View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17826_low_18 (Length: 280)
Name: NF17826_low_18
Description: NF17826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17826_low_18 |
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Alignment Details
Target: chr3 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 51110959 - 51111222
Alignment:
| Q |
1 |
gttgatgcaattgttcttaatgagttctcaaaattagctgaggcacatgcttagatgacagctcttctcaattgaacgatcaccatctgccaccgattca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51110959 |
gttgatgcaattgttcttaatgagttctcaaaattagctgaggcacatgcttagatgacagctcttctcaattgaacgatcaccatctgccaccgattca |
51111058 |
T |
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| Q |
101 |
acgttcaagaaatccagtcaattatcactcggtctcctttgatcctgcttcgttatatatgttgtcgttgttgtctcgaagtttatcaggatgcaggcac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51111059 |
acgttcaagaaatccagtcaattatcactcggtctcctttgatcctgcttcgttatatatgttgtcgttgttgtctcgaagtttatcaggatgcaggcac |
51111158 |
T |
|
| Q |
201 |
attgcagtgggaaagcacaaaatcagcctaagtttttgcaacaattaaatgacaatggaattat |
264 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51111159 |
attgcagtgggaaagcacaaaatcagcctaagtttttgcaacaattaaatgacaatggaattat |
51111222 |
T |
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