View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17828_low_4 (Length: 551)

Name: NF17828_low_4
Description: NF17828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17828_low_4
NF17828_low_4
[»] chr5 (26 HSPs)
chr5 (1-551)||(14705777-14706327)
chr5 (75-123)||(36796628-36796676)
chr5 (87-123)||(499652-499688)
chr5 (75-126)||(10771806-10771857)
chr5 (79-126)||(11615572-11615619)
chr5 (75-126)||(19177546-19177597)
chr5 (77-123)||(17369306-17369352)
chr5 (79-125)||(27153259-27153305)
chr5 (75-123)||(13508541-13508589)
chr5 (75-127)||(31723906-31723958)
chr5 (77-123)||(20982133-20982179)
chr5 (77-123)||(34198524-34198570)
chr5 (81-123)||(42034167-42034209)
chr5 (82-123)||(14331474-14331515)
chr5 (77-199)||(14714683-14714810)
chr5 (75-132)||(40335785-40335842)
chr5 (86-123)||(41419431-41419468)
chr5 (86-123)||(41534550-41534587)
chr5 (75-119)||(4855796-4855840)
chr5 (91-123)||(14932413-14932445)
chr5 (83-123)||(28578954-28578994)
chr5 (75-123)||(32194013-32194061)
chr5 (75-127)||(33961784-33961836)
chr5 (77-129)||(35135567-35135619)
chr5 (77-133)||(37968980-37969035)
chr5 (87-123)||(39594920-39594956)
[»] chr1 (33 HSPs)
chr1 (75-124)||(29793618-29793667)
chr1 (77-126)||(5157175-5157224)
chr1 (75-123)||(4757439-4757487)
chr1 (75-123)||(6292593-6292641)
chr1 (75-130)||(33723296-33723351)
chr1 (77-122)||(10199330-10199375)
chr1 (74-119)||(15515656-15515701)
chr1 (75-127)||(9602571-9602623)
chr1 (93-125)||(18403126-18403158)
chr1 (75-123)||(24460322-24460370)
chr1 (75-123)||(48748516-48748564)
chr1 (79-122)||(2522701-2522744)
chr1 (75-118)||(25944542-25944585)
chr1 (76-119)||(32958739-32958782)
chr1 (77-128)||(51929378-51929429)
chr1 (75-129)||(3597196-3597250)
chr1 (75-113)||(43420359-43420397)
chr1 (78-122)||(6279503-6279547)
chr1 (75-123)||(6659781-6659829)
chr1 (75-123)||(7217995-7218043)
chr1 (75-123)||(15558312-15558360)
chr1 (75-123)||(15784897-15784945)
chr1 (81-125)||(18327065-18327109)
chr1 (75-119)||(28837278-28837322)
chr1 (84-124)||(30257794-30257834)
chr1 (83-123)||(30259407-30259447)
chr1 (75-123)||(33976279-33976327)
chr1 (75-123)||(34536259-34536307)
chr1 (75-119)||(35017683-35017727)
chr1 (87-123)||(41505787-41505823)
chr1 (75-123)||(44115826-44115874)
chr1 (87-131)||(48282235-48282279)
chr1 (75-123)||(52013988-52014036)
[»] chr7 (23 HSPs)
chr7 (78-126)||(32730166-32730214)
chr7 (76-122)||(529464-529510)
chr7 (81-123)||(47046029-47046071)
chr7 (86-123)||(30812250-30812287)
chr7 (77-129)||(3836598-3836650)
chr7 (75-127)||(8427114-8427166)
chr7 (75-123)||(47041960-47042008)
chr7 (76-123)||(1418521-1418568)
chr7 (87-126)||(9210934-9210973)
chr7 (78-123)||(5276594-5276639)
chr7 (78-123)||(7513663-7513708)
chr7 (87-128)||(19302479-19302520)
chr7 (84-121)||(46946017-46946054)
chr7 (87-123)||(11619079-11619115)
chr7 (75-127)||(12234806-12234858)
chr7 (75-123)||(23214956-23215004)
chr7 (75-123)||(29363609-29363657)
chr7 (81-133)||(31341242-31341294)
chr7 (87-123)||(33266407-33266443)
chr7 (87-123)||(33673190-33673226)
chr7 (80-124)||(33871347-33871391)
chr7 (75-123)||(40598406-40598454)
chr7 (75-127)||(44289960-44290012)
[»] chr4 (26 HSPs)
chr4 (75-122)||(1017129-1017176)
chr4 (60-123)||(24193618-24193681)
chr4 (75-126)||(32420976-32421027)
chr4 (75-125)||(18628472-18628522)
chr4 (75-119)||(18512440-18512484)
chr4 (87-123)||(27043751-27043787)
chr4 (75-139)||(56186803-56186867)
chr4 (75-130)||(22845620-22845674)
chr4 (77-123)||(1075561-1075607)
chr4 (75-125)||(19305027-19305077)
chr4 (77-123)||(28259376-28259422)
chr4 (75-123)||(7367975-7368023)
chr4 (87-126)||(8420908-8420948)
chr4 (82-122)||(10365883-10365923)
chr4 (87-123)||(15173224-15173260)
chr4 (87-123)||(17822786-17822822)
chr4 (79-123)||(17975258-17975302)
chr4 (75-123)||(19429391-19429439)
chr4 (75-123)||(28615435-28615483)
chr4 (75-123)||(32071964-32072012)
chr4 (87-123)||(42403944-42403980)
chr4 (75-123)||(44320050-44320098)
chr4 (75-127)||(47146045-47146097)
chr4 (87-123)||(49940088-49940124)
chr4 (75-119)||(54277248-54277292)
chr4 (75-123)||(55870263-55870311)
[»] chr3 (17 HSPs)
chr3 (75-127)||(22667504-22667556)
chr3 (75-127)||(22724143-22724195)
chr3 (75-123)||(20210849-20210897)
chr3 (75-123)||(21872216-21872264)
chr3 (88-123)||(26990146-26990181)
chr3 (79-126)||(41848634-41848681)
chr3 (76-123)||(51929843-51929890)
chr3 (87-129)||(16072956-16072998)
chr3 (77-123)||(31512486-31512532)
chr3 (87-124)||(26911704-26911741)
chr3 (75-120)||(33965412-33965457)
chr3 (75-123)||(20173811-20173859)
chr3 (77-125)||(24158435-24158483)
chr3 (87-123)||(25447166-25447202)
chr3 (75-123)||(32663739-32663787)
chr3 (75-123)||(37138383-37138431)
chr3 (75-123)||(44014719-44014767)
[»] chr2 (26 HSPs)
chr2 (75-123)||(13866979-13867027)
chr2 (75-123)||(22878199-22878247)
chr2 (79-128)||(43985314-43985363)
chr2 (79-119)||(3458700-3458740)
chr2 (75-123)||(15370244-15370292)
chr2 (75-127)||(28803447-28803499)
chr2 (75-123)||(40759261-40759309)
chr2 (83-123)||(40837358-40837398)
chr2 (75-123)||(41170711-41170759)
chr2 (76-123)||(18525162-18525209)
chr2 (76-123)||(28810373-28810420)
chr2 (75-126)||(40158819-40158870)
chr2 (78-112)||(29430862-29430896)
chr2 (78-123)||(1830143-1830188)
chr2 (78-123)||(8017538-8017583)
chr2 (75-124)||(21616580-21616629)
chr2 (74-123)||(26372648-26372697)
chr2 (86-119)||(41516949-41516982)
chr2 (79-123)||(3078529-3078573)
chr2 (87-123)||(18179062-18179098)
chr2 (87-123)||(27317492-27317528)
chr2 (87-123)||(30331864-30331900)
chr2 (75-123)||(35329739-35329787)
chr2 (87-123)||(40059382-40059418)
chr2 (87-123)||(40085282-40085318)
chr2 (75-123)||(40851699-40851747)
[»] chr8 (29 HSPs)
chr8 (76-123)||(4560604-4560651)
chr8 (74-121)||(10560147-10560194)
chr8 (79-144)||(34290974-34291039)
chr8 (79-127)||(1821934-1821982)
chr8 (79-127)||(1856379-1856427)
chr8 (75-123)||(7714343-7714391)
chr8 (75-123)||(9700102-9700150)
chr8 (75-123)||(18331815-18331863)
chr8 (77-125)||(22705031-22705079)
chr8 (87-123)||(38602440-38602476)
chr8 (77-123)||(2606152-2606198)
chr8 (81-123)||(8060775-8060817)
chr8 (75-129)||(43368615-43368669)
chr8 (75-124)||(1561378-1561427)
chr8 (75-120)||(6950423-6950468)
chr8 (75-119)||(1892149-1892193)
chr8 (75-123)||(2487929-2487977)
chr8 (75-123)||(7008699-7008747)
chr8 (75-123)||(10488564-10488612)
chr8 (75-123)||(14926903-14926951)
chr8 (75-123)||(16162861-16162909)
chr8 (75-127)||(20186381-20186433)
chr8 (75-127)||(20205448-20205500)
chr8 (81-129)||(29168776-29168824)
chr8 (87-123)||(30251375-30251411)
chr8 (79-123)||(32976478-32976522)
chr8 (75-119)||(39881646-39881690)
chr8 (75-127)||(43393689-43393741)
chr8 (87-127)||(43717851-43717891)
[»] chr6 (16 HSPs)
chr6 (77-123)||(13908343-13908389)
chr6 (77-123)||(31776193-31776239)
chr6 (75-123)||(8420117-8420166)
chr6 (75-127)||(12111068-12111120)
chr6 (75-118)||(6742912-6742955)
chr6 (75-118)||(7351597-7351640)
chr6 (75-129)||(2732160-2732216)
chr6 (77-122)||(17241082-17241127)
chr6 (75-124)||(26559159-26559208)
chr6 (75-123)||(738462-738510)
chr6 (77-113)||(3750100-3750136)
chr6 (75-123)||(4325226-4325274)
chr6 (75-123)||(8010458-8010506)
chr6 (75-123)||(10016724-10016772)
chr6 (87-123)||(20861619-20861655)
chr6 (87-123)||(21405075-21405111)
[»] scaffold0020 (1 HSPs)
scaffold0020 (77-123)||(159894-159940)


Alignment Details
Target: chr5 (Bit Score: 519; Significance: 0; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 519; E-Value: 0
Query Start/End: Original strand, 1 - 551
Target Start/End: Complemental strand, 14706327 - 14705777
