View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17825_low_7 (Length: 238)

Name: NF17825_low_7
Description: NF17825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17825_low_7
NF17825_low_7
[»] chr6 (46 HSPs)
chr6 (2-238)||(32292809-32293045)
chr6 (28-217)||(20896693-20896883)
chr6 (110-237)||(21312003-21312132)
chr6 (26-193)||(6330943-6331109)
chr6 (4-205)||(20126201-20126401)
chr6 (109-193)||(17027562-17027646)
chr6 (110-193)||(13492821-13492904)
chr6 (116-193)||(13191544-13191621)
chr6 (109-193)||(20850352-20850436)
chr6 (116-199)||(14771744-14771827)
chr6 (108-194)||(2720594-2720680)
chr6 (51-237)||(7912282-7912471)
chr6 (51-193)||(16519941-16520083)
chr6 (4-193)||(23986348-23986536)
chr6 (122-193)||(2681247-2681318)
chr6 (122-193)||(15929626-15929697)
chr6 (80-193)||(7911880-7911993)
chr6 (108-193)||(27334191-27334276)
chr6 (108-193)||(27394931-27395016)
chr6 (6-194)||(3652415-3652602)
chr6 (116-217)||(11062323-11062426)
chr6 (108-167)||(9440485-9440544)
chr6 (109-217)||(17851405-17851515)
chr6 (108-193)||(9440340-9440425)
chr6 (116-193)||(17205377-17205454)
chr6 (109-217)||(2890844-2890954)
chr6 (117-188)||(3885123-3885194)
chr6 (116-178)||(17731159-17731221)
chr6 (116-194)||(21311553-21311631)
chr6 (116-194)||(31821722-31821800)
chr6 (116-193)||(23776479-23776556)
chr6 (118-194)||(28065868-28065944)
chr6 (51-194)||(12194304-12194444)
chr6 (51-193)||(9352035-9352177)
chr6 (87-192)||(17850927-17851032)
chr6 (116-193)||(20732616-20732693)
chr6 (116-193)||(20735733-20735810)
chr6 (109-178)||(33775050-33775119)
chr6 (139-193)||(13492393-13492447)
chr6 (116-193)||(1991591-1991668)
chr6 (128-192)||(28583013-28583077)
chr6 (127-198)||(9440883-9440954)
chr6 (108-171)||(30729892-30729955)
chr6 (116-194)||(10964342-10964420)
chr6 (116-193)||(15929237-15929314)
chr6 (27-96)||(34660635-34660704)
[»] chr1 (41 HSPs)
chr1 (27-193)||(16907184-16907349)
chr1 (51-217)||(2328287-2328456)
chr1 (26-193)||(2634873-2635039)
chr1 (80-194)||(35760944-35761058)
chr1 (4-193)||(20054111-20054299)
chr1 (4-193)||(20054567-20054755)
chr1 (4-193)||(20055023-20055211)
chr1 (4-193)||(20055479-20055667)
chr1 (4-193)||(20055935-20056123)
chr1 (4-193)||(20056391-20056579)
chr1 (4-193)||(20057294-20057482)
chr1 (28-193)||(50002738-50002902)
chr1 (109-193)||(20057750-20057834)
chr1 (109-193)||(20845692-20845776)
chr1 (80-237)||(35759593-35759752)
chr1 (60-193)||(20061222-20061355)
chr1 (109-189)||(38340937-38341017)
chr1 (80-193)||(46693766-46693880)
chr1 (116-193)||(43057554-43057631)
chr1 (116-193)||(20056847-20056924)
chr1 (109-194)||(30872980-30873065)
chr1 (122-193)||(50002316-50002387)
chr1 (116-193)||(31822694-31822771)
chr1 (116-193)||(43057096-43057173)
chr1 (116-193)||(52250244-52250321)
chr1 (110-194)||(12883556-12883640)
chr1 (122-193)||(16451964-16452035)
chr1 (122-193)||(16461117-16461188)
chr1 (70-194)||(16440609-16440731)
chr1 (116-193)||(51372905-51372982)
chr1 (122-194)||(10820636-10820708)
chr1 (133-193)||(20060371-20060431)
chr1 (114-193)||(2634502-2634581)
chr1 (127-217)||(12728040-12728133)
chr1 (116-237)||(7548129-7548252)
chr1 (122-198)||(50003101-50003177)
chr1 (52-194)||(16410753-16410895)
chr1 (84-194)||(842963-843073)
chr1 (116-194)||(2739560-2739638)
chr1 (80-178)||(23180732-23180830)
chr1 (114-162)||(42317661-42317709)
[»] chr5 (39 HSPs)
chr5 (82-217)||(1821910-1822047)
chr5 (16-237)||(10927388-10927610)
chr5 (109-224)||(34867821-34867938)
chr5 (26-195)||(43356649-43356816)
chr5 (16-237)||(10926931-10927153)
chr5 (26-193)||(20039505-20039671)
chr5 (6-193)||(21886177-21886363)
chr5 (51-193)||(22556508-22556651)
chr5 (63-193)||(189053-189183)
chr5 (80-193)||(2473961-2474074)
chr5 (109-193)||(8642065-8642149)
chr5 (80-192)||(24182277-24182389)
chr5 (51-193)||(22556941-22557084)
chr5 (52-193)||(2474378-2474520)
chr5 (127-217)||(27646840-27646932)
chr5 (116-193)||(2193854-2193931)
chr5 (80-193)||(3886632-3886745)
chr5 (122-191)||(17445488-17445557)
chr5 (123-237)||(18750181-18750297)
chr5 (50-193)||(3887088-3887232)
chr5 (122-193)||(34371656-34371727)
chr5 (122-193)||(42788677-42788748)
chr5 (116-193)||(34372106-34372183)
chr5 (109-194)||(4658023-4658107)
chr5 (116-188)||(32574694-32574765)
chr5 (110-193)||(30719836-30719919)
chr5 (116-194)||(16370738-16370816)
chr5 (127-193)||(42429194-42429260)
chr5 (117-178)||(2058702-2058763)
chr5 (109-194)||(5066921-5067006)
chr5 (16-193)||(18304370-18304546)
chr5 (116-217)||(39146977-39147080)
chr5 (75-171)||(39801101-39801197)
chr5 (118-193)||(8391353-8391427)
chr5 (116-237)||(15512997-15513121)
chr5 (50-158)||(22975076-22975185)
chr5 (116-192)||(11160713-11160789)
chr5 (131-193)||(30684587-30684649)
chr5 (139-224)||(20858539-20858626)
[»] chr3 (43 HSPs)
chr3 (52-193)||(31284307-31284449)
chr3 (52-193)||(7477165-7477306)
chr3 (62-193)||(7493865-7493996)
chr3 (26-217)||(25230253-25230445)
chr3 (26-217)||(25237840-25238032)
chr3 (16-217)||(20885122-20885323)
chr3 (109-193)||(28561777-28561861)
chr3 (80-193)||(27187361-27187474)
chr3 (26-194)||(25230735-25230902)
chr3 (26-194)||(25238322-25238489)
chr3 (117-193)||(29224363-29224439)
chr3 (114-217)||(50347782-50347887)
chr3 (109-198)||(32386760-32386849)
chr3 (80-193)||(41472303-41472415)
chr3 (116-237)||(30529725-30529848)
chr3 (116-217)||(32796940-32797043)
chr3 (116-193)||(11180065-11180142)
chr3 (116-193)||(14813987-14814064)
chr3 (109-194)||(25248142-25248227)
chr3 (116-217)||(13150104-13150207)
chr3 (121-193)||(13150585-13150657)
chr3 (116-217)||(32227226-32227329)
chr3 (116-217)||(39640975-39641078)
chr3 (109-193)||(39653195-39653279)
chr3 (118-217)||(25238689-25238790)
chr3 (116-193)||(25802579-25802656)
chr3 (116-193)||(32227538-32227615)
chr3 (128-217)||(25239082-25239173)
chr3 (109-237)||(8067311-8067441)
chr3 (122-193)||(16811425-16811496)
chr3 (130-217)||(4067365-4067454)
chr3 (116-194)||(31103990-31104068)
chr3 (80-193)||(16810927-16811040)
chr3 (116-193)||(25803035-25803112)
chr3 (138-193)||(14820214-14820269)
chr3 (80-178)||(41473999-41474097)
chr3 (133-194)||(37045090-37045151)
chr3 (146-193)||(3899868-3899915)
chr3 (110-192)||(26310021-26310103)
chr3 (138-178)||(15392570-15392610)
chr3 (138-178)||(15405606-15405646)
chr3 (138-178)||(15411015-15411055)
chr3 (138-178)||(15417431-15417471)
[»] chr2 (37 HSPs)
chr2 (4-217)||(38898917-38899131)
chr2 (4-217)||(33174885-33175099)
chr2 (16-224)||(18098876-18099085)
chr2 (51-237)||(30966206-30966395)
chr2 (4-193)||(41754216-41754404)
chr2 (109-217)||(16378968-16379078)
chr2 (109-217)||(16379424-16379534)
chr2 (51-193)||(30966662-30966805)
chr2 (109-194)||(15619929-15620014)
chr2 (108-193)||(25338028-25338113)
chr2 (51-193)||(5399848-5399991)
chr2 (51-193)||(24818298-24818441)
chr2 (108-194)||(1953185-1953271)
chr2 (3-194)||(1706968-1707157)
chr2 (116-194)||(13191012-13191090)
chr2 (116-193)||(8256564-8256641)
chr2 (109-194)||(27882956-27883041)
chr2 (80-193)||(29259651-29259764)
chr2 (116-193)||(33771039-33771116)
chr2 (108-178)||(20502053-20502123)
chr2 (131-193)||(33174556-33174618)
chr2 (105-178)||(83044-83117)
chr2 (116-193)||(1912563-1912640)
chr2 (116-193)||(29804720-29804797)
chr2 (130-219)||(8073944-8074035)
chr2 (29-172)||(37552519-37552661)
chr2 (116-193)||(11388226-11388302)
chr2 (116-193)||(11394573-11394649)
chr2 (125-194)||(15639781-15639850)
chr2 (125-194)||(30963293-30963362)
chr2 (109-192)||(30963752-30963835)
chr2 (26-192)||(25434088-25434253)
chr2 (129-178)||(8181397-8181446)
chr2 (116-188)||(18447954-18448026)
chr2 (129-194)||(36924452-36924519)
chr2 (127-178)||(16542034-16542085)
chr2 (116-194)||(9909130-9909208)
[»] chr8 (40 HSPs)
chr8 (62-237)||(25147520-25147697)
chr8 (26-193)||(22026328-22026494)
chr8 (28-194)||(15567586-15567751)
chr8 (4-193)||(10844810-10844998)
chr8 (16-193)||(27925838-27926014)
chr8 (108-193)||(41659136-41659221)
chr8 (109-193)||(28375085-28375169)
chr8 (110-193)||(22549026-22549109)
chr8 (51-193)||(25144744-25144887)
chr8 (116-215)||(3744676-3744777)
chr8 (80-194)||(6464940-6465054)
chr8 (111-193)||(27819277-27819359)
chr8 (116-193)||(27021910-27021987)
chr8 (116-193)||(34308510-34308587)
chr8 (110-193)||(22548580-22548663)
chr8 (110-193)||(30334939-30335022)
chr8 (105-224)||(1297034-1297155)
chr8 (116-194)||(2044096-2044174)
chr8 (111-193)||(10844646-10844728)
chr8 (87-193)||(17103090-17103196)
chr8 (116-194)||(22840559-22840637)
chr8 (116-193)||(27022369-27022446)
chr8 (109-194)||(32292428-32292513)
chr8 (51-171)||(34308992-34309113)
chr8 (111-216)||(41913003-41913110)
chr8 (109-217)||(21316114-21316224)
chr8 (27-188)||(6466661-6466820)
chr8 (116-193)||(12100729-12100806)
chr8 (116-193)||(12827285-12827362)
chr8 (109-194)||(33852288-33852373)
chr8 (122-194)||(3745145-3745217)
chr8 (116-194)||(8080372-8080450)
chr8 (116-188)||(22705210-22705282)
chr8 (108-192)||(28453368-28453452)
chr8 (80-178)||(17429503-17429600)
chr8 (51-193)||(25147939-25148082)
chr8 (28-194)||(15568035-15568199)
chr8 (118-215)||(15819022-15819121)
chr8 (116-171)||(29971454-29971509)
chr8 (116-193)||(30527513-30527589)
[»] chr7 (47 HSPs)
chr7 (51-193)||(9124931-9125074)
chr7 (51-193)||(25182334-25182476)
chr7 (26-194)||(6747628-6747795)
chr7 (51-193)||(13125167-13125310)
chr7 (51-217)||(42515064-42515233)
chr7 (109-190)||(2193287-2193368)
chr7 (51-168)||(13124757-13124875)
chr7 (39-193)||(42515506-42515659)
chr7 (116-193)||(2941788-2941865)
chr7 (109-193)||(26421791-26421875)
chr7 (122-193)||(2189188-2189259)
chr7 (116-224)||(2611650-2611760)
chr7 (51-193)||(11517420-11517562)
chr7 (4-179)||(26957602-26957776)
chr7 (27-193)||(31743855-31744021)
chr7 (26-171)||(2489987-2490132)
chr7 (116-193)||(6719105-6719182)
chr7 (80-193)||(28495856-28495969)
chr7 (117-194)||(29039050-29039127)
chr7 (108-193)||(29357487-29357572)
chr7 (87-217)||(35474126-35474258)
chr7 (116-193)||(36422290-36422367)
chr7 (122-193)||(2465777-2465848)
chr7 (116-193)||(2465962-2466039)
chr7 (116-193)||(34405622-34405699)
chr7 (116-193)||(46425779-46425856)
chr7 (127-206)||(22529253-22529332)
chr7 (110-193)||(36015442-36015525)
chr7 (116-194)||(5406618-5406696)
chr7 (108-198)||(35527147-35527237)
chr7 (28-178)||(6585566-6585708)
chr7 (128-177)||(11372501-11372550)
chr7 (26-159)||(33316676-33316809)
chr7 (123-193)||(18833331-18833401)
chr7 (127-217)||(679866-679957)
chr7 (109-194)||(37672191-37672276)
chr7 (116-193)||(43233451-43233528)
chr7 (127-194)||(16192368-16192435)
chr7 (116-162)||(3305374-3305420)
chr7 (110-192)||(9623240-9623322)
chr7 (116-178)||(11372937-11372999)
chr7 (116-170)||(16811900-16811954)
chr7 (116-178)||(20966089-20966151)
chr7 (87-193)||(28495639-28495745)
chr7 (77-185)||(37671796-37671903)
chr7 (122-193)||(31406615-31406686)
chr7 (128-178)||(26421351-26421401)
[»] chr4 (59 HSPs)
chr4 (4-198)||(9423878-9424071)
chr4 (4-217)||(1645748-1645962)
chr4 (4-237)||(50398517-50398751)
chr4 (51-193)||(23350308-23350451)
chr4 (111-193)||(31817877-31817959)
chr4 (27-193)||(50399018-50399183)
chr4 (4-193)||(12692024-12692212)
chr4 (80-193)||(44471350-44471463)
chr4 (110-193)||(8467825-8467908)
chr4 (26-237)||(3169155-3169367)
chr4 (108-193)||(31817423-31817508)
chr4 (80-193)||(51331306-51331419)
chr4 (26-194)||(14351744-14351911)
chr4 (127-217)||(23942788-23942880)
chr4 (118-193)||(4127914-4127989)
chr4 (122-193)||(49998680-49998751)
chr4 (4-178)||(17029257-17029430)
chr4 (127-193)||(17628560-17628626)
chr4 (109-224)||(33764891-33765008)
chr4 (116-190)||(44470902-44470976)
chr4 (128-205)||(21220344-21220421)
chr4 (116-193)||(24629458-24629535)
chr4 (116-192)||(14572176-14572252)
chr4 (48-196)||(17628938-17629086)
chr4 (108-192)||(21067312-21067396)
chr4 (109-185)||(21067765-21067841)
chr4 (117-217)||(53996114-53996216)
chr4 (127-193)||(7678647-7678713)
chr4 (116-198)||(14571741-14571823)
chr4 (116-178)||(29628707-29628769)
chr4 (116-193)||(4127462-4127539)
chr4 (16-193)||(27026443-27026618)
chr4 (26-178)||(17028823-17028974)
chr4 (51-178)||(35871600-35871728)
chr4 (116-198)||(24628997-24629082)
chr4 (87-194)||(45682212-45682319)
chr4 (16-194)||(4185653-4185831)
chr4 (124-194)||(23976243-23976313)
chr4 (62-200)||(41869902-41870040)
chr4 (116-193)||(1464185-1464262)
chr4 (127-217)||(23943241-23943333)
chr4 (109-194)||(43928987-43929072)
chr4 (27-178)||(24271590-24271743)
chr4 (119-193)||(27578482-27578556)
chr4 (118-193)||(27029317-27029392)
chr4 (116-167)||(53854858-53854909)
chr4 (110-192)||(13613923-13614005)
chr4 (111-177)||(17506418-17506484)
chr4 (138-188)||(20306191-20306241)
chr4 (116-198)||(27578929-27579011)
chr4 (80-193)||(13266088-13266201)
chr4 (144-193)||(50814850-50814899)
chr4 (116-185)||(53391925-53391994)
chr4 (116-188)||(42838661-42838733)
chr4 (16-192)||(26200311-26200489)
chr4 (105-163)||(17505958-17506016)
chr4 (27-125)||(33987164-33987261)
chr4 (116-178)||(44831035-44831097)
chr4 (109-165)||(2499647-2499703)
[»] scaffold0499 (1 HSPs)
scaffold0499 (109-193)||(2082-2166)
[»] scaffold0322 (1 HSPs)
scaffold0322 (109-193)||(18997-19081)
[»] scaffold0088 (1 HSPs)
scaffold0088 (109-190)||(23704-23785)
[»] scaffold0024 (1 HSPs)
scaffold0024 (53-193)||(105694-105835)
[»] scaffold0040 (1 HSPs)
scaffold0040 (109-193)||(2241-2325)
[»] scaffold0018 (1 HSPs)
scaffold0018 (51-193)||(10272-10415)
[»] scaffold0243 (1 HSPs)
scaffold0243 (111-193)||(1253-1335)
[»] scaffold0007 (1 HSPs)
scaffold0007 (51-194)||(142304-142448)
[»] scaffold0333 (2 HSPs)
scaffold0333 (111-193)||(4594-4676)
scaffold0333 (111-193)||(5049-5136)
[»] scaffold0664 (1 HSPs)
scaffold0664 (109-194)||(4012-4097)
[»] scaffold0022 (2 HSPs)
scaffold0022 (116-193)||(162709-162786)
scaffold0022 (111-177)||(69862-69928)
[»] scaffold0020 (1 HSPs)
scaffold0020 (116-193)||(107494-107571)
[»] scaffold0005 (2 HSPs)
scaffold0005 (116-192)||(245124-245200)
scaffold0005 (116-198)||(245553-245635)
[»] scaffold0002 (1 HSPs)
scaffold0002 (116-217)||(154795-154898)
[»] scaffold0168 (1 HSPs)
scaffold0168 (116-193)||(2780-2857)
[»] scaffold0557 (1 HSPs)
scaffold0557 (127-194)||(2154-2221)
[»] scaffold0047 (2 HSPs)
scaffold0047 (116-194)||(17628-17706)
scaffold0047 (116-193)||(18165-18242)
[»] scaffold0391 (1 HSPs)
scaffold0391 (107-193)||(14770-14856)
[»] scaffold0101 (1 HSPs)
scaffold0101 (80-178)||(45389-45486)
[»] scaffold0036 (2 HSPs)
scaffold0036 (30-217)||(26022-26211)
scaffold0036 (116-177)||(16074-16135)
[»] scaffold1126 (1 HSPs)
scaffold1126 (16-159)||(981-1123)
[»] scaffold0071 (1 HSPs)
scaffold0071 (138-178)||(44767-44807)


