View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17824_low_12 (Length: 310)

Name: NF17824_low_12
Description: NF17824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17824_low_12
NF17824_low_12
[»] chr4 (13 HSPs)
chr4 (13-297)||(33613502-33613797)
chr4 (48-133)||(10219449-10219538)
chr4 (91-133)||(40815470-40815514)
chr4 (13-49)||(3381092-3381128)
chr4 (13-49)||(11599723-11599759)
chr4 (13-49)||(15080681-15080717)
chr4 (13-49)||(19736649-19736685)
chr4 (13-49)||(20555300-20555336)
chr4 (13-49)||(20561944-20561980)
chr4 (13-49)||(22140040-22140076)
chr4 (13-49)||(22151954-22151990)
chr4 (13-49)||(49891819-49891855)
chr4 (13-49)||(55790962-55790998)
[»] chr6 (19 HSPs)
chr6 (53-133)||(33253796-33253878)
chr6 (53-133)||(22403049-22403131)
chr6 (53-133)||(34270966-34271048)
chr6 (53-133)||(18869650-18869734)
chr6 (13-49)||(26844625-26844661)
chr6 (13-49)||(2408638-2408674)
chr6 (13-49)||(18229219-18229255)
chr6 (13-49)||(18869559-18869595)
chr6 (13-49)||(19715044-19715080)
chr6 (13-49)||(20073363-20073399)
chr6 (13-49)||(21748275-21748311)
chr6 (13-49)||(22402958-22402994)
chr6 (13-49)||(22597830-22597866)
chr6 (13-49)||(22763507-22763543)
chr6 (13-49)||(27643789-27643825)
chr6 (13-49)||(28701538-28701574)
chr6 (13-49)||(33253705-33253741)
chr6 (13-49)||(34270875-34270911)
chr6 (13-49)||(35025807-35025843)
[»] chr8 (17 HSPs)
chr8 (48-133)||(6665206-6665293)
chr8 (48-133)||(6672870-6672957)
chr8 (53-133)||(22105704-22105786)
chr8 (13-49)||(32008102-32008138)
chr8 (53-129)||(12846721-12846799)
chr8 (19-49)||(32001151-32001181)
chr8 (13-49)||(6665120-6665156)
chr8 (13-49)||(6672784-6672820)
chr8 (13-49)||(12846630-12846666)
chr8 (13-49)||(14890036-14890072)
chr8 (13-49)||(16738691-16738727)
chr8 (13-49)||(20735127-20735163)
chr8 (13-49)||(20743685-20743721)
chr8 (13-49)||(22155633-22155669)
chr8 (13-49)||(25644809-25644845)
chr8 (13-49)||(25706803-25706839)
chr8 (13-49)||(25857914-25857950)
[»] chr3 (25 HSPs)
chr3 (48-133)||(6956596-6956683)
chr3 (48-133)||(6970876-6970963)
chr3 (53-133)||(14737937-14738019)
chr3 (91-133)||(27874262-27874306)
chr3 (53-133)||(16469208-16469289)
chr3 (13-49)||(69537-69573)
chr3 (13-49)||(75630-75666)
chr3 (13-49)||(262720-262756)
chr3 (13-49)||(3676903-3676939)
chr3 (13-49)||(3686038-3686074)
chr3 (13-49)||(6956733-6956769)
chr3 (13-49)||(12702915-12702951)
chr3 (13-49)||(12997837-12997873)
chr3 (13-49)||(13104285-13104321)
chr3 (13-49)||(13110441-13110477)
chr3 (13-49)||(14738074-14738110)
chr3 (13-49)||(14879883-14879919)
chr3 (13-49)||(14886471-14886507)
chr3 (13-49)||(16469344-16469380)
chr3 (13-49)||(20435906-20435942)
chr3 (13-49)||(20449832-20449868)
chr3 (13-49)||(21637225-21637261)
chr3 (13-49)||(27874132-27874168)
chr3 (13-49)||(41433072-41433108)
chr3 (13-49)||(41441569-41441605)
[»] scaffold0014 (3 HSPs)
scaffold0014 (48-133)||(186568-186655)
scaffold0014 (13-49)||(170201-170237)
scaffold0014 (13-49)||(186705-186741)
[»] chr7 (23 HSPs)
chr7 (53-133)||(791799-791881)
chr7 (53-133)||(805634-805716)
chr7 (53-133)||(17465213-17465295)
chr7 (53-133)||(17587919-17588001)
chr7 (53-133)||(37288110-37288192)
chr7 (91-133)||(7341804-7341848)
chr7 (13-49)||(12585759-12585795)
chr7 (13-49)||(791936-791972)
chr7 (13-49)||(4831041-4831077)
chr7 (13-49)||(7341942-7341978)
chr7 (13-49)||(12595533-12595569)
chr7 (13-49)||(12606041-12606077)
chr7 (13-49)||(16263757-16263793)
chr7 (13-49)||(16271423-16271459)
chr7 (13-49)||(16280450-16280486)
chr7 (13-49)||(16294652-16294688)
chr7 (13-49)||(17465122-17465158)
chr7 (13-49)||(17588056-17588092)
chr7 (13-49)||(18777695-18777731)
chr7 (13-49)||(26125579-26125615)
chr7 (13-49)||(37288019-37288055)
chr7 (13-49)||(43907594-43907630)
chr7 (13-49)||(44417887-44417923)
[»] chr5 (17 HSPs)
chr5 (91-133)||(21746425-21746469)
chr5 (53-133)||(24060391-24060472)
chr5 (91-133)||(34461582-34461626)
chr5 (91-133)||(34475839-34475883)
chr5 (13-49)||(20638498-20638534)
chr5 (13-49)||(21746564-21746600)
chr5 (13-49)||(24060527-24060563)
chr5 (13-49)||(29894493-29894529)
chr5 (13-49)||(29903215-29903251)
chr5 (13-49)||(30250600-30250636)
chr5 (13-49)||(34461452-34461488)
chr5 (13-49)||(34475709-34475745)
chr5 (13-49)||(36449631-36449667)
chr5 (13-49)||(36456019-36456055)
chr5 (13-49)||(37578028-37578064)
chr5 (13-49)||(37587138-37587174)
chr5 (13-49)||(38226603-38226639)
[»] scaffold0016 (1 HSPs)
scaffold0016 (91-133)||(56414-56458)
[»] chr2 (15 HSPs)
chr2 (91-133)||(21749010-21749054)
chr2 (91-133)||(21753587-21753631)
chr2 (91-133)||(21767738-21767782)
chr2 (13-49)||(5869798-5869834)
chr2 (13-49)||(5872909-5872945)
chr2 (13-49)||(18501602-18501638)
chr2 (13-49)||(20273657-20273693)
chr2 (13-49)||(21767875-21767911)
chr2 (105-133)||(24868121-24868149)
chr2 (13-49)||(24868265-24868301)
chr2 (13-49)||(27342099-27342135)
chr2 (13-49)||(27343209-27343245)
chr2 (13-49)||(29586553-29586589)
chr2 (13-49)||(35082280-35082316)
chr2 (13-49)||(40389322-40389358)
[»] chr1 (11 HSPs)
chr1 (91-133)||(27167602-27167646)
chr1 (13-49)||(2334011-2334047)
chr1 (13-49)||(2686859-2686895)
chr1 (13-49)||(9009788-9009824)
chr1 (13-49)||(18099687-18099723)
chr1 (13-49)||(18702871-18702907)
chr1 (13-49)||(20430742-20430778)
chr1 (13-49)||(35077128-35077164)
chr1 (13-49)||(44319655-44319691)