Alignment:
Q  1 gtaagttatccctatgagtttatggagataattaagttgaaaagagcttatacaactctccaaatagtttcacttctcacaagtgtttatgtcagtaggt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  14706327 gtaagttatccctatgagtttatggagataattaagttgaaaagagcttatacaactcttcaaatagtttcacatctcacaagtgtttatgtcagtaggt 14706228  T
Q  101 aagctcaaataagtcaatccaaataggtctttagtttcacaatttgttttgggtgccattattttgtagtaattggtctccggaatgctttggctatgac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14706227 aagctcaaataagtcaatccaaataggtctttagtttcacaatttgttttgggtgccattattttgtagtaattggtctccggaatgctttggctatgac 14706128  T
Q  201 cataattttgtatccaatttcttcttgtagtagcatgattatatttgtttgaatgttgatgttttccttaaaattgcacttttgtgtagtatatgactat 300  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14706127 cataattttgtattcaatttcgtcttgtagtagcatgattatatttgtttcaatgttgatgttttccttaaaattgcacttttgtgtagtatatgactat 14706028  T
Q  301 atgttgtggatgagcacggtaacttgaagcagttttaagattaaacaatgatcataatttatgaatttgtttgcttttagcttaactttttaagaagtga 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14706027 atgttgtggatgagcacggtaacttgaagcagttttaagattaaacaatgatcataatttatgaatttgtttgcttttggcttaactttttaagaagtga 14705928  T
Q  401 ttatatataataatgatatagtcgtgtatatactagatttctcaacagcatttcagtgtttatctcatggcaaattttagtttaaagtttatgacactgt 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14705927 ttatatataataatgatatagtcgtgtatatactagatttctcaacagcatttcagtgtttatctcatggcaaattttagtttaaagtttataacactgt 14705828  T
Q  501 agtacaacgtaatgaggtggatggattgcagagatgcactggattctttag 551  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14705827 agtacaaagtaatgaggtggatggattgcagagatgcactggattctttag 14705777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 36796676 - 36796628
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  36796676 tctcacaagtgtttatgtcattagataagctcaaataagtcaatccaaa 36796628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 499688 - 499652
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||||||||||||||||||||||||||    
T  499688 ttatgtcagtaggtaagctcaaataagtcaatccaaa 499652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 10771857 - 10771806
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 126  Q
    ||||||||||| ||||| |||||| |||||||||||||| ||||||||||||    
T  10771857 tctcacaagtgcttatgccagtagataagctcaaataagccaatccaaatag 10771806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 11615619 - 11615572
Alignment:
Q  79 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 126  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  11615619 acaagtgtttatgttagtagataagctcaaataagccaatccaaatag 11615572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 19177546 - 19177597
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 126  Q
    ||||||||||||| ||| || ||||||| |||||||||||||||||||||||    
T  19177546 tctcacaagtgttcatgccaataggtaaactcaaataagtcaatccaaatag 19177597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 17369306 - 17369352
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||| |||||||||||| |||| |||||||||||||||||||    
T  17369306 tcacaagtgattatgtcagtagataagttcaaataagtcaatccaaa 17369352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 27153305 - 27153259
Alignment:
Q  79 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata 125  Q
    |||||||||| || ||||||||||||||||| |||||||||||||||    
T  27153305 acaagtgtttttgccagtaggtaagctcaaagaagtcaatccaaata 27153259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 13508541 - 13508589
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||||||||| |||||| |||| ||||||||||||| |||||    
T  13508541 tctcacaagtgtttatgccagtagataagttcaaataagtcaagccaaa 13508589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 31723906 - 31723958
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 127  Q
    ||||| |||||||||||  ||||  ||||||||||||||||||||||||||||    
T  31723906 tctcataagtgtttatgctagtacataagctcaaataagtcaatccaaatagg 31723958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 20982179 - 20982133
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||||| | |||||| |||||||||||||| |||||||||    
T  20982179 tcacaagtgtttacgacagtagataagctcaaataagccaatccaaa 20982133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 34198524 - 34198570
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||||| ||||  ||| ||||||||||||||||||||    
T  34198524 tcacaagtgtttatgttagtaaataaactcaaataagtcaatccaaa 34198570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 42034167 - 42034209
Alignment:
Q  81 aagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||| |||||||||||||||||||||||||||  ||||||||    
T  42034167 aagtgcttatgtcagtaggtaagctcaaataagctaatccaaa 42034209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 14331474 - 14331515
Alignment:
Q  82 agtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||| ||||| |||||| ||||||||||||||||||||||||    
T  14331474 agtgcttatgacagtagataagctcaaataagtcaatccaaa 14331515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 199
Target Start/End: Complemental strand, 14714810 - 14714683
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata-ggtctttagtttcacaa---tttgttttgggtgccattattttgtagt-a 171  Q
    ||||||||| |||||||||| | ||||||||||| || |||| |||| | |  ||||||||||||||   ||| |||| |||||||||||||| || | |    
T  14714810 tcacaagtgcttatgtcagtggataagctcaaatgagccaattcaaacatgccctttagtttcacaactttttttttttggtgccattattttttactaa 14714711  T
Q  172 attggtctccggaatgctttggctatga 199  Q
    ||| || ||||| || ||||||||||||    
T  14714710 atttgtttccggcatactttggctatga 14714683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 132
Target Start/End: Complemental strand, 40335842 - 40335785
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtcttt 132  Q
    |||||||||||||| ||  ||||| ||| |||||||||||||||||||| ||| ||||    
T  40335842 tctcacaagtgtttgtgcgagtagataaactcaaataagtcaatccaaacaggccttt 40335785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 41419431 - 41419468
Alignment:
Q  86 tttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  41419431 tttatgtcagtagattagctcaaataagtcaatccaaa 41419468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 41534550 - 41534587
Alignment:
Q  86 tttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  41534550 tttatgtcagtagattagctcaaataagtcaatccaaa 41534587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 4855796 - 4855840
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 119  Q
    ||||||||||||||| |||| ||  ||||||||||||||||||||    
T  4855796 tctcacaagtgtttaagtcattatataagctcaaataagtcaatc 4855840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 91 - 123
Target Start/End: Original strand, 14932413 - 14932445
Alignment:
Q  91 gtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||| ||||||||||||||||||||||||    
T  14932413 gtcagtagataagctcaaataagtcaatccaaa 14932445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 28578954 - 28578994
Alignment:
Q  83 gtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||| ||||||||| ||||||||||||||||||| ||||    
T  28578954 gtgtttttgtcagtagataagctcaaataagtcaattcaaa 28578994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 32194061 - 32194013
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||  |||| ||| ||| ||||||||||||||||||||||||    
T  32194061 tctcacaagttcttatatcattagttaagctcaaataagtcaatccaaa 32194013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 33961784 - 33961836
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 127  Q
