View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17829_low_8 (Length: 435)

Name: NF17829_low_8
Description: NF17829
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17829_low_8
NF17829_low_8
[»] chr7 (40 HSPs)
chr7 (11-242)||(21669979-21670210)
chr7 (11-244)||(16376543-16376776)
chr7 (11-248)||(21656626-21656863)
chr7 (11-240)||(43933546-43933775)
chr7 (11-244)||(40968889-40969122)
chr7 (11-242)||(13786168-13786399)
chr7 (11-243)||(15109664-15109896)
chr7 (11-243)||(21804571-21804803)
chr7 (11-243)||(27903416-27903648)
chr7 (11-243)||(42242153-42242385)
chr7 (11-242)||(38163339-38163570)
chr7 (16-244)||(3840639-3840867)
chr7 (11-243)||(33916946-33917178)
chr7 (11-226)||(24924077-24924292)
chr7 (11-242)||(21341821-21342052)
chr7 (11-242)||(27138528-27138759)
chr7 (11-246)||(31373454-31373689)
chr7 (11-242)||(17178237-17178469)
chr7 (11-210)||(21753524-21753723)
chr7 (48-218)||(39030276-39030446)
chr7 (11-61)||(31096698-31096748)
chr7 (16-59)||(3840912-3840955)
chr7 (16-59)||(16376812-16376855)
chr7 (16-59)||(17178508-17178551)
chr7 (16-59)||(21341737-21341780)
chr7 (16-59)||(21656547-21656590)
chr7 (16-59)||(21669895-21669938)
chr7 (16-59)||(21804842-21804885)
chr7 (16-59)||(27138798-27138841)
chr7 (16-59)||(31373370-31373413)
chr7 (16-59)||(33917217-33917260)
chr7 (16-59)||(42242424-42242467)
chr7 (16-57)||(43933815-43933856)
chr7 (19-59)||(24924001-24924041)
chr7 (16-59)||(15109930-15109973)
chr7 (16-59)||(21753760-21753803)
chr7 (16-59)||(27903686-27903729)
chr7 (16-59)||(31096615-31096658)
chr7 (177-223)||(21681073-21681119)
chr7 (182-226)||(21713643-21713687)
[»] chr3 (45 HSPs)
chr3 (11-240)||(39146438-39146667)
chr3 (11-242)||(26948796-26949027)
chr3 (11-243)||(20671247-20671479)
chr3 (11-243)||(36076453-36076685)
chr3 (11-242)||(4584434-4584665)
chr3 (11-249)||(43363604-43363842)
chr3 (11-240)||(31488409-31488638)
chr3 (11-243)||(12264198-12264430)
chr3 (11-243)||(38653926-38654158)
chr3 (11-242)||(49672560-49672791)
chr3 (11-243)||(45557883-45558115)
chr3 (11-242)||(1941720-1941951)
chr3 (11-242)||(21098302-21098533)
chr3 (11-242)||(34121353-34121584)
chr3 (11-242)||(49478206-49478437)
chr3 (11-243)||(49506348-49506580)
chr3 (11-242)||(3898420-3898651)
chr3 (11-237)||(55041588-55041820)
chr3 (11-242)||(54073025-54073259)
chr3 (11-200)||(24119205-24119394)
chr3 (58-242)||(40014653-40014837)
chr3 (76-210)||(26051334-26051469)
chr3 (140-243)||(6460167-6460269)
chr3 (11-84)||(26052236-26052309)
chr3 (16-59)||(1941990-1942033)
chr3 (16-59)||(3898338-3898381)
chr3 (16-59)||(12264115-12264158)
chr3 (16-59)||(20671166-20671209)
chr3 (16-59)||(21098219-21098262)
chr3 (16-59)||(26052349-26052392)
chr3 (16-59)||(26948689-26948732)
chr3 (16-59)||(31488329-31488372)
chr3 (16-59)||(34121271-34121314)
chr3 (16-59)||(38654198-38654241)
chr3 (16-59)||(43363881-43363924)
chr3 (16-59)||(49478124-49478167)
chr3 (16-59)||(49672478-49672521)
chr3 (16-59)||(55041858-55041901)
chr3 (16-57)||(36076723-36076764)
chr3 (16-59)||(24119126-24119169)
chr3 (16-59)||(39146363-39146406)
chr3 (16-59)||(45558153-45558196)
chr3 (188-242)||(13364022-13364076)
chr3 (177-233)||(37099708-37099764)
chr3 (81-117)||(41798957-41798993)
[»] chr6 (35 HSPs)
chr6 (16-242)||(15044725-15044951)
chr6 (17-242)||(13533771-13533996)
chr6 (11-245)||(17202430-17202664)
chr6 (11-242)||(2005426-2005657)
chr6 (11-244)||(3592891-3593124)
chr6 (11-244)||(12597263-12597496)
chr6 (11-242)||(10584728-10584959)
chr6 (11-240)||(19997663-19997892)
chr6 (11-242)||(33645940-33646171)
chr6 (11-242)||(28099597-28099828)
chr6 (11-245)||(2266766-2267008)
chr6 (11-138)||(8539598-8539725)
chr6 (11-175)||(17594814-17594979)
chr6 (117-243)||(1405562-1405688)
chr6 (11-138)||(25448747-25448874)
chr6 (103-206)||(33035523-33035626)
chr6 (187-249)||(8539727-8539789)
chr6 (16-59)||(2266684-2266727)
chr6 (16-59)||(10584996-10585039)
chr6 (16-59)||(12597535-12597578)
chr6 (16-59)||(15044639-15044682)
chr6 (16-59)||(17202348-17202391)
chr6 (16-59)||(17594733-17594776)
chr6 (16-59)||(19997580-19997623)
chr6 (16-59)||(28099868-28099911)
chr6 (16-59)||(33645858-33645901)
chr6 (201-243)||(162668-162710)
chr6 (16-59)||(2005348-2005391)
chr6 (16-59)||(3589064-3589107)
chr6 (16-59)||(3592087-3592130)
chr6 (16-59)||(3592812-3592855)
chr6 (16-59)||(25448665-25448708)
chr6 (198-242)||(6300709-6300753)
chr6 (198-242)||(6307519-6307563)
chr6 (23-59)||(8539523-8539559)
[»] chr4 (44 HSPs)
chr4 (17-243)||(16904951-16905177)
chr4 (11-242)||(33139471-33139702)
chr4 (11-240)||(45976992-45977221)
chr4 (11-240)||(46256032-46256261)
chr4 (17-243)||(35760585-35760811)
chr4 (11-243)||(16917887-16918119)
chr4 (11-242)||(37590804-37591035)
chr4 (11-233)||(44376088-44376310)
chr4 (11-243)||(52434622-52434854)
chr4 (11-242)||(48118534-48118762)
chr4 (11-242)||(30824922-30825153)
chr4 (11-246)||(31965965-31966200)
chr4 (11-243)||(41387124-41387356)
chr4 (11-244)||(53143260-53143493)
chr4 (242-417)||(21620337-21620515)
chr4 (11-242)||(37651664-37651895)
chr4 (11-244)||(39058355-39058588)
chr4 (11-242)||(12090459-12090691)
chr4 (11-219)||(31628510-31628718)
chr4 (11-243)||(47142799-47143031)
chr4 (11-218)||(52098214-52098422)
chr4 (11-191)||(45782480-45782660)
chr4 (11-240)||(54624955-54625177)
chr4 (16-179)||(50229769-50229933)
chr4 (148-202)||(50229712-50229766)
chr4 (201-245)||(18209699-18209743)
chr4 (16-59)||(12090730-12090773)
chr4 (16-59)||(16905218-16905261)
chr4 (16-59)||(16918158-16918201)
chr4 (16-59)||(30825192-30825235)
chr4 (16-59)||(31966239-31966282)
chr4 (16-59)||(39058622-39058665)
chr4 (16-59)||(45977264-45977307)
chr4 (16-59)||(47143070-47143113)
chr4 (16-59)||(48118802-48118845)
chr4 (16-59)||(52098460-52098503)
chr4 (16-59)||(52434540-52434583)
chr4 (16-59)||(53143534-53143577)
chr4 (16-59)||(54624879-54624922)
chr4 (89-135)||(34684603-34684649)
chr4 (16-56)||(50229979-50230019)
chr4 (16-59)||(41387042-41387085)
chr4 (16-59)||(44376347-44376390)
chr4 (22-59)||(45782697-45782734)
[»] chr8 (58 HSPs)
chr8 (11-244)||(11725188-11725421)
chr8 (11-240)||(18568863-18569092)
chr8 (17-243)||(28582859-28583085)
chr8 (11-242)||(18841902-18842133)
chr8 (11-242)||(44836907-44837138)
chr8 (11-249)||(10477935-10478173)
chr8 (11-243)||(30473883-30474115)
chr8 (11-242)||(15961130-15961361)
chr8 (11-242)||(24408874-24409105)
chr8 (11-218)||(39257441-39257648)
chr8 (11-244)||(18997698-18997931)
chr8 (21-242)||(35122322-35122543)
chr8 (11-243)||(18175379-18175611)
chr8 (11-243)||(32110860-32111092)
chr8 (11-219)||(40026798-40027006)
chr8 (11-243)||(44832185-44832417)
chr8 (11-242)||(6299020-6299251)
chr8 (11-245)||(995812-996046)
chr8 (11-219)||(28274237-28274445)
chr8 (11-237)||(11142459-11142691)
chr8 (11-203)||(19412829-19413022)
chr8 (11-191)||(19240661-19240841)
chr8 (11-191)||(19313845-19314025)
chr8 (16-210)||(18210656-18210850)
chr8 (48-243)||(39997726-39997921)
chr8 (11-179)||(24004790-24004958)
chr8 (11-131)||(23353688-23353808)
chr8 (11-210)||(25875322-25875530)
chr8 (11-73)||(18481929-18481991)
chr8 (187-242)||(23353622-23353677)
chr8 (11-59)||(39997660-39997708)
chr8 (193-242)||(19241006-19241055)
chr8 (193-242)||(19314190-19314239)
chr8 (16-59)||(6299290-6299333)
chr8 (16-59)||(10477853-10477896)
chr8 (16-59)||(11142381-11142424)
chr8 (16-59)||(11725106-11725149)
chr8 (16-59)||(18175297-18175340)
chr8 (16-59)||(18997616-18997659)
chr8 (16-59)||(19240580-19240623)
chr8 (16-59)||(19313764-19313807)
chr8 (16-59)||(19412752-19412795)
chr8 (16-59)||(23353846-23353889)
chr8 (16-59)||(24408795-24408838)
chr8 (16-59)||(30474153-30474196)
chr8 (16-59)||(32111131-32111174)
chr8 (16-59)||(35122585-35122628)
chr8 (16-59)||(39997580-39997623)
chr8 (16-59)||(44832457-44832500)
chr8 (16-59)||(44836824-44836867)
chr8 (17-59)||(18210893-18210935)
chr8 (16-59)||(996085-996128)
chr8 (16-59)||(18841829-18841872)
chr8 (16-59)||(25875567-25875610)
chr8 (16-59)||(28582777-28582820)
chr8 (20-59)||(39257362-39257401)
chr8 (205-242)||(40169720-40169757)
chr8 (81-117)||(4476885-4476921)
[»] chr2 (32 HSPs)
chr2 (11-244)||(8700259-8700492)
chr2 (11-243)||(19596362-19596594)
chr2 (11-240)||(31424007-31424236)
chr2 (11-242)||(41664508-41664739)
chr2 (11-243)||(6120550-6120782)
chr2 (11-243)||(18351549-18351781)
chr2 (11-242)||(41663235-41663466)
chr2 (11-240)||(26231261-26231490)
chr2 (11-242)||(42055197-42055428)
chr2 (11-242)||(44902080-44902310)
chr2 (16-245)||(20544828-20545057)
chr2 (11-211)||(999262-999462)
chr2 (11-242)||(36279455-36279685)
chr2 (16-242)||(34007714-34007935)
chr2 (11-242)||(42441958-42442193)
chr2 (11-201)||(16214822-16215012)
chr2 (89-243)||(27944795-27944949)
chr2 (76-217)||(692227-692368)
chr2 (16-59)||(19596634-19596677)
chr2 (16-59)||(6120467-6120510)
chr2 (16-59)||(16214741-16214784)
chr2 (16-59)||(18351467-18351510)
chr2 (16-59)||(26231527-26231570)
chr2 (16-59)||(31423924-31423967)
chr2 (16-59)||(34007980-34008023)
chr2 (16-59)||(41663152-41663195)
chr2 (16-59)||(42441876-42441919)
chr2 (16-59)||(999500-999543)
chr2 (16-59)||(36279723-36279766)
chr2 (16-59)||(41664426-41664469)
chr2 (16-59)||(44901998-44902041)
chr2 (198-242)||(25889039-25889083)
[»] chr1 (39 HSPs)
chr1 (11-243)||(9216029-9216261)
chr1 (11-245)||(34888683-34888917)
chr1 (11-242)||(4266379-4266610)
chr1 (11-242)||(38913747-38913978)
chr1 (11-245)||(23482704-23482938)
chr1 (11-237)||(35614065-35614291)
chr1 (11-243)||(7333942-7334174)
chr1 (11-242)||(18706509-18706739)
chr1 (11-242)||(38444629-38444860)
chr1 (11-243)||(18855232-18855463)
chr1 (11-242)||(2951366-2951597)
chr1 (30-242)||(1231813-1232025)
chr1 (11-202)||(39727978-39728169)
chr1 (11-218)||(50151058-50151265)
chr1 (16-242)||(52687114-52687339)
chr1 (16-203)||(35614819-35615005)
chr1 (21-199)||(19764593-19764771)
chr1 (89-242)||(31018200-31018353)
chr1 (89-240)||(50326077-50326228)
chr1 (11-147)||(2590333-2590468)
chr1 (11-151)||(19768462-19768602)
chr1 (148-242)||(29942153-29942247)
chr1 (125-209)||(5061335-5061419)
chr1 (193-242)||(52957056-52957105)
chr1 (16-59)||(1231725-1231768)
chr1 (16-59)||(2951636-2951679)
chr1 (16-59)||(4266297-4266340)
chr1 (16-59)||(18706773-18706816)
chr1 (16-59)||(19764814-19764857)
chr1 (16-59)||(19768382-19768425)
chr1 (16-59)||(23482972-23483015)
chr1 (16-59)||(35614734-35614777)
chr1 (16-59)||(38914017-38914060)
chr1 (16-59)||(52036310-52036353)
chr1 (199-245)||(2590466-2590512)
chr1 (16-56)||(7333863-7333903)
chr1 (16-59)||(35613984-35614027)
chr1 (16-59)||(38444549-38444592)
chr1 (16-59)||(52687381-52687424)
[»] chr5 (45 HSPs)
chr5 (11-242)||(20655049-20655280)
chr5 (11-243)||(5479194-5479426)
chr5 (11-242)||(33375760-33375993)
chr5 (11-244)||(38246863-38247096)
chr5 (11-243)||(34107337-34107569)
chr5 (11-242)||(20874686-20874917)
chr5 (11-242)||(34110650-34110881)
chr5 (11-249)||(1395987-1396225)
chr5 (11-244)||(16526304-16526537)
chr5 (11-243)||(10729441-10729673)
chr5 (11-233)||(25099245-25099467)
chr5 (11-233)||(25158335-25158557)
chr5 (11-243)||(2398941-2399171)
chr5 (11-242)||(17373161-17373395)
chr5 (11-203)||(27647928-27648120)
chr5 (11-220)||(24223186-24223395)
chr5 (11-206)||(29275622-29275817)
