View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17826_low_14 (Length: 307)

Name: NF17826_low_14
Description: NF17826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17826_low_14
NF17826_low_14
[»] chr4 (16 HSPs)
chr4 (15-55)||(15241477-15241517)
chr4 (15-49)||(4549889-4549923)
chr4 (15-53)||(5743659-5743697)
chr4 (15-53)||(30771527-30771565)
chr4 (15-53)||(34273219-34273257)
chr4 (15-53)||(47806859-47806897)
chr4 (15-53)||(52977981-52978019)
chr4 (15-52)||(4035825-4035862)
chr4 (15-52)||(4455060-4455097)
chr4 (15-52)||(5375557-5375594)
chr4 (15-52)||(9328240-9328277)
chr4 (15-52)||(32032993-32033030)
chr4 (15-52)||(33413518-33413555)
chr4 (15-52)||(44294789-44294826)
chr4 (15-52)||(45742806-45742843)
chr4 (16-52)||(26626003-26626039)
[»] chr8 (18 HSPs)
chr8 (15-53)||(36177103-36177141)
chr8 (15-52)||(43654203-43654240)
chr8 (15-55)||(51095-51135)
chr8 (15-54)||(39029176-39029215)
chr8 (15-53)||(1774341-1774379)
chr8 (15-53)||(2944272-2944310)
chr8 (15-53)||(28192175-28192213)
chr8 (15-53)||(37023284-37023322)
chr8 (15-52)||(5774048-5774085)
chr8 (15-52)||(7758909-7758946)
chr8 (15-52)||(8251933-8251970)
chr8 (15-52)||(8951428-8951465)
chr8 (15-52)||(13153928-13153965)
chr8 (15-52)||(18754144-18754181)
chr8 (15-52)||(28572046-28572083)
chr8 (15-52)||(28579639-28579676)
chr8 (15-52)||(32675757-32675794)
chr8 (15-52)||(34568490-34568527)
[»] chr7 (20 HSPs)
chr7 (15-52)||(25247690-25247727)
chr7 (15-52)||(34979077-34979114)
chr7 (15-53)||(26255095-26255133)
chr7 (15-53)||(39197717-39197755)
chr7 (15-52)||(6387325-6387362)
chr7 (15-52)||(12930318-12930355)
chr7 (15-52)||(18751982-18752019)
chr7 (15-52)||(19920563-19920600)
chr7 (15-52)||(21295151-21295188)
chr7 (15-52)||(29286037-29286074)
chr7 (15-52)||(32814433-32814470)
chr7 (15-52)||(32872375-32872412)
chr7 (15-52)||(33858866-33858903)
chr7 (15-52)||(36698131-36698168)
chr7 (15-52)||(38858298-38858335)
chr7 (15-52)||(39871613-39871650)
chr7 (16-53)||(40300229-40300266)
chr7 (15-52)||(41026096-41026133)
chr7 (15-52)||(41252361-41252398)
chr7 (15-52)||(48521029-48521066)
[»] chr5 (12 HSPs)
chr5 (15-52)||(15190815-15190852)
chr5 (15-53)||(1265948-1265986)
chr5 (15-52)||(3686754-3686791)
chr5 (15-52)||(6673228-6673265)
chr5 (16-53)||(7951561-7951598)
chr5 (15-52)||(9828393-9828430)
chr5 (15-52)||(14913648-14913685)
chr5 (15-52)||(16127259-16127296)
chr5 (15-52)||(22527692-22527729)
chr5 (15-52)||(26894873-26894910)
chr5 (15-52)||(40004409-40004446)
chr5 (16-52)||(34662204-34662240)
[»] chr3 (22 HSPs)
chr3 (15-52)||(26221288-26221325)
chr3 (15-52)||(50726783-50726820)
chr3 (15-52)||(50786028-50786065)
chr3 (16-55)||(4024049-4024088)
chr3 (15-58)||(10220927-10220970)
chr3 (15-54)||(26593765-26593804)