    ||||| ||||| ||||||| |||| ||||||||||||| ||||| ||||||||    
T  33961784 tctcataagtgcttatgtccgtagataagctcaaataattcaattcaaatagg 33961836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 35135619 - 35135567
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtc 129  Q
    ||||||||| ||||||||||||  ||||| |||||||| |||||||| |||||    
T  35135619 tcacaagtggttatgtcagtagagaagctgaaataagttaatccaaacaggtc 35135567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 37968980 - 37969035
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtcttta 133  Q
    ||||||||  |||||||||||| |||||||||| ||||| ||||| |||||||||||    
T  37968980 tcacaagtacttatgtcagtagataagctcaaacaagtc-atccagataggtcttta 37969035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 39594920 - 39594956
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  39594920 ttatgtcggtagataagctcaaataagtcaatccaaa 39594956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 29793667 - 29793618
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaat 124  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  29793667 tctcacaagtgtttatgtcagtagataagctcaaataagtcaatacaaat 29793618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 5157175 - 5157224
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 126  Q
    ||||||||||||||||| |||| |||| ||||||||||||||||||||||    
T  5157175 tcacaagtgtttatgtccgtagataagttcaaataagtcaatccaaatag 5157224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 4757439 - 4757487
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||||||||| ||| |||||||||||||||||| |||||    
T  4757439 tctcacaagtgtttatgtcaatagataagctcaaataagtcaaaccaaa 4757487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 6292593 - 6292641
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  6292593 tctcaaaagtgcttatgtcagtagataagctcaaataagtcaatccaaa 6292641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 33723351 - 33723296
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtct 130  Q
    |||||||||||||||||  ||||| |||| ||||||||||||||||||| ||||||    
T  33723351 tctcacaagtgtttatggtagtagataagttcaaataagtcaatccaaacaggtct 33723296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 10199375 - 10199330
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaa 122  Q
    ||||||||| |||||| ||||| |||||||||||||||||||||||    
T  10199375 tcacaagtgcttatgttagtagataagctcaaataagtcaatccaa 10199330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 15515656 - 15515701
Alignment:
Q  74 ttctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 119  Q
    |||||||| ||||||||| |||||| ||||||||||||||||||||    
T  15515656 ttctcacacgtgtttatgccagtagataagctcaaataagtcaatc 15515701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 9602623 - 9602571
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 127  Q
    ||||||||||| ||| || ||||| |||||||| |||||||||||||||||||    
T  9602623 tctcacaagtgcttaagttagtagataagctcagataagtcaatccaaatagg 9602571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 125
Target Start/End: Complemental strand, 18403158 - 18403126
Alignment:
Q  93 cagtaggtaagctcaaataagtcaatccaaata 125  Q
    |||||||||||||||||||||||||||||||||    
T  18403158 cagtaggtaagctcaaataagtcaatccaaata 18403126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 24460370 - 24460322
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||| | |||||||||| |||| |||||||||||||||||||    
T  24460370 tctcacaagtgctcatgtcagtagataagttcaaataagtcaatccaaa 24460322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 48748564 - 48748516
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||||||||| | | ||||||||||||||||||| ||||    
T  48748564 tctcacaagtgtttatgtcaatggataagctcaaataagtcaattcaaa 48748516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 122
Target Start/End: Original strand, 2522701 - 2522744
Alignment:
Q  79 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaa 122  Q
    ||||||||||||| |||||| ||| |||||||||||||||||||    
T  2522701 acaagtgtttatgccagtagataaactcaaataagtcaatccaa 2522744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 25944542 - 25944585
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaat 118  Q
    |||||||||||||||||||||||  ||||| |||||||||||||    
T  25944542 tctcacaagtgtttatgtcagtaaataagcgcaaataagtcaat 25944585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 119
Target Start/End: Original strand, 32958739 - 32958782
Alignment:
Q  76 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 119  Q
    |||||||||| ||||| |||||| ||||||||||||||||||||    
T  32958739 ctcacaagtgcttatgacagtagataagctcaaataagtcaatc 32958782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 51929429 - 51929378
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggt 128  Q
    ||||| ||| |||||||||||| |||||||||| ||||||||||||| ||||    
T  51929429 tcacaggtgcttatgtcagtagataagctcaaaaaagtcaatccaaagaggt 51929378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 3597250 - 3597196
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtc 129  Q
    ||||||||||| |||| ||| ||| ||| |||||||||||||||||||| |||||    
T  3597250 tctcacaagtggttatatcattagataacctcaaataagtcaatccaaacaggtc 3597196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 113
Target Start/End: Original strand, 43420359 - 43420397
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataag 113  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  43420359 tctcacaagtgtttatgtctgtagataagctcaaataag 43420397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 6279503 - 6279547
Alignment:
Q  78 cacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaa 122  Q
    |||||||| |||||||||||| |||||| |||||||||| |||||    
T  6279503 cacaagtgcttatgtcagtagttaagctgaaataagtcactccaa 6279547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 6659781 - 6659829
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||| |||||  ||||| |||||| |||||||||||||||||    
T  6659781 tctcacaagtgcttatgctagtagataagctaaaataagtcaatccaaa 6659829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 7218043 - 7217995
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||| ||||||||||| | |||| |||||| |||||||||||||||||    
T  7218043 tctcagaagtgtttatgccggtagataagcttaaataagtcaatccaaa 7217995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 15558312 - 15558360
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||||||| | |||| | ||||||||||||| ||||||||||    
T  15558312 tctcacaagtgtttaagccagtcgataagctcaaataactcaatccaaa 15558360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 15784897 - 15784945
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||| ||||| |||||| |||||  ||||||||||||||||||||||||    
T  15784897 tctcgcaagtttttatgacagtaaataagctcaaataagtcaatccaaa 15784945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 18327109 - 18327065
Alignment:
Q  81 aagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata 125  Q
    ||||| ||||| |||||| |||||||||||||| |||||||||||    
T  18327109 aagtgcttatgacagtagataagctcaaataagccaatccaaata 18327065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 28837322 - 28837278
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 119  Q
    |||| |||||| |||||||||||| |||||||||||||| |||||    
T  28837322 tctctcaagtgcttatgtcagtagataagctcaaataagccaatc 28837278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 30257794 - 30257834
Alignment:
Q  84 tgtttatgtcagtaggtaagctcaaataagtcaatccaaat 124  Q
    ||||||||||||||| ||| ||||||||||| |||||||||    
T  30257794 tgtttatgtcagtagataaactcaaataagtaaatccaaat 30257834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 30259447 - 30259407
