| ||| || |||| |||||||||| |||||  ||||||| ||| |||| ||||||||||||    
T  37019723 ctaaggtaagggtgtgactaactttctctaattttaagttgtataattctgaaattgagtttaacatgtt 37019654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 10057540 - 10057480
Alignment:
Q  197 atacagtagattgatcaataattggtgttctaatgataagttaatcatagggtaatgatta 257  Q
    ||||||||| ||||| ||||||| | ||| |||||||| | | ||||||||||||||||||    
T  10057540 atacagtaggttgatgaataattagagttataatgatagggtgatcatagggtaatgatta 10057480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 10356436 - 10356504
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||  ||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  10356436 taaggtaaggttgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 10356504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 29179 - 29254
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  29179 agaaccaagagggagagagaccgtcgatcatcaatactaaggtaagagtgggactaactttctctaattctaagta 29254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 46197708 - 46197791
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagtaatataatt 99  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||| |||||| |||| ||||||||||||||||||| |||||    
T  46197708 agaaccaagagggagagagactgtcgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaatt 46197791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 29763595 - 29763670
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  29763595 agaaccaagagggagagagaccgacgatcatcaatactaaggtaagggtgggactaactttctctaattctaagta 29763670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 12327706 - 12327780
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagt 90  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| ||| || |||| ||||||||||||||||    
T  12327706 agaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagt 12327780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 51336568 - 51336494
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagt 90  Q
    ||||||||||||||| | ||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||||    
T  51336568 agaaccaagagggagggagaccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 51336494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 21995850 - 21995917
Alignment:
Q  196 catacagtagattgatcaataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    |||||||||| ||||| ||||||| ||||| |||||||| ||| ||||||||||||||||||||||||    
T  21995850 catacagtaggttgatgaataattagtgttataatgataggttgatcatagggtaatgattagggtca 21995917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 50001565 - 50001490
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    |||| ||| |||||||| ||||| |||||||||||||||||||||| |||||| |||| |||| ||||||||||||    
T  50001565 agaatcaaaagggagagagaccgccgatcatcaatactaaggtaagggtgggactaactttctttaattctaagta 50001490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 21995627 - 21995688
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttc 77  Q
    ||||||||||||||||| ||||| ||||||||||||||||| |||| |||||| ||||||||    
T  21995627 agaaccaagagggagagagaccgccgatcatcaatactaagataagggtgggactaaccttc 21995688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 24007188 - 24007240
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtggga 68  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  24007188 agaaccaagagggagagagaccgtcgatcatctatactaaggtaagggtggga 24007240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 19676763 - 19676695
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  19676763 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 19676695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 21046049 - 21046117
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  21046049 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 21046117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 42697837 - 42697767
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgag-attgggtttaacatgtt 121  Q
    |||||||||| ||| || ||||||||| |||||||||||  ||||||| |||| ||||| |||||||||||    
T  42697837 ctaaggtaagggtgagactaaccttctttaattctaagttgtataattctgagaattggatttaacatgtt 42697767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 16058313 - 16058382
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| |||||| |||  ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  16058313 ctaaggtaagggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttagcatgtt 16058382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 42913102 - 42913033
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| ||| || |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  42913102 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 42913033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 21080934 - 21081015
Alignment:
Q  18 aaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagtaatataatt 99  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||||||| |||||    
T  21080934 aaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaatt 21081015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 357970 - 357896
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagt 90  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| |||||| |||| ||||||||||||||||    
T  357970 agaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 357896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 40912409 - 40912304
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaa 115  Q
    ||||||||||| ||||| |||   |||||||||||||||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| |||||     
T  40912409 agaaccaagagagagagagacaaccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttag 40912310  T
Q  116 catgtt 121  Q
    ||||||    
T  40912309 catgtt 40912304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 21915713 - 21915638
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||| ||| || |||| |||||||||||||||||    
T  21915713 agaaccaagagggagagagaccgccgatcatcaatactaaagtaagggtgtgactaactttctctaattctaagta 21915638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 25184278 - 25184203
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||| ||||||||||| ||||| | |||||||||||||||||||| ||| || |||| |||||||||||||||||    
T  25184278 agaacgaagagggagagagaccgccaatcatcaatactaaggtaagggtgagactaactttctctaattctaagta 25184203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 34858157 - 34858216
Alignment:
Q  18 aaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttc 77  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| |||||| ||||||||    
T  34858157 aaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaaccttc 34858216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 34873219 - 34873278
Alignment:
Q  18 aaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttc 77  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| |||||| ||||||||    
T  34873219 aaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaaccttc 34873278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 20916173 - 20916107
Alignment:
Q  197 atacagtagattgatcaataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    ||||||||| ||||| ||||||| ||||| ||||||||  |||||||||||||||||||||||||||    
T  20916173 atacagtaggttgatgaataattagtgttataatgatagattaatcatagggtaatgattagggtca 20916107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 34491203 - 34491255
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtggga 68  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| ||||||    
T  34491203 agaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtggga 34491255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 18240866 - 18240824
