View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17825_high_1 (Length: 425)

Name: NF17825_high_1
Description: NF17825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17825_high_1
NF17825_high_1
[»] chr7 (26 HSPs)
chr7 (64-420)||(29013111-29013468)
chr7 (1-60)||(29012084-29012143)
chr7 (108-161)||(5418303-5418356)
chr7 (108-163)||(34869647-34869702)
chr7 (108-161)||(44951384-44951437)
chr7 (108-172)||(21078135-21078199)
chr7 (108-163)||(11594187-11594242)
chr7 (108-163)||(12841275-12841330)
chr7 (108-163)||(22349847-22349902)
chr7 (108-163)||(28208328-28208383)
chr7 (108-163)||(29650611-29650666)
chr7 (108-163)||(31005432-31005487)
chr7 (108-163)||(31682602-31682657)
chr7 (108-163)||(31869102-31869157)
chr7 (108-163)||(37618172-37618227)
chr7 (108-163)||(39906372-39906427)
chr7 (108-163)||(48919339-48919394)
chr7 (108-170)||(33349806-33349868)
chr7 (108-161)||(2885722-2885775)
chr7 (108-161)||(20158671-20158724)
chr7 (108-161)||(27649009-27649062)
chr7 (108-161)||(27893563-27893616)
chr7 (108-161)||(36101777-36101830)
chr7 (108-161)||(40979928-40979981)
chr7 (110-163)||(46355858-46355911)
chr7 (111-163)||(6375095-6375147)
[»] chr5 (15 HSPs)
chr5 (336-420)||(13141480-13141564)
chr5 (108-163)||(31220609-31220664)
chr5 (108-202)||(2645178-2645272)
chr5 (108-163)||(408494-408549)
chr5 (108-163)||(3302071-3302126)
chr5 (108-163)||(4496611-4496666)
chr5 (108-163)||(16347380-16347435)
chr5 (108-163)||(29816609-29816664)
chr5 (64-129)||(13141814-13141880)
chr5 (111-160)||(11002424-11002473)
chr5 (108-161)||(36551375-36551428)
chr5 (108-161)||(42576239-42576292)
chr5 (110-198)||(219462-219550)
chr5 (108-172)||(18855825-18855889)
chr5 (109-161)||(30639717-30639769)
[»] chr2 (19 HSPs)
chr2 (108-213)||(8197541-8197646)
chr2 (108-213)||(8202301-8202406)
chr2 (108-166)||(38328370-38328428)
chr2 (108-161)||(12734929-12734982)
chr2 (108-163)||(227416-227471)
chr2 (108-163)||(3635323-3635378)
chr2 (108-163)||(4807822-4807877)
chr2 (108-163)||(12474927-12474982)
chr2 (108-163)||(17670695-17670750)
chr2 (108-163)||(25834905-25834960)
chr2 (108-163)||(28508905-28508960)
chr2 (108-163)||(30306259-30306314)
chr2 (108-163)||(41763043-41763098)
chr2 (108-161)||(9531600-9531653)
chr2 (108-161)||(12520062-12520115)
chr2 (108-161)||(43573130-43573183)
chr2 (108-160)||(28960211-28960263)
chr2 (106-162)||(36183679-36183735)
chr2 (108-172)||(41197227-41197291)
[»] chr8 (9 HSPs)
chr8 (108-163)||(42854004-42854059)
chr8 (108-170)||(25473403-25473465)
chr8 (109-173)||(33666578-33666642)
chr8 (108-163)||(11523723-11523778)
chr8 (108-163)||(14742082-14742137)
chr8 (108-163)||(36545376-36545431)
chr8 (108-163)||(44529452-44529507)
chr8 (108-161)||(1928587-1928640)
chr8 (108-161)||(45419464-45419517)
[»] chr3 (16 HSPs)
chr3 (108-161)||(44133845-44133898)
chr3 (108-161)||(49503568-49503621)
chr3 (108-163)||(5169059-5169114)
chr3 (108-163)||(12096705-12096760)
chr3 (108-163)||(31566161-31566216)
chr3 (108-163)||(40273205-40273260)
chr3 (108-163)||(53519807-53519862)
chr3 (108-161)||(2133612-2133665)
chr3 (108-161)||(32052541-32052594)
chr3 (108-161)||(35033375-35033428)
chr3 (111-160)||(46140637-46140686)
chr3 (108-161)||(48508464-48508517)
chr3 (108-161)||(52139029-52139082)
chr3 (108-161)||(54128608-54128661)
chr3 (108-156)||(33512973-33513021)
chr3 (108-160)||(50249607-50249659)
[»] chr1 (16 HSPs)
chr1 (108-161)||(21769711-21769764)
chr1 (109-161)||(4590533-4590585)
chr1 (108-163)||(1210972-1211027)
chr1 (108-163)||(25979231-25979286)
chr1 (108-163)||(29577479-29577534)
chr1 (108-163)||(30202130-30202185)
chr1 (108-163)||(44751711-44751766)
chr1 (108-163)||(49347393-49347448)
chr1 (108-163)||(52921307-52921362)
chr1 (108-170)||(9592954-9593016)
chr1 (108-174)||(41165498-41165564)
chr1 (108-161)||(25715326-25715379)
chr1 (108-161)||(41560458-41560511)
chr1 (108-161)||(43481798-43481851)
chr1 (108-161)||(44941776-44941829)
chr1 (109-161)||(52561590-52561642)
[»] chr4 (20 HSPs)
chr4 (107-163)||(31959813-31959869)
chr4 (108-212)||(32339737-32339841)
chr4 (108-160)||(49738550-49738602)
chr4 (108-163)||(436456-436511)
chr4 (108-163)||(43434151-43434206)
chr4 (108-163)||(50238615-50238670)
chr4 (108-163)||(50238701-50238756)
chr4 (108-163)||(52569515-52569570)
chr4 (111-161)||(15661875-15661925)
chr4 (108-162)||(21528516-21528570)
chr4 (147-213)||(38903757-38903823)
chr4 (108-161)||(25575053-25575106)
chr4 (108-161)||(30634106-30634159)
chr4 (108-161)||(55007975-55008028)
chr4 (108-212)||(22420717-22420821)
chr4 (109-157)||(26037506-26037554)
chr4 (108-160)||(44719361-44719413)
chr4 (108-160)||(45209205-45209257)
chr4 (108-172)||(48174093-48174157)
chr4 (112-212)||(54470385-54470485)
[»] scaffold0570 (1 HSPs)
scaffold0570 (108-163)||(948-1003)
[»] scaffold0168 (1 HSPs)
scaffold0168 (108-163)||(28889-28944)
[»] scaffold0018 (1 HSPs)
scaffold0018 (108-163)||(31695-31750)
[»] chr6 (10 HSPs)
chr6 (108-163)||(1615223-1615278)
chr6 (108-163)||(9706997-9707052)
chr6 (108-163)||(14031022-14031077)
chr6 (108-163)||(28085603-28085658)