chr1 (13-49)||(44831201-44831237)
chr1 (13-49)||(49934463-49934499)
[»] scaffold1699 (1 HSPs)
scaffold1699 (13-49)||(18-54)
[»] scaffold0799 (1 HSPs)
scaffold0799 (13-49)||(4545-4581)
[»] scaffold0582 (1 HSPs)
scaffold0582 (13-49)||(5984-6020)
[»] scaffold0560 (1 HSPs)
scaffold0560 (13-49)||(10711-10747)
[»] scaffold0478 (1 HSPs)
scaffold0478 (13-49)||(1171-1207)
[»] scaffold0393 (1 HSPs)
scaffold0393 (13-49)||(2869-2905)
[»] scaffold0361 (1 HSPs)
scaffold0361 (13-49)||(2415-2451)
[»] scaffold0119 (1 HSPs)
scaffold0119 (13-49)||(38850-38886)
[»] scaffold0098 (1 HSPs)
scaffold0098 (13-49)||(28894-28930)
[»] scaffold0083 (1 HSPs)
scaffold0083 (13-49)||(25116-25152)
[»] scaffold0077 (1 HSPs)
scaffold0077 (13-49)||(1685-1721)
[»] scaffold0051 (1 HSPs)
scaffold0051 (13-49)||(56813-56849)
[»] scaffold0043 (1 HSPs)
scaffold0043 (13-49)||(31959-31995)
[»] scaffold0029 (1 HSPs)
scaffold0029 (13-49)||(36172-36208)
[»] scaffold0027 (1 HSPs)
scaffold0027 (13-49)||(24951-24987)


Alignment Details
Target: chr4 (Bit Score: 166; Significance: 7e-89; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 13 - 297
Target Start/End: Complemental strand, 33613797 - 33613502
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattttttaaaatgggttgtttgaaactttttcccctttnnnnnnnt---ttgttcagt--tgagata 107  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||            |||||||||  ||| |||    
T  33613797 aaaatcaagaggttctcatagagtattacgaatatttttcaaaatgggttgtttggaactttttccccttaaaaaaaaaaaattgttcagtcgtgaaata 33613698  T
Q  108 aaaa-gtgagtcaaacgctaatcaaataacg-----ctccaaaaaatgacgcgataatattcaaggaataaaatgactattatcccaaccaaaatccttg 201  Q
    |||| ||||||||||||||||||||||  |      |||| |||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  33613697 aaaaagtgagtcaaacgctaatcaaatggcattgacctccgaaaaataacgcgacaatattcaaggaataaaatgactattatctcaaccaaaatccttg 33613598  T
Q  202 caatatctttgtgtataagtagtcttgactcttgatgcatttcttgcatcgtccctgtcctatttgggaatcgcaggtcgcattatggacgatttt 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33613597 caatatctttgtgtataagtagtcttgactcttgatgcatttcttgcatcgtccctgtcctatttgggaatcgcaggtcgcattatggacgatttt 33613502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 10219538 - 10219449
Alignment:
Q  48 tttttaaaatgggttgtttgaaactttttcccctttnnnnnnnttt--gttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    |||| ||||||||| |||||||||||||||||||||       |||  |||||||  ||||||||||||||||||||| |||||||||||    
T  10219538 ttttcaaaatgggtggtttgaaactttttcccctttaaaaaattttttgttcagtcgtgagataaaaagtgagtcaaaagctaatcaaat 10219449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 40815514 - 40815470
Alignment:
Q  91 tttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||    
T  40815514 tttgttcagtcgtgagataaaaactgagtcaaacgctaatcaaat 40815470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 3381128 - 3381092
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  3381128 aaaatcaagaggttctcgtagagtactacgaatattt 3381092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 11599759 - 11599723
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  11599759 aaaatcaagaggttctcgtagagtactacgaatattt 11599723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 15080717 - 15080681
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  15080717 aaaatcaagaggttctcgtagagtactacgaatattt 15080681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 19736685 - 19736649
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  19736685 aaaatcaagaggttctcgtagagtactacgaatattt 19736649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 20555300 - 20555336
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  20555300 aaaatcaagaggttctcgtagagtactacgaatattt 20555336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 20561944 - 20561980
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  20561944 aaaatcaagaggttctcgtagagtactacgaatattt 20561980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 22140076 - 22140040
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  22140076 aaaatcaagaggttctcgtagagtactacgaatattt 22140040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 22151990 - 22151954
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  22151990 aaaatcaagaggttctcgtagagtactacgaatattt 22151954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 49891819 - 49891855
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  49891819 aaaatcaagaggttctcgtagagtactacgaatattt 49891855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 55790962 - 55790998
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  55790962 aaaatcaagaggttctcgtagagtactacgaatattt 55790998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 33253796 - 33253878
Alignment:
Q  53 aaaatgggttgtttgaaactttttcccctttnnnnnnntttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    |||||||||||||||||||||||||||||||       ||||||||||  |||||||||||||||||||||||||||||||||    
T  33253796 aaaatgggttgtttgaaactttttcccctttaaaaaaatttgttcagtcgtgagataaaaagtgagtcaaacgctaatcaaat 33253878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 22403049 - 22403131
Alignment:
Q  53 aaaatgggttgtttgaaactttttcccctttnnnnnnntttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||||||||| ||||||||||||||        ||||||||||  ||||||||||| |||||||||||||||||||||    