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggt 58  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  18240866 agaaccaagagggagagagaccgtcgatcatcaatactaaggt 18240824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 22502024 - 22501954
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgag-attgggtttaacatgtt 121  Q
    |||||||||| |||||| |||| ||||||||||||||||||| ||||| |||| ||||| |||||||||||    
T  22502024 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgtt 22501954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 22509958 - 22509888
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgag-attgggtttaacatgtt 121  Q
    |||||||||| |||||| |||| ||||||||||||||||||| ||||| |||| ||||| |||||||||||    
T  22509958 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgtt 22509888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 34858379 - 34858445
Alignment:
Q  197 atacagtagattgatcaataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    ||||||||| ||||| ||||||| ||||| |||||||| | | ||||||||||||||||||||||||    
T  34858379 atacagtaggttgatgaataattagtgttataatgatagggtgatcatagggtaatgattagggtca 34858445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 34873441 - 34873507
Alignment:
Q  197 atacagtagattgatcaataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    ||||||||| ||||| ||||||| ||||| |||||||| | | ||||||||||||||||||||||||    
T  34873441 atacagtaggttgatgaataattagtgttataatgatagggtgatcatagggtaatgattagggtca 34873507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 24516239 - 24516170
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||||||||||    
T  24516239 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgtt 24516170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 25046171 - 25046101
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgag-attgggtttaacatgtt 121  Q
    |||||||||| |||||| ||||||||| |||||||||||  ||||||| |||| ||||| |||||||||||    
T  25046171 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatgtt 25046101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 27473321 - 27473255
Alignment:
Q  197 atacagtagattgatcaataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    ||||||||| ||||| ||||||| ||||| |||||||| | |  |||||||||||||||||||||||    
T  27473321 atacagtaggttgatgaataattagtgttataatgatagggtggtcatagggtaatgattagggtca 27473255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 17307539 - 17307470
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  17307539 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 17307470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 2523747 - 2523815
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| | | |||| ||||||||||||    
T  2523747 taaggtaagggtgggactaactttctctaattctaagttgtataattcttaaattgagtttaacatgtt 2523815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 5031129 - 5031197
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  5031129 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 5031197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 119
Target Start/End: Original strand, 24780840 - 24780906
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatg 119  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||    
T  24780840 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatg 24780906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 27484452 - 27484514
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttct 78  Q
    |||||||||||||||||  |||  |||||||||||||||||||||| ||| || |||| ||||    
T  27484452 agaaccaagagggagagataccaccgatcatcaatactaaggtaagggtgagactaactttct 27484514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 9975981 - 9975913
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| || ||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  9975981 taaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 9975913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 5118 - 5035
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagtaatataatt 99  Q
    ||||||||||||||||| ||| | |||||||||||||||||||||| |||||| |||| ||||||||||||||||||| |||||    
T  5118 agaaccaagagggagagagactgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaatt 5035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 5118 - 5035
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagtaatataatt 99  Q
    ||||||||||||||||| ||| | |||||||||||||||||||||| |||||| |||| ||||||||||||||||||| |||||    
T  5118 agaaccaagagggagagagactgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaatt 5035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 21186 - 21111
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  21186 agaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagta 21111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 34201 - 34126
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  34201 agaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagta 34126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 69816 - 69899
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagtaatataatt 99  Q
    ||||||||||||||||| ||| | |||||||||||||||||||||| |||||| |||| ||||||||||||||||||| |||||    
T  69816 agaaccaagagggagagagactgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaatt 69899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 23479171 - 23479096
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  23479171 agaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagta 23479096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 19880911 - 19880838
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaag 89  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| |||||| |||| |||||||||||||||    
T  19880911 agaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaag 19880838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 20397509 - 20397632
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt-ttgttgtgaatttgagaattagggttgag 150  Q
    |||||||||| ||||||||||| ||||||||||||||||  ||||||| ||| |||| ||||| |||||| ||||||||| |||| |||||||| || |     
T  20397509 ctaaggtaagggtgggattaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgttgttgtgattttgggaattaggttttaa 20397608  T
Q  151 aattgtaa-taggttgttaataga 173  Q
    | |||||| |||||||||||||||    
T  20397609 agttgtaattaggttgttaataga 20397632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 16198925 - 16198850
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||  |||||| |||| |||||||||||||||||    
T  16198925 agaaccaagagggagagagaccaccgatcatcaatactaaggtaaaagtgggactaactttctctaattctaagta 16198850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 17158926 - 17159001
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||| ||||||| ||||  |||||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  17158926 agaaccaagggggagagagaccaccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagta 17159001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 26454797 - 26454722
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||  || || |||||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  26454797 agaaccaagagggagaaagatcgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagta 26454722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 41680096 - 41680163
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaat 83  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||  |||||| ||||||||| ||||    
T  41680096 agaaccaagagggagagagaccgccgatcatcaatactaaggtaaaggtgggactaaccttctttaat 41680163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 39936007 - 39936075