chr6 (108-163)||(34143765-34143820)
chr6 (108-163)||(34156381-34156436)
chr6 (108-163)||(34934830-34934885)
chr6 (109-163)||(608388-608442)
chr6 (108-161)||(12890804-12890857)
chr6 (110-163)||(30789076-30789129)


Alignment Details
Target: chr7 (Bit Score: 310; Significance: 1e-174; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 64 - 420
Target Start/End: Original strand, 29013111 - 29013468
Alignment:
Q  64 gtataccgaacaaatttagcttaccggagtcattgaacacatcgacaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29013111 gtataccgaacaaatttagcttactgaagtcattgaacacatcaacaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaataa 29013210  T
Q  164 agctataatactatgtcacatatcacatctctatccaacccattaatcttattaatagtttctcatataacttaacaatttc-gatcaaatattcataca 262  Q
    ||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||    
T  29013211 agccataatattatgtcacatatcacatctctatccaacccattaatcttcttaatagtatctcatataacttaacaatttccgatcaaatattcataca 29013310  T
Q  263 tgaatgattaaatttgctttcgcttaaaatcaattcttgttctaaaattgcaatcttacatacagagggataacataccagtttcgaaacgttcttccag 362  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29013311 tgaatgattaaatttgctttcacttaaaatcaattcttgttctaaaattgcaatcttacatacagagggataacataccagttttgaaacgttcttccag 29013410  T
Q  363 aaatgtggactaggctttgcagtaaaataagccgttcgcagagccaattcttgttcct 420  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29013411 aaatgtggactaggctttgcagtaaaataagccgttcgcagagccaattcttgttcct 29013468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 29012084 - 29012143
Alignment:
Q  1 agataaggtagtgataaaccaaagtcatcgtctttgagggcaaatggtgaatcactcaga 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29012084 agataaggtagtgataaaccaaagtcatcgtctttgagggcaaatggtgaatcactcaga 29012143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 5418356 - 5418303
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| ||||||||  |||||||||||||||||||||    
T  5418356 acaacaacaaccaagccttatcccactaaatggggtcgactacatggatcaaat 5418303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 34869702 - 34869647
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| || ||||| |||||||||||||||||    
T  34869702 acaacaacaaccaagccttatcccactaattagggtcggctacatggatcaaatga 34869647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 44951437 - 44951384
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||||||||||  |||||| ||| |||| |||||||||||||||    
T  44951437 acaacaacaaccaaaccttataccactaagtattgtcggctacatggatcaaat 44951384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 21078199 - 21078135
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatgaagctataat 172  Q
    |||||||||||||| ||||||| ||||||||   |||| ||||||||||||||||| || |||||    
T  21078199 acaacaacaaccaagccttatcccactaaatgaagtcggctacatggatcaaatgacgccataat 21078135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 11594242 - 11594187
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  11594242 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 11594187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 12841275 - 12841330
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  12841275 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 12841330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 22349902 - 22349847
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||| ||| ||||||| |||||| |  |||||||||||||||||||||||    
T  22349902 acaacaacaatcaagccttatcccactaagtggggtcgactacatggatcaaatga 22349847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 28208328 - 28208383
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  28208328 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 28208383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 29650666 - 29650611
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  29650666 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 29650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 31005487 - 31005432
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  31005487 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 31005432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 31682602 - 31682657
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  31682602 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 31682657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 31869102 - 31869157
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  31869102 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 31869157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 37618227 - 37618172
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  37618227 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 37618172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 39906372 - 39906427
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  39906372 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 39906427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 48919394 - 48919339
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| || ||| |  |||||||||||||||||||||||    