T  22403049 aaaatgggttgtttggaactttttccccttaaaaaaaatttgttcagtcgtgagataaaaactgagtcaaacgctaatcaaat 22403131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 34270966 - 34271048
Alignment:
Q  53 aaaatgggttgtttgaaactttttcccctttnnnnnnntttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||||||||| ||||||||||||||        ||||||||||  ||||||||||||||||||||| |||||||||||    
T  34270966 aaaatgggttgtttggaactttttccccttaaaaaaaatttgttcagtcgtgagataaaaagtgagtcaaaagctaatcaaat 34271048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 18869650 - 18869734
Alignment:
Q  53 aaaatgggttgtttgaaactttttcccctttnnnnnnn--tttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||||||||| |||||||||||||||         ||||||||||  |||||||||||||||||||||||| ||||||||    
T  18869650 aaaatgggttgtttggaactttttcccctttaaaaaaaaatttgttcagtcgtgagataaaaagtgagtcaaacgccaatcaaat 18869734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 26844661 - 26844625
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| |||||||||||||||||||||||||||||||    
T  26844661 aaaatcaagaggttctcgtagagtattacgaatattt 26844625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 2408674 - 2408638
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  2408674 aaaatcaagaggttctcgtagagtactacgaatattt 2408638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 18229219 - 18229255
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  18229219 aaaataaagaggttctcgtagagtactacgaatattt 18229255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 18869559 - 18869595
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  18869559 aaaatcaagaggttctcgtagagtactacgaatattt 18869595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 19715044 - 19715080
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  19715044 aaaatcaagaggttctcgtagagtactacgaatattt 19715080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 20073399 - 20073363
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  20073399 aaaatcaagaggttctcgtagagtactacgaatattt 20073363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 21748311 - 21748275
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  21748311 aaaataaagaggttctcgtagagtactacgaatattt 21748275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 22402958 - 22402994
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  22402958 aaaatcaagaggttctcgtagagtactacgaatattt 22402994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 22597866 - 22597830
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  22597866 aaaatcaagaggttctcgtagagtactacgaatattt 22597830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 22763543 - 22763507
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  22763543 aaaatcaagaggttctcgtagagtactacgaatattt 22763507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 27643789 - 27643825
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  27643789 aaaatcaagaggttctcgtagagtactacgaatattt 27643825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 28701574 - 28701538
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  28701574 aaaatcaagaggttctcgtagagtactacgaatattt 28701538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 33253705 - 33253741
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  33253705 aaaatcaagaggttctcgtagagtactacgaatattt 33253741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 34270875 - 34270911
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  34270875 aaaatcaagaggttctcgtagagtactacgaatattt 34270911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 35025807 - 35025843
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  35025807 aaaatcaagaggttctcgtagagtactacgaatattt 35025843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 6665206 - 6665293
Alignment:
Q  48 tttttaaaatgggttgtttgaaactttttcccctttnnnnnnntttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    |||| ||||||||| ||||| |||||||||||||||       ||||||||||  ||||||||||||||||||||| |||||||||||    
T  6665206 ttttcaaaatgggtggtttggaactttttcccctttaaaaaaatttgttcagtcgtgagataaaaagtgagtcaaaagctaatcaaat 6665293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 6672870 - 6672957
Alignment:
Q  48 tttttaaaatgggttgtttgaaactttttcccctttnnnnnnntttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    |||| ||||||||| ||||| |||||||||||||||       ||||||||||  ||||||||||||||||||||| |||||||||||    
T  6672870 ttttcaaaatgggtggtttggaactttttcccctttaaaaaaatttgttcagtcgtgagataaaaagtgagtcaaaagctaatcaaat 6672957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 22105786 - 22105704
Alignment:
Q  53 aaaatgggttgtttgaaactttttcccctttnnnnnnntttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||| ||||| ||||||||||||||        ||||||||||  |||||||||||||||||||||||| ||||||||    
T  22105786 aaaatgggtggtttggaactttttccccttaaaaaaaatttgttcagtcgtgagataaaaagtgagtcaaacgccaatcaaat 22105704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 32008102 - 32008138
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| |||||||||||||||||||||||||||||||    
T  32008102 aaaatcaagaggttctcgtagagtattacgaatattt 32008138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 12846721 - 12846799
Alignment:
Q  53 aaaatgggttgtttgaaactttttcccctttnnnnnnntttgttcagt--tgagataaaaagtgagtcaaacgctaatc 129  Q