chr3 (15-53)||(14428609-14428647)
chr3 (15-53)||(21756485-21756523)
chr3 (15-53)||(30041017-30041055)
chr3 (15-53)||(46049986-46050024)
chr3 (15-52)||(7181350-7181387)
chr3 (15-52)||(9499497-9499534)
chr3 (15-52)||(12050392-12050429)
chr3 (15-52)||(22103929-22103966)
chr3 (15-52)||(25149122-25149159)
chr3 (15-52)||(35868083-35868120)
chr3 (15-52)||(37728713-37728750)
chr3 (15-52)||(43868103-43868140)
chr3 (15-52)||(44543782-44543819)
chr3 (15-52)||(45252773-45252810)
chr3 (15-52)||(51284062-51284099)
chr3 (19-55)||(52058982-52059018)
[»] scaffold0649 (1 HSPs)
scaffold0649 (15-47)||(4298-4330)
[»] chr2 (21 HSPs)
chr2 (15-55)||(8716892-8716932)
chr2 (15-53)||(2438224-2438262)
chr2 (15-53)||(7491843-7491881)
chr2 (15-53)||(16108475-16108513)
chr2 (15-53)||(27560205-27560243)
chr2 (19-53)||(29239332-29239366)
chr2 (19-52)||(1360055-1360088)
chr2 (15-52)||(11201683-11201720)
chr2 (15-52)||(11865289-11865326)
chr2 (15-52)||(13197645-13197682)
chr2 (15-52)||(17408294-17408331)
chr2 (15-52)||(20252210-20252247)
chr2 (15-52)||(26334845-26334882)
chr2 (15-52)||(34062665-34062702)
chr2 (15-52)||(34883848-34883885)
chr2 (15-52)||(36131028-36131065)
chr2 (15-52)||(40607702-40607739)
chr2 (18-55)||(40789091-40789128)
chr2 (15-52)||(41450516-41450553)
chr2 (20-52)||(8841397-8841429)
chr2 (15-55)||(8912874-8912914)
[»] chr6 (6 HSPs)
chr6 (15-53)||(231105-231143)
chr6 (15-53)||(34301832-34301870)
chr6 (15-52)||(4844400-4844437)
chr6 (15-52)||(7772176-7772213)
chr6 (15-52)||(8743188-8743225)
chr6 (15-52)||(30248647-30248684)
[»] chr1 (25 HSPs)
chr1 (15-53)||(943637-943675)
chr1 (15-53)||(15811232-15811270)
chr1 (18-52)||(16576095-16576129)
chr1 (15-53)||(30290264-30290302)
chr1 (15-53)||(39363194-39363232)
chr1 (15-53)||(44649628-44649666)
chr1 (15-53)||(49907020-49907058)
chr1 (15-52)||(1039381-1039418)
chr1 (15-52)||(1046287-1046324)
chr1 (15-52)||(4102714-4102751)
chr1 (19-52)||(7784258-7784291)
chr1 (15-52)||(11741397-11741434)
chr1 (15-52)||(18237094-18237131)
chr1 (15-52)||(23541979-23542016)
chr1 (19-52)||(30289602-30289635)
chr1 (15-52)||(36694854-36694891)
chr1 (15-52)||(36710955-36710992)
chr1 (15-52)||(37951949-37951986)
chr1 (15-52)||(39497433-39497470)
chr1 (15-52)||(45039412-45039449)
chr1 (15-52)||(46075867-46075904)
chr1 (15-52)||(50007975-50008012)
chr1 (15-52)||(52431174-52431211)
chr1 (15-51)||(30289862-30289898)
chr1 (15-47)||(45285810-45285842)
[»] scaffold0604 (1 HSPs)
scaffold0604 (15-52)||(3782-3819)
[»] scaffold0122 (1 HSPs)
scaffold0122 (15-52)||(12065-12102)
[»] scaffold0029 (1 HSPs)
scaffold0029 (15-52)||(51682-51719)
[»] scaffold0012 (1 HSPs)
scaffold0012 (15-52)||(47640-47677)
[»] scaffold0008 (1 HSPs)
scaffold0008 (15-52)||(259122-259159)