Alignment Details
Target: chr6 (Bit Score: 205; Significance: 1e-112; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 2 - 238
Target Start/End: Original strand, 32292809 - 32293045
Alignment:
Q  2 gaacgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatc 101  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32292809 gaacgaaggcggatagtgatcgttggtgcacaagacatgacaatgagcagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatc 32292908  T
Q  102 tttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaaca 201  Q
     |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  32292909 cttagatcgtgcaggtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaaaatacatcttgtttttagtaaca 32293008  T
Q  202 cattataagaactccatacttaaacgaacttgacttt 238  Q
    |||||||||||||||||| |||| |||||||||||||    
T  32293009 cattataagaactccatagttaagcgaacttgacttt 32293045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 28 - 217
Target Start/End: Complemental strand, 20896883 - 20896693
Alignment:
Q  28 tgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgc 127  Q
    |||||||| ||||||||||||  ||||| | || ||||||| ||| || ||| ||||| ||||||||||  ||| ||||  |||| | |||||||||| |    
T  20896883 tgcacaaggcatgacaatgagcggctcccgacaacttctagacaagccgaat-cacatcggaatgagagggatccttaggccgtgtaggtatgagactac 20896785  T
Q  128 atggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactcca 217  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||| || ||||||||||| |||| | ||||  ||||||||||||    
T  20896784 atggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagtagctcattccataagaactcca 20896693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 21312003 - 21312132
Alignment:
Q  110 gtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--at 207  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||| || |||||||||||| ||| | ||||  ||    
T  21312003 gtgcaggtatgagactgcatggttgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatcttctttttggtagcccatttcat 21312102  T
Q  208 aagaactccatacttaaacgaacttgactt 237  Q
    ||||| |||||| |||||||  ||||||||    
T  21312103 aagaaatccatagttaaacgtgcttgactt 21312132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 193
Target Start/End: Complemental strand, 6331109 - 6330943
Alignment:
Q  26 ggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagact 125  Q
    |||||||||| ||||||||||||  ||||| | || ||||||| ||| || ||| ||||| |||||||||   ||| | ||  |||| | ||||||||||    
T  6331109 ggtgcacaaggcatgacaatgagcggctcccgacaacttctagacaagccgaat-cacatcggaatgagatggatcctgaggccgtgtaggtatgagact 6331011  T
Q  126 gcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
     |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  6331010 acatggttgaaggaagacttataagaattgtttggtactacctatatcaacaatatgcatcttctttt 6330943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 205
Target Start/End: Complemental strand, 20126401 - 20126201
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    ||||||||||  |||| |||  |||||||||| ||||||||||||  ||||||| || ||||||| ||| |  ||| ||||| ||||||||||  ||| |    
T  20126401 acgagggcggggagtggtcgccggtgcacaaggcatgacaatgagcggctcctgacaacttctagacaagctgaat-cacatcggaatgagagggatcct 20126303  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacaca 203  Q
     ||   ||| | |||||||||| |||||||||| |||||||||||||||| ||||| ||||||||||| |||||| || |||||||||||| ||| ||||    
T  20126302 aaggctgtgtaggtatgagactacatggttgaaggaaggcttataagaatggtttgatactacctatatcaacaagatgcatcttctttttggtagcaca 20126203  T
Q  204 tt 205  Q
    ||    
T  20126202 tt 20126201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 17027646 - 17027562
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  17027646 cgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagattcatcttctttt 17027562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 193
Target Start/End: Original strand, 13492821 - 13492904
Alignment:
Q  110 gtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||| || |||||||||||    
T  13492821 gtgcaggtatgagactgcatggttgaaggaaggcttataataattgtttggtactacctatatcaacaagatgcatcttctttt 13492904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 13191621 - 13191544
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  13191621 gtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 13191544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 20850352 - 20850436
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||| ||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||| || |||||||||||    
T  20850352 cgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgttttgtactacctatatcaacaagatgcatcttctttt 20850436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 14771827 - 14771744
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaa 199  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| || ||| |||||||| ||||    
T  14771827 gtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatccatattctttttggtaa 14771744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 2720680 - 2720594
Alignment:
Q  108 tcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    ||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||  ||||| | ||||||| |||||    
T  2720680 tcgtgcaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatattaacaagacacatctttttttt 2720594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 237
Target Start/End: Original strand, 7912282 - 7912471
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| |||||||| ||| |  | |||||| ||||||||||  ||||  ||  |||||| ||||| ||||||||||||||| |||  ||||||     
T  7912282 gctcctggcatgcttctaggaaaaactgaatcacatcggaatgagagggatctcgaggccgtgcaggtatgggactgcatggttgaaggaaaacttatat 7912381  T
Q  150 gaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactccatacttaaacgaacttgactt 237  Q
    |||||||||||||||||||||| |||||| || ||| |||||||  ||| | ||||  |||||||||||||| |||||||  ||||||||    
T  7912382 gaattgtttggtactacctatatcaacaagatgcattttcttttcggtagctcattccataagaactccatagttaaacgtgcttgactt 7912471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 16519941 - 16520083
Alignment:
Q  51 gctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataag 150  Q
    |||||||||| |||||||||||| || | |||||| ||||||||||  ||| | ||   ||| | |||||||||| |||||| ||| |||||||||| ||    
T  16519941 gctcctggcagcttctaggcaaaacagaatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggtcgaaggaaggcttatgag 16520040  T
Q  151 aattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    | ||||||||||||||||||| |||||| || |||||||||||    
T  16520041 atttgtttggtactacctatatcaacaagatgcatcttctttt 16520083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 193
Target Start/End: Complemental strand, 23986536 - 23986348
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    ||||||||||  |||| |||| |||||||||| ||||||||||||  ||||| | || |||||||   |||| ||| ||||| ||||||||||  |||      
T  23986536 acgagggcggggagtggtcgtcggtgcacaaggcatgacaatgagcggctcccgacagcttctagaggaaccgaat-cacatcggaatgagagggatccg 23986438  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
     ||  |||| | ||||| |||| |||||||||| | ||||||||||||||||||||||||||||||||  ||||| || |||||||||||    
T  23986437 gaggccgtgtaggtatgggactacatggttgaaggtaggcttataagaattgtttggtactacctatatgaacaagatgcatcttctttt 23986348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 2681318 - 2681247
Alignment:
Q  122 gactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||| |||||| || |||||||||||    
T  2681318 gactgcatggttgaatgaagacttataagaattgtttggtactacccatatcaacaagatgcatcttctttt 2681247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 15929626 - 15929697
Alignment:
Q  122 gactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||| |||||| || |||||||||||    
T  15929626 gactacatggttgaatgaaggcttataagaattatttggtactacctatatcaacaaaatgcatcttctttt 15929697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 80 - 193
Target Start/End: Original strand, 7911880 - 7911993
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaat 179  Q
    |||||| ||||||||||  ||||  ||  |||||| ||||  ||||||||||||||| |||  ||||||||||||||||||||||||||||| ||||||     
T  7911880 tcacatcggaatgagagggatctcgaggccgtgcaggtataggactgcatggttgaaggaaaacttataagaattgtttggtactacctatatcaacaag 7911979  T
Q  180 atacatcttctttt 193  Q
    || |||||||||||    
T  7911980 atgcatcttctttt 7911993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 27334191 - 27334276
Alignment:
Q  108 tcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||| |||||  |||||||||||||| ||| |||||||||||||||||||||||||||||| |||||| ||  ||||||||||    
T  27334191 tcgtgcaggtatggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttctttt 27334276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 27394931 - 27395016
Alignment:
Q  108 tcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||| |||||  |||||||||||||| ||| |||||||||||||||||||||||||||||| |||||| ||  ||||||||||    
T  27394931 tcgtgcaggtatggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgaatcttctttt 27395016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 194
Target Start/End: Original strand, 3652415 - 3652602
Alignment:
Q  6 gagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatcttta 105  Q
    ||||||||  |||| |||| |||||||||| || |||||||||  ||||| | || |||||||   |||| ||| ||||| ||||||||||  ||| | |    
T  3652415 gagggcggggagtggtcgtcggtgcacaaggcacgacaatgagcggctcccgacagcttctagaggaaccgaat-cacatcggaatgagagggatcctga 3652513  T
Q  106 gatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |   ||| | ||||| |||| |||||||||| ||||||||||||||||||| || ||||||||||| |||||| || ||||||||||||    
T  3652514 ggctgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtctgatactacctatatcaacaagatgcatcttcttttt 3652602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 11062323 - 11062426
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaac 213  Q
    |||||| ||| |||||||||| ||||||||||||||| ||||| |||||||||||| |||||| || |||||||||||| ||| | ||||  ||||||||    
T  11062323 gtatgaaactacatggttgaaggaaggcttataagaagtgttttgtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaac 11062422  T
Q  214 tcca 217  Q
    ||||    
T  11062423 tcca 11062426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 167
Target Start/End: Complemental strand, 9440544 - 9440485
Alignment:
Q  108 tcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacc 167  Q
    ||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  9440544 tcgtgcaggtatgggacttcatggttgaatgaaggcttataagaattgtttggtactacc 9440485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 217
Target Start/End: Original strand, 17851405 - 17851515
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacat--ta 206  Q
    |||||| ||||| |||||||||||| || ||||||||||||||  ||||||||||||||| || |||||| || |||||||||||| ||| | |||  ||    
T  17851405 cgtgcaagtatgggactgcatggttaaaagaaggcttataagatatgtttggtactacctttatcaacaagatgcatcttctttttggtagcccattcta 17851504  T
Q  207 taagaactcca 217  Q
    |||||||||||    
T  17851505 taagaactcca 17851515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 9440425 - 9440340
Alignment:
Q  108 tcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||| |||||  |||||||||||||||||| |||||||||||||||| |||||||| |||| |||||| || ||| |||||||    
T  9440425 tcgtgcaggtatggaactgcatggttgaatgaaagcttataagaattgttcggtactacttatatcaacaagatgcattttctttt 9440340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 17205377 - 17205454
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||| |||||||| ||||||||||  ||||||||||||||||||||||||| ||||||||| || |||||| ||||    
T  17205377 gtatgaaactgcatgattgaatgaagaattataagaattgtttggtactacctttaccaacaagattcatcttgtttt 17205454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 2890954 - 2890844
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--a 206  Q
    |||||| ||||| ||||||||||||||| ||||| |||||||||||||| || |||||||||| ||| || || | ||||||||| |||| | ||||  |    
T  2890954 cgtgcaggtatgggactgcatggttgaaggaaggtttataagaattgttagggactacctatatcaaaaagatgcttcttcttttcagtagcccattcca 2890855  T
Q  207 taagaactcca 217  Q
    |||||||||||    
T  2890854 taagaactcca 2890844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 3885194 - 3885123
Alignment:
Q  117 tatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatctt 188  Q
    ||||||||||||| |||||| ||| ||||| ||||||||||||||||||| ||||| ||||| |||||||||    
T  3885194 tatgagactgcatagttgaaggaatgcttaaaagaattgtttggtactacatatactaacaaaatacatctt 3885123  T