    ||||||||| ||||| |||||||||||| |        ||||||||||  |||||||||||||||||||||||||||||    
T  12846721 aaaatgggtggtttggaactttttccccataaaaaaaatttgttcagtcgtgagataaaaagtgagtcaaacgctaatc 12846799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 49
Target Start/End: Original strand, 32001151 - 32001181
Alignment:
Q  19 aagaggttctcgtagagtattacgaatattt 49  Q
    |||||||||||||||||||||||||||||||    
T  32001151 aagaggttctcgtagagtattacgaatattt 32001181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 6665120 - 6665156
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  6665120 aaaatcaagaggttctcgtagagtactacgaatattt 6665156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 6672784 - 6672820
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  6672784 aaaatcaagaggttctcgtagagtactacgaatattt 6672820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 12846630 - 12846666
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  12846630 aaaatcaagaggttctcgtagagtactacgaatattt 12846666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 14890072 - 14890036
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  14890072 aaaatcaagaggttctcgtagagtactacgaatattt 14890036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 16738691 - 16738727
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  16738691 aaaatcaagaggttctcgtagagtactacgaatattt 16738727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 20735127 - 20735163
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  20735127 aaaatcaagaggttctcgtagagtactacgaatattt 20735163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 20743685 - 20743721
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  20743685 aaaatcaagaggttctcgtagagtactacgaatattt 20743721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 22155669 - 22155633
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  22155669 aaaatcaagaggttctcgtagagtactacgaatattt 22155633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 25644809 - 25644845
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  25644809 aaaatcaagaggttctcgtagagtactacgaatattt 25644845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 25706803 - 25706839
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  25706803 aaaatcaagaggttctcgtagagtactacgaatattt 25706839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 25857950 - 25857914
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  25857950 aaaatcaagaggttctcgtagagtactacgaatattt 25857914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 6956683 - 6956596
Alignment:
Q  48 tttttaaaatgggttgtttgaaactttttcccctttnnnnnnntttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    |||| ||||||||| ||||| |||||||||||||||       ||||||||||  ||||||||||||||||||||| |||||||||||    
T  6956683 ttttcaaaatgggtggtttggaactttttcccctttaaaaaaatttgttcagtcgtgagataaaaagtgagtcaaaagctaatcaaat 6956596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 6970963 - 6970876
Alignment:
Q  48 tttttaaaatgggttgtttgaaactttttcccctttnnnnnnntttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    |||| ||||||||| ||||| |||||||||||||||       ||||||||||  ||||||||||||||||||||| |||||||||||    
T  6970963 ttttcaaaatgggtggtttggaactttttcccctttaaaaaaatttgttcagtcgtgagataaaaagtgagtcaaaagctaatcaaat 6970876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 14738019 - 14737937
Alignment:
Q  53 aaaatgggttgtttgaaactttttcccctttnnnnnnntttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||| | ||||| ||||||||||||||        ||||||||||  |||||||||||||||||||||||||||||||||    
T  14738019 aaaatggatggtttggaactttttccccttaaaaaaaatttgttcagtcgtgagataaaaagtgagtcaaacgctaatcaaat 14737937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 27874262 - 27874306
Alignment:
Q  91 tttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||||  |||||||||||||||||||||||||||||||||    
T  27874262 tttgttcagtcgtgagataaaaagtgagtcaaacgctaatcaaat 27874306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 16469289 - 16469208
Alignment:
Q  53 aaaatgggttgtttgaaactttttcccctttnnnnnnntttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||| ||||| ||||||||||||||        ||||||||||  ||||||||||||||||||||| |||||||||||    
T  16469289 aaaatgggtggtttggaactttttcccctt-aaaaaaatttgttcagtcgtgagataaaaagtgagtcaaaagctaatcaaat 16469208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 69537 - 69573
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  69537 aaaatcaagaggttctcgtagagtactacgaatattt 69573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 75630 - 75666
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  75630 aaaatcaagaggttctcgtagagtactacgaatattt 75666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 262720 - 262756
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  262720 aaaatcaagaggttctcgtagagtactacgaatattt 262756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 3676903 - 3676939
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  3676903 aaaatcaagaggttctcgtagagtactacgaatattt 3676939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 3686038 - 3686074
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  3686038 aaaatcaagaggttctcgtagagtactacgaatattt 3686074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 6956769 - 6956733