Alignment Details
Target: chr4 (Bit Score: 37; Significance: 0.000000000007; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 15241517 - 15241477
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaact 55  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  15241517 ttctcaaaagagtcttataattagggacggagggagtaact 15241477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 4549889 - 4549923
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggaggga 49  Q
    ||||||||||||||||||||| |||||||||||||    
T  4549889 ttctcaaaagagtcttataattagggacggaggga 4549923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 5743659 - 5743697
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  5743659 ttctcaaaagggtcttataattagggacggagggagtaa 5743697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 30771565 - 30771527
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  30771565 ttctcaaaagggtcttataattagggacggagggagtaa 30771527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 34273219 - 34273257
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  34273219 ttctcaaaagggtcttataattagggacggagggagtaa 34273257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 47806897 - 47806859
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  47806897 ttctcaaaagggtcttataattagggacggagggagtaa 47806859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 52978019 - 52977981
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  52978019 ttctcaaaagggtcttataattagggacggagggagtaa 52977981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 4035862 - 4035825
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  4035862 ttctcaaaagggtcttataattagggacggagggagta 4035825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 4455097 - 4455060
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  4455097 ttctcaaaagagtcttataattagggacggatggagta 4455060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 5375557 - 5375594
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  5375557 ttctcaaaagggtcttataattagggacggagggagta 5375594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 9328240 - 9328277
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  9328240 ttctcaaaagggtcttataattagggacggagggagta 9328277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 32032993 - 32033030
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  32032993 ttctcaaaagggtcttataattagggacggagggagta 32033030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 33413555 - 33413518
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  33413555 ttctcaaaagggtcttataattagggacggagggagta 33413518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 44294826 - 44294789
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  44294826 ttctcaaaagggtcttataattagggacggagggagta 44294789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 45742806 - 45742843
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  45742806 ttctcaaaagggtcttataattagggacggagggagta 45742843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 26626003 - 26626039
Alignment:
Q  16 tctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  26626003 tctcaaaagggtcttataattagggacggagggagta 26626039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.0000000001; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 36177103 - 36177141
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  36177103 ttctcaaaagagtcttataattagggacggagggagtaa 36177141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 43654203 - 43654240
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  43654203 ttctcaaaagagtcttataattagggacggagggagta 43654240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 51095 - 51135
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaact 55  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  51095 ttctcaaaagggtcttataattagggacggagggagtaact 51135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 39029215 - 39029176
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaac 54  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  39029215 ttctcaaaagggtcttataattagggacggagggagtaac 39029176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 1774379 - 1774341
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  1774379 ttctcaaaagggtcttataattagggacggagggagtaa 1774341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 2944272 - 2944310
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  2944272 ttctcaaaagggtcttataattagggacggagggagtaa 2944310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 28192175 - 28192213
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  28192175 ttctcaaaagggtcttataattagggacggagggagtaa 28192213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 37023284 - 37023322
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  37023284 ttctcaaaagagtcttataattagggacggaggcagtaa 37023322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 5774085 - 5774048
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  5774085 ttctcaaaagagtcttataattagggacggaggtagta 5774048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 7758909 - 7758946
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  7758909 ttctcaaaagtgtcttataattagggacggagggagta 7758946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 8251933 - 8251970
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  8251933 ttctcaaaagggtcttataattagggacggagggagta 8251970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 8951428 - 8951465
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  8951428 ttctcaaaagggtcttataattagggacggagggagta 8951465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 13153965 - 13153928
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  13153965 ttctcaaaagggtcttataattagggacggagggagta 13153928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 18754181 - 18754144
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  18754181 ttctcaaaagggtcttataattagggacggagggagta 18754144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 28572083 - 28572046
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  28572083 ttctcaaaagggtcttataattagggacggagggagta 28572046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 28579676 - 28579639
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  28579676 ttctcaaaagggtcttataattagggacggagggagta 28579639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 32675757 - 32675794
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  32675757 ttctcaaaagggtcttataattagggacggagggagta 32675794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 34568527 - 34568490
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  34568527 ttctcaaaagggtcttataattagggacggagggagta 34568490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000004; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 25247690 - 25247727
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  25247690 ttctcaaaagagtcttataattagggacggagggagta 25247727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 34979077 - 34979114
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  34979077 ttctcaaaagagtcttataattagggacggagggagta 34979114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 26255133 - 26255095
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  26255133 ttctcaaaagggtcttataattagggacggagggagtaa 26255095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 39197755 - 39197717
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  39197755 ttctcaaaagggtcttataattagggacggagggagtaa 39197717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 6387362 - 6387325
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||||||| || |||||||||||||    
T  6387362 ttctcaaaagagtcttataattagagacggagggagta 6387325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 12930355 - 12930318
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  12930355 ttctcaaaagagtcttataattagggacggaggtagta 12930318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 18751982 - 18752019
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  18751982 ttctcaaaagagtcttataattagggacggaggtagta 18752019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 19920600 - 19920563
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  19920600 ttctcaaaagggtcttataattagggacggagggagta 19920563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 21295188 - 21295151