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| ||||||||||| ||||||||||||||||  ||||||||||| |||| ||||| ||||||    
T  39936007 taaggtaagggtgggattaactttctctaattctaagttgtataattatgaaattgagtttagcatgtt 39936075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 22237013 - 22237088
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    |||||||||| |||||| ||||| |||||||||||||||||||||| |||||| ||| ||||  ||||||| ||||    
T  22237013 agaaccaagaaggagagagaccgccgatcatcaatactaaggtaagggtgggagtaatcttcaataattctgagta 22237088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 22237237 - 22237303
Alignment:
Q  197 atacagtagattgatcaataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    ||||||||| ||||| ||||||||||||| |||||||| | | || |||||||||||||||||||||    
T  22237237 atacagtaggttgatgaataattggtgttataatgatagggtgattatagggtaatgattagggtca 22237303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 12577968 - 12577901
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaat 83  Q
    |||| |||||||||||| ||| |  ||||||||||||||||||||| |||||| |||| |||||||||    
T  12577968 agaatcaagagggagagagactgctgatcatcaatactaaggtaagggtgggactaactttctctaat 12577901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 23419494 - 23419427
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgag-attgggtttaacat 118  Q
    |||||||||| |||||| ||||||||| |||||||||||  ||||||| |||| ||||| ||||||||    
T  23419494 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacat 23419427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 5082222 - 5082280
Alignment:
Q  63 gtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||| |||| ||||||||||||||||  ||||||||||| |||| ||||| ||||||    
T  5082222 gtgggactaactttctctaattctaagttgtataattatgaaattgagtttagcatgtt 5082280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 19807581 - 19807647
Alignment:
Q  197 atacagtagattgatcaataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    ||||||||| ||||| ||||||| ||||| |||||| | | | |||||||||||||| |||||||||    
T  19807581 atacagtaggttgatgaataattagtgttataatgacagggtgatcatagggtaatggttagggtca 19807647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 22583659 - 22583756
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgt--tttgttgtgaatttgagaattagggtt 147  Q
    |||||||||| ||||||||||| |||| |||||||| ||  ||||||| ||| ||||  ||||||||||  ||  || |||||||| |||||||||||    
T  22583659 ctaaggtaagggtgggattaacattctttaattctaggttgtataattctgaaattgaatttaacatgtagttgtttatgaatttgggaattagggtt 22583756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 5761586 - 5761518
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  5761586 ctaaggtaagggtgggactaactttctctaattctaagt-gtataattttgaaattgagtttagcatgtt 5761518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 6101752 - 6101821
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||  |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  6101752 ctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaattgtgtttagcatgtt 6101821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 4380616 - 4380680
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaac 116  Q
    |||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |  |||||||||    
T  4380616 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaaagggtttaac 4380680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 20083638 - 20083706
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| ||| || |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  20083638 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 20083706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 42817907 - 42817975
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| | || ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  42817907 taaggtaagggtgggacttactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 42817975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 10774627 - 10774701
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagt 90  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  10774627 agaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaaccttcactaattctaagt 10774701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 17011817 - 17011742
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    |||||||||| |||||| ||||| |||||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  17011817 agaaccaagaaggagagagaccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagta 17011742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 31457049 - 31456975
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagt 90  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| ||| || |||| |||||||||| |||||    
T  31457049 agaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgagactaactttctctaattttaagt 31456975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 21554266 - 21554341
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||| |||||| ||||||||  ||||||| ||||    
T  21554266 agaaccaagagggagagagaccgctgatcatcaatactaaggtaagggtgggactaaccttcagtaattctgagta 21554341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 99
Target Start/End: Complemental strand, 29448929 - 29448846
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagtaatataatt 99  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||   || || |||| ||||||||||||||||||| |||||    
T  29448929 agaaccaagagggagagagaccaccgatcatcaatactaaggtaatgatgagactaactttctctaattctaagtaatttaatt 29448846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Original strand, 21556912 - 21556982
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattct 86  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| ||| || ||||||||  |||||||    
T  21556912 agaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgagactaaccttcagtaattct 21556982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 30616703 - 30616629
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagt 90  Q
    ||||||||||||||||| ||||| |||||||||||| || |||||| |||||| | || ||||||||||||||||    
T  30616703 agaaccaagagggagagagaccgccgatcatcaatattatggtaagggtgggactgactttctctaattctaagt 30616629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 26832710 - 26832635
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| |||||  || ||||||||||| |||||| |||||| ||||||||  ||||||||||||    
T  26832710 agaaccaagagggagagagaccgctgaccatcaatactacggtaagggtgggagtaaccttcaataattctaagta 26832635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 22240882 - 22240924
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggt 58  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  22240882 agaaccaagagggagagagaccgtcgatcatcaatactaaggt 22240924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 22241878 - 22241920
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggt 58  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  22241878 agaaccaagagggagagagaccgtcgatcatcaatactaaggt 22241920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 22242874 - 22242916
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggt 58  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  22242874 agaaccaagagggagagagaccgtcgatcatcaatactaaggt 22242916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 22243870 - 22243912
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggt 58  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  22243870 agaaccaagagggagagagaccgtcgatcatcaatactaaggt 22243912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 10954142 - 10954073