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Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 17731221 - 17731159
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    ||||| |||||||||||| || |||| ||||||||||||||||||||||||||||| ||||||    
T  17731221 gtatgggactgcatggttaaaggaagacttataagaattgtttggtactacctatatcaacaa 17731159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 21311553 - 21311631
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    ||||| ||||||||||||||| |||| |||||||||||||||||||| |||||| |  ||||| || ||||||||||||    
T  21311553 gtatgggactgcatggttgaaggaagccttataagaattgtttggtattacctagataaacaagatccatcttcttttt 21311631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 31821800 - 31821722
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||||||||| |||||||||| ||| ||||||||||||| |||||||||| ||||| |||||| || |||||| |||||    
T  31821800 gtatgagactacatggttgaaggaatgcttataagaattatttggtactaactatatcaacaagatgcatctttttttt 31821722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 23776479 - 23776556
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| |||||||||| |||| ||||||||||| || |||||||||||||| |||||| || |||||||||||    
T  23776479 gtatgggactacatggttgaaggaagacttataagaatcgtctggtactacctatatcaacaagatgcatcttctttt 23776556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 28065944 - 28065868
Alignment:
Q  118 atgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    ||||||||| ||| ||||||||| |||||||||||||||||||||||| || || |||||| || |||||| |||||    
T  28065944 atgagactgtatgattgaatgaaagcttataagaattgtttggtactatctctatcaacaagatgcatctttttttt 28065868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 194
Target Start/End: Original strand, 12194304 - 12194444
Alignment:
Q  51 gctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataag 150  Q
    ||||||| |||||||||| |||||| ||| |||||||||||||||| |||| | ||| ||||||  ||||| |||||||| |||||  ||| |||||||     
T  12194304 gctcctgacatcttctagtcaaaccgaat-cacattggaatgagaggaatcctgagaccgtgcagatatga-actgcatgattgaagaaagacttataa- 12194400  T
Q  151 aattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    | || ||||| |||| ||||| |||||| || ||||||||||||    
T  12194401 atttttttggcactatctatatcaacaagatgcatcttcttttt 12194444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 9352035 - 9352177
Alignment:
Q  51 gctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataag 150  Q
    |||||||||| |||||||||||| || | |||||| | ||||||||  ||| | ||   ||| | |||||||||| |||||| ||| | || |||||||     
T  9352035 gctcctggcagcttctaggcaaaacataatcacatcgaaatgagagggatcctgaggctgtgtaggtatgagactacatggtcgaagggagacttataat 9352134  T
Q  151 aattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    | |||||||||||||||||||  ||||| || |||||||||||    
T  9352135 atttgtttggtactacctatataaacaagatgcatcttctttt 9352177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 192
Target Start/End: Original strand, 17850927 - 17851032
Alignment:
Q  87 ggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatc 186  Q
    ||||||||||  ||| | || ||||||| ||||| |||||||||||| || ||| ||| ||||||  ||||||||||||||| || |||||| || ||||    
T  17850927 ggaatgagagggatcctgaggtcgtgcaagtatgggactgcatggttaaaagaatgctgataagatatgtttggtactacctttatcaacaagatgcatc 17851026  T
Q  187 ttcttt 192  Q
    ||||||    
T  17851027 ttcttt 17851032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 20732616 - 20732693
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| |||||||| | ||||||||||||||||| ||||||||||||||||  || ||||| ||| |||||||    
T  20732616 gtatgtgactacatggttgtaggaaggcttataagaattatttggtactacctatattaataatatgcatattctttt 20732693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 20735733 - 20735810
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| |||| ||| | |||||||||||||||||||||| |||||| |||| |||||| || |||||||||||    
T  20735733 gtatgtgactacatgattgtaggaaggcttataagaattgtttgatactacttatatcaacaagatgcatcttctttt 20735810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 178
Target Start/End: Complemental strand, 33775119 - 33775050
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    |||||| ||||| ||| ||||||||||| ||||| ||||||||||||| |||| ||||||||| ||||||    
T  33775119 cgtgcaagtatgtgaccgcatggttgaaggaaggattataagaattgtctggtgctacctatatcaacaa 33775050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 13492393 - 13492447
Alignment:
Q  139 aaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||||||||||||||| || |||||||| |||||| || |||||||||||    
T  13492393 aaggcttataagaattgtttgatattacctatatcaacaagatgcatcttctttt 13492447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 1991591 - 1991668
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||| |||||||| | ||||||||| ||||||||||||||| ||| |||   ||||| || |||||||||||    
T  1991591 gtatgagactacatggttggaagaaggcttacaagaattgtttggtattacatatctaaacaagatgcatcttctttt 1991668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 28583013 - 28583077
Alignment:
Q  128 atggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttt 192  Q
    ||||||||||||||||||||||||||| |||| ||| | ||||| |||||| || |||| |||||    
T  28583013 atggttgaatgaaggcttataagaattatttgatacgatctatatcaacaagatgcatcatcttt 28583077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 198
Target Start/End: Complemental strand, 9440954 - 9440883
Alignment:
Q  127 catggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagta 198  Q
    |||||||||| ||| ||||||||||||| ||||||||||| | || |||||| || ||| ||||||| ||||    
T  9440954 catggttgaaggaatgcttataagaattctttggtactacttttatcaacaagatgcattttcttttcagta 9440883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 30729955 - 30729892
Alignment:
Q  108 tcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctata 171  Q
    ||||||| ||||||||| ||||||||||| || | || |||| |||||||||||||||| ||||    
T  30729955 tcgtgcaagtatgagacagcatggttgaaggaggactcataaaaattgtttggtactacgtata 30729892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 10964342 - 10964420
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    ||||||||||| ||||| |||  ||| |||| ||||||||||||||||||| |||| ||| || ||| || ||||||||    
T  10964342 gtatgagactgtatggtagaagaaagacttacaagaattgtttggtactacatatatcaataaaataaatattcttttt 10964420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 15929237 - 15929314
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||| || |||||||  || ||||||||||||||||||||| | |||||| ||| || || ||| |||||||    
T  15929237 gtatgagactacaaggttgaagaaaagcttataagaattgtttggtaatgcctatatcaataagatgcatattctttt 15929314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 34660704 - 34660635
Alignment:
Q  27 gtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagag 96  Q
    |||||||||||| |||||||||  |||| |  || ||||||||  ||||||||||||||| |||||||||    
T  34660704 gtgcacaagacaggacaatgagtggctcttctcagcttctaggtgaaccaaattcacattagaatgagag 34660635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 27 - 193
Target Start/End: Original strand, 16907184 - 16907349
Alignment:
Q  27 gtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactg 126  Q
    ||||||||||||||||||| ||  |||||||||| |||||||||||||||||| || ||   ||||||||  || || |||  ||||| |||||| ||||    
T  16907184 gtgcacaagacatgacaatcagcggctcctggcagcttctaggcaaaccaaat-catatcaaaatgagagggattttgagactgtgcaggtatgaaactg 16907282  T
Q  127 catggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  16907283 catggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatacatcttctttt 16907349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 217
Target Start/End: Original strand, 2328287 - 2328456
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| ||| |||||||| |  | |||||||||||||||||||||  | ||  ||| || ||||| ||||||||||||||| ||||||||||||    
T  2328287 gctcctggcatgcttttaggcaaaactgaatcacattggaatgagagaaattatgaggccgtacaggtatgggactgcatggttgaaggaaggcttataa 2328386  T
Q  150 gaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactcca 217  Q
    ||||||||||||||||||||||  ||||| || |||||||||||| ||| ||||||  ||||||||||||    
T  2328387 gaattgtttggtactacctatattaacaagatgcatcttctttttggtagcacattccataagaactcca 2328456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 193
Target Start/End: Original strand, 2634873 - 2635039
Alignment:
Q  26 ggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagact 125  Q
    |||||||||| |||||||||| |  |||||| ||| |||||||||||| | ||| ||||| ||||||||||  ||| | || | ||||| ||||| ||||    
T  2634873 ggtgcacaaggcatgacaatgtgtggctcctagcaacttctaggcaaatcgaat-cacatcggaatgagagggatcatgaggttgtgcaggtatgggact 2634971  T
Q  126 gcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||||| ||   || ||||||||||||||||||||||||||||||||| || |||||||||||    
T  2634972 gcatggttgaaggataactcataagaattgtttggtactacctataccaacaagatgcatcttctttt 2635039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 35761058 - 35760944
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaat 179  Q
    |||||| ||||||||||  ||| | ||  |||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||     
T  35761058 tcacatcggaatgagagggatcctgaggccgtgcaggtatgagactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaag 35760959  T
Q  180 atacatcttcttttt 194  Q
    || ||||||||||||    
T  35760958 atgcatcttcttttt 35760944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 193
Target Start/End: Complemental strand, 20054299 - 20054111
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    ||||||||||  |||| |||  |||||||||| || |||||||||  ||||||| || |||||||   |||| ||| ||||  ||||||||||   || |    
T  20054299 acgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaat-cacaccggaatgagagggttcct 20054201  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
     ||  |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  20054200 gaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 20054111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 193
Target Start/End: Complemental strand, 20054755 - 20054567
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    ||||||||||  |||| |||  |||||||||| || |||||||||  ||||||| || |||||||   |||| ||| ||||  ||||||||||   || |    
T  20054755 acgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaat-cacaccggaatgagagggttcct 20054657  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
     ||  |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  20054656 gaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 20054567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 193
Target Start/End: Complemental strand, 20055211 - 20055023
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    ||||||||||  |||| |||  |||||||||| || |||||||||  ||||||| || |||||||   |||| ||| ||||  ||||||||||   || |    
T  20055211 acgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaat-cacaccggaatgagagggttcct 20055113  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
     ||  |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  20055112 gaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 20055023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 193
Target Start/End: Complemental strand, 20055667 - 20055479
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    ||||||||||  |||| |||  |||||||||| || |||||||||  ||||||| || |||||||   |||| ||| ||||  ||||||||||   || |    
T  20055667 acgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaat-cacaccggaatgagagggttcct 20055569  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
     ||  |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  20055568 gaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 20055479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 193
Target Start/End: Complemental strand, 20056123 - 20055935
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    ||||||||||  |||| |||  |||||||||| || |||||||||  ||||||| || |||||||   |||| ||| ||||  ||||||||||   || |    
T  20056123 acgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaat-cacaccggaatgagagggttcct 20056025  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
     ||  |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  20056024 gaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 20055935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 193
Target Start/End: Complemental strand, 20056579 - 20056391
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    ||||||||||  |||| |||  |||||||||| || |||||||||  ||||||| || |||||||   |||| ||| ||||  ||||||||||   || |    
T  20056579 acgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaat-cacaccggaatgagagggttcct 20056481  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
     ||  |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  20056480 gaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 20056391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 193
Target Start/End: Complemental strand, 20057482 - 20057294
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    ||||||||||  |||| |||  |||||||||| || |||||||||  ||||||| || |||||||   |||| ||| ||||  ||||||||||   || |    
T  20057482 acgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaat-cacaccggaatgagagggttcct 20057384  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
     ||  |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  20057383 gaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 20057294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 28 - 193
Target Start/End: Complemental strand, 50002902 - 50002738
Alignment:
Q  28 tgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgc 127  Q
    |||||||| ||||||||||||  ||||| | ||||||||||   | || ||| ||||| ||||||||||| ||| | ||  |||| | | ||| ||||||    
T  50002902 tgcacaaggcatgacaatgagcggctcccgacatcttctagaggagccgaat-cacatcggaatgagagagatcctgaggccgtgtaggcatgggactgc 50002804  T
Q  128 atggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  50002803 atggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 50002738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 20057834 - 20057750
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  20057834 cgtgcaggtatgggactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 20057750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 20845776 - 20845692
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| || |||||||||||    
T  20845776 cgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttgttactacctatatcaacaagatgcatcttctttt 20845692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 80 - 237
Target Start/End: Complemental strand, 35759752 - 35759593
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaat 179  Q
    |||||| ||||||||||  ||| | ||  |||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||     
T  35759752 tcacatcggaatgagagggatcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaag 35759653  T
Q  180 atacatcttctttttagtaacacatt--ataagaactccatacttaaacgaacttgactt 237  Q
    || |||||||||||  ||| | ||||  ||||||||| |||| |||||||  ||||||||    
T  35759652 atgcatcttcttttcggtagctcattccataagaacttcatagttaaacgtgcttgactt 35759593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 193
Target Start/End: Complemental strand, 20061355 - 20061222
Alignment:
Q  60 atcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttg 159  Q
    ||||||||||| || |  | ||||||  |||||||||  ||| | || ||||||| ||||| ||||||||||||||| ||| ||||||||||||||||||    
T  20061355 atcttctaggctaaactgaatcacatcagaatgagagggatcctgaggtcgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttg 20061256  T
Q  160 gtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||| |||||| || |||||||||||    
T  20061255 gtactacctatatcaacaagatgcatcttctttt 20061222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 38340937 - 38341017
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttc 189  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||    
T  38340937 cgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 38341017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 193
Target Start/End: Complemental strand, 46693880 - 46693766
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgc-atggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    |||||| ||||||||||  ||| | || ||||||||||||| |||||  ||||||||| |||||||||||| ||||||||||||||||||||| ||||||    
T  46693880 tcacatcggaatgagagggatcctaaggtcgtgcatgtatgggactgtgatggttgaaggaaggcttataaaaattgtttggtactacctatatcaacaa 46693781  T
Q  179 tatacatcttctttt 193  Q
     || |||||||||||    
T  46693780 gatgcatcttctttt 46693766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 43057631 - 43057554
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||  ||||| || |||||||||||    
T  43057631 gtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttctttt 43057554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 20056924 - 20056847
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| ||||||| ||||||| |||||||||| ||||||||||||||||||||||| |||||| || |||||||||||    
T  20056924 gtatgggactgcagggttgaaggaaggcttatgagaattgtttggtactacctatatcaacaagatgcatcttctttt 20056847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 109 - 194
Target Start/End: Complemental strand, 30873065 - 30872980
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||||| ||||||||||| ||||||||| |||| ||| ||||||||||||| ||||||||||| |||||| || ||||||||||||    
T  30873065 cgtgcaggtatgagactgtatggttgaaggaagacttttaagaattgtttgatactacctatatcaacaagatgcatcttcttttt 30872980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 50002387 - 50002316
Alignment:
Q  122 gactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||| || |||||| || |||||||||||    
T  50002387 gactacatggttgaaggaaggcttataagaattgtttggtactacctttatcaacaagatgcatcttctttt 50002316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 31822771 - 31822694
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||| |||||||||| ||||  ||||||||||| ||||||||||| |||| ||||||||| |||||||||||    
T  31822771 gtatgagactacatggttgaaggaagatttataagaattatttggtactacatatatcaacaatatgcatcttctttt 31822694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 43057173 - 43057096
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| |||||||||| ||||||||| |||||||||||| ||||||||||| |||||| || |||||||||||    
T  43057173 gtatgtgactacatggttgaaggaaggcttagaagaattgtttgatactacctatatcaacaagatgcatcttctttt 43057096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 52250244 - 52250321
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| |||||| ||| |||||||||||||||||||| ||||||||||||| |||||| || |||||||||||    
T  52250244 gtatgggactacatggtcgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctttt 52250321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 12883556 - 12883640
Alignment:
Q  110 gtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    ||||| ||||| ||||||||| ||||| |||  ||||||||||||||||||||||||||||| |||||| || ||| ||||||||    
T  12883556 gtgcaggtatgggactgcatgattgaaggaatacttataagaattgtttggtactacctatatcaacaagatgcattttcttttt 12883640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 16452035 - 16451964
Alignment:
Q  122 gactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||| |||||||||| ||| |||||||||||||||| ||||||||||||| |||||| || |||||||||||    
T  16452035 gactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatcttctttt 16451964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 16461188 - 16461117
Alignment:
Q  122 gactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||| |||||||||| ||| |||||||||||||||| ||||||||||||| |||||| || |||||||||||    
T  16461188 gactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaacaagatgcatcttctttt 16461117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 194
Target Start/End: Complemental strand, 16440731 - 16440609
Alignment:
Q  70 caaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactaccta 169  Q
    ||||||||||||||||   ||||||||||||||| |||||||  | ||||| || | ||||||||||  ||| |||||||||| |||||| ||||||| |    
T  16440731 caaaccaaattcacatcacaatgagagaaatcttgagatcgt--aagtatgggaatacatggttgaagaaagacttataagaactgtttgctactaccga 16440634  T
Q  170 taccaacaatatacatcttcttttt 194  Q
    || |||||| || ||| ||||||||    
T  16440633 taacaacaagatgcatattcttttt 16440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 51372982 - 51372905
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||| |||||||||||| | |||| || |||||| ||||    
T  51372982 gtatgtgactgtatggttgaaggaaggcttataagaattgtttagtactacctatatcgacaagatgcatcttatttt 51372905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 10820636 - 10820708
Alignment:
Q  122 gactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||| |||||||||| ||||  |||||||||||||||||||||||||||| ||| || ||||||||| |||||    
T  10820636 gactacatggttgaaggaagatttataagaattgtttggtactacctatatcaataagatacatctttttttt 10820708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 20060431 - 20060371
Alignment:
Q  133 tgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||| ||| |||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  20060431 tgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 20060371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 2634502 - 2634581
Alignment:
Q  114 atgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||| |||||| || || ||||||||  |||||||||||||||||| |||||| ||||| || |||||||||||    
T  2634502 atgtatgagattgcatgattaaaggaaggcttgcaagaattgtttggtactagctatacaaacaagatgcatcttctttt 2634581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 217
Target Start/End: Original strand, 12728040 - 12728133
Alignment:
Q  127 catggttgaatgaaggcttataagaattgtttgg-tactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactcca 217  Q
    |||||||||| |||| |||||||||||||||||| |||| |||||| |||||| || |||||||||||  ||| ||||||  ||||||||||||    
T  12728040 catggttgaaggaagacttataagaattgtttggttactgcctatatcaacaagatgcatcttcttttcggtagcacattccataagaactcca 12728133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 237
Target Start/End: Original strand, 7548129 - 7548252
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaac 213  Q
    |||||||||| |||| || || |||| ||||||| |||||||||||| || ||||| |||||| || ||| |||||||| ||| | ||||  ||||||||    
T  7548129 gtatgagactacatgattaaaggaagacttataaaaattgtttggtattaactatatcaacaagatgcatattctttttggtagcccatttgataagaac 7548228  T
Q  214 tccatacttaaacgaacttgactt 237  Q
    |||| | |||| || |||||||||    
T  7548229 tccacaattaagcgtacttgactt 7548252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 198
Target Start/End: Complemental strand, 50003177 - 50003101
Alignment:
Q  122 gactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagta 198  Q
    |||||||||||| || | || ||||||| ||||||| ||||||||||||| |||||| || ||||||||||| ||||    
T  50003177 gactgcatggttaaagggagacttataataattgttgggtactacctatatcaacaagatgcatcttcttttcagta 50003101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 194
Target Start/End: Complemental strand, 16410895 - 16410753
Alignment:
Q  52 ctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataaga 151  Q
    ||||| ||| ||||||| ||||||||||| || |  |||||||||  ||  | ||||||||   ||||| || ||||| |||||| ||| ||||||||||    
T  16410895 ctcctagcaacttctagtcaaaccaaattaacttcagaatgagagggattctgagatcgtgtgagtatgggaatgcattgttgaaggaaagcttataaga 16410796  T
Q  152 attgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    ||| |||  ||||||| |||||||||| || |||||| |||||    
T  16410795 attatttactactaccaataccaacaagatgcatcttgttttt 16410753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 843073 - 842963
Alignment:
Q  84 attggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatac 183  Q
    |||| ||||||||  ||| | |||||||| | ||||| | ||||||| ||||| |||| | | ||||||||||||||||||| | || ||||||| || |    
T  843073 attgaaatgagagggatcatgagatcgtgtaggtatgtgtctgcatgattgaaggaagtcgtgtaagaattgtttggtactatccattccaacaagatgc 842974  T
Q  184 atcttcttttt 194  Q
    || ||||||||    
T  842973 atgttcttttt 842963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 2739560 - 2739638
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    ||||||||||| |||||| |   ||| |||||||||||||||| | ||||| |||| |||||||||  |||||||||||    
T  2739560 gtatgagactgtatggttaaggaaagacttataagaattgtttagcactacatatatcaacaatatgtatcttcttttt 2739638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 178
Target Start/End: Original strand, 23180732 - 23180830
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    |||||||||||||||||  ||||| |   |||| | | ||| |||| | |||||||| ||| | |||||||||||| ||||||||||||||| ||||||    
T  23180732 tcacattggaatgagagggatcttgaagccgtgtaggaatgggactacgtggttgaaggaatgattataagaattgcttggtactacctatatcaacaa 23180830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 42317661 - 42317709
Alignment:
Q  114 atgtatgagactgcatggttgaatgaaggcttataagaattgtttggta 162  Q
    |||||||||| |||| |||| || ||| |||||||||||||||||||||    
T  42317661 atgtatgagattgcacggttaaaggaatgcttataagaattgtttggta 42317709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 5e-37; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 1821910 - 1822047
Alignment:
Q  82 acattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatat 181  Q
    |||| ||||||||||| ||||| || ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||    
T  1821910 acatcggaatgagagagatcttaaggtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagat 1822009  T
Q  182 acatcttctttttagtaacacatt--ataagaactcca 217  Q
     |||||||||||| ||| | ||||  ||||||||||||    
T  1822010 gcatcttctttttggtagcccattccataagaactcca 1822047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 237
Target Start/End: Complemental strand, 10927610 - 10927388
Alignment:
Q  16 agtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcat 115  Q
    ||||||||| |||||||||| || ||||||||| ||||||   || ||| |||   |||| ||| ||||| ||||||||||  ||||| ||  |||| |     
T  10927610 agtgatcgtcggtgcacaaggcacgacaatgagcagctcccaacaacttatagaggaaccgaat-cacatcggaatgagagggatcttgaggccgtgtag 10927512  T
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaac 213  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||| ||| | ||||  ||||||||    
T  10927511 gtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaac 10927412  T
Q  214 tccatacttaaacgaacttgactt 237  Q
    |||| | |||||||  ||||||||    
T  10927411 tccacagttaaacgtgcttgactt 10927388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 34867821 - 34867938
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--a 206  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||  ||| | ||||  |    
T  34867821 cgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctcatttca 34867920  T
Q  207 taagaactccatacttaa 224  Q
    ||||||||||||| ||||    
T  34867921 taagaactccatagttaa 34867938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 26 - 195
Target Start/End: Complemental strand, 43356816 - 43356649
Alignment:
Q  26 ggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagact 125  Q
    |||||||| |||||| |||||||  |||||||||   |||||||| ||| |||||||||| ||||||||||   || | ||||| |||| ||||||||||    
T  43356816 ggtgcacatgacatggcaatgagcggctcctggcggtttctaggcgaactaaattcacatcggaatgagaggg-tcctgagatcatgcaggtatgagact 43356718  T
Q  126 gcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttta 195  Q
    ||||| ||||  || | ||||||||||||||||||||| ||||| ||||||||||| |||||||||||||    
T  43356717 gcatgattgag-gatgacttataagaattgtttggtacaacctaaaccaacaatatgcatcttcttttta 43356649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 237
Target Start/End: Complemental strand, 10927153 - 10926931
Alignment:
Q  16 agtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcat 115  Q
    ||||||||| |||||||||| || ||||||||| |||||| | || ||| |||   |||| ||| |||||  |||||||||  ||| | || ||||| |     
T  10927153 agtgatcgtcggtgcacaaggcacgacaatgagtagctcccgacagcttatagaggaaccgaat-cacatcagaatgagagggatcctgaggtcgtgtag 10927055  T
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaac 213  Q
    ||||| |||| |||||||||| |||||||||||||||||||||||||||||||||| |||||| || ||||||| |||| |||   ||||  ||||||||    
T  10927054 gtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttccttttggtagtccattccataagaac 10926955  T
Q  214 tccatacttaaacgaacttgactt 237  Q
    |||| | |||||||  ||||||||    
T  10926954 tccacagttaaacgtgcttgactt 10926931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 193
Target Start/End: Complemental strand, 20039671 - 20039505
Alignment:
Q  26 ggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagact 125  Q
    |||||||||| |||||||||||| |||||| | || ||||||| |||||| ||| ||||| ||||||||||  ||| | ||  |||| | ||||  ||||    
T  20039671 ggtgcacaaggcatgacaatgagcagctcccgacagcttctagacaaaccgaat-cacatcggaatgagagggatcatgaggccgtgtaggtataggact 20039573  T
Q  126 gcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
     ||| |||||| |||||||||||||||||||||||||||||||||| |||||| || ||| |||||||    
T  20039572 acatagttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcattttctttt 20039505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 193
Target Start/End: Complemental strand, 21886363 - 21886177
Alignment:
Q  6 gagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatcttta 105  Q
    ||||||||| |||| |||  |||||||||| || |||||||||  |||||||| | |||||||   |||| ||| ||||  ||||||||||   || | |    
T  21886363 gagggcggagagtggtcgccggtgcacaaggcacgacaatgagcggctcctggtagcttctagaggaaccgaat-cacaccggaatgagagggttcctga 21886265  T
Q  106 gatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    | | ||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||| || |||||||||||    
T  21886264 ggttgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacatatatcaacaagatgcatcttctttt 21886177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 22556508 - 22556651
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| |||||||||||| |  | |||||| ||||||||||   || | ||  |||||| ||||| ||||||||||||||| |||||||||||     
T  22556508 gctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttatat 22556607  T
Q  150 gaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||||||||||||| |||||| || |||||||||||    
T  22556608 gaattgtttggtactacctatatcaacaagatgcatcttctttt 22556651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 193
Target Start/End: Original strand, 189053 - 189183
Alignment:
Q  63 ttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggta 162  Q
    ||||||||||| |  | |||||| ||||||||||  ||| | ||  ||| |||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  189053 ttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggcttataagaattgtttggta 189152  T
Q  163 ctacctataccaacaatatacatcttctttt 193  Q
    ||||||||| |||||| ||  ||||||||||    
T  189153 ctacctatatcaacaagatgtatcttctttt 189183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 193
Target Start/End: Original strand, 2473961 - 2474074
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaat 179  Q
    |||||| ||||||||||  ||| | || |||| || | ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||     
T  2473961 tcacatcggaatgagagggatcctaaggtcgtacaggcatgagactgcatggttgaaggaaggcttataagaattgtttggtactgcctatatcaacaag 2474060  T
Q  180 atacatcttctttt 193  Q
    || |||||||||||    
T  2474061 atgcatcttctttt 2474074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 8642149 - 8642065
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||| ||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||| || |||||||||||    
T  8642149 cgtgcaggtatgggactgcatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatgcatcttctttt 8642065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 80 - 192
Target Start/End: Complemental strand, 24182389 - 24182277
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaat 179  Q
    ||||||| |||||||||  ||||| ||| |||||| |||||||||   ||||||||| ||||||||||||||||| |||||||||| ||||||||||||     
T  24182389 tcacattagaatgagagggatcttgagaacgtgcaagtatgagacgaaatggttgaaggaaggcttataagaattatttggtactatctataccaacaag 24182290  T
Q  180 atacatcttcttt 192  Q
    || ||||||||||    
T  24182289 atgcatcttcttt 24182277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 22556941 - 22557084
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| ||||| |||||| |  | |||||| |||||||||||  || | ||  |||||| ||||| ||||||||||||||| |||||||||||     
T  22556941 gctcctggcatgcttcttggcaaaactgaatcacatcggaatgagagagttcatgaggccgtgcaggtatgggactgcatggttgaaggaaggcttatat 22557040  T
Q  150 gaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||||||||| ||| |||||| || |||||||||||    
T  22557041 gaattgtttggtactaccaatatcaacaagatgcatcttctttt 22557084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 193
Target Start/End: Original strand, 2474378 - 2474520
Alignment:
Q  52 ctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataag 150  Q
    |||||||||| |||||||| ||| |  | |||||| ||||||||||| ||| | || |||| ||  |||| ||||||||||||||| |||| |||| |||    
T  2474378 ctcctggcatgcttctaggaaaaactgaatcacatcggaatgagagagatcctaaggtcgtacagatatgggactgcatggttgaaggaagacttaaaag 2474477  T
Q  151 aattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||||||||||||||| |||||| || |||||||||||    
T  2474478 aattgtttggtactacctatatcaacaagatgcatcttctttt 2474520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 27646932 - 27646840
Alignment:
Q  127 catggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactcca 217  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||| ||| | ||||  ||||||||||||    
T  27646932 catggttgaaggaaggcttataagaattgtttggtactacctataacaacaagatgcatcttctttttggtagcccatttcataagaactcca 27646840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 2193854 - 2193931
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||| |||||| || |||||||||||    
T  2193854 gtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctttt 2193931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 80 - 193
Target Start/End: Complemental strand, 3886745 - 3886632
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaat 179  Q
    |||||| ||||||||||  ||| | || |||| || ||||| ||||||||||| ||| ||| ||||||| |||||||||||||||||||||| ||||||     
T  3886745 tcacatcggaatgagagggatcctgaggtcgtacaagtatgggactgcatggtagaaggaatgcttatatgaattgtttggtactacctatatcaacaag 3886646  T
Q  180 atacatcttctttt 193  Q
    || |||||||||||    
T  3886645 atgcatcttctttt 3886632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 17445557 - 17445488
Alignment:
Q  122 gactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctt 191  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||    
T  17445557 gactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctt 17445488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 18750297 - 18750181
Alignment:
Q  123 actgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactccatac 220  Q
    |||||||||||||| ||||| |||||| ||||||||||||||||||||||||| || || |||||||||||  ||| |  |||  ||||||||||||||     
T  18750297 actgcatggttgaaggaaggattataacaattgtttggtactacctataccaaaaagatgcatcttcttttcggtagcttattccataagaactccataa 18750198  T
Q  221 ttaaacgaacttgactt 237  Q
    |||| || |||||||||    
T  18750197 ttaatcgtacttgactt 18750181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 193
Target Start/End: Complemental strand, 3887232 - 3887088
Alignment:
Q  50 agctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttata 148  Q
    |||||||||||| ||| |||||||| |  | |||||| ||||||||||  ||| | ||  ||| || ||||| ||||||||||||||| |||| ||||||    
T  3887232 agctcctggcatgcttttaggcaaaactgaatcacatcggaatgagagtgatcctgaggccgtacaggtatgggactgcatggttgaaggaagacttata 3887133  T
Q  149 agaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
     ||||| |||||||||||||||| |||||| || |||||||||||    
T  3887132 tgaattatttggtactacctatatcaacaagatgcatcttctttt 3887088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 34371656 - 34371727
Alignment:
Q  122 gactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||    
T  34371656 gactgcatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttctttt 34371727  T

