View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17828_low_60 (Length: 202)
Name: NF17828_low_60
Description: NF17828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17828_low_60 |
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Alignment Details
Target: chr7 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 20228017 - 20227913
Alignment:
| Q |
15 |
acctgtgtcttacacgtgatctctcttactagttactccagttctcctcctcctcaaacctcaagcctcgataccaccgaacacaacaaaatcttctaat |
114 |
Q |
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| T |
20228017 |
acctgtgtcttacacgtgatctctcttgctagttactccagttctcctcctcctcaaacctcaagcctcgataccaccgaacacaacaaaatcttctaat |
20227918 |
T |
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| Q |
115 |
ggctt |
119 |
Q |
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||||| |
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| T |
20227917 |
ggctt |
20227913 |
T |
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