Alignment:
Q  83 gtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||| | |||||||| ||||||||||||||||||||    
T  30259447 gtgtttatgccggtaggtaaactcaaataagtcaatccaaa 30259407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 33976279 - 33976327
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||| | |||||| ||  ||||||||||||||||||||||||    
T  33976279 tctcacaagtgctgatgtcattaaataagctcaaataagtcaatccaaa 33976327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 34536259 - 34536307
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||||||||| ||| || | |||||||||||| ||||||    
T  34536259 tctcacaagtgtttatgtcaatagatacgttcaaataagtcattccaaa 34536307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 35017683 - 35017727
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 119  Q
    ||||||||||||||||| || ||| |||||||||||||| |||||    
T  35017683 tctcacaagtgtttatgccaatagataagctcaaataagccaatc 35017727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 41505787 - 41505823
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||| |||||||||||||| |||||||||    
T  41505787 ttatgtcagtagataagctcaaataagccaatccaaa 41505823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 44115874 - 44115826
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||  ||| || ||||||||| ||||||||||||||||||||    
T  44115874 tctcacaagtacttaagtgagtaggtaaactcaaataagtcaatccaaa 44115826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 48282235 - 48282279
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaataggtctt 131  Q
    ||||| |||||||||||||||||| |||||| ||||| |||||||    
T  48282235 ttatgccagtaggtaagctcaaattagtcaacccaaacaggtctt 48282279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 52013988 - 52014036
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||| ||||||||| || ||| ||||||||||||||| ||||||||    
T  52013988 tctcacacgtgtttatgccaatagataagctcaaataagttaatccaaa 52014036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 32730214 - 32730166
Alignment:
Q  78 cacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 126  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  32730214 cacaaatgtttatgtcagtaggtaagctcaaataagtcaatcgaaatag 32730166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 529464 - 529510
Alignment:
Q  76 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaa 122  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||    
T  529464 ctcacaagtgtttatgccagtagataagctcaaataagtcaatccaa 529510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 47046071 - 47046029
Alignment:
Q  81 aagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  47046071 aagtgtttatgtcagtagataagcacaaataagtcaatccaaa 47046029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 30812250 - 30812287
Alignment:
Q  86 tttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  30812250 tttatgtcagtaggtaaactcaaataagtcaatccaaa 30812287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 3836650 - 3836598
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtc 129  Q
    ||||||||| ||| | |||||| |||||||||||||| |||||||||||||||    
T  3836650 tcacaagtgcttaagccagtagataagctcaaataaggcaatccaaataggtc 3836598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 8427114 - 8427166
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 127  Q
    ||||||||||  |||||| ||||| ||||||||||||| ||||||||||||||    
T  8427114 tctcacaagtacttatgttagtagataagctcaaataaatcaatccaaatagg 8427166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 47042008 - 47041960
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||||| |||||| ||| || |||||||||||||||||||||    
T  47042008 tctcacaagtgttaatgtcaatagatatgctcaaataagtcaatccaaa 47041960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 1418521 - 1418568
Alignment:
Q  76 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||| ||||| ||||| |||||| ||||||||||||||||||||||||    
T  1418521 ctcataagtgcttatgccagtagataagctcaaataagtcaatccaaa 1418568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 126
Target Start/End: Original strand, 9210934 - 9210973
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaatag 126  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  9210934 ttatatcagtagataagctcaaataagtcaatccaaatag 9210973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 5276594 - 5276639
Alignment:
Q  78 cacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||||||| ||||| ||||||||  ||||||||||||||    
T  5276594 cacaagtgtttatgttagtagataagctcatctaagtcaatccaaa 5276639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 7513663 - 7513708
Alignment:
Q  78 cacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||| ||||| |||||| ||||||||||||||||||| ||||    
T  7513663 cacaagtgcttatgccagtagataagctcaaataagtcaattcaaa 7513708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 128
Target Start/End: Complemental strand, 19302520 - 19302479
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaataggt 128  Q
    |||||||||||| ||||||||||||||||||| |||| ||||    
T  19302520 ttatgtcagtagataagctcaaataagtcaattcaaacaggt 19302479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 46946017 - 46946054
Alignment:
Q  84 tgtttatgtcagtaggtaagctcaaataagtcaatcca 121  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  46946017 tgtttatgccagtagctaagctcaaataagtcaatcca 46946054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 11619115 - 11619079
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||| |||||||||||||| |||||||||    
T  11619115 ttatgtcagtagataagctcaaataagccaatccaaa 11619079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 12234858 - 12234806
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 127  Q
    ||||||| ||| | ||| |||||| ||||||||| ||||||||||||||||||    
T  12234858 tctcacacgtgctaatgccagtagataagctcaactaagtcaatccaaatagg 12234806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 23214956 - 23215004
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||| |||||||||||  ||||| |||| |||||||||||||||||||    
T  23214956 tctcataagtgtttatgctagtagataaggtcaaataagtcaatccaaa 23215004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 29363609 - 29363657
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||| |||||| ||||| |||| ||||||||| |||||||||    
T  29363609 tctcacaagtgcttatgttagtagataagttcaaataagccaatccaaa 29363657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 31341242 - 31341294
Alignment:
Q  81 aagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtcttta 133  Q
    |||||||||||  |||||  ||||||||||||||||||||||| | |||||||    
T  31341242 aagtgtttatgcaagtagaaaagctcaaataagtcaatccaaacatgtcttta 31341294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 33266443 - 33266407
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  33266443 ttatgtcggtagataagctcaaataagtcaatccaaa 33266407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 33673190 - 33673226
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  33673190 ttatgtcagtagataagctcaaatgagtcaatccaaa 33673226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 33871347 - 33871391
Alignment:
Q  80 caagtgtttatgtcagtaggtaagctcaaataagtcaatccaaat 124  Q
    ||||||||||||| ||||| |||||||||| ||||||||| ||||    
T  33871347 caagtgtttatgtaagtagataagctcaaaaaagtcaatcaaaat 33871391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 40598454 - 40598406
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||| |||||||| |||  ||||| ||||||||||||||||||||||||    