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| |||||| ||||||||  |||||||||||  | ||||||||| ||||| |||||||||||    
T  10954142 ctaaggtaagggtgggactaaccttccttaattctaagttgtgtaattatgaaattggatttaacatgtt 10954073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 31622170 - 31622047
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt-ttg-ttgtgaatttgagaattagggttga 149  Q
    |||||||||| ||||||||||| |||||||||| || ||  ||||||| ||| |||| ||||| |||||| ||| |||| |||||| |||||||| ||      
T  31622170 ctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgtaaatttgggaattaggttttg 31622071  T
Q  150 gaattgtaataggttgttaataga 173  Q
     | | ||||| |||||||||||||    
T  31622070 aagtcgtaattggttgttaataga 31622047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 266090 - 266044
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataatt 99  Q
    ||||||||| |||||| |||| ||||||||||||||||||| |||||    
T  266090 taaggtaagggtgggactaactttctctaattctaagtaatttaatt 266044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 20469175 - 20469220
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataa 97  Q
    |||||||||| |||||| |||| |||||||||||||||| ||||||    
T  20469175 ctaaggtaagggtgggactaactttctctaattctaagtgatataa 20469220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 21617927 - 21617972
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataa 97  Q
    |||||||||| |||||| |||| |||||||||||||||| ||||||    
T  21617927 ctaaggtaagggtgggactaactttctctaattctaagtgatataa 21617972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 4e-22; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 27329944 - 27330049
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaa 115  Q
    |||||| |||||||||| ||||| |||||||||||||||||||||| ||| || |||| ||||||||||||| ||  ||||||| ||| |||| ||||||    
T  27329944 agaacccagagggagagagaccgccgatcatcaatactaaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaa 27330043  T
Q  116 catgtt 121  Q
    ||||||    
T  27330044 catgtt 27330049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 27390684 - 27390789
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaa 115  Q
    |||||| |||||||||| ||||| |||||||||||||||||||||| ||| || |||| ||||||||||||| ||  ||||||| ||| |||| ||||||    
T  27390684 agaacccagagggagagagaccgccgatcatcaatactaaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaa 27390783  T
Q  116 catgtt 121  Q
    ||||||    
T  27390784 catgtt 27390789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 15173416 - 15173491
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||  |||||| |||| |||||||||||||||||    
T  15173416 agaaccaagagggagagagaccgccgatcatcaatactaaggtaatggtgggactaactttctctaattctaagta 15173491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 28103410 - 28103486
Alignment:
Q  15 aagaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| |||||| ||| ||||  ||||||| ||||    
T  28103410 aagaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaatcttcaataattctgagta 28103486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 15900617 - 15900692
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||||| ||| ||  ||| |||||||||||||||||    
T  15900617 agaaccaagagggagagagaccgccgatcttcaatactaaggtaagggtgagaccaactttctctaattctaagta 15900692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 27852295 - 27852220
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||| |||||| ||||||||  | ||||||||||    
T  27852295 agaaccaagagggagagagaccgctgatcatcaatactaaggtaagggtgggactaaccttcaatcattctaagta 27852220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 20733431 - 20733497
Alignment:
Q  197 atacagtagattgatcaataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    ||||||||| ||||| ||||||| ||||| |||||||||| |||||||||| |||||||||||||||    
T  20733431 atacagtaggttgatgaataattagtgttataatgataaggtaatcataggataatgattagggtca 20733497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 27852071 - 27852005
Alignment:
Q  197 atacagtagattgatcaataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    ||||||||| ||||| ||||||| ||||| |||||||| | | ||||||||||||||||||||||||    
T  27852071 atacagtaggttgatgaataattagtgttataatgatagggtgatcatagggtaatgattagggtca 27852005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 15890711 - 15890780
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||||||||||    
T  15890711 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgtt 15890780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 20733207 - 20733268
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttc 77  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||| ||| || ||||||||    
T  20733207 agaaccaagagggagagagaccgctgatcatcaatactaaggtaagggtgagactaaccttc 20733268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 18703620 - 18703559
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggttta 114  Q
    |||||||||||||||| |||| ||||||||||||||||  ||||||| ||| |||| |||||    
T  18703620 taaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagttta 18703559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 18709555 - 18709494
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggttta 114  Q
    |||||||||||||||| |||| ||||||||||||||||  ||||||| ||| |||| |||||    
T  18709555 taaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagttta 18709494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 7828024 - 7827956
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  7828024 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 7827956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 19655231 - 19655299
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| ||| || |||| ||||||||||||||||  ||||||| ||| |||| ||||||||||||    
T  19655231 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttaacatgtt 19655299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 23150287 - 23150355
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  23150287 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 23150355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 24267900 - 24267833
Alignment:
Q  54 aaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  24267900 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 24267833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 12041619 - 12041688
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatg-agattgggtttaacatgt 120  Q
    |||||||||| |||||| ||||||||| |||||||||||  ||||||| || | ||||| ||||||||||    
T  12041619 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaaattggatttaacatgt 12041688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 6457 - 6382
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||| |||||| |||| |||||||||||||||||    
T  6457 agaaccaagagggagagagaccgccgatcatcaatactaatgtaagggtgggactaactttctctaattctaagta 6382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 7e-21; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 29052145 - 29052220
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||| |||||||||||  ||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  29052145 agaactaagagggagagaaaccgtcgatcatcaatactaaggtaagggtgggactaactttctctaattctaagta 29052220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 16549968 - 16550043
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||||  ||||| |||| |||||||||||||||||    
T  16549968 agaaccaagagggagagagactgccgatcatcaatactaaggtaaggttgggactaactttctctaattctaagta 16550043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 16615694 - 16615619
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||||  ||||| |||| |||||||||||||||||    