chr5 (11-200)||(6940545-6940734)
chr5 (11-207)||(33570342-33570538)
chr5 (11-185)||(1394543-1394717)
chr5 (11-191)||(14141158-14141338)
chr5 (16-183)||(17913744-17913911)
chr5 (99-242)||(40177127-40177270)
chr5 (16-59)||(1395907-1395950)
chr5 (16-59)||(2399210-2399253)
chr5 (16-59)||(5479115-5479158)
chr5 (16-59)||(6940768-6940811)
chr5 (187-242)||(8179753-8179808)
chr5 (16-59)||(10729712-10729755)
chr5 (16-59)||(14141377-14141420)
chr5 (16-59)||(16526577-16526620)
chr5 (16-59)||(17373434-17373477)
chr5 (16-59)||(20874604-20874647)
chr5 (16-59)||(24223434-24223477)
chr5 (16-59)||(27647845-27647888)
chr5 (16-59)||(33570578-33570621)
chr5 (16-59)||(34107608-34107651)
chr5 (16-59)||(34110566-34110609)
chr5 (16-59)||(38247135-38247178)
chr5 (16-59)||(40177033-40177076)
chr5 (16-59)||(1394750-1394793)
chr5 (16-59)||(25158594-25158637)
chr5 (16-59)||(33375680-33375723)
chr5 (203-244)||(19391258-19391299)
chr5 (16-56)||(29275540-29275580)
[»] scaffold0173 (1 HSPs)
scaffold0173 (11-245)||(19345-19579)
[»] scaffold0031 (1 HSPs)
scaffold0031 (11-244)||(46272-46505)
[»] scaffold0022 (2 HSPs)
scaffold0022 (11-242)||(149050-149281)
scaffold0022 (16-59)||(149318-149361)
[»] scaffold0515 (1 HSPs)
scaffold0515 (71-242)||(6061-6232)
[»] scaffold0306 (1 HSPs)
scaffold0306 (71-242)||(6071-6242)
[»] scaffold0836 (1 HSPs)
scaffold0836 (90-242)||(5278-5430)


Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 21669979 - 21670210
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  21669979 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 21670078  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  21670079 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 21670178  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    ||| |||||| ||||| |||||||||||||||    
T  21670179 acctgtgcggcagcacgggtggaaagtctagt 21670210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 16376776 - 16376543
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  16376776 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 16376677  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  16376676 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 16376577  T
Q  211 acccgtgcggtagcacaggtggaaagtctagttt 244  Q
    |||||||||| ||||| |||||||||||||||||    
T  16376576 acccgtgcggcagcacgggtggaaagtctagttt 16376543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 11 - 248
Target Start/End: Original strand, 21656626 - 21656863
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  21656626 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 21656725  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||  |||||||| ||||||||    
T  21656726 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctacttcatctacagtgtatatg 21656825  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtttatta 248  Q
    ||||||| |||||||| ||||||||||||||| |||||    
T  21656826 acccgtgtggtagcacgggtggaaagtctagtatatta 21656863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 11 - 240
Target Start/End: Complemental strand, 43933775 - 43933546
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  43933775 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 43933676  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  43933675 gttcgaattccaacatctgcatatatttgggaccacatattttattctcttttatatgcattgagatttttttttgtctactacatctacaatgtatatg 43933576  T
Q  211 acccgtgcggtagcacaggtggaaagtcta 240  Q
    |||| ||||||||||| |||||||||||||    
T  43933575 acccttgcggtagcacgggtggaaagtcta 43933546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 40968889 - 40969122
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  40968889 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 40968988  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| | ||||| ||||||||||||||||||    
T  40968989 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttgtgtctactacatctacaatgtatatg 40969088  T
Q  211 acccgtgcggtagcacaggtggaaagtctagttt 244  Q
    |||||||||| ||||| |||||||||||||||||    
T  40969089 acccgtgcggcagcacgggtggaaagtctagttt 40969122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 13786168 - 13786399
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||| |||||||| |||||||||||||    
T  13786168 ccaataatataacattgacatataattttaacaaaaaaatgaagtaagacgcgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 13786267  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  13786268 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 13786367  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  13786368 acccgtgcggcagcacgggtggaaagtctagt 13786399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 15109896 - 15109664
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||  ||||||| |||||||||||||    
T  15109896 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatacttttaagatgaataagtgtggtgtctgag 15109797  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  15109796 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 15109697  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
     || ||||| |||||| ||||||||||||||||    
T  15109696 tccggtgcgatagcacgggtggaaagtctagtt 15109664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 21804803 - 21804571
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  21804803 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 21804704  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  21804703 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 21804604  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  21804603 acccgtgcggcagcacgggtggaaagtctagtt 21804571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 27903648 - 27903416
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| |||||||| ||||    
T  27903648 ccaataatataacattgacatagaattttaacaaaagaatgaagtaagacacgattggtaaaaattaatatttttaaggtgaataagtgtggtgtatgag 27903549  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||||||    
T  27903548 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatatatatg 27903449  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  27903448 acccgtgcggcagcacgggtggaaagtctagtt 27903416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 42242385 - 42242153
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  42242385 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 42242286  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  42242285 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 42242186  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  42242185 acccgtgcggcagcacgggtggaaagtctagtt 42242153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 38163570 - 38163339
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  38163570 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38163471  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  38163470 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38163371  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  38163370 acccgtgcggcagcacgggtggaaagtctagt 38163339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 16 - 244
Target Start/End: Complemental strand, 3840867 - 3840639
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcg 115  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||    
T  3840867 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 3840768  T
Q  116 aattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccg 215  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||| ||    
T  3840767 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgactcg 3840668  T
Q  216 tgcggtagcacaggtggaaagtctagttt 244  Q
    ||||| ||||| |||||||||||||||||    
T  3840667 tgcggcagcacgggtggaaagtctagttt 3840639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 33917178 - 33916946
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  33917178 ccaataatataatattgacatataattttaacaaaagaatgaaataacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 33917079  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  33917078 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 33916979  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  33916978 acccgtgcggcagcacgggtggaaagtctagtt 33916946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 11 - 226
Target Start/End: Original strand, 24924077 - 24924292
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  24924077 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaatttaatatttttaaggtgaataagtgtggtgtctgag 24924176  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||| ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  24924177 gttcaaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 24924276  T
Q  211 acccgtgcggtagcac 226  Q
    |||||||||| |||||    
T  24924277 acccgtgcggcagcac 24924292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 21341821 - 21342052
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  21341821 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 21341920  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||||||||||||||||||||||  ||| |||||||| |||||||||||||||||||||||||||||||| ||||  | ||||||||||||||||    
T  21341921 gttcgaattccaacatctgcatatatttgagactacatatttcattctctttgatatgcattgagatttatttttgtctattatatctacaatgtatatg 21342020  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  21342021 acccgtgcggcagcacgggtggaaagtctagt 21342052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 27138759 - 27138528
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  27138759 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 27138660  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||| ||||||||||    
T  27138659 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctagaatgtatatg 27138560  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    ||| |||||| ||||| |||||||||||||||    
T  27138559 acctgtgcggcagcacgggtggaaagtctagt 27138528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 11 - 246
Target Start/End: Original strand, 31373454 - 31373689
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  31373454 ccaataatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 31373553  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||  | ||||||||||||||||    
T  31373554 gttcgaatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 31373653  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtttat 246  Q
    |||||||||| ||||| |||||||||||||||||||    
T  31373654 acccgtgcggcagcacgggtggaaagtctagtttat 31373689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 17178469 - 17178237
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaag-tgaataaatgtggtgtctga 109  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||   | ||||||| ||||||||||||    
T  17178469 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacccgattgataaaaattaatattttttttggtgaataagtgtggtgtctga 17178370  T
Q  110 ggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatat 209  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||||| ||||| | |||||||||||||||    
T  17178369 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgaattgagatttgtttttgtctactatatctacaatgtatat 17178270  T
Q  210 gacccgtgcggtagcacaggtggaaagtctagt 242  Q