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Target: chr5; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 42788748 - 42788677
Alignment:
Q  122 gactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  42788748 gactacatggttgaaagaagacttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 42788677  T

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Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 34372106 - 34372183
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| |||||||||| ||| ||||| |||||||||||||||||||||||| |||||| || |||||||||||    
T  34372106 gtatgggactacatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttctttt 34372183  T

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Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 194
Target Start/End: Complemental strand, 4658107 - 4658023
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||||| |||||||||| |||||||||| ||||  |||||||| ||||||| ||||||||||| |||||| || ||||||||||||    
T  4658107 cgtgcaggtatgagacttcatggttgaacgaaga-ttataagacttgtttgatactacctataacaacaacatgcatcttcttttt 4658023  T

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Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 32574765 - 32574694
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatctt 188  Q
    ||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||| ||||| || ||||||    
T  32574765 gtatgagactgcacggttaaa-gaaggcttataggaattgtttggtactacctatacaaacaaaatgcatctt 32574694  T

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Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 30719919 - 30719836
Alignment:
Q  110 gtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| ||||| |||  ||| |||||| ||||||||||| ||||||||||||||||||||||  ||||| || |||||||||||    
T  30719919 gtgcaagtatgggacatcattgttgaaggaaggcttatatgaattgtttggtactacctataaaaacaagatgcatcttctttt 30719836  T

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Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 16370816 - 16370738
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||| |||||||||||||||| |||  |||||||||||||||||||||||| |||| |||||| |   |||||||||||    
T  16370816 gtataagactgcatggttgaaggaaaacttataagaattgtttggtactacttatatcaacaagacgtatcttcttttt 16370738  T

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Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 42429194 - 42429260
Alignment:
Q  127 catggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||| || | |||||||||||||||||||||||||| || ||||||||| ||| |||||||    
T  42429194 catggttgaaggaggacttataagaattgtttggtactacctttatcaacaatatgcatattctttt 42429260  T

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Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 2058763 - 2058702
Alignment:
Q  117 tatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    |||||||||| ||| ||||| |||| |||||| |||||||||||||||||||||| ||||||    
T  2058763 tatgagactggatgattgaaggaagacttatatgaattgtttggtactacctatatcaacaa 2058702  T

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Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 194
Target Start/End: Complemental strand, 5067006 - 5066921
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||||||||||||||||| ||| || || |||  |||||||||||||||||||| || ||||| |||||| || ||| ||||||||    
T  5067006 cgtgcatgtatgagactgtatgattaaaggaaaacttataagaattgtttggtattatctatatcaacaagatgcattttcttttt 5066921  T

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Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 193
Target Start/End: Original strand, 18304370 - 18304546
Alignment:
Q  16 agtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcat 115  Q
    ||||||||  ||||||||||||| |||||||||  ||||| | || ||||||| | |||||||| ||||  |||||||||   ||| | || ||||| |     
T  18304370 agtgatcgccggtgcacaagacacgacaatgagcggctcccgacagcttctagacgaaccaaat-cacaacggaatgagaaggatcctgaggtcgtgtag 18304468  T
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| ||||| |||   || |||||||  ||||||||||||||||||||| |||||| || ||| |||||||    
T  18304469 gtatgggactacatggatgatgaaaagcttatataaattgtttggtactacctatatcaacaagatgcatattctttt 18304546  T

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Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 39146977 - 39147080
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaac 213  Q
    ||||| |||| |||||||||| | || ||||||||||||||||| |||||| ||||  ||||| || |||||||||||| ||| | ||||  ||||||||    
T  39146977 gtatgggactacatggttgaaggtagacttataagaattgtttgatactacttatattaacaagatgcatcttctttttggtagcccattccataagaac 39147076  T
Q  214 tcca 217  Q
    ||||    
T  39147077 tcca 39147080  T

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Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 171
Target Start/End: Complemental strand, 39801197 - 39801101
Alignment:
Q  75 caaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctata 171  Q
    ||||||||||||||||||| || |||| |||||||||| |||| | ||||| |||||||| | || | || |||| ||||| ||| |||||||||||    
T  39801197 caaattcacattggaatgaaaggaatccttagatcgtgtatgtttaagactacatggttggaagatgactgataataattgcttgatactacctata 39801101  T

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Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 193
Target Start/End: Complemental strand, 8391427 - 8391353
Alignment:
Q  118 atgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||| |||| ||||| |||| |||||||||||||||||||||| ||| || |||||| || |||||||||||    
T  8391427 atgagactacatgattgaaggaagacttataagaattgtttggtact-cctgtatcaacaagatgcatcttctttt 8391353  T

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Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 237
Target Start/End: Complemental strand, 15513121 - 15512997
Alignment:
Q  116 gtatgagactgcatggttgaatgaag--gcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataaga 211  Q
    ||||| |||| |||||||||| |||   |||||||||||||||| ||||||||| ||| |||||| || |||||||||||| ||| | ||||  ||||||    
T  15513121 gtatgggactacatggttgaaggaatatgcttataagaattgtt-ggtactaccaatatcaacaagatgcatcttctttttggtatctcattccataaga 15513023  T
Q  212 actccatacttaaacgaacttgactt 237  Q
    |||||| | |||||||  ||||||||    
T  15513022 actccacaattaaacgtgcttgactt 15512997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 158
Target Start/End: Complemental strand, 22975185 - 22975076
Alignment:
Q  50 agctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttata 148  Q
    ||||| |||||| |||||||||||| |  | |||||| ||||||||||  ||| | ||  |||||| ||||| |||||||||||||||  || |||||||    
T  22975185 agctcttggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgtgcaggtatgtgactgcatggttgaagaaaagcttata 22975086  T
Q  149 agaattgttt 158  Q
    ||||||||||    
T  22975085 agaattgttt 22975076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 11160789 - 11160713
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttt 192  Q
    |||||| ||| ||| |||||| |||||||||||| ||||||||||||||| ||||  |||||| || ||| ||||||    
T  11160789 gtatgacactacatagttgaaggaaggcttataataattgtttggtactatctatgtcaacaagatgcatattcttt 11160713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 30684649 - 30684587
Alignment:
Q  131 gttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||| | ||||||||| |||||||||||||||| |||||  ||||| || |||||||||||    
T  30684649 gttgaagggaggcttatatgaattgtttggtactatctataaaaacaagatgcatcttctttt 30684587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 20858626 - 20858539
Alignment:
Q  139 aaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactccatacttaa 224  Q
    |||||||||||||||||||||||| |  ||||| |||||| || | |||||||||  ||| | ||||  |||||||||||||| ||||    
T  20858626 aaggcttataagaattgtttggtattttctatatcaacaagatgcttcttcttttctgtagctcattccataagaactccatagttaa 20858539  T

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Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 52 - 193
Target Start/End: Complemental strand, 31284449 - 31284307
Alignment:
Q  52 ctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataag 150  Q
    |||||||||| |||||||||||| |  | |||||| ||||||||||  ||||| || ||||||| ||||| ||||||||||||||| |||||||||||||    
T  31284449 ctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcttgaggtcgtgcaggtatgggactgcatggttgaaggaaggcttataag 31284350  T
Q  151 aattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||||||||||||||| |||||| || |||||||||||    
T  31284349 aattgtttggtactacctatatcaacaagatgcatcttctttt 31284307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 193
Target Start/End: Original strand, 7477165 - 7477306
Alignment:
Q  52 ctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataaga 151  Q
    |||||||||  ||||||||||| || | |||||| ||||||||||  ||| | |  ||||||| ||||||||||||||||||||| ||||||||||||||    
T  7477165 ctcctggcagtttctaggcaaaacataatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataaga 7477264  T
Q  152 attgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||| ||||||||||| |||| |||||| ||||||||||||||    
T  7477265 attttttggtactacttatatcaacaagatacatcttctttt 7477306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 193
Target Start/End: Original strand, 7493865 - 7493996
Alignment:
Q  62 cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggt 161  Q
    |||||||||||| || | |||||| ||||||||||| ||| | |  ||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||    
T  7493865 cttctaggcaaaacataatcacatcggaatgagagagatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggt 7493964  T
Q  162 actacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| |||||| || |||||||||||    
T  7493965 actacttatatcaacaagatgcatcttctttt 7493996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 25230445 - 25230253
Alignment:
Q  26 ggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagact 125  Q
    |||||||||| || |||||||||  ||||| | |||||| |||   |||||||| ||||| |||| |||||  ||| | || ||||| | ||||| ||||    
T  25230445 ggtgcacaaggcacgacaatgagcggctcccgacatcttatagaggaaccaaat-cacatcggaaggagagggatcctgaggtcgtgtaggtatgggact 25230347  T
Q  126 gcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactcca 217  Q
     |||||||||| ||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||| ||| | ||||  ||||||||||||    
T  25230346 acatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttctttttggtagcccattcaataagaactcca 25230253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 25238032 - 25237840
Alignment:
Q  26 ggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagact 125  Q
    |||||||||| || |||||||||  ||||| | |||||| |||   |||||||| ||||| |||| |||||  ||| | || ||||| | ||||| ||||    
T  25238032 ggtgcacaaggcacgacaatgagcggctcccgacatcttatagaggaaccaaat-cacatcggaaggagagggatcctgaggtcgtgtaggtatgggact 25237934  T
Q  126 gcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactcca 217  Q
     |||||||||| ||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||| ||| | ||||  ||||||||||||    
T  25237933 acatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatacatcttctttttggtagcccattcaataagaactcca 25237840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 16 - 217
Target Start/End: Complemental strand, 20885323 - 20885122
Alignment:
Q  16 agtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcat 115  Q
    ||||||||  |||||||||| || | |||||||  ||||| | || |||||||   ||||||  |||||| | ||||||||  ||||| || ||||| |     
T  20885323 agtgatcgccggtgcacaaggcacgccaatgagcggctcccgacaacttctagaggaaccaa--tcacatcgcaatgagagggatcttgaggtcgtgtag 20885226  T
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaac 213  Q
    ||||| |||| |||||||||| |||| ||||||||||||||||| ||||||||||| |||||| || |||||||||||||||| ||||||  ||||||||    
T  20885225 gtatgtgactacatggttgaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatcttctttttagtagcacattccataagaac 20885126  T
Q  214 tcca 217  Q
    ||||    
T  20885125 tcca 20885122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 28561777 - 28561861
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  28561777 cgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 28561861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 193
Target Start/End: Complemental strand, 27187474 - 27187361
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaat 179  Q
    |||||||||||||||||  ||| | ||   ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||  ||     
T  27187474 tcacattggaatgagagggatcctgaggctgtgcatgtatgggactgcatggttaaatgaaggcttataagaattgtttggtactacctatatcactaag 27187375  T
Q  180 atacatcttctttt 193  Q
    || |||||||||||    
T  27187374 atgcatcttctttt 27187361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 194
Target Start/End: Complemental strand, 25230902 - 25230735
Alignment:
Q  26 ggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagact 125  Q
    |||||||||| || ||||||||| |||||| | || ||| |||   |||||||| ||||||||||||||||  ||| | ||  | || | ||||||||||    
T  25230902 ggtgcacaaggcacgacaatgagcagctcccgacagcttatagaggaaccaaat-cacattggaatgagagggatcctgaggccatgtaggtatgagact 25230804  T
Q  126 gcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
     |||||||||| ||||| |||||||||||||||||||||||||||| |||||| || ||| ||||||||    
T  25230803 acatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcattttcttttt 25230735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 194
Target Start/End: Complemental strand, 25238489 - 25238322
Alignment:
Q  26 ggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagact 125  Q
    |||||||||| || ||||||||| |||||| | || ||| |||   |||||||| ||||||||||||||||  ||| | ||  | || | ||||||||||    
T  25238489 ggtgcacaaggcacgacaatgagcagctcccgacagcttatagaggaaccaaat-cacattggaatgagagggatcctgaggccatgtaggtatgagact 25238391  T
Q  126 gcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
     |||||||||| ||||| |||||||||||||||||||||||||||| |||||| || ||| ||||||||    
T  25238390 acatggttgaaggaaggtttataagaattgtttggtactacctatatcaacaagatgcattttcttttt 25238322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 193
Target Start/End: Original strand, 29224363 - 29224439
Alignment:
Q  117 tatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||| || |||||||||||    
T  29224363 tatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatactaacaagatgcatcttctttt 29224439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 50347782 - 50347887
Alignment:
Q  114 atgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataaga 211  Q
    |||||||||||| | |||||||| |||||||||||||||||||| ||||||||||||| |||||| || |||||||||||| ||| | ||||  ||||||    
T  50347782 atgtatgagactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctttttggtagctcattccataaga 50347881  T
Q  212 actcca 217  Q
    ||||||    
T  50347882 actcca 50347887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 32386849 - 32386760
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagta 198  Q
    |||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||  ||||| || ||||||||||| ||||    
T  32386849 cgtgcaggtatgggactgtatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttcttttcagta 32386760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 80 - 193
Target Start/End: Original strand, 41472303 - 41472415
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaat 179  Q
    |||||| ||||||||||  ||| | || |||| || ||||||||||||||||||||| |||| |||||||||||||||||||||||| |||| ||||||     
T  41472303 tcacatcggaatgagagggatcctgaggtcgtacaggtatgagactgcatggttgaaggaag-cttataagaattgtttggtactacatatatcaacaag 41472401  T
Q  180 atacatcttctttt 193  Q
    || |||||||||||    
T  41472402 atgcatcttctttt 41472415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 237
Target Start/End: Original strand, 30529725 - 30529848
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaac 213  Q
    |||||||||| ||||||||||  |||||||||||||||| |||||||||||||||| |||||| || |||||||||||| ||| | ||||  ||||||||    
T  30529725 gtatgagactacatggttgaagtaaggcttataagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaac 30529824  T
Q  214 tccatacttaaacgaacttgactt 237  Q
    | |||| |||| ||  ||||||||    
T  30529825 ttcatagttaagcgtgcttgactt 30529848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 32797043 - 32796940
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaac 213  Q
    |||||| ||| ||||||||||  ||| ||||||||||||||||||||||||||||| |||||| || |||||||||||| ||| ||||||  ||||||||    
T  32797043 gtatgaaactacatggttgaagcaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttttgtagcacattccataagaac 32796944  T
Q  214 tcca 217  Q
    ||||    
T  32796943 tcca 32796940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 11180142 - 11180065
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||| |||||| || |||||||||||    
T  11180142 gtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctttt 11180065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 14813987 - 14814064
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||||||||| || |||||||||||| ||||||||||||||||||||| ||| || || |||||||||||    
T  14813987 gtatgagactgcatggttaaaggaaggcttataataattgtttggtactacctatatcaataagatgcatcttctttt 14814064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 109 - 194
Target Start/End: Original strand, 25248142 - 25248227
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||||| ||||| |||||||||||| || ||| | |||||||||||||||||||||||||||| |||||| || ||||||||||||    
T  25248142 cgtgcaggtatgggactgcatggttaaaggaatgtttataagaattgtttggtactacctatatcaacaagatgcatcttcttttt 25248227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 13150207 - 13150104
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaac 213  Q
    ||||| |||| |||||||||| |||||||||||||||||||| |||||||||| || |||||| || ||||||||||| |||| | ||||  ||||||||    
T  13150207 gtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatcttcttttcagtagctcattccataagaac 13150108  T
Q  214 tcca 217  Q
    ||||    
T  13150107 tcca 13150104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 13150657 - 13150585
Alignment:
Q  121 agactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||||||||| |||||||||||||||||||| ||||||||||||| |||||| || |||||||||||    
T  13150657 agactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctttt 13150585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 217
Target Start/End: Complemental strand, 32227329 - 32227226
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaac 213  Q
    ||||| |||| |||||||||| |||||||||||||||||||| |||||||||||||  ||||| || |||||||||||| ||| | ||||  ||||||||    
T  32227329 gtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttctttttggtagctcatttcataagaac 32227230  T
Q  214 tcca 217  Q
    ||||    
T  32227229 tcca 32227226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 39640975 - 39641078
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaac 213  Q
    |||||||||| |||||||||| |||| ||||||||| ||||||||||||||||||| ||| || || |||||||||||| ||| | ||||  ||||||||    
T  39640975 gtatgagactacatggttgaaggaagacttataagagttgtttggtactacctatatcaataagatgcatcttctttttggtagctcattccataagaac 39641074  T
Q  214 tcca 217  Q
    ||||    
T  39641075 tcca 39641078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 39653195 - 39653279
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||| ||||| ||||||||||||||| ||| |||||||||||||||| | ||||||||||| |||||| || |||||||||||    
T  39653195 cgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgttggatactacctatatcaacaagatgcatcttctttt 39653279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 217
Target Start/End: Complemental strand, 25238790 - 25238689
Alignment:
Q  118 atgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactc 215  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||||| || || |||||| || |||||||||||| ||| | ||||  ||||||||||    
T  25238790 atgagactacatggttgaaggaagacttataagaattgtttggtactatctttatcaacaagatgcatcttctttttggtagcccattccataagaactc 25238691  T
Q  216 ca 217  Q
    ||    
T  25238690 ca 25238689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 25802656 - 25802579
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||||||||| |  ||||||| |||||||| ||||||||||||||||| |||||| || |||||||||||    
T  25802656 gtatgagactgcatggttaacggaaggctgataagaatggtttggtactacctatatcaacaagatgcatcttctttt 25802579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 32227538 - 32227615
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| |||||||||| |||||||||||||||||||| |||||||||||||  ||||| || |||||||||||    
T  32227538 gtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatcttctttt 32227615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 25239173 - 25239082
Alignment:
Q  128 atggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactcca 217  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||| |||||| || |||||||||||| ||| | ||||  ||||||||||||    
T  25239173 atggttgaaggaacgcttataagaattttttggtactacctatatcaacaagatgcatcttctttttggtagcccattccataagaactcca 25239082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 8067311 - 8067441
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--a 206  Q
    |||||| ||||| || |||||||||||| |  |||||||||||||||||| |||||||||||| |||||| || |||||| ||||  ||| | ||||  |    
T  8067311 cgtgcaggtatgggattgcatggttgaaggccggcttataagaattgtttagtactacctatatcaacaagatgcatctttttttcggtagctcattcca 8067410  T
Q  207 taagaactccatacttaaacgaacttgactt 237  Q
    ||||||||||||| |||| ||  ||||||||    
T  8067411 taagaactccatagttaagcgtgcttgactt 8067441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 16811425 - 16811496
Alignment:
Q  122 gactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||| |||||||||| |||||||||||||||||||| ||||||||||||  |||||| || |||||||||||    
T  16811425 gactccatggttgaaggaaggcttataagaattgttgggtactacctatttcaacaagatgcatcttctttt 16811496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 217
Target Start/End: Complemental strand, 4067454 - 4067365
Alignment:
Q  130 ggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactcca 217  Q
    ||||||| |||| ||||||| ||||||||||||||||||||| |||||| || |||||||||||| ||| | ||||  ||||||||||||    
T  4067454 ggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattacataagaactcca 4067365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 31104068 - 31103990
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||||||| ||||||||| || |||| ||||||||||||||||| ||||| |||||||||| | || ||| ||||||||    
T  31104068 gtatgagattgcatggttcaaggaagacttataagaattgtttgatactatctataccaactagatgcattttcttttt 31103990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 193
Target Start/End: Original strand, 16810927 - 16811040
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaat 179  Q
    |||||| ||||||||||  ||||| ||  |||| |  |||| ||||||||||||||  ||||||||||||||||||||  |||||| ||||| | ||||     
T  16810927 tcacatcggaatgagagggatcttgaggccgtgtagatatgggactgcatggttgatggaaggcttataagaattgttgcgtactaactatatctacaag 16811026  T
Q  180 atacatcttctttt 193  Q
    || |||||||||||    
T  16811027 atgcatcttctttt 16811040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 25803112 - 25803035
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||||||||||||||  ||| ||| |||||||||||||||||||||||||  ||||| ||  ||||||||||    
T  25803112 gtatgggactgcatggttgaagtaagacttgtaagaattgtttggtactacctataaaaacaagatgtatcttctttt 25803035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 14820214 - 14820269
Alignment:
Q  138 gaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||||||||||||||||||||||| |||| |||||| || |||||| ||||    
T  14820214 gaaggcttataagaattgtttggtactacttatatcaacaagatgcatcttatttt 14820269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 178
Target Start/End: Original strand, 41473999 - 41474097
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    |||||| | ||||||||  ||||| || |||| || ||||| ||||| |||||| || |||| ||||||||||||||||| |||| |||||| ||||||    
T  41473999 tcacatcgaaatgagagggatcttgaggtcgttcaggtatgtgactggatggttaaaggaagacttataagaattgtttgatacttcctatatcaacaa 41474097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 37045090 - 37045151
Alignment:
Q  133 tgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||| ||| ||||||||||||||||||||| |||||||| ||||||  | ||||||||||||    
T  37045090 tgaaggaatgcttataagaattgtttggtaatacctatatcaacaaggtgcatcttcttttt 37045151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 3899868 - 3899915
Alignment:
Q  146 ataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||||||||||||||| ||||||||||| || |||||| ||||    
T  3899868 ataagaattgtttggtactacatataccaacaagatgcatcttttttt 3899915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 26310103 - 26310021
Alignment:
Q  110 gtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttt 192  Q
    |||||| ||||| | |||||||||||| || |  ||||||||||| |||| |||||| |||||||| || || ||||||||||    
T  26310103 gtgcatatatgatattgcatggttgaaggacgatttataagaattttttgttactacatataccaaaaagatgcatcttcttt 26310021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 15392570 - 15392610
Alignment:
Q  138 gaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    ||||||||||||||||||||||||| ||||  |||||||||    
T  15392570 gaaggcttataagaattgtttggtattaccggtaccaacaa 15392610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 15405606 - 15405646
Alignment:
Q  138 gaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    ||||||||||||||||||||||||| ||||  |||||||||    
T  15405606 gaaggcttataagaattgtttggtattaccggtaccaacaa 15405646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 15411015 - 15411055
Alignment:
Q  138 gaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    ||||||||||||||||||||||||| ||||  |||||||||    
T  15411015 gaaggcttataagaattgtttggtattaccggtaccaacaa 15411055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 15417431 - 15417471
Alignment:
Q  138 gaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    ||||||||||||||||||||||||| ||||  |||||||||    
T  15417431 gaaggcttataagaattgtttggtattaccggtaccaacaa 15417471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 38899131 - 38898917
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    ||||||||||  |||| ||||||||||| ||||||||| ||||||  ||||| | || ||||||| ||| |||||| ||||| |||| |||||  |||||    
T  38899131 acgagggcggggagtggtcgttggtgcataagacatgaaaatgagtggctcccgacaacttctagacaagccaaat-cacatcggaaggagagtgatctt 38899033  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacaca 203  Q
     ||  |||| | |||| ||||| |||||||||| ||  |||||||||||||||||||||||||||||| |||||| || ||| |||||||| ||||||||    
T  38899032 gaggccgtgtaggtatcagactacatggttgaaggagagcttataagaattgtttggtactacctatatcaacaagatgcattttctttttggtaacaca 38898933  T
Q  204 tt--ataagaactcca 217  Q
    ||  ||||||||||||    
T  38898932 tttcataagaactcca 38898917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 33174885 - 33175099
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    ||||||||||  |||| |||  |||||||||| ||||||||||||  ||||| | || ||||||| ||| || ||| ||||| ||||||||||  ||| |    
T  33174885 acgagggcggggagtggtcgccggtgcacaaggcatgacaatgagtggctcccgacaacttctagacaagccgaat-cacatcggaatgagagggatcct 33174983  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacaca 203  Q
     ||  |||| | ||||| |||| |||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||| ||| | ||    
T  33174984 gaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctca 33175083  T
Q  204 tt--ataagaactcca 217  Q
    ||  ||||||||||||    
T  33175084 tttcataagaactcca 33175099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 224
Target Start/End: Complemental strand, 18099085 - 18098876
Alignment:
Q  16 agtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcat 115  Q
    ||||||||  |||||||||| || ||||||||| |||||| | || ||| |||   |||| ||| ||||| |||||||||| |||| | ||  |||| |     
T  18099085 agtgatcgccggtgcacaaggcacgacaatgagcagctcccgacagcttatagaggaaccgaat-cacatcggaatgagaggaatcctgaggccgtgtag 18098987  T
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaac 213  Q
    |||||||||| |||||||||| | | |||||||||||||||||||||||||||||| |||||| || |||||||||||| ||| | ||||  ||||||||    
T  18098986 gtatgagactacatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtagctcattccataagaac 18098887  T
Q  214 tccatacttaa 224  Q
    |||||| ||||    
T  18098886 tccatagttaa 18098876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 237
Target Start/End: Original strand, 30966206 - 30966395
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| |||||||||||| |  | || ||| ||||||||||  ||| | ||  ||| || ||||| ||||||||||||||| ||||||||||||    
T  30966206 gctcctggcatgcttctaggcaaaactgaatcgcatcggaatgagagggatcctgaggccgtacaggtatgggactgcatggttgaaggaaggcttataa 30966305  T
Q  150 gaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactccatacttaaacgaacttgactt 237  Q
    |||||||||||||||||||||| |||||| || |||||||||||  ||| | ||||  |||||||||||||| |||| ||  ||||||||    
T  30966306 gaattgtttggtactacctatatcaacaagatgcatcttcttttcggtatctcattccataagaactccatagttaagcgtgcttgactt 30966395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 193
Target Start/End: Original strand, 41754216 - 41754404
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    ||||||||||  |||| |||  |||||||||| || |||||||||  ||||||| || |||||||   |||  ||| ||||  ||||||||||   ||||    
T  41754216 acgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaactgaat-cacaccggaatgagagggttctt 41754314  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
     ||  |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||| || |||||||||||    
T  41754315 gaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagatgcatcttctttt 41754404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 217
Target Start/End: Original strand, 16378968 - 16379078
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--a 206  Q
    |||||| ||||||||||||||||||||| |||| |||||| |||||||||| ||||||||||| |||||| || |||||||||||| ||| ||||||  |    
T  16378968 cgtgcaagtatgagactgcatggttgaaggaagtcttatacgaattgtttgatactacctatatcaacaagatgcatcttctttttggtagcacattcca 16379067  T
Q  207 taagaactcca 217  Q
    |||||||||||    
T  16379068 taagaactcca 16379078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 217
Target Start/End: Original strand, 16379424 - 16379534
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--a 206  Q
    |||||| ||||| ||||||||||||||| |||| |||||| |||||||||||||||||||||| |||||| || |||||||||||| ||| ||||||  |    
T  16379424 cgtgcaggtatgggactgcatggttgaaggaagacttatacgaattgtttggtactacctatatcaacaagatgcatcttctttttggtagcacattcca 16379523  T
Q  207 taagaactcca 217  Q
    |||||||||||    
T  16379524 taagaactcca 16379534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 30966662 - 30966805
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| |||||||||||| |  | || ||| ||||||||||  ||| | ||  ||| |||||||| ||||||||||||||| ||||| ||||||    
T  30966662 gctcctggcatgcttctaggcaaaactgaatcgcatcggaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggattataa 30966761  T
Q  150 gaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||||||||||||| |||||| || |||||||||||    
T  30966762 gaattgtttggtactacctatatcaacaagatgcatcttctttt 30966805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 194
Target Start/End: Original strand, 15619929 - 15620014
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||||| |||||||||||||| |||||| | | |||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  15619929 cgtgcaagtatgagactgcatagttgaaggcaagcttataagaattgtttggtactacctatatcaacaagatacatcttcttttt 15620014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 25338113 - 25338028
Alignment:
Q  108 tcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||| || |||||||||||    
T  25338113 tcgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctttt 25338028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 5399991 - 5399848
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| ||||||||||||    | |||||| ||||||||||  ||||| || ||||||| ||||| || || |||||| || | ||||||||||    
T  5399991 gctcctggcatgcttctaggcaaaattgaatcacatcggaatgagagggatcttgaggtcgtgcaagtatgggagtgtatggtttaagggaggcttataa 5399892  T
Q  150 gaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||||||||||||| |||||| || |||||||||||    
T  5399891 gaattgtttggtactacctatatcaacaagatgcatcttctttt 5399848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 24818298 - 24818441
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| |||||||| ||| |  | |||||| ||||||||||  ||| | ||  |||||||||||| |||||||||||| || ||||||||||||    
T  24818298 gctcctggcatgcttctaggtaaaactgaatcacatcggaatgagagggatcctgaggccgtgcatgtatgggactgcatggttcaaggaaggcttataa 24818397  T
Q  150 gaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||| |||||||||||| |||||| || |||||| ||||    
T  24818398 gaattgtttagtactacctatatcaacaagatgcatcttttttt 24818441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 1953185 - 1953271
Alignment:
Q  108 tcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    ||||||| ||||||||||||||||||||| |||| | ||||||||||||||||||||||||||| |||| | || ||||||||||||    
T  1953185 tcgtgcaggtatgagactgcatggttgaaggaagacctataagaattgtttggtactacctatatcaactagatgcatcttcttttt 1953271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 194
Target Start/End: Original strand, 1706968 - 1707157
Alignment:
Q  3 aacgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatct 102  Q
    |||||||||||  |||| |||| |||||||||| || |||||||||  ||||| | ||  ||||||   |||| ||| ||||| |||||||||| | ||     
T  1706968 aacgagggcggggagtggtcgtcggtgcacaaggcacgacaatgagcggctcccgacaatttctagaggaaccgaat-cacatcggaatgagagga-tcc 1707065  T
Q  103 ttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    | |||  ||| | |||||||||| |||| ||||| |||| ||||||||||||||||||||||||||||| |||||| || ||||||||||||    
T  1707066 tgagactgtgtaggtatgagactacatgattgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttcttttt 1707157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 13191012 - 13191090
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||| ||||||||||||| || |||| |||||||||||||||||||||||| ||||||||||| || ||||||||||||    
T  13191012 gtataagactgcatggttcaaggaagacttataagaattgtttggtactacatataccaacaagatgcatcttcttttt 13191090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 8256564 - 8256641
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||| |||||| || |||||||||||    
T  8256564 gtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctttt 8256641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 109 - 194
Target Start/End: Complemental strand, 27883041 - 27882956
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| || ||||| ||| || || ||||||||||||    
T  27883041 cgtgcatgtatgagactgcattgttgaaggaatgcttataagaattgtttggtattatctatatcaataagatgcatcttcttttt 27882956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 80 - 193
Target Start/End: Complemental strand, 29259764 - 29259651
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaat 179  Q
    |||||| ||||||||||  ||| | ||| ||| || ||||| ||||||||||||||| |||||||||| | |||||||||||||||| |||| ||||||     
T  29259764 tcacatcggaatgagagggatcctgagaccgtacaagtatgggactgcatggttgaaggaaggcttattaaaattgtttggtactacatatatcaacaag 29259665  T
Q  180 atacatcttctttt 193  Q
    || |||||||||||    
T  29259664 atgcatcttctttt 29259651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 33771039 - 33771116
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| ||||||| |||||||  ||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  33771039 gtatgggactgcagggttgaagaaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 33771116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 178
Target Start/End: Original strand, 20502053 - 20502123
Alignment:
Q  108 tcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||  ||||| ||||||    
T  20502053 tcgtgcaagtatgggactgcatggttgaaggaaggcttataagaattgtttggtactttctatatcaacaa 20502123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 33174556 - 33174618
Alignment:
Q  131 gttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  33174556 gttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 33174618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 83044 - 83117
Alignment:
Q  105 agatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    |||| ||||| |||||||||| |||||||||| | | |||||||||||| ||||||||||||||||||||||||    
T  83044 agattgtgcaggtatgagactacatggttgaaggtatgcttataagaatcgtttggtactacctataccaacaa 83117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 1912563 - 1912640
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||| |||||||||| | ||  |||||||||||||||||||||||||||| |||||| || |||||||||||    
T  1912563 gtatgagactacatggttgaaagtagatttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 1912640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 29804720 - 29804797
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| |||||||||| | |||||||||||||||||| ||||||||||||| |||||| || |||||||||||    
T  29804720 gtatgggactacatggttgaaggcaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctttt 29804797  T