T  16615694 agaaccaagagggagagagactgccgatcatcaatactaaggtaaggttgggactaactttctctaattctaagta 16615619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 30820114 - 30820189
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| || |||||| ||||||||  ||||||| ||||    
T  30820114 agaaccaagagggagagagaccgccgatcatcaatactaaggtgagggtgggactaaccttcagtaattctgagta 30820189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 19485936 - 19485993
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaac 73  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| |||||| ||||    
T  19485936 agaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaac 19485993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 36685109 - 36685184
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||| |||| |  |||||||  ||||||| ||||    
T  36685109 agaaccaagagggagagagaccgttgatcatcaatactaaggtaagggtggaaccaaccttcaataattctgagta 36685184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 11091512 - 11091446
Alignment:
Q  197 atacagtagattgatcaataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    ||||| ||| ||||| ||||||| ||||| |||||||| | ||||||||||||||||||||||||||    
T  11091512 atacattaggttgatgaataattagtgttataatgatagggtaatcatagggtaatgattagggtca 11091446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 12127162 - 12127231
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||||||||||    
T  12127162 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgtt 12127231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 13147459 - 13147540
Alignment:
Q  40 cgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||| | | ||||||||| |||||| |||| |||||||||||||||| |||||||| ||| |||| ||||| ||||||    
T  13147459 cgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttatataattctgaaattgagtttagcatgtt 13147540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 46579722 - 46579783
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttc 77  Q
    |||||||| |||||||| ||||| |||||||||||||||||||||| ||||||  |||||||    
T  46579722 agaaccaatagggagagagaccgccgatcatcaatactaaggtaagggtgggaacaaccttc 46579783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 20620338 - 20620270
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||||||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  20620338 taaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 20620270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 20586405 - 20586336
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  20586405 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaccatgtt 20586336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 24269946 - 24270015
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| ||||||||||| |||||||||| |||||  ||||||| ||| |||| ||||| ||||||    
T  24269946 ctaaggtaagggtgggattaactttctctaattttaagttgtataattctgaaattgagtttagcatgtt 24270015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 8851159 - 8851227
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  8851159 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 8851227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 12372326 - 12372258
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  12372326 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 12372258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 12465260 - 12465328
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  12465260 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 12465328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 99
Target Start/End: Original strand, 35771440 - 35771487
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataatt 99  Q
    |||||||||| |||||| |||| |||||||||||||||| ||||||||    
T  35771440 ctaaggtaagggtgggactaactttctctaattctaagtgatataatt 35771487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 10658850 - 10658916
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacat 118  Q
    |||||||||| |||||| ||||||||| |||||||||||  ||| ||| ||| ||||| ||||||||    
T  10658850 ctaaggtaagggtgggactaaccttctttaattctaagttgtatgattctgaaattggatttaacat 10658916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 16078382 - 16078332
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatga 103  Q
    ||||||||| |||||| |||| ||||||||||||||||  |||||||||||    
T  16078382 taaggtaagggtgggactaactttctctaattctaagtggtataattatga 16078332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 18074647 - 18074693
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataatt 99  Q
    ||||||||| ||||||||||| ||||||||||||||||  |||||||    
T  18074647 taaggtaagagtgggattaactttctctaattctaagtggtataatt 18074693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 4071873 - 4071828
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataa 97  Q
    |||||||||| |||||| |||| |||||||||||||||| ||||||    
T  4071873 ctaaggtaagggtgggactaactttctctaattctaagtgatataa 4071828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 12754611 - 12754676
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaaca 117  Q
    |||||||||| |||||| |||| |||||||||||||||| |||| ||| ||| | ||| |||||||    
T  12754611 ctaaggtaagggtgggactaactttctctaattctaagttatatgattctgaaactggatttaaca 12754676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 11067520 - 11067452
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| ||| || |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  11067520 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 11067452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 12322930 - 12322998
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||| | |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  12322930 taaggtaagggtggaactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 12322998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 32433589 - 32433657
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| ||| || |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  32433589 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 32433657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 46579918 - 46579974
Alignment:
Q  207 ttgatcaataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    ||||| ||||||| ||||| |||||||| | | ||||||||||||| ||||||||||    
T  46579918 ttgatgaataattagtgttataatgatagggtgatcatagggtaattattagggtca 46579974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 9047 - 8974
Alignment:
Q  18 aaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||| ||||  |||||||||||||||||||||| |||||| |||| |||||||||||||||||    
T  9047 aaccaagagggagagtgaccaccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagta 8974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 21740 - 21815
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| ||||  ||||||||||||||||||||||  ||||| |||| |||||||||||||||||    
T  21740 agaaccaagagggagagagaccaccgatcatcaatactaaggtaaggatgggactaactttctctaattctaagta 21815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 5455 - 5381
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagt 90  Q
    ||||||||||||||||| ||||| ||||||| ||| |||||||||| |||||| |||||||| ||||||||||||    
T  5455 agaaccaagagggagagagaccgccgatcattaattctaaggtaagggtgggactaaccttcactaattctaagt 5381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 15046 - 14972
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagt 90  Q
    ||||||||||||||||| ||||||||||||||||||||||||| || |||||| ||| ||| | |||||||||||    
T  15046 agaaccaagagggagagagaccgtcgatcatcaatactaaggtgagggtgggactaaacttatataattctaagt 14972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 17066 - 16992