T  48919394 acaacaacaaccaagccttatcccattaagtggggtcgactacatggatcaaatga 48919339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 33349806 - 33349868
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatgaagctata 170  Q
    |||||||||||||| ||||||| || ||| |  ||||| ||||||||||||||||| ||||||    
T  33349806 acaacaacaaccaagccttatcccattaagtgaggtcggctacatggatcaaatgacgctata 33349868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 2885722 - 2885775
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  2885722 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 2885775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 20158671 - 20158724
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| || ||||  |||||||||||||||    
T  20158671 acaacaacaaccaagccttatcccactaagtagggtcagctacatggatcaaat 20158724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 27649062 - 27649009
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  27649062 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 27649009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 27893563 - 27893616
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| || ||||| ||||||| |||||||    
T  27893563 acaacaacaaccaagccttatcgcactaagtagggtcggctacatgaatcaaat 27893616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 36101777 - 36101830
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  |||| ||||||||||||||||    
T  36101777 acaacaacaaccaagccttatcccactaagtggggtcaactacatggatcaaat 36101830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 40979928 - 40979981
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  40979928 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 40979981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 46355858 - 46355911
Alignment:
Q  110 aacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  46355858 aacaacaaccaagccttatctcactaagtggggtcggctacatggatcaaatga 46355911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 6375147 - 6375095
Alignment:
Q  111 acaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    ||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  6375147 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 6375095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 336 - 420
Target Start/End: Complemental strand, 13141564 - 13141480
Alignment:
Q  336 cataccagtttcgaaacgttcttccagaaatgtggactaggctttgcagtaaaataagccgttcgcagagccaattcttgttcct 420  Q
    ||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| || | || |||||| ||||||||||    
T  13141564 cataccagtttcgaaacattcttccagaaatgaggactaggttttgcagtaaaataagctgtgctcaaagccaactcttgttcct 13141480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 31220664 - 31220609
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||||||||||| || |||||| | ||||||| |||||||||||||    
T  31220664 acaacaacaaccaaaccttatctcattaaataggatcgactatatggatcaaatga 31220609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 202
Target Start/End: Complemental strand, 2645272 - 2645178
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatgaagctataatactatgtcacatatcacatctctatccaac 202  Q
    |||||||||||||| ||||||| |||||| || || || |||||||||||||| || ||||||||  | | ||| ||| ||||| ||||||||||    
T  2645272 acaacaacaaccaagccttatcccactaagtagggccggctacatggatcaaacgatgctataatgttttatcaaataccacatttctatccaac 2645178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 408494 - 408549
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  408494 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 408549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 3302126 - 3302071
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  3302126 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 3302071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 4496666 - 4496611
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  4496666 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 4496611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 16347380 - 16347435
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    ||||||||||||||  |||||| |||||| || ||||| |||||||||||||||||    
T  16347380 acaacaacaaccaagtcttatcccactaagtagggtcggctacatggatcaaatga 16347435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 29816664 - 29816609
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  29816664 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 29816609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 13141880 - 13141814
Alignment:
Q  64 gtataccgaacaaatttagcttaccggagtca-ttgaacacatcgacaacaacaaccaaaccttatc 129  Q
    ||||||| |||||||||||||||||| ||||| ||| ||||| | |||||||||| ||| |||||||    
T  13141880 gtataccaaacaaatttagcttaccgaagtcatttggacacaacaacaacaacaatcaagccttatc 13141814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 11002424 - 11002473
Alignment:
Q  111 acaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaa 160  Q
    ||||||||||| ||||||| |||||| || ||||||||||||| ||||||    
T  11002424 acaacaaccaagccttatcccactaagtagggtcgactacatgaatcaaa 11002473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 36551428 - 36551375