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Target: chr2; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 8073944 - 8074035
Alignment:
Q  130 ggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactccata 219  Q
    ||||||| | || |||||||||||||||||||||||||||||||||||| || |||||||||| | ||| | ||||  ||||||||||||||    
T  8073944 ggttgaagggagacttataagaattgtttggtactacctataccaacaagatgcatcttctttcttgtagcccatttcataagaactccata 8074035  T

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Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 172
Target Start/End: Original strand, 37552519 - 37552661
Alignment:
Q  29 gcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgca 128  Q
    ||||||||||||| ||||||  ||||| |  | ||||||||  ||||||||||||||| ||||||||| | || | ||| | |||| ||||| |||||||    
T  37552519 gcacaagacatgataatgagcggctccagatagcttctaggagaaccaaattcacattagaatgagaggattcctgagaccatgcaagtatgggactgca 37552618  T
Q  129 tggttgaatgaaggcttataagaattgtttggtactacctatac 172  Q
    ||||  || | || |||||||||||||||||||||||| |||||    
T  37552619 tggtcaaacg-agacttataagaattgtttggtactacatatac 37552661  T

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Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 11388226 - 11388302
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||| |||||||||| ||| ||||| || ||||||||||||||||||||| |||||| || |||||||||||    
T  11388226 gtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttctttt 11388302  T

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Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 11394573 - 11394649
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||| |||||||||| ||| ||||| || ||||||||||||||||||||| |||||| || |||||||||||    
T  11394573 gtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttctttt 11394649  T

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Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 194
Target Start/End: Original strand, 15639781 - 15639850
Alignment:
Q  125 tgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    ||||| |||||| | | ||||||| |||||||||||||||||||||| |||||| |||||||||||||||    
T  15639781 tgcatagttgaaggcacgcttataggaattgtttggtactacctatatcaacaacatacatcttcttttt 15639850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 194
Target Start/End: Complemental strand, 30963362 - 30963293
Alignment:
Q  125 tgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||||| ||||| |||||||||||||||||||| ||||||||||||| |||||| || |||||| |||||    
T  30963362 tgcatgattgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatcttattttt 30963293  T

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Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 30963835 - 30963752
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttt 192  Q
    |||||| ||| |||| |||||||||||| |||  |||||||||||||| |||| ||||||||| |||||| || ||||||||||    
T  30963835 cgtgcaggtaagagaatgcatggttgaaggaaaacttataagaattgtatggttctacctatatcaacaagatgcatcttcttt 30963752  T

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Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 192
Target Start/End: Complemental strand, 25434253 - 25434088
Alignment:
Q  26 ggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagact 125  Q
    |||||||||| || |||||||||  ||||||| || ||||||  | |||| ||| ||||  ||||||||||  ||| | ||  |||||  ||||| ||||    
T  25434253 ggtgcacaaggcacgacaatgagcggctcctgacagcttctaaacgaaccgaat-cacaccggaatgagagggatcctgaggccgtgctggtatgggact 25434155  T
Q  126 gcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttt 192  Q
     |||||||||| |||||||||||||||||||||| ||| |||| || |||||| || ||||| ||||    
T  25434154 tcatggttgaaggaaggcttataagaattgtttgatacaacctttatcaacaagatgcatctccttt 25434088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 8181446 - 8181397
Alignment:
Q  129 tggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    |||||||| |||| ||| ||||||||||||||||||||||||| ||||||    
T  8181446 tggttgaaggaagacttttaagaattgtttggtactacctatatcaacaa 8181397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 18448026 - 18447954
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatctt 188  Q
    ||||| |||| ||||||||||  ||| |||||||||||||||||||||||| | || |||||| || ||||||    
T  18448026 gtatgtgactacatggttgaagtaagacttataagaattgtttggtactacttgtatcaacaagatgcatctt 18447954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 36924519 - 36924452
Alignment:
Q  129 tggttgaatgaaggcttataagaattgtttggtactac--ctataccaacaatatacatcttcttttt 194  Q
    |||||||| ||||||||||||||||||||||||| |||   |||| |||||| || ||||||||||||    
T  36924519 tggttgaaggaaggcttataagaattgtttggtattacttatatatcaacaagatgcatcttcttttt 36924452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 16542034 - 16542085
Alignment:
Q  127 catggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    |||||||||| |||| ||||||| |||||||| |||||||||||| ||||||    
T  16542034 catggttgaaggaagacttataataattgttttgtactacctatatcaacaa 16542085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 9909130 - 9909208
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    ||||||||||  ||||||||| || || ||||||  |||  |||||||||||||||||||||| || || |||||||||    
T  9909130 gtatgagactatatggttgaaggagggtttataatgattaattggtactacctataccaacaagattcaacttcttttt 9909208  T

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Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 62 - 237
Target Start/End: Original strand, 25147520 - 25147697
Alignment:
Q  62 cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggt 161  Q
    |||||||||||| | || |||||| ||||||||||| ||| | |||  ||| | ||||||||||||||||||||| ||||||||||||||||||||||||    
T  25147520 cttctaggcaaaactaaatcacatcggaatgagagagatcctaagactgtgtaggtatgagactgcatggttgaaggaaggcttataagaattgtttggt 25147619  T
Q  162 actacctataccaacaatatacatcttctttttagtaacacatt--ataagaactccatacttaaacgaacttgactt 237  Q
     ||||||||| |||||| || |||||||||||  ||| | ||||  |||||||||||||| |||| ||  ||||||||    
T  25147620 gctacctatatcaacaagatgcatcttcttttcggtagctcattccataagaactccatagttaatcgtgcttgactt 25147697  T