    ||||| ||||| ||||| |||||||||||||||    
T  17178269 gacccatgcggcagcacgggtggaaagtctagt 17178237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 21753723 - 21753524
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||| ||    
T  21753723 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctaag 21753624  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||  |||||||||||||||||  |||||||| |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  21753623 gttcgaattttaacatctgcatatatttgagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 21753524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 48 - 218
Target Start/End: Complemental strand, 39030446 - 39030276
Alignment:
Q  48 aatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccaca 147  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39030446 aatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccaca 39030347  T
Q  148 tattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgc 218  Q
    | ||||||||||||||||||||||||| |||| ||||| ||||| ||||||||||| ||||||||||||||    
T  39030346 tgttttattctctttgatatgcattgaaatttgtttttgtctactacatctacaatatatatgacccgtgc 39030276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 31096698 - 31096748
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacaca 61  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  31096698 ccaataatataatattgacatataattttaacaaaagaatgaagtaacaca 31096748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 3840955 - 3840912
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  3840955 aatataacattaacatataatttttacaaaagaatgaagtaaca 3840912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 16376855 - 16376812
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    |||||||||||||||||||||||| |||||| ||||||||||||    
T  16376855 aatataacattgacatataatttttacaaaataatgaagtaaca 16376812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 17178551 - 17178508
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  17178551 aatataacattaacatataatttttacaaaagaatgaagtaaca 17178508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 21341737 - 21341780
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  21341737 aatataacattaacatataatttttacaaaagaatgaagtaaca 21341780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 21656547 - 21656590
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  21656547 aatataacattaacatataatttttacaaaagaatgaagtaaca 21656590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 21669895 - 21669938
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  21669895 aatataacattaacatataatttttacaaaagaatgaagtaaca 21669938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 21804885 - 21804842
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  21804885 aatataacattaacatataatttttacaaaagaatgaagtaaca 21804842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 27138841 - 27138798
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  27138841 aatataacattaacatataatttttacaaaagaatgaagtaaca 27138798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 31373370 - 31373413
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  31373370 aatataacattaacatataatttttacaaaagaatgaagtaaca 31373413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 33917260 - 33917217
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  33917260 aatataacattaacatataatttttacaaaagaatgaagtaaca 33917217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 42242467 - 42242424
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  42242467 aatataacattaacatataatttttacaaaagaatgaagtaaca 42242424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 43933856 - 43933815
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaa 57  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  43933856 aatataacattaacatataatttttacaaaagaatgaagtaa 43933815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 24924001 - 24924041
Alignment:
Q  19 ataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  24924001 ataacattaacatataatttttacaaaagaatgaagtaaca 24924041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 15109973 - 15109930
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  15109973 aatataatattaacatataatttttacaaaagaatgaagtaaca 15109930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 21753803 - 21753760
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||    
T  21753803 aatataacattaacatataatttttacaaaataatgaagtaaca 21753760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 27903729 - 27903686
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||    
T  27903729 aatataacattaacatataatttttacaaaataatgaagtaaca 27903686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 31096615 - 31096658
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||| | |||||||||||||||||||    
T  31096615 aatataacattaacatataattcttacaaaagaatgaagtaaca 31096658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 21681073 - 21681119
Alignment:
Q  177 tttatttttatctaccacatctacaatgtatatgacccgtgcggtag 223  Q
    ||||||||| ||||| |||| ||| ||||||||||||||||||||||    
T  21681073 tttatttttgtctactacatttacgatgtatatgacccgtgcggtag 21681119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 21713643 - 21713687
Alignment:
Q  182 ttttatctaccacatctacaatgtatatgacccgtgcggtagcac 226  Q
    |||||||||| ||||||||  |||||||||||| |||||||||||    
T  21713643 ttttatctactacatctacggtgtatatgacccatgcggtagcac 21713687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 39146438 - 39146667
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  39146438 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 39146537  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  39146538 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatg 39146637  T
Q  211 acccgtgcggtagcacaggtggaaagtcta 240  Q
    |||||||||| | ||||| |||||||||||    
T  39146638 acccgtgcggcaacacagatggaaagtcta 39146667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 26948796 - 26949027
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  26948796 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgag 26948895  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  26948896 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 26948995  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  26948996 acccgtgcggcagcacgggtggaaagtctagt 26949027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 20671247 - 20671479
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  20671247 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 20671346  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  20671347 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 20671446  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    || |||| || ||||| ||||||||||||||||    
T  20671447 actcgtgtggcagcacgggtggaaagtctagtt 20671479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 36076685 - 36076453
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||     
T  36076685 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaa 36076586  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  36076585 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatatg 36076486  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  36076485 acccgtgcggcagcacgggtggaaagtctagtt 36076453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 4584665 - 4584434
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  4584665 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 4584566  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  4584565 gttcaaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 4584466  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  4584465 acccgtgcggcagcacgggtggaaagtctagt 4584434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 11 - 249
Target Start/End: Complemental strand, 43363842 - 43363604
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  43363842 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 43363743  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  43363742 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 43363643  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtttattat 249  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  43363642 acccgtgcggcagcacgggtggaaagtctagtttattat 43363604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 31488409 - 31488638
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  31488409 ccaataatataacattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 31488508  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||     
T  31488509 gttcgaattccaacatctgcatatatttgggacaacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatata 31488608  T
Q  211 acccgtgcggtagcacaggtggaaagtcta 240  Q
    |||||||||| ||||| | |||||||||||    
T  31488609 acccgtgcggcagcacggatggaaagtcta 31488638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 12264198 - 12264430
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  12264198 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 12264297  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  12264298 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 12264397  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  12264398 acccgtgcggcagcacgggtggaaagtctagtt 12264430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 38654158 - 38653926
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  38654158 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38654059  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  38654058 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38653959  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  38653958 acccgtgcggcagcacgggtggaaagtctagtt 38653926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 49672560 - 49672791
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  49672560 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 49672659  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  49672660 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 49672759  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  49672760 acccgtgcggcagcacgggtggaaagtctagt 49672791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 45558115 - 45557883
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  45558115 ccaataatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 45558016  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||| ||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||||||    
T  45558015 gttcgaatttcaacatctgcatatacttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatatatatg 45557916  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    ||| || ||||||||| ||||||||||||||||    
T  45557915 acctgtacggtagcactggtggaaagtctagtt 45557883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 1941951 - 1941720
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||| ||||||||    
T  1941951 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtgatgtctgag 1941852  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  1941851 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 1941752  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  1941751 acccgtgcggcagcacgggtggaaagtctagt 1941720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 21098302 - 21098533