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  21295188 ttctcaaaagggtcttataattagggacggagggagta 21295151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 29286037 - 29286074
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  29286037 ttctcaaaagggtcttataattagggacggagggagta 29286074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 32814470 - 32814433
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  32814470 ttctcaaaagggtcttataattagggacggagggagta 32814433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 32872375 - 32872412
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  32872375 ttctcaaaagggtcttataattagggacggagggagta 32872412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 33858866 - 33858903
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  33858866 ttctcaaaagggtcttataattagggacggagggagta 33858903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 36698131 - 36698168
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  36698131 ttctcaaaagggtcttataattagggacggagggagta 36698168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 38858335 - 38858298
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  38858335 ttctcaaaagggtcttataattagggacggagggagta 38858298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 39871613 - 39871650
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  39871613 ttctcaaaagggtcttataattagggacggagggagta 39871650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 40300266 - 40300229
Alignment:
Q  16 tctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  40300266 tctcaaaagggtcttataattagggacggagggagtaa 40300229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 41026096 - 41026133
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  41026096 ttctcaaaagggtcttataattagggacggagggagta 41026133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 41252361 - 41252398
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  41252361 ttctcaaaagggtcttataattagggacggagggagta 41252398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 48521066 - 48521029
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  48521066 ttctcaaaagggtcttataattagggacggagggagta 48521029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 15190815 - 15190852
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  15190815 ttctcaaaagagtcttataattagggacggagggagta 15190852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 1265986 - 1265948
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  1265986 ttctcaaaagggtcttataattagggacggagggagtaa 1265948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 3686754 - 3686791
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  3686754 ttctcaaaagagtcttataattagggacggaaggagta 3686791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 6673228 - 6673265
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  6673228 ttctcaaaagggtcttataattagggacggagggagta 6673265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 7951598 - 7951561
Alignment:
Q  16 tctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  7951598 tctcaaaagggtcttataattagggacggagggagtaa 7951561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 9828430 - 9828393
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  9828430 ttctcaaaagggtcttataattagggacggagggagta 9828393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 14913685 - 14913648
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  14913685 ttctcaaaagggtcttataattagggacggagggagta 14913648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 16127296 - 16127259
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  16127296 ttctcaaaagggtcttataattagggacggagggagta 16127259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 22527729 - 22527692
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  22527729 ttctcaaaagggtcttataattagggacggagggagta 22527692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 26894873 - 26894910
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  26894873 ttctcaaaagggtcttataattagggacggagggagta 26894910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 40004409 - 40004446
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  40004409 ttctcaaaagggtcttataattagggacggagggagta 40004446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 34662240 - 34662204
Alignment:
Q  16 tctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  34662240 tctcaaaagggtcttataattagggacggagggagta 34662204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000004; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 26221325 - 26221288
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  26221325 ttctcaaaagagtcttataattagggacggagggagta 26221288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 50726783 - 50726820
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||||||||||||||||||||    
T  50726783 ttctcaaaagggtcttataatcagggacggagggagta 50726820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 50786065 - 50786028
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||||||||||||||||||||    
T  50786065 ttctcaaaagggtcttataatcagggacggagggagta 50786028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 4024088 - 4024049
Alignment:
Q  16 tctcaaaagagtcttataatcagggacggagggagtaact 55  Q
    ||||||||| |||||||||| |||||||||||||||||||    
T  4024088 tctcaaaagggtcttataattagggacggagggagtaact 4024049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 10220970 - 10220927
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaactgat 58  Q
    |||||||||| |||||||||| ||||||||||||||||| ||||    
T  10220970 ttctcaaaagggtcttataattagggacggagggagtaattgat 10220927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 26593765 - 26593804
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaac 54  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  26593765 ttctcaaaagggtcttataattagggacggagggagtaac 26593804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 14428647 - 14428609
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  14428647 ttctcaaaagggtcttataattagggacggagggagtaa 14428609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 21756523 - 21756485
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  21756523 ttctcaaaagggtcttataattagggacggagggagtaa 21756485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 30041017 - 30041055
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  30041017 ttctcaaaagagtcttataattaggaacggagggagtaa 30041055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 46049986 - 46050024
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  46049986 ttctcaaaagggtcttataattagggacggagggagtaa 46050024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 7181387 - 7181350
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  7181387 ttctcaaaagggtcttataattagggacggagggagta 7181350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 9499497 - 9499534
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  9499497 ttctcaaaagggtcttataattagggacggagggagta 9499534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 12050392 - 12050429
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  12050392 ttctcaaaagggtcttataattagggacggagggagta 12050429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 22103929 - 22103966
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  22103929 ttctcaaaagggtcttataattagggacggagggagta 22103966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 25149122 - 25149159
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  25149122 ttctcaaaagggtcttataattagggacggagggagta 25149159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 35868083 - 35868120
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  35868083 ttctcaaaagggtcttataattagggacggagggagta 35868120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 37728750 - 37728713
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  37728750 ttctcaaaagggtcttataattagggacggagggagta 37728713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 43868140 - 43868103
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  43868140 ttctcaaaagggtcttataattagggacggagggagta 43868103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 44543819 - 44543782
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  44543819 ttctcaaaagggtcttataattagggacggagggagta 44543782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 45252810 - 45252773