T  40598454 tctcgcaagtgttcatgctagtagataagctcaaataagtcaatccaaa 40598406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 44290012 - 44289960
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 127  Q
    |||||| ||||| |||| || ||| ||||||||||||||||||| ||||||||    
T  44290012 tctcaccagtgtctatgccactagataagctcaaataagtcaatgcaaatagg 44289960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 122
Target Start/End: Original strand, 1017129 - 1017176
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaa 122  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||    
T  1017129 tctcacaagtgtttatgtcagtagattagctcaaataagtcaatccaa 1017176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 24193618 - 24193681
Alignment:
Q  60 ccaaatagtttcacttctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||| ||||  |||||||||||||||| ||| || ||||||||||||||||||||||||    
T  24193618 ccaaatagtctcacaactcacaagtgtttatgccaggagataagctcaaataagtcaatccaaa 24193681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 126
Target Start/End: Complemental strand, 32421027 - 32420976
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 126  Q
    ||||||||||| |||||  |||||||||||||||||||||||||||||||||    
T  32421027 tctcacaagtgcttatgctagtaggtaagctcaaataagtcaatccaaatag 32420976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 18628522 - 18628472
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata 125  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| |||||    
T  18628522 tctcacaagtgtttatgtcagtagataagctcaaatacgtcaatctaaata 18628472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 18512484 - 18512440
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 119  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||    
T  18512484 tctcacaagtgtttatgtcagtagataagctcaaataagttaatc 18512440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 27043787 - 27043751
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||| ||||||||||||||||||||||||    
T  27043787 ttatgtcagtagataagctcaaataagtcaatccaaa 27043751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 56186867 - 56186803
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtctttagtttca 139  Q
    |||||||||||||||||| ||||| ||| ||| ||||||| |||||||| | || ||||||||||    
T  56186867 tctcacaagtgtttatgttagtagataaactcgaataagttaatccaaacaagtgtttagtttca 56186803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 22845674 - 22845620
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtct 130  Q
    ||||||||||  |||||| ||||| |||||||||||||| ||||||||||||||||    
T  22845674 tctcacaagtacttatgt-agtagataagctcaaataagccaatccaaataggtct 22845620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 1075561 - 1075607
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||||||| |||||| |||||||||||||| |||| ||||    
T  1075561 tcacaagtgtttatgccagtagataagctcaaataagccaattcaaa 1075607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 19305027 - 19305077
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata 125  Q
    |||||||| || |||||||| ||| ||| ||||||||||||||||||||||    
T  19305027 tctcacaaatgcttatgtcaatagataatctcaaataagtcaatccaaata 19305077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 28259376 - 28259422
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||| |||||||||| | ||||||||||||||||| ||||||    
T  28259376 tcacaagtgcttatgtcagttgataagctcaaataagtcagtccaaa 28259422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 7368023 - 7367975
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||| ||||||| | |||| ||| ||||||||||||||||||||    
T  7368023 tctcacaagcgtttatgcctgtagataaactcaaataagtcaatccaaa 7367975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 126
Target Start/End: Original strand, 8420908 - 8420948
Alignment:
Q  87 ttatgtcagtaggtaagctcaaa-taagtcaatccaaatag 126  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  8420908 ttatgtcagtagataagctcaaactaagtcaatccaaatag 8420948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 10365883 - 10365923
Alignment:
Q  82 agtgtttatgtcagtaggtaagctcaaataagtcaatccaa 122  Q
    ||||||||||||||||| |||| | ||||||||||||||||    
T  10365883 agtgtttatgtcagtagataagattaaataagtcaatccaa 10365923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 15173260 - 15173224
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||| |||| |||||||||||||||||||    
T  15173260 ttatgtcagtagataagttcaaataagtcaatccaaa 15173224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 17822822 - 17822786
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  17822822 ttatgtcagtagataagctcaaataagttaatccaaa 17822786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 17975302 - 17975258
Alignment:
Q  79 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||| |||  |||| ||||||||||||||||||||||||    
T  17975302 acaagtgtttgtgttggtagataagctcaaataagtcaatccaaa 17975258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 19429439 - 19429391
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||||||||  |||||  |||||||||||||| |||||||||    
T  19429439 tctcacaagtgtttataccagtaaataagctcaaataagccaatccaaa 19429391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 28615435 - 28615483
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||||||  ||||| ||| || |||||||||||||||||    
T  28615435 tctcacaagtgtttatgctagtagataaacttaaataagtcaatccaaa 28615483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 32071964 - 32072012
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||| |||||||| ||| ||| ||||||||||||| ||||||    
T  32071964 tctcacaagtgcttatgtcaatagataaactcaaataagtcagtccaaa 32072012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 42403980 - 42403944
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||| | ||||||||||||||||||||||||    
T  42403980 ttatgtcagttgataagctcaaataagtcaatccaaa 42403944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 44320050 - 44320098
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||| |||||||| || |||||||||||||||||  |||||||||    
T  44320050 tctcacaattgtttatgccaataggtaagctcaaataaaccaatccaaa 44320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 47146045 - 47146097
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 127  Q
    ||||||||||| ||||| || ||  |||| |||||||||||||||||||||||    
T  47146045 tctcacaagtgcttatgccaatatataagttcaaataagtcaatccaaatagg 47146097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 49940124 - 49940088
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||| || |||||||||||||||||||||||||||    
T  49940124 ttatgttagcaggtaagctcaaataagtcaatccaaa 49940088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 54277292 - 54277248
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 119  Q
    ||||| |||||||||||||| ||| |||| |||||||||||||||    
T  54277292 tctcataagtgtttatgtcactagataagttcaaataagtcaatc 54277248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 55870311 - 55870263
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||| ||||||||||| ||| ||| ||||||||||| ||||||||    
T  55870311 tctcacaaatgtttatgtcattagataaactcaaataagttaatccaaa 55870263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 22667504 - 22667556
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 127  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||| |||||||    
T  22667504 tctcacaagtgcttatgtcagtagataagctcaaataagccaatcgaaatagg 22667556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 22724143 - 22724195
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 127  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||| |||||||    