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  36551428 acaacaacaaccaagccttatctcactaagtggggtcggctacatggatcaaat 36551375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 42576292 - 42576239
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  42576292 acaacaacaaccaagccttatcccactaagtcgggtcggctacatggatcaaat 42576239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 110 - 198
Target Start/End: Original strand, 219462 - 219550
Alignment:
Q  110 aacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatgaagctataatactatgtcacatatcacatctctatc 198  Q
    |||||||||  || |||||| ||||||||| ||||  |||||||||||||| ||  |||||||  | ||||| |||||| |||||||||    
T  219462 aacaacaactcaatcttatcccactaaatagggtcagctacatggatcaaaagaccctataatgttttgtcatatatcatatctctatc 219550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 18855889 - 18855825
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatgaagctataat 172  Q
    ||||||||||||||  |||||| |||||| |  ||||| ||||||||||||||| | ||||||||    
T  18855889 acaacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaattatgctataat 18855825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 30639717 - 30639769
Alignment:
Q  109 caacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    ||||||| ||||| ||||||| ||||||||  ||||| |||||||||||||||    
T  30639717 caacaactaccaatccttatcccactaaatggggtcggctacatggatcaaat 30639769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 213
Target Start/End: Original strand, 8197541 - 8197646
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatgaagctataatactatgtcacatatcacatctctatccaacccatt 207  Q
    |||||||||||||| | ||||| |||||| || ||||| |||||||||||||| || || |||||| | | ||| |||||| || |||||||||| ||||    
T  8197541 acaacaacaaccaagcattatcccactaagtagggtcggctacatggatcaaacgacgccataatattctatcatatatcatatttctatccaactcatt 8197640  T
Q  208 aatctt 213  Q
    ||||||    
T  8197641 aatctt 8197646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 108 - 213
Target Start/End: Original strand, 8202301 - 8202406
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatgaagctataatactatgtcacatatcacatctctatccaacccatt 207  Q
    |||||||||||||| | ||||| |||||| || ||||| |||||||||||||| || || |||||| | | ||| |||||| || |||||||||| ||||    
T  8202301 acaacaacaaccaagcattatcccactaagtagggtcggctacatggatcaaacgacgccataatattctatcatatatcatatttctatccaactcatt 8202400  T
Q  208 aatctt 213  Q
    ||||||    
T  8202401 aatctt 8202406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 38328370 - 38328428
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatgaagc 166  Q
    |||||||||||||| ||||||| |||||| |  ||||| ||||||||||||||||||||    
T  38328370 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgaagc 38328428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 12734982 - 12734929
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  |||||||||||||||||||||    
T  12734982 acaacaacaaccaagccttatcccactaagtggggtcgactacatggatcaaat 12734929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 227471 - 227416
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  227471 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 227416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 3635323 - 3635378
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  3635323 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 3635378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 4807877 - 4807822
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  4807877 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 4807822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 12474927 - 12474982
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  12474927 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 12474982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 17670750 - 17670695
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  17670750 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 17670695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 25834960 - 25834905
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  25834960 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 25834905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 28508960 - 28508905
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  28508960 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 28508905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 30306314 - 30306259
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  30306314 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 30306259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 41763043 - 41763098
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  41763043 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 41763098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 9531600 - 9531653
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  9531600 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 9531653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 12520062 - 12520115