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagt 90  Q
    ||||||||||||||||| ||||||||||||||||||||||||| || |||||| ||| ||| | |||||||||||    
T  17066 agaaccaagagggagagagaccgtcgatcatcaatactaaggtgagggtgggactaaacttatataattctaagt 16992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 15361 - 15287
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagt 90  Q
    ||||||||||||||||| || || ||||||||| |||||||||||| |||||| |||| ||||||||||||||||    
T  15361 agaaccaagagggagagagatcgccgatcatcattactaaggtaagggtgggactaactttctctaattctaagt 15287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 1254 - 1147
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaa 115  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||| ||| || |||| ||  ||||||||||||  ||||||| ||| ||||  ||||     
T  1254 agaaccaagagggagagagaccgccgattatcaatactaaggtaagggtgtgactaacttttcctaattctaagttgtataattctgaaattgaatttag 1155  T
Q  116 catgtttt 123  Q
    ||||||||    
T  1154 catgtttt 1147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 9148 - 9073
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    |||||||| |||||||| ||||| |||||||||||||||||||||| |||||| ||||||||  ||||||| ||||    
T  9148 agaaccaatagggagagagaccgccgatcatcaatactaaggtaagggtgggactaaccttcagtaattctgagta 9073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 11312 - 11237
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| ||| |  |||| ||||||||||| |||||    
T  11312 agaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgagtctaactttctctaattccaagta 11237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 2026 - 1951
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    ||||||||||||||||| ||||  |||||||||||||||||| ||| |||||| |||| || ||||||||||||||    
T  2026 agaaccaagagggagagagaccaccgatcatcaatactaaggaaagggtgggactaactttatctaattctaagta 1951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 1803 - 1737
Alignment:
Q  197 atacagtagattgatcaataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    ||||||||| ||||| ||||||| ||||| |||||||| ||| ||||||||||||||||||||||||    
T  1803 atacagtaggttgatgaataattagtgttataatgataggttgatcatagggtaatgattagggtca 1737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 16693 - 16589
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaa 115  Q
    ||||||||||||||||| ||||| |||||||||||||||||  ||| |||||| |||  || |||||||||||||  ||| ||| ||| | ||| |||||    
T  16693 agaaccaagagggagagagaccgacgatcatcaatactaagcaaagggtgggactaaatttatctaattctaagttgtatgattctgaaactggatttaa 16594  T
Q  116 catgt 120  Q
    |||||    
T  16593 catgt 16589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 1304 - 1238
Alignment:
Q  197 atacagtagattgatcaataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    ||||||||| ||||| ||||||| ||||| |||||||| | | ||||||||||||||||||||||||    
T  1304 atacagtaggttgatgaataattagtgttataatgatagggttatcatagggtaatgattagggtca 1238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 1527 - 1471
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaa 72  Q
    |||||||| |||||||  | ||| |||||||||||||||||||||| ||||||||||    
T  1527 agaaccaaaagggagacaggccgccgatcatcaatactaaggtaagggtgggattaa 1471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 13502 - 13436
Alignment:
Q  197 atacagtagattgatcaataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    ||||||||| ||||| ||||||| ||||| |||||||| | | ||||||||||||||||||||||||    
T  13502 atacagtaggttgatgaataattagtgttataatgatagggtgatcatagggtaatgattagggtca 13436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 13726 - 13651
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagta 91  Q
    |||||||| |||||||| |||||  || ||||||||||| |||||| |||||| ||||||||  ||||||||||||    
T  13726 agaaccaacagggagagagaccgctgaccatcaatactacggtaagggtgggagtaaccttcaataattctaagta 13651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 4)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 5165 - 5099
Alignment:
Q  197 atacagtagattgatcaataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    ||||||||| ||||| ||||||| ||||| |||||||| | | ||||||||||||||||||||||||    
T  5165 atacagtaggttgatgaataattagtgttataatgatagggtgatcatagggtaatgattagggtca 5099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 12185 - 12119
Alignment:
Q  197 atacagtagattgatcaataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    ||||||||| ||||| ||||||| ||||| |||||||| | | ||||||||||||||||||||||||    
T  12185 atacagtaggttgatgaataattagtgttataatgatagggtgatcatagggtaatgattagggtca 12119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 5374 - 5325
Alignment:
Q  28 gagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttc 77  Q
    ||||| ||||| |||||||||||||||||||||| |||||| ||||||||    
T  5374 gagagagaccgccgatcatcaatactaaggtaagggtgggactaaccttc 5325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 12394 - 12345
Alignment:
Q  28 gagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttc 77  Q
    ||||| ||||| |||||||||||||||||||||| |||||| ||||||||    
T  12394 gagagagaccgccgatcatcaatactaaggtaagggtgggactaaccttc 12345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 191 - 122
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||||||||||    
T  191 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgtt 122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 4993 - 4923
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgaga-ttgggtttaacatgtt 121  Q
    |||||||||| |||||| ||||||||| |||||||||||  ||||||| ||||| |||| |||||||||||    
T  4993 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagagttggatttaacatgtt 4923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 144
Target Start/End: Complemental strand, 2942 - 2848
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt-ttg-ttgtgaatttgagaattagg 144  Q
    |||||||||| ||||||||||| |||||||||| || ||  ||||||| ||| |||| ||||| |||||| ||| ||||||||||| ||||||||    
T  2942 ctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaattagg 2848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 68162 - 68096
Alignment:
Q  197 atacagtagattgatcaataattggtgttctaatgataagttaatcatagggtaatgattagggtca 263  Q
    ||||||||| ||||| ||||||| ||||| |||||||| | | ||||||||||||| ||||||||||    
T  68162 atacagtaggttgatgaataattagtgttataatgatagggtgatcatagggtaataattagggtca 68096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 695 - 764
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||| | |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||||||||||    
T  695 ctaaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgtt 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 6003 - 5934
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| |||||| ||||||||| |||||||||||  ||||||| ||| ||||  |||||||||||    
T  6003 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattgaatttaacatgtt 5934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 1257 - 1189
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  1257 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 1189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 468 - 536
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  468 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 78185 - 78253
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  78185 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 78253  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 24131 - 24199
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  24131 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 24199  T

