View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17828_low_10 (Length: 467)
Name: NF17828_low_10
Description: NF17828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17828_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 438; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 438; E-Value: 0
Query Start/End: Original strand, 1 - 445
Target Start/End: Original strand, 95878 - 96323
Alignment:
| Q |
1 |
tacaattaacaacaaaacaattcttcctcttaaacaacttgacgaactcgaaaaggctacaagggtagggtaatttattaacattctttctcatttcacc |
100 |
Q |
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| T |
95878 |
tacaattaacaacaaaacaattcttcctcttaaacaacttgacgaactcgaaaaggctacaagggtagggtaatttattaacattctttctcatttcacc |
95977 |
T |
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| Q |
101 |
tttttagggtttcttactttgtttctaatttgaaaattccaggagatgcaagacatgagggactgctatgataccttactttccgcagcggccgcaaccg |
200 |
Q |
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| T |
95978 |
tttttagggtttcttactttgtttctaatttgaaaattccaggagatgcaagacatgagggactgctatgataccttactttccgcagcggccgcaaccg |
96077 |
T |
|
| Q |
201 |
ccagtagtgcttatggtatttt-tctattcatttagaaatgattaccgcaactatgtgaattatgtaatgatcatgtagtaattatacagaattcgctga |
299 |
Q |
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| T |
96078 |
ccagtagtgcttatggtattttttctattcatttagaaatgattaccgcaactatgtgaattatgtaatgatcatgtagtaattatacagaattcgctga |
96177 |
T |
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| Q |
300 |
gtcgttgcgggacatgggttcttgtttactcgagaaaactgctttgaatgatcacgaagaagaaactggtaggtaccacttcttgttgcttcactaacct |
399 |
Q |
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| T |
96178 |
gtcgttgcgggacatgggttcttgtttactcgagaaaactgctttgaatgatcacgaagaagaaactggtaggtaccacttcttgttgcttcactaacct |
96277 |
T |
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| Q |
400 |
ctttctaactttacttaactacttattctgtttctgcaggaaaggt |
445 |
Q |
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| T |
96278 |
ctttctaactttacttaactacttattctgtttctgcaggaaaggt |
96323 |
T |
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