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  12520062 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 12520115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 43573130 - 43573183
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  43573130 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 43573183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 28960211 - 28960263
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaa 160  Q
    |||||||||||||| ||||||| ||||||||   |||||||||||| ||||||    
T  28960211 acaacaacaaccaagccttatcccactaaatggagtcgactacatgaatcaaa 28960263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 36183735 - 36183679
Alignment:
Q  106 cgacaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatg 162  Q
    |||||||||||||||| |||||||  ||||| |  ||||| ||||||||||||||||    
T  36183735 cgacaacaacaaccaagccttatcctactaagtggggtcggctacatggatcaaatg 36183679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 41197227 - 41197291
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatgaagctataat 172  Q
    |||||||||||||| ||||||| ||  || |  ||||||||||||||||||||||| || |||||    
T  41197227 acaacaacaaccaagccttatcccatcaagtggggtcgactacatggatcaaatgacgccataat 41197291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 42854004 - 42854059
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||| ||||||||||||| ||||||||  ||||| |||||||||||||||||    
T  42854004 acaacaaccaccaaaccttatcccactaaatggggtcggctacatggatcaaatga 42854059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 25473403 - 25473465
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatgaagctata 170  Q
    |||||||||||||| ||||||| |||||| |  ||||| ||||||||||||||||| ||||||    
T  25473403 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgctata 25473465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 173
Target Start/End: Original strand, 33666578 - 33666642
Alignment:
Q  109 caacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatgaagctataata 173  Q
    |||||||||||||  ||||||||||||| || ||||||||||||| || ||| ||||| ||||||    
T  33666578 caacaacaaccaagtcttatcacactaagtagggtcgactacatgaatgaaacgaagccataata 33666642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 11523723 - 11523778
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  11523723 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 11523778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 14742082 - 14742137
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  14742082 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 14742137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 36545431 - 36545376
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  36545431 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 36545376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 44529507 - 44529452
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  44529507 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 44529452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 1928587 - 1928640
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  1928587 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 1928640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 45419517 - 45419464
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  45419517 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 45419464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000006; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 44133845 - 44133898
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||||| ||||  ||||||||| | |||||||||||||||||||    
T  44133845 acaacaacaaccaaactttataccactaaataagatcgactacatggatcaaat 44133898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 49503568 - 49503621
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| || ||||| |||||||||||||||    
T  49503568 acaacaacaaccaagccttatcccactaagtagggtcggctacatggatcaaat 49503621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 5169114 - 5169059
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  5169114 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 5169059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 12096705 - 12096760
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  12096705 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 12096760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 31566161 - 31566216
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  31566161 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 31566216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 40273205 - 40273260
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    ||||||||||||||||||| || |||||| |  ||||| |||||||||||||||||    
T  40273205 acaacaacaaccaaaccttttcccactaagtggggtcggctacatggatcaaatga 40273260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 53519862 - 53519807
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  53519862 acaacaacaaccaagccttatctcactaagtggggtcggctacatggatcaaatga 53519807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 2133612 - 2133665