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  21098302 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 21098401  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||  | ||||||||||||||||    
T  21098402 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 21098501  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  21098502 acccgtgcggcagcacgggtggaaagtctagt 21098533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 34121353 - 34121584
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  34121353 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34121452  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  34121453 gttcgaattccaacatctgcatatatttgggaccacgtatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34121552  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  34121553 acccgtgcggcagcacgggtggaaagtctagt 34121584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 49478206 - 49478437
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  49478206 ccaataatataacattgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 49478305  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||| ||||||||||| ||||||||||||| ||| ||||||||||| |||||||||| ||||||||||| || ||||||||||| |||    
T  49478306 gttcgaattccaacatttgcatatatttgggaccacatatttcattatctttgatatgtattgagatttgtttttatctactacgtctacaatgtaaatg 49478405  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    || ||||||| ||||| |||||||||||||||    
T  49478406 actcgtgcggcagcacgggtggaaagtctagt 49478437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 49506580 - 49506348
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  49506580 ccaataatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 49506481  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  49506480 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 49506381  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| || || ||||||||||||||||    
T  49506380 acccgtgcggcagtacgggtggaaagtctagtt 49506348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 3898420 - 3898651
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  3898420 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 3898519  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||| ||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  3898520 gttcaaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactatatctacaatgtatatg 3898619  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  3898620 acccgtgcggcagcacgggtggaaagtctagt 3898651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 11 - 237
Target Start/End: Complemental strand, 55041820 - 55041588
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaat------taatatttttaaagtgaataaatgtggtg 104  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||      |||||||||||| |||||||| |||||||    
T  55041820 ccaataatataacattgacatataattttaacaaaagagtgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtg 55041721  T
Q  105 tctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatg 204  Q
    |||||||||||||||| ||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  55041720 tctgaggttcgaattcaaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatg 55041621  T
Q  205 tatatgacccgtgcggtagcacaggtggaaagt 237  Q
    |||||||||||||||||||||| ||||||||||    
T  55041620 tatatgacccgtgcggtagcacgggtggaaagt 55041588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 54073025 - 54073259
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  54073025 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 54073124  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatg---tat 207  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||   |||    
T  54073125 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtactat 54073224  T
Q  208 atgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    ||||||||||||| ||||| |||||||||||||||    
T  54073225 atgacccgtgcggcagcacgggtggaaagtctagt 54073259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 24119205 - 24119394
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  24119205 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 24119304  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctac 200  Q
    ||| |||||||||||||||||||||||| |||||| |||||| ||| ||||| |||||||||||||||| ||||| ||||| ||||||||    
T  24119305 gtttgaattccaacatctgcatatatttgggaccatatatttcattatctttaatatgcattgagatttgtttttgtctactacatctac 24119394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 40014837 - 40014653
Alignment:
Q  58 cacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattc 157  Q
    ||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  40014837 cacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattc 40014738  T
Q  158 tctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||||||||||||||| ||||| | ||  | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  40014737 tctttgatatgcattgagatttgtttttgtttattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 40014653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 76 - 210
Target Start/End: Complemental strand, 26051469 - 26051334
Alignment:
Q  76 taatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttagg-accacatattttattctctttgatatgcattga 174  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||| || |||||||||| || ||||||||||| |||||||||||||||||||||    
T  26051469 taatatttttaaggtgaataagcgtggtgtctgaggttcgaattccaacctcagcatatatttggggaccacatatttcattctctttgatatgcattga 26051370  T
Q  175 gatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||| ||||| ||||| ||||||||||||||||||    
T  26051369 gatttgtttttgtctactacatctacaatgtatatg 26051334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 140 - 243
Target Start/End: Complemental strand, 6460269 - 6460167
Alignment:
Q  140 ggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtct 239  Q
    ||||||||||||||||||| ||||||||| |||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||    
T  6460269 ggaccacatattttattct-tttgatatgtattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtct 6460171  T
Q  240 agtt 243  Q
    ||||    
T  6460170 agtt 6460167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 26052309 - 26052236
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttt 84  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26052309 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttt 26052236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 1942033 - 1941990
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  1942033 aatataacattaacatataatttttacaaaagaatgaagtaaca 1941990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 3898338 - 3898381
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  3898338 aatataacattaacatataatttttacaaaagaatgaagtaaca 3898381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 12264115 - 12264158
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  12264115 aatataacattaacatataatttttacaaaagaatgaagtaaca 12264158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 20671166 - 20671209
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  20671166 aatataacattaacatataatttttacaaaagaatgaagtaaca 20671209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 21098219 - 21098262
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  21098219 aatataacattaacatataatttttacaaaagaatgaagtaaca 21098262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 26052392 - 26052349
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  26052392 aatataacattaacatataatttttacaaaagaatgaagtaaca 26052349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 26948689 - 26948732
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  26948689 aatataacattaacatataatttttacaaaagaatgaagtaaca 26948732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 31488329 - 31488372
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  31488329 aatataacattaacatataatttttacaaaagaatgaagtaaca 31488372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 34121271 - 34121314
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  34121271 aatataacattaacatataatttttacaaaagaatgaagtaaca 34121314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 38654241 - 38654198
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  38654241 aatataacattaacatataatttttacaaaagaatgaagtaaca 38654198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 43363924 - 43363881
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  43363924 aatataacattaacatataatttttacaaaagaatgaagtaaca 43363881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 49478124 - 49478167
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  49478124 aatataacattaacatataatttttacaaaagaatgaagtaaca 49478167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 49672478 - 49672521
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  49672478 aatataacattaacatataatttttacaaaagaatgaagtaaca 49672521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 55041901 - 55041858
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  55041901 aatataacattaacatataatttttacaaaagaatgaagtaaca 55041858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 36076764 - 36076723
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaa 57  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  36076764 aatataacattaacatataatttttacaaaagaatgaagtaa 36076723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 24119126 - 24119169
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    |||||||| || |||||||||||| |||||||||||||||||||    
T  24119126 aatataactttaacatataatttttacaaaagaatgaagtaaca 24119169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 39146363 - 39146406
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||    
T  39146363 aatataacattaacatataatttttacaaaataatgaagtaaca 39146406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 45558196 - 45558153
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||    
T  45558196 aatataacattaacatataatttttacaaaaaaatgaagtaaca 45558153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 13364076 - 13364022
Alignment:
Q  188 ctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||| |||| ||||||||||||||||||||||| |||| ||||| || |||||||    
T  13364076 ctactacatatacaatgtatatgacccgtgcggcagcagaggtgaaatgtctagt 13364022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 37099708 - 37099764
Alignment:
Q  177 tttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtgga 233  Q
    |||| |||| ||||| |||  ||||||||||||||||||||||| ||||| ||||||    
T  37099708 tttacttttgtctactacacttacaatgtatatgacccgtgcggcagcacgggtgga 37099764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 41798957 - 41798993
Alignment:
Q  81 tttttaaagtgaataaatgtggtgtctgaggttcgaa 117  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  41798957 tttttaaagtgaataaatgaggtgtctgaagttcgaa 41798993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 242
Target Start/End: Original strand, 15044725 - 15044951