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Target: scaffold0802 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 99
Target Start/End: Original strand, 4708 - 4755
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataatt 99  Q
    |||||||||| |||||| |||| ||||||||||||||||| |||||||    
T  4708 ctaaggtaagggtgggactaactttctctaattctaagtagtataatt 4755  T

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Target: scaffold0139 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 23623 - 23556
Alignment:
Q  16 agaaccaagagggagagggaccgtcgatcatcaatactaaggtaagtgtgggattaaccttctctaat 83  Q
    |||||||||||||| || ||| | |||||||||||||||||||||| || ||| || | |||||||||    
T  23623 agaaccaagagggaaagagactgccgatcatcaatactaaggtaagggtaggactagctttctctaat 23556  T

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Target: scaffold0111 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 12534 - 12601
Alignment:
Q  54 aaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  12534 aaggtaagggtgggaataactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 12601  T

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Target: scaffold0113 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 35555 - 35474
Alignment:
Q  39 tcgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||| |||||| |||||||||| ||| || |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  35555 tcgatgatcaat-ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 35474  T

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Target: scaffold0037 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 117805 - 117851
Alignment:
Q  51 actaaggtaagtgtgggattaaccttctctaattctaagtaatataa 97  Q
    ||||||||||| |||||| |||| |||||||||||||||| ||||||    
T  117805 actaaggtaagggtgggactaactttctctaattctaagtgatataa 117851  T