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  6956769 aaaatcaagaggttctcgtagagtactacgaatattt 6956733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 12702915 - 12702951
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  12702915 aaaatcaagaggttctcgtagagtactacgaatattt 12702951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 12997873 - 12997837
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  12997873 aaaatcaagaggttctcgtagagtactacgaatattt 12997837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 13104321 - 13104285
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  13104321 aaaatcaagaggttctcgtagagtactacgaatattt 13104285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 13110477 - 13110441
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  13110477 aaaatcaagaggttctcgtagagtactacgaatattt 13110441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 14738110 - 14738074
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  14738110 aaaatcaagaggttctcgtagagtactacgaatattt 14738074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 14879919 - 14879883
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  14879919 aaaatcaagaggttctcgtagagtactacgaatattt 14879883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 14886507 - 14886471
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  14886507 aaaatcaagaggttctcgtagagtactacgaatattt 14886471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 16469380 - 16469344
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  16469380 aaaatcaagaggttctcgtagagtactacgaatattt 16469344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 20435906 - 20435942
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  20435906 aaaatcaagaggttctcgtagagtactacgaatattt 20435942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 20449832 - 20449868
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  20449832 aaaatcaagaggttctcgtagagtactacgaatattt 20449868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 21637261 - 21637225
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  21637261 aaaatcaagaggttctcgtagagtactacgaatattt 21637225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 27874132 - 27874168
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  27874132 aaaatcaagaggttctcgtagagtactacgaatattt 27874168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 41433072 - 41433108
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  41433072 aaaatcaagaggttctcgtagagtactacgaatattt 41433108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 41441569 - 41441605
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  41441569 aaaatcaagaggttctcgtagagtactacgaatattt 41441605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 186655 - 186568
Alignment:
Q  48 tttttaaaatgggttgtttgaaactttttcccctttnnnnnnntttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    |||| ||||||||| ||||| ||||||||||||||        ||||||||||  ||||||||||||||||||||| |||||||||||    
T  186655 ttttcaaaatgggtggtttggaactttttccccttaaaaaaaatttgttcagtcgtgagataaaaagtgagtcaaaagctaatcaaat 186568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 170237 - 170201
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  170237 aaaatcaagaggttctcgtagagtactacgaatattt 170201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 186741 - 186705
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  186741 aaaatcaagaggttctcgtagagtactacgaatattt 186705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 791881 - 791799
Alignment:
Q  53 aaaatgggttgtttgaaactttttcccctttnnnnnnntttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||| ||||| ||||||||||||||        ||||||||||  ||||||||||||||||||||| |||||||||||    
T  791881 aaaatgggtggtttggaactttttccccttaaaaaaaatttgttcagtcgtgagataaaaagtgagtcaaaagctaatcaaat 791799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 805716 - 805634
Alignment:
Q  53 aaaatgggttgtttgaaactttttcccctttnnnnnnntttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||| ||||| ||||||||||||||        ||||||||||  ||||||||||||||||||||| |||||||||||    
T  805716 aaaatgggtggtttggaactttttccccttaaaaaaaatttgttcagtcgtgagataaaaagtgagtcaaaagctaatcaaat 805634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 17465213 - 17465295
Alignment:
Q  53 aaaatgggttgtttgaaactttttcccctttnnnnnnntttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||| ||||| ||||||||||||||        ||||||||||  ||||||||||||||||||||| |||||||||||    
T  17465213 aaaatgggtggtttggaactttttccccttaaaaaaaatttgttcagtcgtgagataaaaagtgagtcaaaagctaatcaaat 17465295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 17588001 - 17587919
Alignment:
Q  53 aaaatgggttgtttgaaactttttcccctttnnnnnnntttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||| ||||| ||||||||||||||        ||||||||||  ||||||||||||||||||||| |||||||||||    
T  17588001 aaaatgggtggtttggaactttttccccttaaaaaaaatttgttcagtcgtgagataaaaagtgagtcaaaagctaatcaaat 17587919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 37288110 - 37288192
Alignment:
Q  53 aaaatgggttgtttgaaactttttcccctttnnnnnnntttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||| ||||| ||||||||||||||        ||||||||||  ||||||||||||||||||||| |||||||||||    