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Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 193
Target Start/End: Original strand, 22026328 - 22026494
Alignment:
Q  26 ggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagact 125  Q
    |||||||||| ||||||||||||  ||||||| || |||||||   |||| ||| ||||  ||||||||||   || | ||  |||||| ||||| ||||    
T  22026328 ggtgcacaaggcatgacaatgagcggctcctgacagcttctagaggaaccgaat-cacaccggaatgagagggttcgtgaggccgtgcaggtatgggact 22026426  T
Q  126 gcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  22026427 gcatggttgaatgaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 22026494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 194
Target Start/End: Complemental strand, 15567751 - 15567586
Alignment:
Q  28 tgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgc 127  Q
    |||||||||||||||||||||  |||| || || ||| || ||||||  ||| ||||| ||||||||||| ||||| | |||| ||| |||| ||||  |    
T  15567751 tgcacaagacatgacaatgagcggctcttgacaacttataagcaaactgaat-cacatcggaatgagagagatcttgacatcgcgcaagtattagacatc 15567653  T
Q  128 atggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    ||||| ||| ||||||||||||||||||||||  ||||| ||||||||||| |||||||||||||||    
T  15567652 atggtggaaggaaggcttataagaattgtttgacactacatataccaacaagatacatcttcttttt 15567586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 193
Target Start/End: Original strand, 10844810 - 10844998
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    ||||||||||  |||| |||  |||||||||| || |||||||||  ||||||| || |||||||   |||| ||| ||||  ||||||||||   || |    
T  10844810 acgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaat-cacaccggaatgagagggttcct 10844908  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
     ||  |||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  10844909 gaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 10844998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 193
Target Start/End: Original strand, 27925838 - 27926014
Alignment:
Q  16 agtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcat 115  Q
    |||| ||| ||||||||||| || |||||||||  ||||||| || |||||||   |||| ||| ||||  ||||||||||   || | ||  ||||||     
T  27925838 agtggtcgctggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaat-cacaccggaatgagagggttcctgaggccgtgcag 27925936  T
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||| || |||||||||||    
T  27925937 gtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttctttt 27926014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 41659221 - 41659136
Alignment:
Q  108 tcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  41659221 tcgtgcaggtatgggactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 41659136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 28375169 - 28375085
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||| | |||||| || |||||||||||    
T  28375169 cgtgcaggtatgagactgcatgattgaaggaaggcttataagaattgtttggtactacctacatcaacaagatgcatcttctttt 28375085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 22549109 - 22549026
Alignment:
Q  110 gtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  22549109 gtgcaggtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 22549026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 25144744 - 25144887
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| |||||||||||| |  | ||||||  |||||||||| ||||  || ||||||| ||||| || |||||| ||||| | ||||||||||    
T  25144744 gctcctggcatgcttctaggcaaaactgaatcacatcagaatgagagagatctcgaggtcgtgcaggtatgggattgcatgattgaaggcaggcttataa 25144843  T
Q  150 gaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||||||||||||| || ||| || |||||||||||    
T  25144844 gaattgtttggtactacctatatcagcaagatgcatcttctttt 25144887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 116 - 215
Target Start/End: Original strand, 3744676 - 3744777
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaac 213  Q
    ||||| ||||||||||||||| |||| |||||||||||||||||  |||||||||||||||||||| || ||||||||| ||| ||||||  ||||||||    
T  3744676 gtatgggactgcatggttgaaggaagacttataagaattgtttgacactacctataccaacaatatgcaccttctttttggtagcacatttcataagaac 3744775  T
Q  214 tc 215  Q
    ||    
T  3744776 tc 3744777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 194
Target Start/End: Complemental strand, 6465054 - 6464940
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaat 179  Q
    ||||||||||||||||| |||| | ||  |||| | |||||  ||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||     
T  6465054 tcacattggaatgagaggaatcatgaggccgtgtaggtatggaactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaag 6464955  T
Q  180 atacatcttcttttt 194  Q
    || ||| ||||||||    
T  6464954 atgcattttcttttt 6464940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 193
Target Start/End: Complemental strand, 27819359 - 27819277
Alignment:
Q  111 tgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||| |||||||||| |||||||||| ||||||| |||||||||||||||||||||||||| |||||| || |||||||||||    
T  27819359 tgcaagtatgagacttcatggttgaaggaaggctaataagaattgtttggtactacctatatcaacaaaatgcatcttctttt 27819277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 27021987 - 27021910
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||| || |||||||||||    
T  27021987 gtataagactgcatggttgaaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatcttctttt 27021910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 34308587 - 34308510
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||| |||||| || |||||||||||    
T  34308587 gtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctatatcaacaagatgcatcttctttt 34308510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 22548663 - 22548580
Alignment:
Q  110 gtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| ||||| ||||||||||||||| ||||  |||||||||||||||||||||||||||| |||||| || |||||||||||    
T  22548663 gtgcaggtatgtgactgcatggttgaaggaagttttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 22548580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 30335022 - 30334939
Alignment:
Q  110 gtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| ||||| ||||||| ||||||| |||| ||||||| ||||||||| |||||||||||||||||| ||||||||||||||    
T  30335022 gtgcaggtatgcgactgcaaggttgaaagaagacttataaaaattgtttgatactacctataccaacaagatacatcttctttt 30334939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 224
Target Start/End: Original strand, 1297034 - 1297155
Alignment:
Q  105 agatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacat 204  Q
    ||||| |||| |||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||| ||  || |||||||  ||| | |||    
T  1297034 agatcatgcaggtatgagactgcatggttgaagtaaaacttataagaattgtttggtactacctataccaacaagatttatattcttttcggtatcccat 1297133  T
Q  205 --tataagaactccatacttaa 224  Q
      ||||||||||||||| ||||    
T  1297134 tatataagaactccatagttaa 1297155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 2044096 - 2044174
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||||||||| |||||||||| |||||||||||||||||||||| ||||||||||| |||||| || ||| ||||||||    
T  2044096 gtatgagactacatggttgaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcattttcttttt 2044174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 193
Target Start/End: Complemental strand, 10844728 - 10844646
Alignment:
Q  111 tgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||| ||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||  ||||| || |||||||||||    
T  10844728 tgcaggtatgggactgcatggttgaaggaaggcttataagagttgtttggtactacctatattaacaagatgcatcttctttt 10844646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 193
Target Start/End: Original strand, 17103090 - 17103196
Alignment:
Q  87 ggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatc 186  Q
    ||||||||||| ||| | ||  ||| || ||||||||||||||||||||| |||| |||||||||||||||||||||| |||||| ||||||  | ||||    
T  17103090 ggaatgagagagatcctgaggccgtacaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactgcctatatcaacaagctgcatc 17103189  T
Q  187 ttctttt 193  Q
    |||||||    
T  17103190 ttctttt 17103196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 22840637 - 22840559
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||||||||| |||||| |||||||| ||||||||||||||||||||||| ||||| |||||| || ||||||||||||    
T  22840637 gtatgagactacatggtcgaatgaagacttataagaattgtttggtactatctatatcaacaagatgcatcttcttttt 22840559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 27022446 - 27022369
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| |||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||| ||||    
T  27022446 gtatgggactacatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaacatgcatcttatttt 27022369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 109 - 194
Target Start/End: Original strand, 32292428 - 32292513
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||| ||||| ||||||  | ||||||||||||    
T  32292428 cgtgcaagtatgggactgcatggttgaaggaatgcttataagaattgtttggtactatctatatcaacaagttgcatcttcttttt 32292513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 51 - 171
Target Start/End: Complemental strand, 34309113 - 34308992
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| |||||||||||| |  | |||||| ||||||||||  ||| | ||  ||| || ||||||||||| ||||||||| ||||||||||||    
T  34309113 gctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgtacaagtatgagactgtatggttgaaggaaggcttataa 34309014  T
Q  150 gaattgtttggtactacctata 171  Q
    ||| ||||||||||||||||||    
T  34309013 gaactgtttggtactacctata 34308992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 41913003 - 41913110
Alignment:
Q  111 tgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ata 208  Q
    |||| ||||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||| |||||| || | |||||||||| ||| | ||||  |||    
T  41913003 tgcaggtatgggactgcatgtttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcgtcttctttttggtagcccattccata 41913102  T
Q  209 agaactcc 216  Q
    ||||||||    
T  41913103 agaactcc 41913110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 21316224 - 21316114
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--a 206  Q
    |||||| ||||||||||| |||||| |||||  ||||| |||||||||||||||||||||||| |||||| || |||| |||||| |||| | ||||  |    
T  21316224 cgtgcaggtatgagactgtatggttaaatgagcgcttaaaagaattgtttggtactacctatatcaacaagatgcatcgtcttttcagtagctcatttca 21316125  T
Q  207 taagaactcca 217  Q
    |||||||||||    
T  21316124 taagaactcca 21316114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 6466661 - 6466820
Alignment:
Q  27 gtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactg 126  Q
    ||||||||| |||||||||||| |||||||| || |||| ||||||||||||| || ||  |||||||||  ||  | |||  ||||  |||||  ||||    
T  6466661 gtgcacaaggcatgacaatgagcagctcctgacagcttccaggcaaaccaaat-catatcagaatgagagggattctgagactgtgcgggtatggaactg 6466759  T
Q  127 catggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatctt 188  Q
    ||||||| || || | ||||||| |||||||||||||||||||||||||||| || ||||||    
T  6466760 catggttaaagga-gacttataaaaattgtttggtactacctataccaacaagatgcatctt 6466820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 12100729 - 12100806
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||||||||||||||| | | |||||||||| ||||||||||||||||||| ||| || || |||||||||||    
T  12100729 gtatgagactgcatggttgaaggcaagcttataagatttgtttggtactacctatatcaataagatgcatcttctttt 12100806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 12827362 - 12827285
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| | |||||||| |||||||||||||||||||| ||||||||||||| |||||| || |||||||||||    
T  12827362 gtatgggactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctttt 12827285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 194
Target Start/End: Complemental strand, 33852373 - 33852288
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||||| ||||||||||| ||||||||| |||  |||||||||||||||||||||||||||||  ||||| ||  |||||||||||    
T  33852373 cgtgcaggtatgagactgtatggttgaaggaaaacttataagaattgtttggtactacctatattaacaagatgtatcttcttttt 33852288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 122 - 194
Target Start/End: Original strand, 3745145 - 3745217
Alignment:
Q  122 gactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||| |||||||||| |||  |||||||||| ||||| |||||||||||||||||||||| ||||||||||||    
T  3745145 gactacatggttgaaggaaaacttataagaactgtttagtactacctataccaacaatatgcatcttcttttt 3745217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 8080450 - 8080372
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    ||||| |||| |||||||||| ||| ||| |||||||||||||||||||||||||| |||||| || ||| ||||||||    
T  8080450 gtatgggactacatggttgaaggaaagctgataagaattgtttggtactacctatatcaacaagatgcattttcttttt 8080372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 22705210 - 22705282
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatctt 188  Q
    ||||| ||||| ||| ||||| ||||| |||||||||||||||||||||||||||| |||||| || ||||||    
T  22705210 gtatgggactggatgattgaaggaagggttataagaattgtttggtactacctatatcaacaagatgcatctt 22705282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 28453368 - 28453452
Alignment:
Q  108 tcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttt 192  Q
    ||||||| |||||||||| |||||||||| |||  ||||||||||||||||  |||||||||||  ||||| || ||||||||||    
T  28453368 tcgtgcaggtatgagacttcatggttgaaagaaaacttataagaattgttttatactacctatattaacaagatgcatcttcttt 28453452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 178
Target Start/End: Original strand, 17429503 - 17429600
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    |||||| |||||||||| | |||| ||| ||||||| |||| |||||||| |||||| |||| ||||| || ||| |||||||||||||||| ||||||    
T  17429503 tcacatcggaatgagagga-tcttgagaccgtgcatatatgtgactgcattgttgaaggaagacttatgagtattatttggtactacctatatcaacaa 17429600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 25147939 - 25148082
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| |||||||||||| |  | ||||||  |||||||||  |||   || ||||| | ||||| |||||  | |||||| ||||||||||||    
T  25147939 gctcctggcatgcttctaggcaaaactgaatcacataagaatgagagggatcccgaggtcgtgtaggtatgggactgtgtcgttgaaggaaggcttataa 25148038  T
Q  150 gaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||||||  |||||||| |||||| || ||| |||||||    
T  25148039 gaattgtttggtcttacctatatcaacaagatgcatattctttt 25148082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 194
Target Start/End: Complemental strand, 15568199 - 15568035
Alignment:
Q  28 tgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgc 127  Q
    |||| ||| |||||||||||| | |||||| || ||||| | |||||||||| |||||  || ||||||| ||| | ||| ||| ||  |||| |||| |    
T  15568199 tgcataaggcatgacaatgagtaactcctgacaacttcttgacaaaccaaat-cacatgaga-tgagagagatcctgagaccgtacaaatatgtgacttc 15568102  T
Q  128 atggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
     |||||||| |||| ||||||| ||||||||||||  ||||||| |||||| || |||||| |||||    
T  15568101 ttggttgaaggaagacttataacaattgtttggtatgacctatatcaacaagatgcatctttttttt 15568035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 215
Target Start/End: Complemental strand, 15819121 - 15819022
Alignment:
Q  118 atgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactc 215  Q
    |||||||  |||||||||| ||| ||||| || |||||||||||||||| |||| |||||  || |||||||||||  ||| ||||||  ||||||||||    
T  15819121 atgagacaacatggttgaaggaatgcttagaaaaattgtttggtactacatatatcaacatgatgcatcttcttttcggtagcacattccataagaactc 15819022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 29971509 - 29971454
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctata 171  Q
    |||||||||| |||||||||| ||||  |||||||||||||||| ||||| |||||    
T  29971509 gtatgagactacatggttgaaggaagatttataagaattgtttgatactatctata 29971454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 30527589 - 30527513
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||||||||| |||||  | | ||||||||||||||||||||| || || | ||| || ||||||||||||||    
T  30527589 gtatgagactgcatgtttgaacca-gacttataagaattgtttggtaccacttacatcaataagatacatcttctttt 30527513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 9124931 - 9125074
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| |||||||||||| |  | |||||| ||||||||||| ||||| ||  |||||| ||||||||||| |||||| || ||| ||||||||    
T  9124931 gctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagagatcttgaggccgtgcaggtatgagactgtatggttaaaggaaagcttataa 9125030  T
Q  150 gaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||||||||||||| |||||| || |||||||||||    
T  9125031 gaattgtttggtactacctatatcaacaagatgcatcttctttt 9125074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 25182334 - 25182476
Alignment:
Q  51 gctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataag 150  Q
    |||||| ||| ||||||||||||    | |||||| ||||||||||| ||| | |||  ||||| ||||||||||||||||||||| |||| ||||||||    
T  25182334 gctcctagcagcttctaggcaaagacgagtcacatcggaatgagagagatcctgagactgtgcaagtatgagactgcatggttgaaggaagacttataag 25182433  T
Q  151 aattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||||||||||||||| |||||| ||||||||| ||||    
T  25182434 aattgtttggtactacctatatcaacaagatacatcttatttt 25182476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 194
Target Start/End: Complemental strand, 6747795 - 6747628
Alignment:
Q  26 ggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagact 125  Q
    |||||||||| ||||||||||||  ||||| | || ||||||| ||| |  ||| ||||||||||||||||  ||| | ||  |||| | |||||| |||    
T  6747795 ggtgcacaaggcatgacaatgagcggctcccgacaacttctagacaagctgaat-cacattggaatgagagggatcctgaggccgtgtaggtatgatact 6747697  T
Q  126 gcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
     |||||||||| ||||| |||||||||||||||||||||||||||| |||||| || ||||||||||||    
T  6747696 acatggttgaaggaaggattataagaattgtttggtactacctatatcaacaagatgcatcttcttttt 6747628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 13125310 - 13125167
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| |||||||||||| |  | ||| || ||||||||||  ||||| ||  | |||| ||||| ||||||||||||||| ||||||||||||    
T  13125310 gctcctggcatgcttctaggcaaaactgaatcatatcggaatgagagggatcttgaggccctgcaggtatgggactgcatggttgaaggaaggcttataa 13125211  T
Q  150 gaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||||||||||||||||  ||||| || |||||||||||    
T  13125210 gaattgtttggtactacctatattaacaagatgcatcttctttt 13125167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 217
Target Start/End: Original strand, 42515064 - 42515233
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| ||||||||||||    | |||||| ||||||||||  ||| | ||  |||||| ||||||||||||||| ||||| |||| |||||||    
T  42515064 gctcctggcatgcttctaggcaaaattgaatcacatcggaatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaagacttataa 42515163  T
Q  150 gaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactcca 217  Q
    |||||||||||||||||||||| |||||| || ||| |||||||| ||| | ||||  ||||||||||||    
T  42515164 gaattgtttggtactacctatatcaacaagatgcattttctttttggtagctcattccataagaactcca 42515233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 2193287 - 2193368
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttct 190  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || ||||||||    
T  2193287 cgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttct 2193368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 168
Target Start/End: Complemental strand, 13124875 - 13124757
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| |||||||||||| |  | ||| |||||||||||||  ||||| ||  |||||| ||||| ||||||||||||||| ||||||||||||    
T  13124875 gctcctggcatgcttctaggcaaaactgaatcatattggaatgagagggatcttgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataa 13124776  T
Q  150 gaattgtttggtactacct 168  Q
    ||||||| |||||||||||    
T  13124775 gaattgtgtggtactacct 13124757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 193
Target Start/End: Original strand, 42515506 - 42515659
Alignment:
Q  39 tgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatg 138  Q
    |||||||||| |||||| | || ||||||| | |||| ||| |||||  |||||||||  ||| | ||  |||| | |||||||||| |||||||||| |    
T  42515506 tgacaatgagcagctcccgacagcttctagacgaaccgaat-cacatcagaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaagg 42515604  T
Q  139 aaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||||| |||||||||||||||||| |||||| || |||||||||||    
T  42515605 aaggcttataagaagtgtttggtactacctatatcaacaagatgcatcttctttt 42515659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 2941865 - 2941788
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||| || |||||||||||    
T  2941865 gtatgggactgcatggttgaaggaaggctgataagaattgtttggtactacctatatcaacaagatgcatcttctttt 2941788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 26421875 - 26421791
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||||||||||||||||||||||  |||||| |||||||||||| |||||| ||||||||||||| ||  ||||||||||    
T  26421875 cgtgcatgtatgagactgcatggttgaagtaaggctcataagaattgttaggtactccctataccaacaagatgaatcttctttt 26421791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 2189188 - 2189259
Alignment:
Q  122 gactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||| || |||||||||||    
T  2189188 gactgcatggttgaaagaaggcttataagaattgtttggcactacctatatcaacaagatgcatcttctttt 2189259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 2611760 - 2611650
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacat--tataagaac 213  Q
    ||||||||||  ||||| ||| |||||||||||||||||||||||||||| ||||| |||||| || |||||||||||| ||| | |||  |||||||||    
T  2611760 gtatgagactatatggtggaaggaaggcttataagaattgtttggtactatctataacaacaagatgcatcttctttttggtagcccattctataagaac 2611661  T
Q  214 tccatacttaa 224  Q
    |||||| ||||    
T  2611660 tccatagttaa 2611650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 11517562 - 11517420
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| |||||||||||| |  | |||||| ||||||||||  ||| | ||  ||| || ||||| ||||||||||| ||| ||||||||||||    
T  11517562 gctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactgcatggt-gaaggaaggcttataa 11517464  T
Q  150 gaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||||||||||||| |||||| || ||||| |||||    
T  11517463 gaattgtttggtactacctatatcaacaagatgcatctactttt 11517420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 179
Target Start/End: Complemental strand, 26957776 - 26957602
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    ||||||||||  |||| |||| |||||||||| || |||||||||  ||||| | || |||||||   |||| ||| ||||| ||||||||||  |||||    
T  26957776 acgagggcgggaagtggtcgtcggtgcacaaggcacgacaatgagcggctcccgacaacttctagaggaaccgaat-cacatcggaatgagagggatctt 26957678  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaat 179  Q
     ||   ||| | |||||  ||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  26957677 gaggctgtgtaggtatggaactacatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaat 26957602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 27 - 193
Target Start/End: Complemental strand, 31744021 - 31743855
Alignment:
Q  27 gtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactg 126  Q
    ||||||||||||||| |||| | |||||| |||| ||| |||| ||| |  | ||| || | |||||||   ||||| | |||||||| | |||||||||    
T  31744021 gtgcacaagacatgataatgtgcagctccaggcaacttttaggaaaaactgaatcatatcgaaatgagatggatcttgaaatcgtgcaagcatgagactg 31743922  T
Q  127 catggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||| ||| |||||||||||| ||||||| ||| ||||| |||||| || |||||||||||    
T  31743921 catggttgaaggaatgcttataagaatggtttggtgctatctatatcaacaagatgcatcttctttt 31743855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 2489987 - 2490132
Alignment:
Q  26 ggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagact 125  Q
    |||||||||| ||||||||||||  | ||||| || ||||||||  ||   |||||||||   |||||| |||||||| |||| ||||| ||||| ||||    
T  2489987 ggtgcacaaggcatgacaatgagcggttcctgacaacttctaggtgaattgaattcacatctaaatgagtgaaatcttgagattgtgcacgtatgtgact 2490086  T
Q  126 gcatggttgaatgaaggcttataagaattgtttggtactacctata 171  Q
    ||||| ||||| ||| ||||||||||| |||||| |||||||||||    
T  2490087 gcatgattgaaggaatgcttataagaagtgtttgttactacctata 2490132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 6719182 - 6719105
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| |||||||||| ||| |||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  6719182 gtatgggactacatggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 6719105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 80 - 193
Target Start/End: Original strand, 28495856 - 28495969
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaat 179  Q
    |||||| ||||||||||  ||||| ||  |||| | ||||| |||| |||||||||| ||||||||||||||| |||| ||||||||||||| ||||||     
T  28495856 tcacatcggaatgagagggatcttgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaactgttgggtactacctatatcaacaag 28495955  T
Q  180 atacatcttctttt 193  Q
    || |||||||||||    
T  28495956 atgcatcttctttt 28495969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 29039127 - 29039050
Alignment:
Q  117 tatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||| |||| |||||||||||| ||||||| |||||||||||||||||||||||| |||||| || ||||||||||||    
T  29039127 tatgtgactacatggttgaatggaggcttacaagaattgtttggtactacctatatcaacaacatgcatcttcttttt 29039050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 29357572 - 29357487
Alignment:
Q  108 tcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||| ||||| ||||||||||||||| ||| | |||||||||||||||||||||| ||||| |||||| || |||||||||||    
T  29357572 tcgtgcaggtatgggactgcatggttgaaggaatgtttataagaattgtttggtactaactatatcaacaagatgcatcttctttt 29357487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 87 - 217
Target Start/End: Complemental strand, 35474258 - 35474126
Alignment:
Q  87 ggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatc 186  Q
    ||||||||||  ||| |||| ||||| | |||||||||| ||||||||||  ||| |||||||||||||||| ||||||| |||| |||||| || ||||    
T  35474258 ggaatgagagggatccttaggtcgtgtaggtatgagactacatggttgaagaaagacttataagaattgtttagtactacttatatcaacaagatgcatc 35474159  T
Q  187 ttctttttagtaacacatt--ataagaactcca 217  Q
    |||||||| ||| | ||||  ||||||||||||    
T  35474158 ttctttttggtagctcattccataagaactcca 35474126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 36422290 - 36422367
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||| |||||| || |||||||||||    
T  36422290 gtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctttt 36422367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 2465777 - 2465848
Alignment:
Q  122 gactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||| |||||||||| |||||||||||||| ||||||||||||||||||| |||||| || |||||||||||    
T  2465777 gactacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagatgcatcttctttt 2465848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 2465962 - 2466039
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| |||||||||| |||||||||||||| ||||||||||||||||||| ||||||  | |||||||||||    
T  2465962 gtatgggactacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagttgcatcttctttt 2466039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 34405699 - 34405622
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||| |||||  || |||||||||||    
T  34405699 gtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaggatgcatcttctttt 34405622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 46425779 - 46425856
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| ||||||||||  |||||||||||||||||||||||| |||||||| |||||| || |||||||||||    
T  46425779 gtatgggactacatggttgaaataaggcttataagaattgtttggtattacctatatcaacaagatgcatcttctttt 46425856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 22529332 - 22529253
Alignment:
Q  127 catggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatta 206  Q
    |||||||||| ||||||||||||||| |||||||||||| |||||  ||||| || ||||||||||| |||||| |||||    
T  22529332 catggttgaaggaaggcttataagaaatgtttggtactatctatataaacaagatgcatcttcttttcagtaactcatta 22529253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 36015525 - 36015442
Alignment:
Q  110 gtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||||||||| |||||||||| ||| ||||| ||||||||||||||||||| |||| |||||| || | |||||||||    
T  36015525 gtgcaagtatgagactccatggttgaaggaaagcttaaaagaattgtttggtactacatatatcaacaagatgcctcttctttt 36015442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 5406696 - 5406618
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    ||||| ||||||||||||||| ||||  ||||||||||||||||||| |||||||| |||||| || |||||| |||||    
T  5406696 gtatgggactgcatggttgaaggaagatttataagaattgtttggtattacctatatcaacaagatgcatcttattttt 5406618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 35527237 - 35527147
Alignment:
Q  108 tcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagta 198  Q
    |||||||  |||| |||||  |||||||| |||||||||||||||||||||||| ||||||||| |||||| || ||| ||||||| ||||    
T  35527237 tcgtgcaaatatgggactggttggttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcatattcttttcagta 35527147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 178
Target Start/End: Original strand, 6585566 - 6585708
Alignment:
Q  28 tgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgc 127  Q
    ||||||||||||||||| |||  ||| |||  | |||||| ||||| | ||||||||| | |||||||||||||        |||||  ||||||| |||    
T  6585566 tgcacaagacatgacaacgagcggctactgatagcttctatgcaaatcgaattcacatcgaaatgagagaaatc--------gtgcagatatgagattgc 6585657  T
Q  128 atggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    ||| ||||| |||| ||||||| ||||||||||||||||||||| ||||||    
T  6585658 atgattgaaagaagacttataaaaattgtttggtactacctatatcaacaa 6585708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 11372501 - 11372550
Alignment:
Q  128 atggttgaatgaaggcttataagaattgtttggtactacctataccaaca 177  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  11372501 atggttgaaggaaggcttataagaattgtttggtactacctgtaccaaca 11372550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 159
Target Start/End: Original strand, 33316676 - 33316809
Alignment:
Q  26 ggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagact 125  Q
    |||||||||| |||||||| |||  |||| || || ||||||| |||||  ||| ||||| ||||||||| |||| || |  ||||||| ||||||||||    
T  33316676 ggtgcacaaggcatgacaacgagcggctcatgacagcttctagacaaactgaatccacatcggaatgagataaattttgatgtcgtgcaggtatgagact 33316775  T
Q  126 gcatggttgaatgaaggcttataagaattgtttg 159  Q
     |||||||||| |||   ||||||||||||||||    
T  33316776 acatggttgaaggaaaaattataagaattgtttg 33316809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 18833331 - 18833401
Alignment:
Q  123 actgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||||  ||| ||||||| ||||||||| |||||||||||| |||||| || |||||||||||    
T  18833331 actgcatggttgagggaaagcttatatgaattgtttagtactacctatatcaacaagatgcatcttctttt 18833401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 217
Target Start/End: Original strand, 679866 - 679957
Alignment:
Q  127 catggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactcca 217  Q
    ||||| |||| |||||||||||||||||| ||||||||||||||| |||||| || ||| |||||||| ||| | ||||  ||||||||||||    
T  679866 catggctgaaggaaggcttataagaattg-ttggtactacctatatcaacaagatgcatattctttttggtagcccattccataagaactcca 679957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 194
Target Start/End: Original strand, 37672191 - 37672276
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||||| |||| |||||||||||||| |  |||| |||||| |||||||||||||||| | ||||||||| || || |||||||||    
T  37672191 cgtgcaggtataagactgcatggttgcaaaaaggtttataataattgtttggtactacttgtaccaacaagatgcaacttcttttt 37672276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 43233451 - 43233528
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| ||||| |||||| || |||| ||||||||||||||||||||||| ||||| |||||| || |||||| ||||    
T  43233451 gtatgtgactgtatggttaaaggaagacttataagaattgtttggtactatctatatcaacaagatgcatcttttttt 43233528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 16192368 - 16192435
Alignment:
Q  127 catggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||| ||||||||||| ||||||||||||||||||| |||||| | |||||| || ||||||| ||||    
T  16192368 catgattgaatgaaggattataagaattgtttggtattacctacatcaacaagatgcatcttcgtttt 16192435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 3305420 - 3305374
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggta 162  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||||    
T  3305420 gtatgggactacatggttgaatgaaggcttatgagaattgtttggta 3305374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 9623240 - 9623322
Alignment:
Q  110 gtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttt 192  Q
    ||||||| |||||||| |||||| ||| ||   ||||||||||||||||| ||| ||||||| |||||| || ||||||||||    