T  22724143 tctcacaagtgcttatgtcagtagataagctcaaataagccaatcgaaatagg 22724195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 20210897 - 20210849
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||| |||||||||||| ||| ||||||||| ||||||||||    
T  20210897 tctcacaagtggttatgtcagtagataacctcaaataaatcaatccaaa 20210849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 21872264 - 21872216
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||| |||||||||||| |||| |||||||||| ||||||||    
T  21872264 tctcacaagtgcttatgtcagtagataagatcaaataagttaatccaaa 21872216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 123
Target Start/End: Complemental strand, 26990181 - 26990146
Alignment:
Q  88 tatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||| ||||||||||||||||||||||||    
T  26990181 tatgtcagtagataagctcaaataagtcaatccaaa 26990146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 41848681 - 41848634
Alignment:
Q  79 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 126  Q
    |||||||||||||| ||||| ||| |||||||||||||||| ||||||    
T  41848681 acaagtgtttatgttagtagataaactcaaataagtcaatctaaatag 41848634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 51929843 - 51929890
Alignment:
Q  76 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||||||||  | ||| ||||||||||||||||||||||||    
T  51929843 ctcacaagtgtttatgctaatagataagctcaaataagtcaatccaaa 51929890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 16072998 - 16072956
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaataggtc 129  Q
    |||||||| ||| |||||||||||||||||||||||| |||||    
T  16072998 ttatgtcattagataagctcaaataagtcaatccaaacaggtc 16072956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 31512486 - 31512532
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||| |||  |||||||||||||||| |||||||||||||    
T  31512486 tcacaagtgttcatgctagtaggtaagctcaaacaagtcaatccaaa 31512532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 26911704 - 26911741
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaat 124  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  26911704 ttatgtcagtagataaactcaaataagtcaatccaaat 26911741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 33965457 - 33965412
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatcc 120  Q
    ||||||| ||||||| |||||||| |||||||||||| ||||||||    
T  33965457 tctcacatgtgtttaagtcagtagataagctcaaatatgtcaatcc 33965412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 20173859 - 20173811
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||| |||| ||| ||| || |||||||||||||||||||||    
T  20173859 tctcacaagtgcttatttcaatagatacgctcaaataagtcaatccaaa 20173811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 24158483 - 24158435
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata 125  Q
    ||||||||  |||||||||||| |||||| ||||||| |||||||||||    
T  24158483 tcacaagtacttatgtcagtagataagcttaaataagccaatccaaata 24158435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 25447202 - 25447166
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  25447202 ttatgtcagtagataaactcaaataagtcaatccaaa 25447166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 32663739 - 32663787
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||| | |||| |||| |||||||||||||| |||||||||    
T  32663739 tctcacaagtgtatttgtcggtagataagctcaaataagccaatccaaa 32663787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 37138383 - 37138431
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||||||||||||| |||  || |||||| |||||||||    
T  37138383 tctcacaagtgtttatgtcagtagataaattctaataagccaatccaaa 37138431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 44014767 - 44014719
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||||||  ||||| ||| |||||||||| |||||||||    
T  44014767 tctcacaagtgtttatgctagtagataaactcaaataagccaatccaaa 44014719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 13866979 - 13867027
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  13866979 tctcacaagtgtttatggcagtagataagctcaaataggtcaatccaaa 13867027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 22878199 - 22878247
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  22878199 tctcacaagtgcttatgtcagtggataagctcaaataagtcaatccaaa 22878247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 43985314 - 43985363
Alignment:
Q  79 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggt 128  Q
    |||||||||||||||||||| ||| || ||||||||| ||||||||||||    
T  43985314 acaagtgtttatgtcagtagataaacttaaataagtcgatccaaataggt 43985363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 3458700 - 3458740
Alignment:
Q  79 acaagtgtttatgtcagtaggtaagctcaaataagtcaatc 119  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  3458700 acaagtgtttatgccagtaagtaagctcaaataagtcaatc 3458740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 15370292 - 15370244
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||| || ||||| |||||| ||||||||||||||||||||||||    
T  15370292 tctcacaaatgcttatgccagtagataagctcaaataagtcaatccaaa 15370244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 28803499 - 28803447
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 127  Q
    ||||||| ||| ||||| | |||| ||||||||||||||||||||||||||||    
T  28803499 tctcacatgtgcttatgccggtagataagctcaaataagtcaatccaaatagg 28803447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 40759261 - 40759309
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||| |||||||| ||| |||||||||||||| |||||||||    
T  40759261 tctcacaagtgcttatgtcaatagataagctcaaataaggcaatccaaa 40759309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 40837398 - 40837358
Alignment:
Q  83 gtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  40837398 gtgtttatgtcagtagataagctcaaataagccaatccaaa 40837358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 41170711 - 41170759
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||||||| ||||| ||| |||||||||| |||||||||    
T  41170711 tctcacaagtgtttatgttagtagataaactcaaataagccaatccaaa 41170759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 18525209 - 18525162
Alignment:
Q  76 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||| |||||||||||| |||| ||||||||||||||||||| ||||    
T  18525209 ctcacgagtgtttatgtctgtagataagctcaaataagtcaattcaaa 18525162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 123
Target Start/End: Complemental strand, 28810420 - 28810373
Alignment:
Q  76 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||||| || |||  |||||||||||||||||||||||    
T  28810420 ctcacaagtgtttatgccaatagagaagctcaaataagtcaatccaaa 28810373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 40158819 - 40158870
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatag 126  Q
    ||||||||||  |||||||||||| || ||||||||||| ||||||||||||    
T  40158819 tctcacaagttcttatgtcagtagatatgctcaaataagccaatccaaatag 40158870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 112
Target Start/End: Original strand, 29430862 - 29430896
Alignment:
Q  78 cacaagtgtttatgtcagtaggtaagctcaaataa 112  Q
    ||||||||||||||||||||| |||||||||||||    
T  29430862 cacaagtgtttatgtcagtagataagctcaaataa 29430896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 1830143 - 1830188
Alignment:
Q  78 cacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||| |||||||||||  ||| ||||||||||||||||||||    
T  1830143 cacaagtgcttatgtcagtaaataaactcaaataagtcaatccaaa 1830188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 8017538 - 8017583