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  45252810 ttctcaaaagggtcttataattagggacggagggagta 45252773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 51284062 - 51284099
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  51284062 ttctcaaaagggtcttataattagggacggagggagta 51284099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 52059018 - 52058982
Alignment:
Q  19 caaaagagtcttataatcagggacggagggagtaact 55  Q
    |||||| |||||||||| |||||||||||||||||||    
T  52059018 caaaagggtcttataattagggacggagggagtaact 52058982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0649 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 4298 - 4330
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagg 47  Q
    |||||||||||||||||||||||||||||||||    
T  4298 ttctcaaaagagtcttataatcagggacggagg 4330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 8716892 - 8716932
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaact 55  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  8716892 ttctcaaaagggtcttataattagggacggagggagtaact 8716932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 2438262 - 2438224
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  2438262 ttctcaaaagggtcttataattagggacggagggagtaa 2438224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 7491881 - 7491843
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  7491881 ttctcaaaagggtcttataattagggacggagggagtaa 7491843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 16108475 - 16108513
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  16108475 ttctcaaaagaatcttataattagggacggagggagtaa 16108513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 27560243 - 27560205
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  27560243 ttctcaaaagggtcttataattagggacggagggagtaa 27560205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 29239366 - 29239332
Alignment:
Q  19 caaaagagtcttataatcagggacggagggagtaa 53  Q
    ||||||||||||||||| |||||||||||||||||    
T  29239366 caaaagagtcttataattagggacggagggagtaa 29239332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 1360055 - 1360088
Alignment:
Q  19 caaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||| ||||||||||||||||    
T  1360055 caaaagagtcttataattagggacggagggagta 1360088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 11201720 - 11201683
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  11201720 ttctcaaaagggtcttataattagggacggagggagta 11201683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 11865289 - 11865326
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  11865289 ttctcaaaagagtcttataattagggacggaggtagta 11865326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 13197645 - 13197682
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  13197645 ttctcaaaagaatcttataattagggacggagggagta 13197682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 17408294 - 17408331
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  17408294 ttctcaaaagggtcttataattagggacggagggagta 17408331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 20252247 - 20252210
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  20252247 ttctcaaaagggtcttataattagggacggagggagta 20252210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 26334845 - 26334882
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  26334845 ttctcaaaagagtcttataattagggacggaggtagta 26334882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 34062665 - 34062702
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  34062665 ttctcaaaagggtcttataattagggacggagggagta 34062702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 34883848 - 34883885
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  34883848 ttctcaaaagggtcttataattagggacggagggagta 34883885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 36131028 - 36131065
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  36131028 ttctcaaaagggtcttataattagggacggagggagta 36131065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 40607739 - 40607702
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  40607739 ttctcaaaagggtcttataattagggacggagggagta 40607702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 40789091 - 40789128
Alignment:
Q  18 tcaaaagagtcttataatcagggacggagggagtaact 55  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  40789091 tcaaaagagtcttataattagggacggaggtagtaact 40789128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 41450553 - 41450516
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  41450553 ttctcaaaagggtcttataattagggacggagggagta 41450516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 8841429 - 8841397
Alignment:
Q  20 aaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||||||||| ||||||||||||||||    
T  8841429 aaaagagtcttataattagggacggagggagta 8841397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 8912874 - 8912914
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaact 55  Q
    |||||||||| |||||||||| ||||||||||| |||||||    
T  8912874 ttctcaaaagggtcttataattagggacggaggtagtaact 8912914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000003; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 231105 - 231143
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  231105 ttctcaaaagggtcttataattagggacggagggagtaa 231143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 34301832 - 34301870
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  34301832 ttctcaaaagggtcttataattagggacggagggagtaa 34301870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 4844437 - 4844400
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  4844437 ttctcaaaagggtcttataattagggacggagggagta 4844400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 7772213 - 7772176
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  7772213 ttctcaaaagagtcttataattagggacggaggtagta 7772176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 8743225 - 8743188
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  8743225 ttctcaaaagggtcttataattagggacggagggagta 8743188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 30248684 - 30248647
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  30248684 ttctcaaaagggtcttataattagggacggagggagta 30248647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000003; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 943637 - 943675
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  943637 ttctcaaaagggtcttataattagggacggagggagtaa 943675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 15811232 - 15811270
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  15811232 ttctcaaaagggtcttataattagggacggagggagtaa 15811270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 16576095 - 16576129
Alignment:
Q  18 tcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||||||||||| ||||||||||||||||    
T  16576095 tcaaaagagtcttataattagggacggagggagta 16576129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 30290302 - 30290264
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  30290302 ttctcaaaagggtcttataattagggacggagggagtaa 30290264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 39363194 - 39363232
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  39363194 ttctcaaaagggtcttataattagggacggagggagtaa 39363232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 44649666 - 44649628
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  44649666 ttctcaaaagggtcttataattagggacggagggagtaa 44649628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 49907058 - 49907020
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagtaa 53  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  49907058 ttctcaaaagggtcttataattagggacggagggagtaa 49907020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 1039381 - 1039418
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  1039381 ttctcaaaagggtcttataattagggacggagggagta 1039418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 1046287 - 1046324
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  1046287 ttctcaaaagggtcttataattagggacggagggagta 1046324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 4102714 - 4102751
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  4102714 ttctcaaaagggtcttataattagggacggagggagta 4102751  T