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcg 115  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  15044725 aatataacattgacatataattttaacaaaagaatgaagtaaaacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 15044824  T
Q  116 aattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccg 215  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| |    
T  15044825 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgaaatttatttttgtctactacatctacaatgtatatgacctg 15044924  T
Q  216 tgcggtagcacaggtggaaagtctagt 242  Q
    ||||| ||||| |||||||||||||||    
T  15044925 tgcggcagcacgggtggaaagtctagt 15044951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 17 - 242
Target Start/End: Original strand, 13533771 - 13533996
Alignment:
Q  17 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcga 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  13533771 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 13533870  T
Q  117 attccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgt 216  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  13533871 attccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatgacccgt 13533970  T
Q  217 gcggtagcacaggtggaaagtctagt 242  Q
    |||| ||||| |||||||| ||||||    
T  13533971 gcggcagcacgggtggaaaatctagt 13533996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 11 - 245
Target Start/End: Original strand, 17202430 - 17202664
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  17202430 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 17202529  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||| | ||| ||||| ||||||||||||||||||    
T  17202530 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgtgatttgtatttgtctactacatctacaatgtatatg 17202629  T
Q  211 acccgtgcggtagcacaggtggaaagtctagttta 245  Q
    ||  |||||| ||||| ||||||||||||||||||    
T  17202630 acttgtgcggcagcacgggtggaaagtctagttta 17202664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 2005426 - 2005657
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  2005426 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 2005525  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||| |||||  |||||||||||||||||    
T  2005526 gttcgaattccaacatctgcatatatttaagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactgcatctacaatgtatatg 2005625  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    ||||||||||  ||||  ||||||||||||||    
T  2005626 acccgtgcggccgcacgagtggaaagtctagt 2005657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 3592891 - 3593124
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||    
T  3592891 ccaataatataacattgagatataattttaacaaaagaatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgag 3592990  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||||||||||||| |||||||| ||| ||||||||| |||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  3592991 gttcgaattccaacatctgaatatatttgggatcacatatttcattctcttggatatgcattgagatttgtttttgtctactacatctacaatgtatatg 3593090  T
Q  211 acccgtgcggtagcacaggtggaaagtctagttt 244  Q
    |||||||||| ||||| |||||||||||||||||    
T  3593091 acccgtgcggcagcacgggtggaaagtctagttt 3593124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 12597496 - 12597263
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  12597496 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 12597397  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  12597396 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 12597297  T
Q  211 acccgtgcggtagcacaggtggaaagtctagttt 244  Q
    |||||||||| ||||| |||||||||||||||||    
T  12597296 acccgtgcggcagcacgggtggaaagtctagttt 12597263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 10584959 - 10584728
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||    
T  10584959 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgag 10584860  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||||||    
T  10584859 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatatg 10584760  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||| |  || ||||| |||||||||||||||    
T  10584759 acccatatggcagcacgggtggaaagtctagt 10584728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 19997663 - 19997892
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  19997663 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 19997762  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  19997763 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 19997862  T
Q  211 acccgtgcggtagcacaggtggaaagtcta 240  Q
    |||||||||| ||||| |||||||||||||    
T  19997863 acccgtgcggcagcacgggtggaaagtcta 19997892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 33645940 - 33646171
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  33645940 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 33646039  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  33646040 gttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 33646139  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  33646140 acccgtgcggcagcacgggtggaaagtctagt 33646171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 28099828 - 28099597
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  28099828 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 28099729  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||  | ||||||||||||||||    
T  28099728 gttcgaattccaacatcagcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 28099629  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  28099628 acccgtgcggcagcacgggtggaaagtctagt 28099597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 11 - 245
Target Start/End: Original strand, 2266766 - 2267008
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtgg-------- 102  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||            
T  2266766 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtcgtgg 2266865  T
Q  103 tgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaa 202  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||    
T  2266866 tgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 2266965  T
Q  203 tgtatatgacccgtgcggtagcacaggtggaaagtctagttta 245  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  2266966 tgtatatgacccgtgcggcagcacgggtggaaagtctagttta 2267008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 8539598 - 8539725
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  8539598 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 8539697  T
Q  111 gttcgaattccaacatctgcatatattt 138  Q
    ||||||||||||||||||||||||||||    
T  8539698 gttcgaattccaacatctgcatatattt 8539725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 11 - 175
Target Start/End: Original strand, 17594814 - 17594979
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatt-aatatttttaaagtgaataaatgtggtgtctga 109  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||    
T  17594814 ccaataatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaatttaatatttttaaggtgaataagtgtggtgtctga 17594913  T
Q  110 ggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgag 175  Q
     ||| ||||| |||||||| ||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  17594914 agtttgaatttcaacatctccatatatttgggaccacatatttcattttctttgatatgcattgag 17594979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 117 - 243
Target Start/End: Complemental strand, 1405688 - 1405562
Alignment:
Q  117 attccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgt 216  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||||| |||| ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  1405688 attccaacatctgcatatatttgggatcacatatttcattctctttaatatacattgagatttgtttttatctactacatctacaatgtatatgacccgt 1405589  T
Q  217 gcggtagcacaggtggaaagtctagtt 243  Q
    |||| ||||| |||||||| |||||||    
T  1405588 gcggcagcacgggtggaaaatctagtt 1405562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 11 - 138
Target Start/End: Original strand, 25448747 - 25448874
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||   ||||||||  ||||||||||||    
T  25448747 ccaataatataatattgacatataattttaacaaaaaaatgaagtaacacacgattgataaaaattaatatatttttggtgaataagcgtggtgtctgag 25448846  T
Q  111 gttcgaattccaacatctgcatatattt 138  Q
     ||||||||||||||||| |||||||||    
T  25448847 tttcgaattccaacatctacatatattt 25448874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 103 - 206
Target Start/End: Original strand, 33035523 - 33035626
Alignment:
Q  103 tgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaa 202  Q
    |||||||| ||||||||||| |||||||||||||||  |||||||| ||||||||||||||| |||||||||||||| ||||| ||||| ||||||||||    
T  33035523 tgtctgagattcgaattccagcatctgcatatatttgagaccacatgttttattctctttgacatgcattgagatttgtttttgtctactacatctacaa 33035622  T
Q  203 tgta 206  Q
    ||||    
T  33035623 tgta 33035626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 8539727 - 8539789
Alignment:
Q  187 tctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtttattat 249  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  8539727 tctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtatattat 8539789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 2266684 - 2266727
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  2266684 aatataacattaacatataatttttacaaaagaatgaagtaaca 2266727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 10585039 - 10584996
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  10585039 aatataacattaacatataatttttacaaaagaatgaagtaaca 10584996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 12597578 - 12597535
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  12597578 aatataacattaacatataatttttacaaaagaatgaagtaaca 12597535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 15044639 - 15044682
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  15044639 aatataacattaacatataatttttacaaaagaatgaagtaaca 15044682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 17202348 - 17202391
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  17202348 aatataacattaacatataatttttacaaaagaatgaagtaaca 17202391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 17594733 - 17594776
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  17594733 aatataacattaacatataatttttacaaaagaatgaagtaaca 17594776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 19997580 - 19997623
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  19997580 aatataacattaacatataatttttacaaaagaatgaagtaaca 19997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 28099911 - 28099868
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  28099911 aatataacattaacatataatttttacaaaagaatgaagtaaca 28099868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 33645858 - 33645901
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  33645858 aatataacattaacatataatttttacaaaagaatgaagtaaca 33645901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 162710 - 162668
Alignment:
Q  201 aatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||||||||||||| ||||| ||||||||||||||||    
T  162710 aatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 162668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 2005348 - 2005391
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||    