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  |||||| ||||||||||||||    
T  2133612 acaacaacaaccaagccttatcccactaagtggggtcgagtacatggatcaaat 2133665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 32052541 - 32052594
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    ||||||||||||||||||||||||||||| |   |||| ||||||| |||||||    
T  32052541 acaacaacaaccaaaccttatcacactaagtcacgtcggctacatgaatcaaat 32052594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 35033428 - 35033375
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| ||||| ||  ||||| |||||||||||||||    
T  35033428 acaacaacaaccaagccttatcccactagatgaggtcggctacatggatcaaat 35033375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 46140686 - 46140637
Alignment:
Q  111 acaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaa 160  Q
    ||||||||||||||||||| ||| || |  ||||||||||||||||||||    
T  46140686 acaacaaccaaaccttatctcacaaagtggggtcgactacatggatcaaa 46140637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 48508517 - 48508464
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  48508517 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 48508464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 52139082 - 52139029
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  52139082 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 52139029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 54128661 - 54128608
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  54128661 acaacaacaaccaagccttatcccactaagtggggtcgcctacatggatcaaat 54128608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 33513021 - 33512973
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggat 156  Q
    |||||||||| |||||||||||| ||||| | | |||||||||||||||    
T  33513021 acaacaacaatcaaaccttatcatactaagtgtagtcgactacatggat 33512973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 50249659 - 50249607
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaa 160  Q
    |||||||||||||| || |||| |||||| |  ||||||||||||||||||||    
T  50249659 acaacaacaaccaagccgtatcccactaagtggggtcgactacatggatcaaa 50249607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000006; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 21769711 - 21769764
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| |||||||||||||| |  ||||| |||||||||||||||    
T  21769711 acaacaacaaccaagccttatcacactaagtggggtcggctacatggatcaaat 21769764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 4590533 - 4590585
Alignment:
Q  109 caacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    ||||||||||||||||||||| |||||| |  ||||| |||||||||||||||    
T  4590533 caacaacaaccaaaccttatcccactaagtggggtcggctacatggatcaaat 4590585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 1211027 - 1210972
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  1211027 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 1210972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 25979231 - 25979286
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  25979231 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 25979286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 29577534 - 29577479
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  29577534 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 29577479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 30202130 - 30202185
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  30202130 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 30202185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 44751766 - 44751711
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  44751766 acaacaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaatga 44751711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 49347393 - 49347448
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  49347393 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 49347448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 52921362 - 52921307
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  52921362 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 52921307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 9593016 - 9592954
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatgaagctata 170  Q
    |||||||||||||| ||||||| || ||| |  ||||| ||||||||||||||||| ||||||    
T  9593016 acaacaacaaccaagccttatcccattaagtggggtcggctacatggatcaaatgacgctata 9592954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 41165564 - 41165498
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatgaagctataatac 174  Q
    |||||||||||||| |||| || |||||| |  ||||| ||||||||||||||||| || |||||||    
T  41165564 acaacaacaaccaagccttttcccactaagtggggtcggctacatggatcaaatgacgccataatac 41165498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 25715326 - 25715379
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  25715326 acaacaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaat 25715379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 41560511 - 41560458