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Target: scaffold0956 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 2604 - 2539
Alignment:
Q  56 ggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||| |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  2604 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 2539  T

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Target: scaffold0379 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 10846 - 10757
Alignment:
Q  57 gtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt-ttg-ttgtgaatttgagaattagg 144  Q
    ||||| ||||||||||| |||||||||| || ||  ||||||| ||| |||| ||||| |||||| ||| ||||||||||| ||||||||    
T  10846 gtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgtgaatttgggaattagg 10757  T

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Target: scaffold0207 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 13391 - 13460
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| |||||| |||| ||||||||||| ||||  ||||||| ||| |||| ||||| ||||||    
T  13391 ctaaggtaagggtgggactaactttctctaattccaagttgtataattctgaaattgagtttagcatgtt 13460  T

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Target: scaffold0064 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 58811 - 58730
Alignment:
Q  40 cgatcatcaatactaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||| | | ||||||||| |||||| |||| ||||||||||||||||  || |||| ||| |||| ||||| ||||||    
T  58811 cgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttgtacaattctgaaattgagtttagcatgtt 58730  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 168998 - 169067
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||| | |||||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  168998 ctaaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 169067  T

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Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 143663 - 143595
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| ||| || |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  143663 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 143595  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.00000009; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 77740 - 77671
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    |||||||||| ||| || |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  77740 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 77671  T

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Target: scaffold0001; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 32046 - 31978
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| ||| || |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  32046 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 31978  T

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Target: scaffold0001; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 37353 - 37285
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| ||| || |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  37353 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 37285  T

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Target: scaffold0737 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 4714 - 4782
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| || ||| |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  4714 taaggtaagggtcggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 4782  T

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Target: scaffold0149 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 29572 - 29640
Alignment:
Q  52 ctaaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgt 120  Q
    |||||||||| |||||| |||| |||| |||||||||||  ||||||| ||| |||| ||||| |||||    
T  29572 ctaaggtaagggtgggactaactttctataattctaagttgtataattctgaaattgagtttagcatgt 29640  T

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Target: scaffold0047 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 79101 - 79033
Alignment:
Q  53 taaggtaagtgtgggattaaccttctctaattctaagtaatataattatgagattgggtttaacatgtt 121  Q
    ||||||||| ||| || |||| ||||||||||||||||  ||||||| ||| |||| ||||| ||||||    
T  79101 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt 79033  T

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