T  2005348 aatataacattaacatataatttttacaaaataatgaagtaaca 2005391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 3589064 - 3589107
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||    
T  3589064 aatataacattaacatataatttttacaaaagagtgaagtaaca 3589107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 3592087 - 3592130
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||    
T  3592087 aatataacattaacatataatttttacaaaagaatgaaataaca 3592130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 3592812 - 3592855
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    |||| |||||| |||||||||||| |||||||||||||||||||    
T  3592812 aatacaacattaacatataatttttacaaaagaatgaagtaaca 3592855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 25448665 - 25448708
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||    
T  25448665 aatataacattaacatataatttttacaaaagaataaagtaaca 25448708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 6300753 - 6300709
Alignment:
Q  198 tacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    ||||||||||||||||||||||| ||||| |||| | ||||||||    
T  6300753 tacaatgtatatgacccgtgcggcagcacgggtgcatagtctagt 6300709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 6307563 - 6307519
Alignment:
Q  198 tacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    ||||||||||||||||||||||| ||||| |||| | ||||||||    
T  6307563 tacaatgtatatgacccgtgcggcagcacgggtgcatagtctagt 6307519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 8539523 - 8539559
Alignment:
Q  23 cattgacatataattttaacaaaagaatgaagtaaca 59  Q
    |||| |||||||||||| |||||||||||||||||||    
T  8539523 cattaacatataatttttacaaaagaatgaagtaaca 8539559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 17 - 243
Target Start/End: Complemental strand, 16905177 - 16904951
Alignment:
Q  17 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcga 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  16905177 atataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 16905078  T
Q  117 attccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgt 216  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  16905077 attccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgt 16904978  T
Q  217 gcggtagcacaggtggaaagtctagtt 243  Q
    |||| ||||| ||||||||||||||||    
T  16904977 gcggcagcacgggtggaaagtctagtt 16904951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 33139702 - 33139471
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33139702 ccaataatataacattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataaatgtggtgtctgag 33139603  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  33139602 gttcgaattccaacatctgcatatatttgggacaacatatttaattctctttgatatgcattgagatttgtttttgtctactaaatctacaatgtatatg 33139503  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  33139502 acccgtgcggcagcacgggtggaaagtctagt 33139471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 11 - 240
Target Start/End: Complemental strand, 45977221 - 45976992
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||    
T  45977221 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 45977122  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  45977121 gttcgaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgatatttatttttatctactacatctacgatgtatatg 45977022  T
Q  211 acccgtgcggtagcacaggtggaaagtcta 240  Q
    |||||||| | ||||| | |||||||||||    
T  45977021 acccgtgcagcagcacggatggaaagtcta 45976992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 46256032 - 46256261
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  46256032 ccaataatataacattgacatataattttaacaaaagaatgaagtaagatacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 46256131  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  46256132 gttccaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 46256231  T
Q  211 acccgtgcggtagcacaggtggaaagtcta 240  Q
    |||||||||| ||||| |||||||||||||    
T  46256232 acccgtgcggcagcacgggtggaaagtcta 46256261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 35760585 - 35760811
Alignment:
Q  17 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcga 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||    
T  35760585 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataattgtggtgtttgaggttcga 35760684  T
Q  117 attccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgt 216  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||| |||    
T  35760685 attccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttatttttatctactatatctacaatgtatatgactcgt 35760784  T
Q  217 gcggtagcacaggtggaaagtctagtt 243  Q
    |||| ||||| |||||||| |||||||    
T  35760785 gcggcagcacgggtggaaaatctagtt 35760811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 16918119 - 16917887
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  16918119 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 16918020  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  16918019 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 16917920  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||||||||||||||||||||    
T  16917919 acccgtgcggcagcacaggtggaaagtctagtt 16917887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 37591035 - 37590804
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  37591035 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 37590936  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||| ||||| ||||||||||||||||||    
T  37590935 gttcgaatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtctactacatctacaatgtatatg 37590836  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  37590835 acccgtgcggcagcacgggtggaaagtctagt 37590804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 11 - 233
Target Start/End: Complemental strand, 44376310 - 44376088
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  44376310 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 44376211  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  44376210 gttcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 44376111  T
Q  211 acccgtgcggtagcacaggtgga 233  Q
    |||||||||| ||||| ||||||    
T  44376110 acccgtgcggcagcacgggtgga 44376088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 52434622 - 52434854
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  52434622 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 52434721  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  52434722 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 52434821  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  52434822 acccgtgcggcagcacgggtggaaagtctagtt 52434854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 48118762 - 48118534
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||  |||||||| ||||    
T  48118762 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattggtaaaaattaatatttttaaggtgaatacgtgtggtgtttgag 48118663  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||   ||||||||||||||||||    
T  48118662 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgtct---acatctacaatgtatatg 48118566  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    || ||||||| ||||| |||||||||||||||    
T  48118565 actcgtgcggcagcacgggtggaaagtctagt 48118534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 30825153 - 30824922
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  30825153 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 30825054  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  30825053 gttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 30824954  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  30824953 acccgtgcggcagcacgggtggaaagtctagt 30824922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 11 - 246
Target Start/End: Complemental strand, 31966200 - 31965965
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  31966200 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 31966101  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| | | ||  | ||||||||||||||||    
T  31966100 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttatgtataataaatctacaatgtatatg 31966001  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtttat 246  Q
    |||||||||| ||||| |||||||||||||||||||    
T  31966000 acccgtgcggcagcacgggtggaaagtctagtttat 31965965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 41387124 - 41387356
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||| |||||||||||||    
T  41387124 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgatcgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 41387223  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  41387224 gttcgaatttcagcatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 41387323  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||| ||| ||||| | ||||||||||||||    
T  41387324 acccgtacggcagcacggatggaaagtctagtt 41387356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 53143493 - 53143260
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  53143493 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 53143394  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||  | ||||||||||||||||    
T  53143393 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 53143294  T
Q  211 acccgtgcggtagcacaggtggaaagtctagttt 244  Q
    |||||||||| ||||| |||| ||| ||||||||    
T  53143293 acccgtgcggcagcacgggtgaaaaatctagttt 53143260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 242 - 417
Target Start/End: Original strand, 21620337 - 21620515
Alignment:
Q  242 tttattattctttcccaaaaatattctttattaataccaccaatttgtattgaaatataaaaattgacatcaaatacatttatacacaaaagatgattta 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21620337 tttattattctttcccaaaaatattctttattaataccaccaatttgtattgaaatataaaaattgacatcaaatacatttatacacaaaagatgattta 21620436  T
Q  342 ---ataataatcatatacaaattatacatatatgaatcaacactatcatttttctaatatgcataaaaggtgtcaaaga 417  Q
       ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21620437 atgataattatcatatacaaattatacatatatgaatcaacactatcatttttctaatatgcataaaaggtgtcaaaga 21620515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 37651664 - 37651895
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||| ||||    
T  37651664 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgag 37651763  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||||||||||||||||||||||  |||||||||||| ||||||||| |||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  37651764 gttcgaattccaacatctgcatatatttgagaccacatatttcattctctttcatatgcattgagatttgtttttgtctactatatctacaatgtatatg 37651863  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  37651864 acccgtgcggcagcacgggtggaaagtctagt 37651895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 39058588 - 39058355
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||| ||||||    
T  39058588 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacatgattgataaaaattaatatttttaaggtgaataagtgtggtatctgag 39058489  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||||||||||||  |||||||| ||||||||||||| ||||||||||||||  ||| | |||| ||||| ||||| | ||||||||||||||||    