T  37288110 aaaatgggtggtttggaactttttccccttaaaaaaaatttgttcagtcgtgagataaaaagtgagtcaaaagctaatcaaat 37288192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 7341848 - 7341804
Alignment:
Q  91 tttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||||  |||||||||||||||||||||||||||||||||    
T  7341848 tttgttcagtcgtgagataaaaagtgagtcaaacgctaatcaaat 7341804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 12585759 - 12585795
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| |||||||||||||||||||||||||||||||    
T  12585759 aaaatcaagaggttctcgtagagtattacgaatattt 12585795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 791972 - 791936
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  791972 aaaatcaagaggttctcgtagagtactacgaatattt 791936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 4831077 - 4831041
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  4831077 aaaatcaagaggttctcgtagagtactacgaatattt 4831041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 7341978 - 7341942
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  7341978 aaaatcaagaggttctcgtagagtactacgaatattt 7341942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 12595533 - 12595569
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  12595533 aaaatcaagaggttcttgtagagtattacgaatattt 12595569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 12606077 - 12606041
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  12606077 aaaatcaagaggttctcgtagagtactacgaatattt 12606041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 16263793 - 16263757
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  16263793 aaaatcaagaggttctcgtagagtactacgaatattt 16263757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 16271459 - 16271423
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  16271459 aaaatcaagaggttctcgtagagtactacgaatattt 16271423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 16280486 - 16280450
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  16280486 aaaatcaagaggttctcgtagagtactacgaatattt 16280450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 16294688 - 16294652
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  16294688 aaaatcaagaggttctcgtagagtactacgaatattt 16294652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 17465122 - 17465158
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  17465122 aaaatcaagaggttctcgtagagtactacgaatattt 17465158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 17588092 - 17588056
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  17588092 aaaatcaagaggttctcgtagagtactacgaatattt 17588056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 18777731 - 18777695
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  18777731 aaaatcaagaggttctcgtagagtactacgaatattt 18777695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 26125579 - 26125615
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  26125579 aaaatcaagaggttctcgtagagtactacgaatattt 26125615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 37288019 - 37288055
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  37288019 aaaatcaagaggttctcgtagagtactacgaatattt 37288055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 43907594 - 43907630
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  43907594 aaaatcaagaggttctcgtagagtactacgaatattt 43907630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 44417923 - 44417887
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  44417923 aaaatcaagaggttctcgtagagtactacgaatattt 44417887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 21746469 - 21746425
Alignment:
Q  91 tttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||||  |||||||||||||||||||||||||||||||||    
T  21746469 tttgttcagtcgtgagataaaaagtgagtcaaacgctaatcaaat 21746425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 24060472 - 24060391
Alignment:
Q  53 aaaatgggttgtttgaaactttttcccctttnnnnnnntttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||| ||||| ||||||||||||||        ||||||||||  ||||||||||||||||||||| |||||||||||    
T  24060472 aaaatgggtggtttggaactttttcccctt-aaaaaaatttgttcagtcgtgagataaaaagtgagtcaaaagctaatcaaat 24060391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 34461582 - 34461626
Alignment:
Q  91 tttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||||  ||||||||||||||||||||| |||||||||||    
T  34461582 tttgttcagtcgtgagataaaaagtgagtcaaaagctaatcaaat 34461626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 34475839 - 34475883
Alignment:
Q  91 tttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||||  ||||||||||||||||||||| |||||||||||    
T  34475839 tttgttcagtcgtgagataaaaagtgagtcaaaagctaatcaaat 34475883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 20638534 - 20638498
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  20638534 aaaatcaagaggttctcgtagagtactacgaatattt 20638498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 21746600 - 21746564
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  21746600 aaaatcaagaggttctcgtagagtactacgaatattt 21746564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 24060563 - 24060527
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  24060563 aaaatcaagaggttctcgtagagtactacgaatattt 24060527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 29894493 - 29894529