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  41560511 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 41560458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 43481798 - 43481851
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  43481798 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 43481851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 44941776 - 44941829
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  44941776 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 44941829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 52561590 - 52561642
Alignment:
Q  109 caacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    ||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  52561590 caacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 52561642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 31959813 - 31959869
Alignment:
Q  107 gacaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    ||||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  31959813 gacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 31959869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 212
Target Start/End: Complemental strand, 32339841 - 32339737
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatgaagctataatactatgtcacatatcacatctctatccaacccatt 207  Q
    |||||||||||||| ||||||| |||||| ||   | |||||||||||||||| || || |||||  | | ||| |||||| ||||||||||||| | ||    
T  32339841 acaacaacaaccaagccttatcccactaagtagaatagactacatggatcaaacgacgccataattttctatcatatatcatatctctatccaactcgtt 32339742  T
Q  208 aatct 212  Q
    |||||    
T  32339741 aatct 32339737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 49738550 - 49738602
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaa 160  Q
    |||||||||||||| ||||||| ||||||||  ||||| ||||||||||||||    
T  49738550 acaacaacaaccaagccttatcccactaaatggggtcggctacatggatcaaa 49738602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 436511 - 436456
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  436511 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 436456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 43434206 - 43434151
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  | |||||||||||||||||||||    
T  43434206 acaacaacaaccaagccttatcccactaagtgggctcgactacatggatcaaatga 43434151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 50238615 - 50238670
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  50238615 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 50238670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 50238701 - 50238756
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  50238701 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 50238756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 52569515 - 52569570
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  52569515 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 52569570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 15661875 - 15661925
Alignment:
Q  111 acaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    ||||||||||||||||||| |||||| |  ||||| |||||||||||||||    
T  15661875 acaacaaccaaaccttatcccactaagtggggtcggctacatggatcaaat 15661925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 21528570 - 21528516
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatg 162  Q
    |||||||||||||| ||||||| |||||| |  ||||| ||||||||||||||||    
T  21528570 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatg 21528516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 38903757 - 38903823
Alignment:
Q  147 ctacatggatcaaatgaagctataatactatgtcacatatcacatctctatccaacccattaatctt 213  Q
    |||||||||||||| || || |||||  ||||||| |||||| ||||||||| ||| ||||||||||    
T  38903757 ctacatggatcaaacgatgccataatgttatgtcatatatcatatctctatcaaactcattaatctt 38903823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 25575106 - 25575053
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| ||||||||  ||||  |||||||||||||||    
T  25575106 acaacaacaaccaagccttatcccactaaatggggtctgctacatggatcaaat 25575053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 30634106 - 30634159
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  30634106 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 30634159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 55008028 - 55007975
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  55008028 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 55007975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 212
Target Start/End: Original strand, 22420717 - 22420821
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatgaagctataatactatgtcacatatcacatctctatccaacccatt 207  Q
    |||||||||||||| ||||||| |||||| |  |||| ||||||| |||||||  | || ||||| || | |||  || || ||||||||||||| ||||    
T  22420717 acaacaacaaccaagccttatcccactaagtggggtcaactacatagatcaaacaacgccataatgctctatcatttaccatatctctatccaactcatt 22420816  T