Alignment:
Q  78 cacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||| |||||||| ||| ||| ||||||||||||||||||||    
T  8017538 cacaagtgcttatgtcaatagataacctcaaataagtcaatccaaa 8017583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 21616629 - 21616580
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaat 124  Q
    |||||||| ||||||||||||| | ||| || ||||||||||||||||||    
T  21616629 tctcacaaatgtttatgtcagtggataaactgaaataagtcaatccaaat 21616580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 26372697 - 26372648
Alignment:
Q  74 ttctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||| || ||||||||| || ||||||||||| ||||||||||||    
T  26372697 ttctcacaaatgcttatgtcagaagataagctcaaatgagtcaatccaaa 26372648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 119
Target Start/End: Complemental strand, 41516982 - 41516949
Alignment:
Q  86 tttatgtcagtaggtaagctcaaataagtcaatc 119  Q
    ||||||| ||||||||||||||||||||||||||    
T  41516982 tttatgtgagtaggtaagctcaaataagtcaatc 41516949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 3078573 - 3078529
Alignment:
Q  79 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||| |||  |||| ||||||||||||||||||||||||    
T  3078573 acaagtgtttgtgttggtagataagctcaaataagtcaatccaaa 3078529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 18179062 - 18179098
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  18179062 ttatgttagtagataagctcaaataagtcaatccaaa 18179098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 27317492 - 27317528
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  27317492 ttatgtcggtagataagctcaaataagtcaatccaaa 27317528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 30331864 - 30331900
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||| |||||| |||||||||||||||||    
T  30331864 ttatgtcagtagataagctgaaataagtcaatccaaa 30331900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 35329787 - 35329739
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||| ||||||||||  ||||| |||||||| |||||||||||||||    
T  35329787 tctcactagtgtttatggtagtagataagctcacataagtcaatccaaa 35329739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 40059418 - 40059382
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  40059418 ttatgtcagtagataaactcaaataagtcaatccaaa 40059382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 40085318 - 40085282
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  40085318 ttatgtcagtagataaactcaaataagtcaatccaaa 40085282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 40851699 - 40851747
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||| |||||||||||| |  ||||| ||||||||||||||||||    
T  40851699 tctcacaattgtttatgtcagcaattaagcgcaaataagtcaatccaaa 40851747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000005; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 123
Target Start/End: Original strand, 4560604 - 4560651
Alignment:
Q  76 ctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||| |||||||| ||| ||||||||||||||||||||||||    
T  4560604 ctcacaagtgcttatgtcaatagataagctcaaataagtcaatccaaa 4560651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 121
Target Start/End: Original strand, 10560147 - 10560194
Alignment:
Q  74 ttctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatcca 121  Q
    ||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  10560147 ttctcacaaatgtttatgtcagtagataagctcaactaagtcaatcca 10560194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 79 - 144
Target Start/End: Original strand, 34290974 - 34291039
Alignment:
Q  79 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtctttagtttcacaatt 144  Q
    |||||||||||||||||||| | | |||||| ||||||||| ||||||| || |||||||| ||||    
T  34290974 acaagtgtttatgtcagtagatgaactcaaacaagtcaatcgaaataggcctctagtttcaaaatt 34291039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 1821934 - 1821982
Alignment:
Q  79 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 127  Q
    ||||||||||||||| |||  ||||||||||||||||||| ||||||||    
T  1821934 acaagtgtttatgtcggtatctaagctcaaataagtcaattcaaatagg 1821982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 1856379 - 1856427
Alignment:
Q  79 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 127  Q
    ||||||||||||||| |||  ||||||||||||||||||| ||||||||    
T  1856379 acaagtgtttatgtcggtatctaagctcaaataagtcaattcaaatagg 1856427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 7714343 - 7714391
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||||||||| || ||  ||||||||||||||||||||||||    
T  7714343 tctcacaagtgtttatgacattatataagctcaaataagtcaatccaaa 7714391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 9700102 - 9700150
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||||||  ||||| ||||||||||||||| ||||||||    
T  9700102 tctcacaagtgtttatgctagtagataagctcaaataagttaatccaaa 9700150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 18331815 - 18331863
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||| |||||| ||||| |||| |||||||||||||||||||    
T  18331815 tctcacaagtgcttatgttagtagataagatcaaataagtcaatccaaa 18331863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 22705079 - 22705031
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaata 125  Q
    |||||||||||||||| | |||||||||||||||||| |||| ||||||    
T  22705079 tcacaagtgtttatgttaataggtaagctcaaataagccaattcaaata 22705031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 38602440 - 38602476
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||| ||||||||||||||||||||||||    
T  38602440 ttatgtcagtagataagctcaaataagtcaatccaaa 38602476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 2606152 - 2606198
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||| |||| |||||||||||| ||||||| ||||||||||||||||    
T  2606152 tcactagtgattatgtcagtagataagctcgaataagtcaatccaaa 2606198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 8060775 - 8060817
Alignment:
Q  81 aagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||| ||| || |||||||||||||||||||||    
T  8060775 aagtgtttatgtcaatagatatgctcaaataagtcaatccaaa 8060817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 43368669 - 43368615
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtc 129  Q
    |||||||| || |||||| ||||| |||| ||||||||||||||||||| |||||    
T  43368669 tctcacaaatgcttatgttagtagataagatcaaataagtcaatccaaacaggtc 43368615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 1561378 - 1561427
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaat 124  Q
    ||||||||||||||||| || ||| |||| |||||||| |||||||||||    
T  1561378 tctcacaagtgtttatgccattagataagatcaaataaatcaatccaaat 1561427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 6950423 - 6950468
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatcc 120  Q
    |||||||| |||||||| |||||| ||| |||||||||||||||||    
T  6950423 tctcacaaatgtttatgccagtagataaactcaaataagtcaatcc 6950468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 1892193 - 1892149
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 119  Q
    ||||||||||||||||| | |||| ||| ||||||||||||||||    
T  1892193 tctcacaagtgtttatgacggtagataaactcaaataagtcaatc 1892149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 2487977 - 2487929
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||| |||||||||||| | | |||||||||| |||||||||    
T  2487977 tctcacaagtgcttatgtcagtagatgaactcaaataagccaatccaaa 2487929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 7008699 - 7008747