T  9623240 gtgcatgcatgagactccatggtagaaggagtacttataagaattgtttgataccacctatatcaacaagatgcatcttcttt 9623322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 11372937 - 11372999
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    |||||||| ||||||||||||||||| ||| ||||||||||||  || || ||||||||||||    
T  11372937 gtatgagattgcatggttgaatgaagacttgtaagaattgtttcatagtatctataccaacaa 11372999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 170
Target Start/End: Complemental strand, 16811954 - 16811900
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctat 170  Q
    |||||||||| |||||||||| ||| ||||||||||||||||| |||||| ||||    
T  16811954 gtatgagactacatggttgaaggaatgcttataagaattgttttgtactatctat 16811900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 20966089 - 20966151
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    ||||||||||||||| ||||| || | |||||||||||| ||| ||| |||||||||||||||    
T  20966089 gtatgagactgcatgattgaaggatgacttataagaattattttgtaatacctataccaacaa 20966151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 28495745 - 28495639
Alignment:
Q  87 ggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatc 186  Q
    ||||||||||  ||| | || ||||| | ||||| |||| |||||||||| |||| |||||||||||||||  ||  |||||||| |||||| || ||||    
T  28495745 ggaatgagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaagacttataagaattgttgagttttacctatatcaacaagatgcatc 28495646  T
Q  187 ttctttt 193  Q
    |||||||    
T  28495645 ttctttt 28495639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 37671903 - 37671796
Alignment:
Q  77 aattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaac 176  Q
    ||||||||  ||||||||||  ||||| | | ||||  |||||| |||||||| || ||||||||  |||||| ||||||| |||||||||||| |||||    
T  37671903 aattcacaccggaatgagagggatcttgataccgtgtgtgtatgtgactgcattgtggaatgaagatttataaaaattgtt-ggtactacctatgccaac 37671805  T
Q  177 aatatacat 185  Q
    || ||||||    
T  37671804 aagatacat 37671796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 193
Target Start/End: Complemental strand, 31406686 - 31406615
Alignment:
Q  122 gactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| ||||||||| || | ||||| |||||||||||||  |||||||| |||||| || |||||||||||    
T  31406686 gactgaatggttgaaagatgacttattagaattgtttggtgttacctatatcaacaagatgcatcttctttt 31406615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 26421401 - 26421351
Alignment:
Q  128 atggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    ||||||||| |||| ||||||||||||| ||| ||||||||||| ||||||    
T  26421401 atggttgaaggaagacttataagaattgcttgatactacctatatcaacaa 26421351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 198
Target Start/End: Complemental strand, 9424071 - 9423878
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    ||||||||||  |||| |||| |||||||||| || ||||| |||  ||||| | |  ||||||| | |||| ||| ||||  ||||||||||  ||| |    
T  9424071 acgagggcggggagtggtcgtcggtgcacaaggcacgacaaagagtggctcccgacgacttctagacgaaccgaat-cacaccggaatgagagggatcct 9423973  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagta 198  Q
     || ||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||| || |||||||||| |||||    
T  9423972 gaggtcgtgcatgtatgggactgcatggttgaaagaaggcttataataattgtttggtactacctatatcaacaagatgcatcttctttctagta 9423878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 1645962 - 1645748
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    ||||||||||  |||| |||  |||||||||| || |||||||||  ||||||| || |||||||   |||| ||| ||||| |||||||||| ||||||    
T  1645962 acgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaat-cacatcggaatgagaggaatctt 1645864  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacaca 203  Q
     ||  |||| | ||||| |||| |||||||||| |||| |||||||||||||||||||| |||||||| |||||| || |||||||||||| ||| | ||    
T  1645863 gaggccgtgtaggtatgggactacatggttgaaggaagacttataagaattgtttggtattacctatatcaacaagatgcatcttctttttggtagccca 1645764  T
Q  204 tt--ataagaactcca 217  Q
    ||  ||||||||||||    
T  1645763 ttccataagaactcca 1645748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 50398751 - 50398517
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    ||||||||||  |||| |||  |||||||||| ||||||||||||  ||||| | || ||||||| ||| || ||| ||||| ||||||||||  ||| |    
T  50398751 acgagggcggggagtggtcgccggtgcacaaggcatgacaatgagcggctcccgacaacttctagacaagccgaat-cacatcggaatgagagggatcct 50398653  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacaca 203  Q
     ||  |||| | ||||  |||| |||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||  ||| | ||    
T  50398652 gaggccgtgtaggtataggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcggtagctca 50398553  T
Q  204 tt--ataagaactccatacttaaacgaacttgactt 237  Q
    ||  |||||||||||||| |||| ||  ||||||||    
T  50398552 ttccataagaactccatagttaagcgtgcttgactt 50398517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 23350451 - 23350308
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| |||||||||||| |  | |||||| ||||||||||| ||||| ||  ||| || ||| | ||||||||||||||| ||||||||||||    
T  23350451 gctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagagatcttgaggccgtacaggtaggggactgcatggttgaaggaaggcttataa 23350352  T
Q  150 gaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||||||||| |||||| |||||| || |||||||||||    
T  23350351 gaattgtttggtacttcctatatcaacaagatgcatcttctttt 23350308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 111 - 193
Target Start/End: Complemental strand, 31817959 - 31817877
Alignment:
Q  111 tgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||||||||||    
T  31817959 tgcatgtatgggactgcatggttgaaggaaggcttataagaattgttcggtactacctataccaacaagatgcatcttctttt 31817877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 193
Target Start/End: Complemental strand, 50399183 - 50399018
Alignment:
Q  27 gtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactg 126  Q
    ||||||||| ||||||||||||  ||| ||| || ||||||| ||| || ||| ||||| ||||||||||  ||| | ||| |||| | |||||||| |     
T  50399183 gtgcacaaggcatgacaatgagcggcttctgacaacttctagacaagccgaat-cacatcggaatgagagggatcctgagaccgtgtaggtatgagatta 50399085  T
Q  127 catggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||  || |||||||||||    
T  50399084 catggttgaaggaaggcttataagaattgtttggtactacctatatcaacacgatgcatcttctttt 50399018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 193
Target Start/End: Complemental strand, 12692212 - 12692024
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    ||||||||||  |||| |||  |||||||||| || |||||||||  ||||||| || |||||||   |||| ||| ||||  ||||||||||   || |    
T  12692212 acgagggcggggagtggtcgccggtgcacaaggcacgacaatgagcggctcctgacagcttctagaggaaccgaat-cacaccggaatgagagggttcct 12692114  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
     ||  |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  12692113 gaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 12692024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 193
Target Start/End: Complemental strand, 44471463 - 44471350
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaat 179  Q
    |||||| ||||||||||| ||||| ||  ||| || |||||||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||     
T  44471463 tcacatcggaatgagagagatcttgaggccgtacaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaag 44471364  T
Q  180 atacatcttctttt 193  Q
    || |||||||||||    
T  44471363 atgcatcttctttt 44471350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 8467908 - 8467825
Alignment:
Q  110 gtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||| || |||||||||||    
T  8467908 gtgcaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctataccaacaagatgcatcttctttt 8467825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 3169155 - 3169367
Alignment:
Q  26 ggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagact 125  Q
    ||||||||||||| |||||||||   |||||| || ||| |||   |||| ||| ||||| |||||||||| |||| | ||  |||| | ||||| ||||    
T  3169155 ggtgcacaagacacgacaatgagcgactcctgacagcttatagaggaaccgaat-cacatcggaatgagaggaatcatgaggccgtgtaggtatgggact 3169253  T
Q  126 gcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactccatactta 223  Q
     |||||||||| |||| ||||||| ||||||||||||||||||||| |||||| || |||||||||||| ||||| || |  |||||||||||| |||||    
T  3169254 acatggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttctttttggtaacccaatccataagaactccacactta 3169353  T
Q  224 aacgaacttgactt 237  Q
    | ||  ||||||||    
T  3169354 agcgtgcttgactt 3169367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 31817508 - 31817423
Alignment:
Q  108 tcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||||||||| |||||||||| ||| | |||||| |||||||||||||||||||||||||||| || |||||||||||    
T  31817508 tcgtgcatgtatgagacttcatggttgaaggaacgtttataataattgtttggtactacctataccaacaaaatgcatcttctttt 31817423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 193
Target Start/End: Complemental strand, 51331419 - 51331306
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaat 179  Q
    |||||| |||||||||| |||| | ||  |||| | ||||| |||| |||||||||| |||||||||||||||||||||||||||| ||||| ||||||     
T  51331419 tcacatcggaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactatctatatcaacaag 51331320  T
Q  180 atacatcttctttt 193  Q
    ||||||||||||||    
T  51331319 atacatcttctttt 51331306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 194
Target Start/End: Original strand, 14351744 - 14351911
Alignment:
Q  26 ggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagact 125  Q
    |||||||||| || |||||||||  ||||| | || ||||||| |||||| ||| ||||   |||||||||  ||| | || ||||||||||||||| ||    
T  14351744 ggtgcacaaggcacgacaatgagcggctcccgacaacttctagacaaaccgaat-cacaccagaatgagagggatcctgaggtcgtgcatgtatgagtct 14351842  T
Q  126 gcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    ||||||||||| |||||||| ||||| || |||||||||| ||||| |||||| || ||||||||||||    
T  14351843 gcatggttgaaggaaggcttgtaagagttttttggtactatctatatcaacaagatgcatcttcttttt 14351911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 23942880 - 23942788
Alignment:
Q  127 catggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactcca 217  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||||| || |||||||||||| ||| ||||||  ||||||||||||    
T  23942880 catggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttttgtagcacattccataagaactcca 23942788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 193
Target Start/End: Complemental strand, 4127989 - 4127914
Alignment:
Q  118 atgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||  ||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  4127989 atgagactatatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 4127914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 49998680 - 49998751
Alignment:
Q  122 gactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  49998680 gactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 49998751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 178
Target Start/End: Original strand, 17029257 - 17029430
Alignment:
Q  4 acgagggcggatagtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctt 103  Q
    |||||||||| || || || |||||||||||  ||||||||||||  |||| ||| ||||| |||  ||||  |||| |||| ||||||||||  ||||     
T  17029257 acgagggcgggtattggtcattggtgcacaaagcatgacaatgagcggctcttggtatcttttagtaaaactgaatt-acatcggaatgagagggatcta 17029355  T
Q  104 tagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
     || ||||||| ||||| |||||||| ||||||||||| ||| ||| |||||||| |||||||||||| ||||||    
T  17029356 gaggtcgtgcaagtatgggactgcatagttgaatgaagacttgtaataattgtttagtactacctatatcaacaa 17029430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 17628560 - 17628626
Alignment:
Q  127 catggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  17628560 catggttgaaggtaggcttataagaattgtttggtactacctataccaacaagatgcatcttctttt 17628626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 33764891 - 33765008
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacaca--tta 206  Q
    ||||| ||||| ||||| |||||||| |||||| ||| ||||||||||||||| |||||||||||||||| || |||||||||||| ||| | ||  |||    
T  33764891 cgtgcgtgtataagactacatggttggatgaagacttttaagaattgtttggtgctacctataccaacaagatgcatcttcttttttgtagctcatttta 33764990  T
Q  207 taagaactccatacttaa 224  Q
    |||||||| || ||||||    
T  33764991 taagaacttcacacttaa 33765008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 44470976 - 44470902
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttct 190  Q
    ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| || ||||||||    
T  44470976 gtatgtgactgtatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttct 44470902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 21220421 - 21220344
Alignment:
Q  128 atggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt 205  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| |||||| || |||||||||||| ||||| ||||    
T  21220421 atggttgaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttctttttggtaactcatt 21220344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 24629535 - 24629458
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||||||||||| || ||| |||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  24629535 gtatgggactgcatggttaaaggaatgcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 24629458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 14572252 - 14572176
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttt 192  Q
    ||||| |||| |||||||||| | |||||||||||||||||||||||||||||||| |||||| || ||||||||||    
T  14572252 gtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttt 14572176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 196
Target Start/End: Original strand, 17628938 - 17629086
Alignment:
Q  48 gaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttat 147  Q
    ||||||| ||||| |||||||||||| | ||| |||||  ||||||| |  ||| | || ||||||| ||||| || || |||||||||| ||  |||||    
T  17628938 gaagctcttggcagcttctaggcaaatcgaatccacatcagaatgagtgggatcctaaggtcgtgcaggtatgtgaatgtatggttgaataaaaacttat 17629037  T
Q  148 aagaattgtttggtactacctataccaacaatatacatcttctttttag 196  Q
    ||||||||||||||||||||||||| || || || | ||||||||||||    
T  17629038 aagaattgtttggtactacctatactaataagatgcctcttctttttag 17629086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 21067312 - 21067396
Alignment:
Q  108 tcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttt 192  Q
    ||||||||||||||||||||||||||||| |||| || |||| |||| ||||||||||| |||| |||||| || ||||||||||    
T  21067312 tcgtgcatgtatgagactgcatggttgaaggaagactaataataattatttggtactacatatatcaacaagatgcatcttcttt 21067396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 185
Target Start/End: Original strand, 21067765 - 21067841
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacat 185  Q
    |||||| ||||| ||||||||||||||| |||| ||||||||||||||||||| ||||||||| |||||| ||||||    
T  21067765 cgtgcaggtatgggactgcatggttgaaggaagacttataagaattgtttggtgctacctatatcaacaagatacat 21067841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 217
Target Start/End: Complemental strand, 53996216 - 53996114
Alignment:
Q  117 tatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaact 214  Q
    |||| |||| |||||||||| ||| |||||||| ||||||||||||||||||||| |||||| || |||||||||||| ||| | ||||  |||||||||    
T  53996216 tatgggactacatggttgaaggaatgcttataaaaattgtttggtactacctatatcaacaagattcatcttctttttggtatctcattccataagaact 53996117  T
Q  215 cca 217  Q
    |||    
T  53996116 cca 53996114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 193
Target Start/End: Complemental strand, 7678713 - 7678647
Alignment:
Q  127 catggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||| |||||||||||||||||||| ||||||||||||| |||||| || |||||||||||    
T  7678713 catggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttctttt 7678647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 14571823 - 14571741
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagta 198  Q
    ||||| |||| |||||||||| | | |||||||||||||||||||||||||||||| |||||| || ||||||||||| ||||    
T  14571823 gtatgggacttcatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagta 14571741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 29628769 - 29628707
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    |||||||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  29628769 gtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaacaa 29628707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 4127539 - 4127462
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| ||| |||||| |||| ||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  4127539 gtatgggactacatagttgaaggaagacttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 4127462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 193
Target Start/End: Original strand, 27026443 - 27026618
Alignment:
Q  16 agtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcat 115  Q
    |||| |||| |||||||||| ||||||||||||   ||||||| | ||| |||||||||| ||| |||||  |||||||||  || ||  ||  |||||     
T  27026443 agtggtcgtcggtgcacaaggcatgacaatgagcgactcctggtagcttttaggcaaaccgaat-cacatcagaatgagagggatattg-gacggtgcag 27026540  T
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| || | ||||| |||||||||||||||||||||| ||||||||||| |||||| || |||||| ||||    
T  27026541 gtatgggactacacgattgaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcatcttttttt 27026618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 178
Target Start/End: Original strand, 17028823 - 17028974
Alignment:
Q  26 ggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagact 125  Q
    |||||||||| ||||||||||||| |||||| ||| |||||||||||||  || |||||| ||||||||||  ||| | |   | |||||||||| ||||    
T  17028823 ggtgcacaaggcatgacaatgagaggctccttgcagcttctaggcaaactgaa-tcacatcggaatgagagggatcctgaagccttgcatgtatgggact 17028921  T
Q  126 gcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    |||| |||||| || |  || ||||||||||| ||| ||||||||| ||||||    
T  17028922 gcatagttgaaggaggatttgtaagaattgttaggtgctacctatatcaacaa 17028974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 51 - 178
Target Start/End: Original strand, 35871600 - 35871728
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| |||||||||||| |  | |||||| ||||||||||  ||| | ||  ||| || ||||| |||| |||||||||| |||||||||||     
T  35871600 gctcctggcatgcttctaggcaaaactgaatcacatcggaatgagagggatcctgaggccgtacaggtatgggacttcatggttgaaggaaggcttatat 35871699  T
Q  150 gaattgtttggtactacctataccaacaa 178  Q
    |||||||||||||| ||||||| ||||||    
T  35871700 gaattgtttggtaccacctatatcaacaa 35871728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 24629082 - 24628997
Alignment:
Q  116 gtatgagactgcatggttgaatgaa---ggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagta 198  Q
    ||||| |||||||||||| || |||   ||||||||||||||||||||||||||||||| |||||| || ||||||||||| ||||    
T  24629082 gtatgggactgcatggttaaaggaattaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagta 24628997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 87 - 194
Target Start/End: Original strand, 45682212 - 45682319
Alignment:
Q  87 ggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatc 186  Q
    ||||||||||| ||||| ||  | ||||| |||| |||| |||| ||||||||||| ||||||||||| ||||||| || |||||||||||| || |||     
T  45682212 ggaatgagagagatcttgaggccatgcatatatgggactacatgattgaatgaaggtttataagaattatttggtattatctataccaacaagatgcatt 45682311  T
Q  187 ttcttttt 194  Q
    ||||||||    
T  45682312 ttcttttt 45682319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 4185653 - 4185831
Alignment:
Q  16 agtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcat 115  Q
    ||||||||| | |||||||||||||| ||||||  |||| | ||| ||||||||  |||| |||||||||   ||||||||   || | ||  | ||||     
T  4185653 agtgatcgtcgttgcacaagacatgaaaatgagtggctcatagcagcttctaggtgaaccgaattcacatcaaaatgagagggttcatgaggccatgcag 4185752  T
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    ||||||||| |||||||| || |||  | ||||||||||||||| ||| || ||||||||||| || ||||||||||||    
T  4185753 gtatgagacggcatggttaaaggaatacatataagaattgtttgataccacatataccaacaagatgcatcttcttttt 4185831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 23976313 - 23976243
Alignment:
Q  124 ctgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    ||||||| ||||| ||||  ||||||||||||||||||||||||||||| ||||| || ||||||||||||    
T  23976313 ctgcatgattgaaggaagagttataagaattgtttggtactacctatactaacaagatgcatcttcttttt 23976243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 200
Target Start/End: Original strand, 41869902 - 41870040
Alignment:
Q  62 cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggt 161  Q
    |||||||||||| | || |||||| ||| ||||||  ||| | |||  || ||| |||| ||||||||| ||||| |||| |||||||||||||| || |    
T  41869902 cttctaggcaaaactaaatcacatcggagtgagagggatcctgagactgtacatatatgggactgcatgattgaaggaagacttataagaattgtatgat 41870001  T
Q  162 actacctataccaacaatatacatcttctttttagtaac 200  Q
    |||||||||| |||||| |  ||||||||||| ||||||    
T  41870002 actacctatatcaacaagacgcatcttcttttcagtaac 41870040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 1464185 - 1464262
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||| | ||| |||||| |||  ||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  1464185 gtatgagaatacatagttgaaagaaaacttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 1464262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 23943333 - 23943241
Alignment:
Q  127 catggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaactcca 217  Q
    |||||||||| |||| ||||||| || | |||||||||||||||| |||||| || |||||||||||| ||| ||||||  ||||||||||||    
T  23943333 catggttgaaggaagacttataaaaaatatttggtactacctatatcaacaagatgcatcttctttttggtagcacattccataagaactcca 23943241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 194
Target Start/End: Complemental strand, 43929072 - 43928987
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||||| ||||||||||   |||| ||| ||| ||||| ||||||||||||||||||| ||||||||||| || ||||||||||||    
T  43929072 cgtgcaggtatgagactatttggtcgaaggaaagcttacaagaattgtttggtactacatataccaacaagatgcatcttcttttt 43928987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 178
Target Start/End: Complemental strand, 24271743 - 24271590
Alignment:
Q  27 gtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatc--gtgcatgtatgagac 124  Q
    |||||||||||||| ||||||    |||||| |||||| |||| ||||| ||||||||| ||||||||||   || | || ||  ||||| |||||||||    
T  24271743 gtgcacaagacatggcaatgaacgactcctgacatcttttaggaaaaccgaattcacatcggaatgagagggttcctgaggtcgtgtgcaggtatgagac 24271644  T
Q  125 tgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    | ||||||| ||  ||| | |||||||||| |||| |||||||||||| |||||    
T  24271643 tacatggttaaagtaagacatataagaattatttgatactacctatacgaacaa 24271590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 27578556 - 27578482
Alignment:
Q  119 tgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||  ||||||||||| || ||||||||||| |||||| ||||||||| |||||| || |||||||||||    
T  27578556 tgagactgtgtggttgaatgatggtttataagaattatttggtgctacctatatcaacaagatgcatcttctttt 27578482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 27029317 - 27029392
Alignment:
Q  118 atgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||| || | ||||| |||| |||||||||||| ||||||||||| |||| |||||| || |||||||||||    
T  27029317 atgagactacacgattgaaggaagacttataagaattatttggtactacttatatcaacaagatgcatcttctttt 27029392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 53854909 - 53854858
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacc 167  Q
    ||||||||||  ||||||||| |||| |||||||||||||||||||||||||    
T  53854909 gtatgagactatatggttgaaggaagacttataagaattgtttggtactacc 53854858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 13614005 - 13613923
Alignment:
Q  110 gtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttt 192  Q
    ||||||| |||||||| |||||| ||| ||   ||||||||||||||||| ||| ||||||| |||||| || ||||||||||    
T  13614005 gtgcatgcatgagactccatggtagaaggagtacttataagaattgtttgataccacctatatcaacaagatgcatcttcttt 13613923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 17506418 - 17506484
Alignment:
Q  111 tgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaaca 177  Q
    ||||||||||||| |||||| || || |||| |||||||||||||| | |||||||||||| |||||    
T  17506418 tgcatgtatgagagtgcatgattaaaagaagacttataagaattgtatagtactacctatatcaaca 17506484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 20306241 - 20306191
Alignment:
Q  138 gaaggcttataagaattgtttggtactacctataccaacaatatacatctt 188  Q
    |||||||||||||||||||||||||||| ||||| |||||| || ||||||    
T  20306241 gaaggcttataagaattgtttggtactatctatatcaacaagatgcatctt 20306191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 116 - 198
Target Start/End: Complemental strand, 27579011 - 27578929
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagta 198  Q
    |||||| ||| | ||||||| ||||| |||||||||||||||||||||||| |||| |||  | | |||||||||||| ||||    
T  27579011 gtatgacactacttggttgactgaagacttataagaattgtttggtactacatatatcaattagacacatcttcttttcagta 27578929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 193
Target Start/End: Original strand, 13266088 - 13266201
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaat 179  Q
    ||||||| |||||||||  ||||| |   |||||| ||||| || |||||||||||| |||||||||||| |||| ||| ||||| |||||| ||| ||     
T  13266088 tcacattagaatgagagggatcttaaagccgtgcaggtatgggaatgcatggttgaaggaaggcttataataattttttagtactccctatatcaataag 13266187  T
Q  180 atacatcttctttt 193  Q
    || |||||| ||||    
T  13266188 atgcatcttatttt 13266201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 50814899 - 50814850
Alignment:
Q  144 ttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||||||||||||| ||||| |||||| || |||||||||||    
T  50814899 ttataagaattgtttggtactatctatatcaacaagatgcatcttctttt 50814850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 53391925 - 53391994
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacat 185  Q
    |||||||||||||||||||||  || |||||||| ||||||||| ||| | ||||| |||||| ||||||    
T  53391925 gtatgagactgcatggttgaagaaatgcttataaaaattgtttgataccatctatatcaacaagatacat 53391994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 42838661 - 42838733
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatctt 188  Q
    |||||||||| ||| ||| || |||| | ||||| ||||||||||||||||||||| |||||| || ||||||    
T  42838661 gtatgagactacatagttcaaggaagacgtataaaaattgtttggtactacctatatcaacaaaatgcatctt 42838733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 26200489 - 26200311
Alignment:
Q  16 agtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcat 115  Q
    |||| |||| |||||||||| ||||| || |||  ||| ||  || |||||||||||||  |||||||||  |||||||||  ||| | | || ||| |     
T  26200489 agtggtcgtcggtgcacaaggcatgataaagagtggcttctaacagcttctaggcaaactgaattcacatcagaatgagagggatcctgatattgtgtag 26200390  T
Q  116 gtatgagactgcatggttgaatga--aggcttataagaattgtttggtactacctataccaacaatatacatcttcttt 192  Q
    ||||| |||  |||||||||| ||  |||||||||| ||||||||| ||||| |||||| ||||| || ||| ||||||    
T  26200389 gtatgggacatcatggttgaaggaagaggcttataacaattgtttgatactaactatacaaacaagatgcatattcttt 26200311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 17505958 - 17506016
Alignment:
Q  105 agatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtac 163  Q
    ||||| |||| ||||||||||| |||||| ||||||| ||||||| |||||||| ||||    
T  17505958 agatcatgcacgtatgagactgtatggttaaatgaagtcttataaaaattgtttagtac 17506016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 33987261 - 33987164
Alignment:
Q  27 gtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagact 125  Q
    ||||||||| ||||||||||||   ||| ||||| |||||||||||||  || |||||| ||||||||||  ||| | |||||||||| ||||| ||||    
T  33987261 gtgcacaaggcatgacaatgagcgactcttggcagcttctaggcaaactgaa-tcacatcggaatgagagggatcatgagatcgtgcaggtatgtgact 33987164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 44831035 - 44831097
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    |||||||| | |||||||||| | | |||||||| ||||||||||||||||||| || |||||    
T  44831035 gtatgagattacatggttgaagggaagcttataaaaattgtttggtactacctaaactaacaa 44831097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 165
Target Start/End: Complemental strand, 2499703 - 2499647
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtacta 165  Q
    |||||| |||||||||| ||||||||||  ||  ||||||| |||||||||||||||    
T  2499703 cgtgcaggtatgagacttcatggttgaagcaacacttataaaaattgtttggtacta 2499647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 2166 - 2082
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  2166 cgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 2082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 193
Target Start/End: Original strand, 18997 - 19081
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  18997 cgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagattcatcttctttt 19081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 23704 - 23785
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttct 190  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || ||||||||    
T  23704 cgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttct 23785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 193
Target Start/End: Original strand, 105694 - 105835
Alignment:
Q  53 tcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataaga 151  Q
    ||||||||| |||||||||||| | || |||||| ||||||||||  ||| | ||  ||| || |||||  |||||| ||||||| ||||||||||||||    
T  105694 tcctggcatgcttctaggcaaaactaaatcacatcggaatgagagggatcctgaggccgtacaggtatggaactgcagggttgaaggaaggcttataaga 105793  T
Q  152 attgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||||||||||| |||||| || |||||||||||    
T  105794 attgtttggtactacctatatcaacaaaatgcatcttctttt 105835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 2325 - 2241
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||| ||||| |||| |||||||||| |||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  2325 cgtgcaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttctttt 2241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 51 - 193
Target Start/End: Original strand, 10272 - 10415
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| |||||||| ||| |  | |||||| ||||||||||  ||| | ||  |||||||||||| |||||||||||| || ||||||||||||    
T  10272 gctcctggcatgcttctaggtaaaactgaatcacatcggaatgagagggatcctgaggccgtgcatgtatgggactgcatggttcaaggaaggcttataa 10371  T
Q  150 gaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||||||| |||||||||||| |||||| || |||||| ||||    
T  10372 gaattgtttagtactacctatatcaacaagatgcatcttttttt 10415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 193
Target Start/End: Original strand, 1253 - 1335
Alignment:
Q  111 tgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||| || |||||||||||    
T  1253 tgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatataaacaagatgcatcttctttt 1335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 194
Target Start/End: Complemental strand, 142448 - 142304
Alignment:
Q  51 gctcctggcat-cttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataa 149  Q
    ||||||||||| |||||||| ||| |  | |||||| ||||||||||  ||| | ||  |||||| ||||| |||| |||||||||| ||| | ||||||    
T  142448 gctcctggcatgcttctaggaaaaactgaatcacatcggaatgagagggatcctgaggccgtgcaggtatgggacttcatggttgaaggaatgtttataa 142349  T
Q  150 gaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||||||||||||||||||||| |||||| || ||||||||||||    
T  142348 gaattgtttggtactacctatatcaacaagatgcatcttcttttt 142304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 193
Target Start/End: Original strand, 4594 - 4676
Alignment:
Q  111 tgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||| ||||| ||||||||||||||| ||||| ||| |||||||||||||||||||||||| |||||| || |||||||||||    
T  4594 tgcaggtatgggactgcatggttgaaggaaggtttagaagaattgtttggtactacctatatcaacaagatgcatcttctttt 4676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 193
Target Start/End: Original strand, 5049 - 5136
Alignment:
Q  111 tgcatgtatgagactgcatggttgaatgaaggctt-----ataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||| ||||| ||||||||||||||| ||||| ||     | ||||||||||||||||||||||||  ||||| || |||||||||||    
T  5049 tgcaggtatgggactgcatggttgaaggaaggtttaaaagagaagaattgtttggtactacctatattaacaagatgcatcttctttt 5136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 109 - 194
Target Start/End: Complemental strand, 4097 - 4012
Alignment:
Q  109 cgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||||| ||||| |||||||| |||||| ||| ||||||||||||||||||||||||||| || |||||| || ||||||||||||    
T  4097 cgtgcaggtatgggactgcattgttgaaggaatgcttataagaattgtttggtactacctgtatcaacaagatgcatcttcttttt 4012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 162786 - 162709
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||  ||||| || |||||||||||    
T  162786 gtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctatattaacaagatgcatcttctttt 162709  T

