View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17824_high_14 (Length: 283)
Name: NF17824_high_14
Description: NF17824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17824_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 51582279 - 51582508
Alignment:
| Q |
18 |
catttgacaacaatcaccagattcttaagacattttgttgtaatgtgatttgcaataatgagatttagtctacaatcatactgcaagcaccaatcaaagc |
117 |
Q |
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| T |
51582279 |
catttgacaacaatcaccagattctcaagacattttgttgtaatgtgatttgcaataatgagatttagtctacaatcatactgcaagcaccaatcaaagc |
51582378 |
T |
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| Q |
118 |
agcacttgaaagatcacataattttcgcaaaacatctattatcacaaacaaaacaccagcgtacaacgactattggtcctgtcgagtgaaatccacatgc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |
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| T |
51582379 |
agcacttgaaagatcacataattttcgcaaaacatctattatcacaaacaaaacaccagcgtacaaagaatattggtcctgtcgagtgaaatccacatgc |
51582478 |
T |
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| Q |
218 |
accacgaatcgaagatagaaacaaaacacc |
247 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
51582479 |
accacgaatcgaagatagaaacaaaacacc |
51582508 |
T |
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