Q  208 aatct 212  Q
    |||||    
T  22420817 aatct 22420821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 26037506 - 26037554
Alignment:
Q  109 caacaacaaccaaaccttatcacactaaatatggtcgactacatggatc 157  Q
    ||||||||||||||||||||| |||||| |  ||||| |||||||||||    
T  26037506 caacaacaaccaaaccttatcccactaagtggggtcggctacatggatc 26037554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 44719361 - 44719413
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaa 160  Q
    ||||||||||||||  |||||| |||||| || ||||| ||||||||||||||    
T  44719361 acaacaacaaccaagtcttatcccactaagtagggtcggctacatggatcaaa 44719413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 45209205 - 45209257
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaa 160  Q
    |||||||||||||| ||||||| |||||| |  ||||| ||||||||||||||    
T  45209205 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 45209257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 48174093 - 48174157
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatgaagctataat 172  Q
    |||||||||||||| ||||||| |||||| |  ||||  ||||||||||||||||| || |||||    
T  48174093 acaacaacaaccaagccttatcccactaagtggggtctgctacatggatcaaatgacgccataat 48174157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 112 - 212
Target Start/End: Complemental strand, 54470485 - 54470385
Alignment:
Q  112 caacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatgaagctataatactatgtcacatatcacatctctatccaacccattaatc 211  Q
    |||||||||| ||| ||| |||||| |  ||| | ||||||||||||||||| || ||||| ||  |||| ||| || || |||||||||| ||||||||    
T  54470485 caacaaccaagcctaatcccactaagtggggttggctacatggatcaaatgacgcaataatgctcagtcatataccatatttctatccaactcattaatc 54470386  T
Q  212 t 212  Q
    |    
T  54470385 t 54470385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 948 - 1003
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| ||||||||  ||||  |||||||||||||||||    
T  948 acaacaacaaccaagccttatcccactaaatggggtcagctacatggatcaaatga 1003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 28889 - 28944
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  28889 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 28944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 31750 - 31695
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  31750 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 31695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.00000001; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 1615223 - 1615278
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    ||||||||||||||  |||||| ||||||||  ||||| |||||||||||||||||    
T  1615223 acaacaacaaccaagtcttatcccactaaatgaggtcggctacatggatcaaatga 1615278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 9707052 - 9706997
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  9707052 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 9706997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 14031077 - 14031022
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||||| ||||| ||||||||| |||||  || |||||||||||||    
T  14031077 acaacaacaaccaaactttatcccactaaatagggtcggttatatggatcaaatga 14031022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 28085658 - 28085603
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  28085658 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 28085603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 34143765 - 34143820
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| || ||| |  |||||||||||||||||||||||    
T  34143765 acaacaacaaccaagccttatcccaataagtggggtcgactacatggatcaaatga 34143820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 34156381 - 34156436
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| || ||| |  |||||||||||||||||||||||    
T  34156381 acaacaacaaccaagccttatcccaataagtggggtcgactacatggatcaaatga 34156436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 34934830 - 34934885
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||||    
T  34934830 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatga 34934885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 109 - 163
Target Start/End: Complemental strand, 608442 - 608388
Alignment:
Q  109 caacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||||  |||||| |||||| || ||||| |||||||||||||||||    
T  608442 caacaacaaccaagtcttatcccactaagtagggtcggctacatggatcaaatga 608388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 12890857 - 12890804
Alignment:
Q  108 acaacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaat 161  Q
    |||||||||||||| ||||||| |||||| |  ||||| |||||||||||||||    
T  12890857 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaat 12890804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 30789076 - 30789129
Alignment:
Q  110 aacaacaaccaaaccttatcacactaaatatggtcgactacatggatcaaatga 163  Q
    |||||||||||| ||||||| |||||| || | ||| |||||||||||||||||    
T  30789076 aacaacaaccaagccttatcccactaagtaggatcggctacatggatcaaatga 30789129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University