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Target: scaffold0022; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 69928 - 69862
Alignment:
Q  111 tgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaaca 177  Q
    |||| |||||||||||||| |||||| ||| |||||||| ||||||||||||||||||||| |||||    
T  69928 tgcaggtatgagactgcatcgttgaaggaatgcttataataattgtttggtactacctatatcaaca 69862  T

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Target: scaffold0020 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 107571 - 107494
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| ||||||||||||||| |||||||||||||||||||||| ||||||| ||| |||||| || |||||||||||    
T  107571 gtatgggactgcatggttgaaggaaggcttataagaattgtttgatactaccaatatcaacaagatgcatcttctttt 107494  T

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Target: scaffold0005 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 245124 - 245200
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttt 192  Q
    ||||| |||| |||||||||| | |||||||||||||||||||||||||||||||| |||||| || ||||||||||    
T  245124 gtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaacaagatgcatcttcttt 245200  T

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Target: scaffold0005; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 198
Target Start/End: Original strand, 245553 - 245635
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagta 198  Q
    ||||| |||| |||||||||| | | |||||||||||||||||||||||||||||| |||||| || ||||||||||| ||||    
T  245553 gtatgggacttcatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttcttttcagta 245635  T

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Target: scaffold0002 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 154795 - 154898
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacacatt--ataagaac 213  Q
    ||||| |||| |||||||||| |||||||||||||||||||| |||||||||| || |||||| || ||||||||||| |||| | ||||  ||||||||    
T  154795 gtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatcttcttttcagtagctcattccataagaac 154894  T
Q  214 tcca 217  Q
    ||||    
T  154895 tcca 154898  T

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Target: scaffold0168 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 2780 - 2857
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| |||||||||| |||||||||||||||||||| ||||||||||||| |||||| || ||| |||||||    
T  2780 gtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatattctttt 2857  T

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Target: scaffold0557 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 2154 - 2221
Alignment:
Q  127 catggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||  ||||| || ||||||||||||    
T  2154 catggttgaaggaaggcttataagaattgtttggtactccctatataaacaagatgcatcttcttttt 2221  T

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Target: scaffold0047 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 17706 - 17628
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttcttttt 194  Q
    ||||| |||| |||||||||| ||| |||||||||||||||||||||||||||||| |||||  ||  |||||||||||    
T  17706 gtatgggactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaggatgtatcttcttttt 17628  T

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Target: scaffold0047; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 193
Target Start/End: Complemental strand, 18242 - 18165
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    ||||| |||| ||| |||||| |||| ||||||||||||||||| ||||||||||| |||||| || |||||| ||||    
T  18242 gtatgtgactacatagttgaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatcttttttt 18165  T

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Target: scaffold0391 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 193
Target Start/End: Original strand, 14770 - 14856
Alignment:
Q  107 atcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttt 193  Q
    |||||||||||||  |||||||  |||||| ||| ||||||||||||||||||||| |||||||| ||| || || |||| ||||||    
T  14770 atcgtgcatgtataggactgcagtgttgaaggaatgcttataagaattgtttggtaatacctatatcaataagatgcatcgtctttt 14856  T

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Target: scaffold0101 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 178
Target Start/End: Original strand, 45389 - 45486
Alignment:
Q  80 tcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    |||||| |||||||||| | |||| ||| ||||||| |||| |||| ||| |||||| |||| ||||| |||||| |||||||||||||||| ||||||    
T  45389 tcacatcggaatgagagga-tcttgagaccgtgcatatatgtgactacattgttgaaggaagacttatgagaattatttggtactacctatatcaacaa 45486  T

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Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 217
Target Start/End: Original strand, 26022 - 26211
Alignment:
Q  30 cacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcatgtatgagactgcat 129  Q
    ||||| |||||||||||||  ||||||| || ||| ||||| |||| |||| ||||  ||| |||||  ||| | ||  |||||| || ||||||| |||    
T  26022 cacaatacatgacaatgagcggctcctgacagcttataggcgaaccgaatttacatcagaaagagagggatcctaaggccgtgcaggtgtgagacttcat 26121  T
Q  130 ggttgaatgaaggcttataagaattgtttggtactacctataccaacaatatacatcttctttttagtaacaca--ttataagaactcca 217  Q
    ||||| || | ||||||||  |||| ||||||||||| |||| |||||  || |||||||||||| ||| | ||  ||||||||||||||    
T  26122 ggttgcataatggcttatacaaattttttggtactacatatatcaacatgatgcatcttctttttggtagctcattttataagaactcca 26211  T

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Target: scaffold0036; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 16074 - 16135
Alignment:
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctataccaaca 177  Q
    |||||||| ||||| ||||||||| | ||| ||||||||||||||| ||| ||||| |||||    
T  16074 gtatgagattgcatagttgaatgatgacttgtaagaattgtttggtgctatctatatcaaca 16135  T

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Target: scaffold1126 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1126
Description:

Target: scaffold1126; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 1123 - 981
Alignment:
Q  16 agtgatcgttggtgcacaagacatgacaatgagaagctcctggcatcttctaggcaaaccaaattcacattggaatgagagaaatctttagatcgtgcat 115  Q
    |||||||||||||||||||||||||||||||||  ||| ||  || |||| | ||  ||| |||| ||||  |||||||||   |||| |||  |||||     
T  1123 agtgatcgttggtgcacaagacatgacaatgagcggctgctaacaacttccaagc-gaccgaatttacatcagaatgagagggttcttgagacagtgcag 1025  T
Q  116 gtatgagactgcatggttgaatgaaggcttataagaattgtttg 159  Q
     |||||||||||||||||||| |||| ||||||| |||| ||||    
T  1024 atatgagactgcatggttgaaagaagacttataataattttttg 981  T

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Target: scaffold0071 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Complemental strand, 44807 - 44767
Alignment:
Q  138 gaaggcttataagaattgtttggtactacctataccaacaa 178  Q
    ||||||||||||||||||||||||| ||||  |||||||||    
T  44807 gaaggcttataagaattgtttggtattaccggtaccaacaa 44767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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