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Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 7784258 - 7784291
Alignment:
Q  19 caaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||| ||||||||||||||||    
T  7784258 caaaagagtcttataattagggacggagggagta 7784291  T

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Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 11741434 - 11741397
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  11741434 ttctcaaaagggtcttataattagggacggagggagta 11741397  T

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Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 18237131 - 18237094
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  18237131 ttctcaaaagagtcttataattagggacggaggtagta 18237094  T

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Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 23542016 - 23541979
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  23542016 ttctcaaaagggtcttataattagggacggagggagta 23541979  T

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Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 30289635 - 30289602
Alignment:
Q  19 caaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||| ||||||||||||||||    
T  30289635 caaaagagtcttataattagggacggagggagta 30289602  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 36694891 - 36694854
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  36694891 ttctcaaaagggtcttataattagggacggagggagta 36694854  T

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Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 36710992 - 36710955
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  36710992 ttctcaaaagggtcttataattagggacggagggagta 36710955  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 37951949 - 37951986
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  37951949 ttctcaaaagggtcttataattagggacggagggagta 37951986  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 39497470 - 39497433
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  39497470 ttctcaaaagggtcttataattagggacggagggagta 39497433  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 45039449 - 45039412
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  45039449 ttctcaaaagggtcttataattagggacggagggagta 45039412  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 46075867 - 46075904
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  46075867 ttctcaaaagggtcttataattagggacggagggagta 46075904  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 50008012 - 50007975
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  50008012 ttctcaaaagagtcttataattagggacagagggagta 50007975  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 52431174 - 52431211
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  52431174 ttctcaaaagggtcttataattagggacggagggagta 52431211  T

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Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 30289862 - 30289898
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagt 51  Q
    |||||||||| |||||||||| |||||||||||||||    
T  30289862 ttctcaaaagggtcttataattagggacggagggagt 30289898  T

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Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 45285810 - 45285842
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagg 47  Q
    ||||||||||||||||||||| |||||||||||    
T  45285810 ttctcaaaagagtcttataattagggacggagg 45285842  T

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Target: scaffold0604 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 3782 - 3819
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  3782 ttctcaaaagggtcttataattagggacggagggagta 3819  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 12102 - 12065
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  12102 ttctcaaaagggtcttataattagggacggagggagta 12065  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 51682 - 51719
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  51682 ttctcaaaagggtcttataattagggacggagggagta 51719  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 47677 - 47640
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  47677 ttctcaaaagggtcttataattagggacggagggagta 47640  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 259122 - 259159
Alignment:
Q  15 ttctcaaaagagtcttataatcagggacggagggagta 52  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  259122 ttctcaaaagggtcttataattagggacggagggagta 259159  T

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