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||| ||||| |||||| ||| ||||||||||||||| ||||    
T  7008699 tctcacaagtgcttatgccagtagataaactcaaataagtcaattcaaa 7008747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 10488564 - 10488612
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||| |||||||||| ||| | |||||||||||||| |||||||||    
T  10488564 tctcacatgtgtttatgttagttgataagctcaaataagccaatccaaa 10488612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 14926951 - 14926903
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||| ||||| |||||  |||| |||||||||||||||||||    
T  14926951 tctcacaagtgcttatgccagtaaataagttcaaataagtcaatccaaa 14926903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 16162861 - 16162909
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||||||  ||||| ||| |||||||||| |||||||||    
T  16162861 tctcacaagtgtttatgctagtagataaactcaaataagccaatccaaa 16162909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 20186433 - 20186381
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 127  Q
    |||||| ||||| |||| || ||| ||||||||||||||||||| ||||||||    
T  20186433 tctcaccagtgtctatgccactagataagctcaaataagtcaatgcaaatagg 20186381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 20205500 - 20205448
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 127  Q
    |||||| ||||| |||| || ||| ||||||||||||||||||| ||||||||    
T  20205500 tctcaccagtgtctatgccactagataagctcaaataagtcaatgcaaatagg 20205448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 29168824 - 29168776
Alignment:
Q  81 aagtgtttatgtcagtaggtaagctcaaataagtcaatccaaataggtc 129  Q
    ||||| |||||  ||||||||||||||||| ||||||| ||||||||||    
T  29168824 aagtgcttatgctagtaggtaagctcaaatcagtcaatacaaataggtc 29168776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 30251411 - 30251375
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||| |||||||||||||| |||||||||    
T  30251411 ttatgtcagtagataagctcaaataagccaatccaaa 30251375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 32976478 - 32976522
Alignment:
Q  79 acaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||| |||||||||||| ||||||||||||||  ||||||||    
T  32976478 acaagtgcttatgtcagtagataagctcaaataagggaatccaaa 32976522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 39881690 - 39881646
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatc 119  Q
    ||||||||||||||||| || ||| |||| |||||||||||||||    
T  39881690 tctcacaagtgtttatgccaatagataagttcaaataagtcaatc 39881646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 43393741 - 43393689
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 127  Q
    ||||| |||||||| ||  ||||| |||||| |||||||||||||||||||||    
T  43393741 tctcaaaagtgtttttgcaagtagataagcttaaataagtcaatccaaatagg 43393689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 43717891 - 43717851
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaatagg 127  Q
    |||||||| ||| |||||||||||||| |||||||||||||    
T  43717891 ttatgtcaatagataagctcaaataagccaatccaaatagg 43717851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 123
Target Start/End: Original strand, 13908343 - 13908389
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||||||||||| |||| |||||||||||||| ||||    
T  13908343 tcacaagtgtttatgtcagtagataagttcaaataagtcaattcaaa 13908389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 31776239 - 31776193
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  31776239 tcacaagtgtatatatcagtagataagctcaaataagtcaatccaaa 31776193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 8420166 - 8420117
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaat-aagtcaatccaaa 123  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  8420166 tctcacaagtgtttatgtcaatagataagctcaaataaagtcaatccaaa 8420117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 12111068 - 12111120
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaatagg 127  Q
    |||| |||||| |||||  ||||| ||||||||||||||||||||||||||||    
T  12111068 tctcgcaagtgcttatgctagtagataagctcaaataagtcaatccaaatagg 12111120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 6742912 - 6742955
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaat 118  Q
    ||||||||||| |||||  |||||||||||||||||||||||||    
T  6742912 tctcacaagtgattatgctagtaggtaagctcaaataagtcaat 6742955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 118
Target Start/End: Complemental strand, 7351640 - 7351597
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaat 118  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||    
T  7351640 tctcacaagtgcttatgtcagtagataaactcaaataagtcaat 7351597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 2732216 - 2732160
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctc--aaataagtcaatccaaataggtc 129  Q
    ||||||||||| ||||||||||||  ||||||  |||||||||||||| ||||||||    
T  2732216 tctcacaagtgcttatgtcagtagacaagctctcaaataagtcaatcccaataggtc 2732160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 17241127 - 17241082
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaa 122  Q
    |||||||||||||||||||||  ||| ||||||||||| |||||||    
T  17241127 tcacaagtgtttatgtcagtatataaactcaaataagtaaatccaa 17241082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 26559208 - 26559159
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaat 124  Q
    |||||||| || ||||| |||||||||| ||||||||||| |||||||||    
T  26559208 tctcacaaatgcttatgccagtaggtaaactcaaataagttaatccaaat 26559159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 738510 - 738462
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||| ||||||| ||| ||| ||||||||||||||| ||||||||    
T  738510 tctcacaaatgtttatctcaatagataagctcaaataagttaatccaaa 738462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 113
Target Start/End: Original strand, 3750100 - 3750136
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataag 113  Q
    |||||||||||||||||||||| |||||||| |||||    
T  3750100 tcacaagtgtttatgtcagtagataagctcagataag 3750136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 4325274 - 4325226
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||||||| ||||| ||| || |||| ||||||||||||    
T  4325274 tctcacaagtgtttatgttagtagataaactaaaattagtcaatccaaa 4325226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 8010458 - 8010506
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||| |||||||| || ||| |||||||| |||||||||||||||    
T  8010458 tctcacaaatgtttatgccaatagataagctcacataagtcaatccaaa 8010506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 10016724 - 10016772
Alignment:
Q  75 tctcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||||||||||||||| | |||| |||||||||||||  |||||||||    
T  10016724 tctcacaagtgtttatgcctgtagataagctcaaataaaccaatccaaa 10016772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 20861655 - 20861619
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  20861655 ttatgccagtaggtaagctcaaataagacaatccaaa 20861619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 21405111 - 21405075
Alignment:
Q  87 ttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||  ||||||||||||||||||||||||    
T  21405111 ttatgtcagtatataagctcaaataagtcaatccaaa 21405075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 159940 - 159894
Alignment:
Q  77 tcacaagtgtttatgtcagtaggtaagctcaaataagtcaatccaaa 123  Q
    |||||||||||||| | ||||| |||||||||||||| |||||||||    
T  159940 tcacaagtgtttatattagtagataagctcaaataagccaatccaaa 159894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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