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  29894493 aaaatcaagaggttctcgtagagtactacgaatattt 29894529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 29903215 - 29903251
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  29903215 aaaatcaagaggttctcgtagagtactacgaatattt 29903251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 30250600 - 30250636
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  30250600 aaaatcaagaggttctcgtagagtactacgaatattt 30250636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 34461452 - 34461488
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  34461452 aaaatcaagaggttctcgtagagtactacgaatattt 34461488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 34475709 - 34475745
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  34475709 aaaatcaagaggttctcgtagagtactacgaatattt 34475745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 36449631 - 36449667
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  36449631 aaaatcaagaggttctcgtagagtactacgaatattt 36449667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 36456019 - 36456055
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  36456019 aaaatcaagaggttctcgtagagtactacgaatattt 36456055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 37578028 - 37578064
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  37578028 aaaatcaagaggttctcgtagagtactacgaatattt 37578064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 37587138 - 37587174
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  37587138 aaaatcaagaggttctcgtagagtactacgaatattt 37587174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 38226639 - 38226603
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  38226639 aaaatcaagaggttctcgtagagtactacgaatattt 38226603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 56458 - 56414
Alignment:
Q  91 tttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||    
T  56458 tttgttcagtcgtgagataaaaagtgattcaaacgctaatcaaat 56414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 30; Significance: 0.0000001; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 21749054 - 21749010
Alignment:
Q  91 tttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||    
T  21749054 tttgttcagtcgtgagataaaaactgagtcaaacgctaatcaaat 21749010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 21753631 - 21753587
Alignment:
Q  91 tttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||    
T  21753631 tttgttcagtcgtgagataaaaactgagtcaaacgctaatcaaat 21753587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 21767782 - 21767738
Alignment:
Q  91 tttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||    
T  21767782 tttgttcagtcgtgagataaaaactgagtcaaacgctaatcaaat 21767738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 5869834 - 5869798
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  5869834 aaaatcaagaggttctcgtagagtactacgaatattt 5869798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 5872945 - 5872909
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  5872945 aaaatcaagaggttctcgtagagtactacgaatattt 5872909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 18501602 - 18501638
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  18501602 aaaatcaagaggttctcgtagagtactacgaatattt 18501638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 20273693 - 20273657
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  20273693 aaaatcaagaggttctcgtagagtactacgaatattt 20273657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 21767911 - 21767875
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  21767911 aaaatcaagaggttctcgtagagtactacgaatattt 21767875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 133
Target Start/End: Complemental strand, 24868149 - 24868121
Alignment:
Q  105 ataaaaagtgagtcaaacgctaatcaaat 133  Q
    |||||||||||||||||||||||||||||    
T  24868149 ataaaaagtgagtcaaacgctaatcaaat 24868121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 24868301 - 24868265
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  24868301 aaaatcaagaggttttcgtagagtattacgaatattt 24868265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 27342135 - 27342099
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  27342135 aaaatcaagaggttctcgtagagtactacgaatattt 27342099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 27343245 - 27343209
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  27343245 aaaatcaagaggttctcgtagagtactacgaatattt 27343209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 29586553 - 29586589
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  29586553 aaaatcaagaggttctcgtagagtactacgaatattt 29586589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 35082316 - 35082280
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  35082316 aaaatcaagaggttctcgtagagtactacgaatattt 35082280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 40389358 - 40389322
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  40389358 aaaatcaagaggttctcgtagagtactacgaatattt 40389322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 30; Significance: 0.0000001; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 27167602 - 27167646
Alignment:
Q  91 tttgttcagt--tgagataaaaagtgagtcaaacgctaatcaaat 133  Q
    ||||||||||  ||||||||||||||||||||| |||||||||||    
T  27167602 tttgttcagtcgtgagataaaaagtgagtcaaaagctaatcaaat 27167646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 2334047 - 2334011
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  2334047 aaaatcaagaggttctcgtagagtactacgaatattt 2334011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 2686859 - 2686895
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  2686859 aaaatcaagaggttctcgtagagtactacgaatattt 2686895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 9009788 - 9009824
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  9009788 aaaatcaagaggttctcgtagagtactacgaatattt 9009824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 18099687 - 18099723
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  18099687 aaaatcaagaggttctcgtagagtactacgaatattt 18099723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 18702907 - 18702871
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  18702907 aaaatcaagaggttctcgtagagtactacgaatattt 18702871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 20430742 - 20430778
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  20430742 aaaatcaagaggttctcgtagagtactacgaatattt 20430778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 35077128 - 35077164
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  35077128 aaaatcaagaggttctcgtagagtactacgaatattt 35077164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 44319655 - 44319691
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  44319655 aaaatcaagaggttctcgtagagtactacgaatattt 44319691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 44831237 - 44831201
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  44831237 aaaatcaagaggttctcgtagagtactacgaatattt 44831201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 49934463 - 49934499
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  49934463 aaaattaagaggttctcgtagagtactacaaatattt 49934499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1699 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1699
Description:

Target: scaffold1699; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 54 - 18
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  54 aaaatcaagaggttctcgtagagtactacgaatattt 18  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0799 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0799
Description:

Target: scaffold0799; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 4545 - 4581
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  4545 aaaatcaagaggttctcgtagagtactacgaatattt 4581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0582 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0582
Description:

Target: scaffold0582; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 6020 - 5984
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  6020 aaaatcaagaggttctcgtagagtactacgaatattt 5984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 10711 - 10747
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  10711 aaaatcaagaggttctcgtagagtactacgaatattt 10747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0478 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 1207 - 1171
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  1207 aaaatcaagaggttctcgtagagtactacgaatattt 1171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 2869 - 2905
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  2869 aaaatcaagaggttctcgtagagtactacgaatattt 2905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 2415 - 2451
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  2415 aaaatcaagaggttctcgtagagtactacgaatattt 2451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 38886 - 38850
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  38886 aaaatcaagaggttctcgtagagtactacgaatattt 38850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 28894 - 28930
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  28894 aaaatcaagaggttctcgtagagtactacgaatattt 28930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 25116 - 25152
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  25116 aaaatcaagaggttctcgtagagtactacgaatattt 25152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 1685 - 1721
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  1685 aaaatcaagaggttctcgtagagtactacgaatattt 1721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 56849 - 56813
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  56849 aaaatcaagaggttctcgtagagtactacgaatattt 56813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 31995 - 31959
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  31995 aaaatcaagaggttctcgtagagtactacgaatattt 31959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 36208 - 36172
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  36208 aaaatcaagaggttctcgtagagtactacgaatattt 36172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 24951 - 24987
Alignment:
Q  13 aaaattaagaggttctcgtagagtattacgaatattt 49  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  24951 aaaatcaagaggttctcgtagagtactacgaatattt 24987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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