View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17828_low_18 (Length: 370)
Name: NF17828_low_18
Description: NF17828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17828_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 22605548 - 22605876
Alignment:
| Q |
1 |
attttttgcttataattaaatctaaatggagtacatgattatttttcaaagactatatgatcactattgaaaagaatagaatcataatttataggtattt |
100 |
Q |
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| T |
22605548 |
attttttgcttacaattaaatctaaatggagtacatgattatttt-caaagattatatgatcactattggatagaatagaatcataatttataggtattt |
22605646 |
T |
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| Q |
101 |
cttctaaatttttgttgataattattttcaaataatgaataactccaaag---ttgattagtgtgtatcctaaccctactactattaacttcaaaatgaa |
197 |
Q |
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| T |
22605647 |
cttctatatttttgttgctaattattttcaaataatgaataactccaaagaagttgattagtgtgtaccctaaccctactactattaacttcaaaatgaa |
22605746 |
T |
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| Q |
198 |
atttgatttatgagattaatacttaagaaagcatagtctcaattaattattttcttgaccaggaggaattgctttctagaatctatactaattatggatt |
297 |
Q |
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| T |
22605747 |
atttgatttatgagattaatacttaagaaagcatagtctcaattaattattttcttgaccaggaggaattgctttctagaatctatactaattatggatt |
22605846 |
T |
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| Q |
298 |
tattagtttgtaagaattgtttaatgacct |
327 |
Q |
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|||||||||||||||||||||| ||||||| |
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| T |
22605847 |
tattagtttgtaagaattgttttatgacct |
22605876 |
T |
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