T  39058488 gttcgaattccaacatcttgatatatttgggaccacatatttcattctctttgatatatattaaaatttgtttttgtctactatatctacaatgtatatg 39058389  T
Q  211 acccgtgcggtagcacaggtggaaagtctagttt 244  Q
    |||||||||| |||||||||||||| ||||||||    
T  39058388 acccgtgcggcagcacaggtggaaaatctagttt 39058355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 12090691 - 12090459
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctga 109  Q
    |||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    |||||||  |||||||||||    
T  12090691 ccaataatataatattgacatataattttaacaaaagaaatgaagtaacacacgattgataaaaattaatattttttggttgaataagcgtggtgtctga 12090592  T
Q  110 ggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatat 209  Q
    ||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||    
T  12090591 ggttcgaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 12090492  T
Q  210 gacccgtgcggtagcacaggtggaaagtctagt 242  Q
    ||||||||||| ||||| |||||||||||||||    
T  12090491 gacccgtgcggcagcacgggtggaaagtctagt 12090459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 31628718 - 31628510
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| |||||||| ||||    
T  31628718 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtatgag 31628619  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||    
T  31628618 gttcgaattccaacatctgcatatatttgagaccacatatttaattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatatg 31628519  T
Q  211 acccgtgcg 219  Q
    |||||||||    
T  31628518 acccgtgcg 31628510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 47143031 - 47142799
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||| ||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||   |||||||||||    
T  47143031 ccaataatttaacattgagatataattttaacaaaagaatgaagtaacacacaatcgataaaaattaatatttttaaggtgaataagcatggtgtctgag 47142932  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||| |||||||||||||||||  |||||||||| | |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  47142931 gttcgaattctaacatctgcatatatttgagaccacatatgtcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 47142832  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    ||| |||||| ||||| ||||||||||||||||    
T  47142831 accagtgcggcagcacgggtggaaagtctagtt 47142799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 11 - 218
Target Start/End: Complemental strand, 52098422 - 52098214
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatt-aatatttttaaagtgaataaatgtggtgtctga 109  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  52098422 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatttaatatttttaaggtgaataagtgttgtgtctga 52098323  T
Q  110 ggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatat 209  Q
     ||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||| | || |||| |||||||    
T  52098322 agtttgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatttacagtgtatat 52098223  T
Q  210 gacccgtgc 218  Q
    |||||||||    
T  52098222 gacccgtgc 52098214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 45782660 - 45782480
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  45782660 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 45782561  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctac 191  Q
    |||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||  |||||||||||||||| |||||    
T  45782560 gttcaaattccaacatcttcatatatttaggaccacatatttcattctctttgatatatattgagatttatttttgtctac 45782480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 54624955 - 54625177
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||      |||||||||||||||||||||| |||||||| |||||||||||||    
T  54624955 ccaataatataacattgacatataattttaacaaa-gaatgaagtaaca------tgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 54625047  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| ||||| ||||| || ||||||||||||||     
T  54625048 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacgtctacaatgtatata 54625147  T
Q  211 acccgtgcggtagcacaggtggaaagtcta 240  Q
    |||||||||  | |||| ||||||| ||||    
T  54625148 acccgtgcgacatcacatgtggaaaatcta 54625177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 16 - 179
Target Start/End: Complemental strand, 50229933 - 50229769
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaa-ttaatatttttaaagtgaataaatgtggtgtctgaggttc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||| | |||||||||||||||    
T  50229933 aatataacattgacatataattttaacaaaagaatgaagtaacacactattgataaaaaattaatatttttaaggtgaataagtatggtgtctgaggttc 50229834  T
Q  115 gaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagattt 179  Q
    |||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||    
T  50229833 gaattccaacatctgcatatattttggaccacatgtttcattctctttgatatgcattgagattt 50229769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 50229766 - 50229712
Alignment:
Q  148 tattttattctctttgatatgcattgagatttatttttatctaccacatctacaa 202  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  50229766 tatttcattctctttgatatgcattgagatttttttttgtctactacatctacaa 50229712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 245
Target Start/End: Original strand, 18209699 - 18209743
Alignment:
Q  201 aatgtatatgacccgtgcggtagcacaggtggaaagtctagttta 245  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||    
T  18209699 aatgtatatgacccgtgcggcagcacgggtggaaagtctagttta 18209743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 12090773 - 12090730
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  12090773 aatataacattaacatataatttttacaaaagaatgaagtaaca 12090730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 16905261 - 16905218
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  16905261 aatataacattaacatataatttttacaaaagaatgaagtaaca 16905218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 16918201 - 16918158
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  16918201 aatataacattaacatataatttttacaaaagaatgaagtaaca 16918158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 30825235 - 30825192
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  30825235 aatataacattaacatataatttttacaaaagaatgaagtaaca 30825192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 31966282 - 31966239
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  31966282 aatataacattaacatataatttttacaaaagaatgaagtaaca 31966239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 39058665 - 39058622
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  39058665 aatataacattaacatataatttttacaaaagaatgaagtaaca 39058622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 45977307 - 45977264
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  45977307 aatataacattaacatataatttttacaaaagaatgaagtaaca 45977264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 47143113 - 47143070
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  47143113 aatataacattaacatataatttttacaaaagaatgaagtaaca 47143070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 48118845 - 48118802
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  48118845 aatataacattaacatataatttttacaaaagaatgaagtaaca 48118802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 52098503 - 52098460
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  52098503 aatataacattaacatataatttttacaaaagaatgaagtaaca 52098460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 52434540 - 52434583
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  52434540 aatataacattaacatataatttttacaaaagaatgaagtaaca 52434583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 53143577 - 53143534
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  53143577 aatataacattaacatataatttttacaaaagaatgaagtaaca 53143534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 54624879 - 54624922
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  54624879 aatataacattaacatataatttttacaaaagaatgaagtaaca 54624922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 34684649 - 34684603
Alignment:
Q  89 gtgaataaatgtggtgtctgaggttcgaattccaacatctgcatata 135  Q
    |||||||| || |||||||||||||||||||||||| ||||||||||    
T  34684649 gtgaataagtggggtgtctgaggttcgaattccaacctctgcatata 34684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 50230019 - 50229979
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagta 56  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  50230019 aatataacattaacatataatttttacaaaagaatgaagta 50229979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 41387042 - 41387085
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||    
T  41387042 aatataacattaacatataatttttacaaaataatgaagtaaca 41387085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 44376390 - 44376347
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||    
T  44376390 aatataacattaacatataatttttacaaaataatgaagtaaca 44376347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 45782734 - 45782697
Alignment:
Q  22 acattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  45782734 acattaacatataatttttacaaaagaatgaagtaaca 45782697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 186; Significance: 1e-100; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 11725188 - 11725421
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  11725188 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 11725287  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  11725288 gttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 11725387  T
Q  211 acccgtgcggtagcacaggtggaaagtctagttt 244  Q
    |||||||| | ||||| |||||||||||||||||    
T  11725388 acccgtgcagcagcacgggtggaaagtctagttt 11725421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 18568863 - 18569092
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||| ||||    
T  18568863 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtttgag 18568962  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||||||||||||||    
T  18568963 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatatg 18569062  T
Q  211 acccgtgcggtagcacaggtggaaagtcta 240  Q
    |||||||||||||||| |||||||||||||    
T  18569063 acccgtgcggtagcacgggtggaaagtcta 18569092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 28582859 - 28583085
Alignment:
Q  17 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcga 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  28582859 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 28582958  T
Q  117 attccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgt 216  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  28582959 attccaacatctgcatatatttgagaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatgacccgt 28583058  T
Q  217 gcggtagcacaggtggaaagtctagtt 243  Q
    |||| ||||| |||||||| |||||||    
T  28583059 gcggcagcacgggtggaaaatctagtt 28583085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 18841902 - 18842133
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||| |||||||||||||    
T  18841902 ccaataatataacattgacatataattttaacaaaagaatgaagtaacatacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 18842001  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
     ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  18842002 attcgaattccaacatctgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatg 18842101  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| || || |||||||||||||||    
T  18842102 acccgtgcggcagaacgggtggaaagtctagt 18842133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 44836907 - 44837138
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||||||||    
T  44836907 ccaataatttaacattgagatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgag 44837006  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||     
T  44837007 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgtattgagatttatttttgtctactacatctacaatgtatata 44837106  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| ||||||||| |||||    
T  44837107 acccgtgcggcagcacgggtggaaaggctagt 44837138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 10477935 - 10478173
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  10477935 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 10478034  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  10478035 gttcgaattccaacatctgcatatatttgtgaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 10478134  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtttattat 249  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  10478135 acccgtgcggcagcacgggtggaaagtctagtttattat 10478173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 30474115 - 30473883
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  30474115 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 30474016  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  30474015 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 30473916  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  30473915 acccgtgcggcagcacgggtggaaagtctagtt 30473883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 15961130 - 15961361
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  15961130 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 15961229  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  15961230 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 15961329  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  15961330 acccgtgcggcagcacgggtggaaagtctagt 15961361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 24408874 - 24409105
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||     
T  24408874 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgat 24408973  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  24408974 gttcgaattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattaagatttgtttttatctactacatctacaatgtatatg 24409073  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| | ||| ||| |||||||||||    
T  24409074 acccgtgcggcaacacgggtagaaagtctagt 24409105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 39257441 - 39257648
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  39257441 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 39257540  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  39257541 gttcaaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 39257640  T
Q  211 acccgtgc 218  Q
    ||||||||    
T  39257641 acccgtgc 39257648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 18997698 - 18997931
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  18997698 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 18997797  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  18997798 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 18997897  T
Q  211 acccgtgcggtagcacaggtggaaagtctagttt 244  Q
    |||||||||| ||||| |||||| ||||||||||    
T  18997898 acccgtgcggcagcacgggtggatagtctagttt 18997931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 21 - 242
Target Start/End: Complemental strand, 35122543 - 35122322
Alignment:
Q  21 aacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattc 120  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||    
T  35122543 aacattgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgagattcgaattc 35122444  T
Q  121 caacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcgg 220  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||     
T  35122443 caacatctgcatatattttggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcga 35122344  T
Q  221 tagcacaggtggaaagtctagt 242  Q
     ||||  |||||||||||||||    
T  35122343 cagcaggggtggaaagtctagt 35122322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 18175379 - 18175611
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||   |||||||| |||||||||||||    
T  18175379 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgtttgataataattaatatttttttggtgaataagtgtggtgtctgag 18175478  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  18175479 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 18175578  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  18175579 acccgtgcggcagcacgggtggaaagtctagtt 18175611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 32111092 - 32110860
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  32111092 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 32110993  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  32110992 gttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 32110893  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  32110892 acccgtgcggcagcacgggtggaaagtctagtt 32110860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 11 - 219
Target Start/End: Original strand, 40026798 - 40027006
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  40026798 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 40026897  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||| ||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  40026898 gttcaaattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 40026997  T
Q  211 acccgtgcg 219  Q
    |||||||||    
T  40026998 acccgtgcg 40027006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 44832417 - 44832185
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  44832417 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 44832318  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  44832317 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 44832218  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| | ||| ||||||||||||||||    
T  44832217 acccgtgcggcaacacgggtggaaagtctagtt 44832185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 6299251 - 6299020
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  6299251 ccaataatataatattgacatataattttaacaaaggaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 6299152  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  6299151 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 6299052  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  6299051 acccgtgcggcagcacgggtggaaagtctagt 6299020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 11 - 245
Target Start/End: Complemental strand, 996046 - 995812
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   ||||||||  ||||||||||||    
T  996046 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttttggtgaataagcgtggtgtctgag 995947  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  995946 gttcgaattccaacatatgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 995847  T
Q  211 acccgtgcggtagcacaggtggaaagtctagttta 245  Q
    |||||||||| ||||| ||||||||||||||||||    
T  995846 acccgtgcggcagcacgggtggaaagtctagttta 995812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 28274445 - 28274237
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  28274445 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgag 28274346  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||| | ||||||||||||||||||    
T  28274345 gttcgaattccaacatctgcgtatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctacaatgtatatg 28274246  T
Q  211 acccgtgcg 219  Q
    | |||||||    
T  28274245 atccgtgcg 28274237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 11 - 237
Target Start/End: Original strand, 11142459 - 11142691
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataa------aaattaatatttttaaagtgaataaatgtggtg 104  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||| |||||||| |||||||    
T  11142459 ccaataatataacactgacatataattttaacaaaagaatgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtg 11142558  T
Q  105 tctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatg 204  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||    
T  11142559 tctgaggttcgaattccaacatctgcatatatttgggagcacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatg 11142658  T
Q  205 tatatgacccgtgcggtagcacaggtggaaagt 237  Q
    ||||||| |||||||| ||||| ||||||||||    
T  11142659 tatatgatccgtgcggcagcacgggtggaaagt 11142691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 19412829 - 19413022
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaa-gaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctga 109  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  19412829 ccaataatataacattgacatataattttaacaaaaagaatgaagtaacacacgatggataaaaattaatatttttaaggtgaataactgtggtgtctga 19412928  T
Q  110 ggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaat 203  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  19412929 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 19413022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 11 - 191
Target Start/End: Original strand, 19240661 - 19240841
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||    
T  19240661 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgag 19240760  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctac 191  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  19240761 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctac 19240841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 11 - 191
Target Start/End: Original strand, 19313845 - 19314025
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||    
T  19313845 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgag 19313944  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctac 191  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  19313945 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctac 19314025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 16 - 210
Target Start/End: Complemental strand, 18210850 - 18210656
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcg 115  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||     
T  18210850 aatataacattgacatataactttaacaaaagaaggaaataacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 18210751  T
Q  116 aattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||    
T  18210750 aattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatctacaatgtatatg 18210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 48 - 243
Target Start/End: Original strand, 39997726 - 39997921
Alignment:
Q  48 aatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccaca 147  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  39997726 aatgaagtaacacacgattgataaaaattaatattttaaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttggaaccaca 39997825  T
Q  148 tattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 243  Q
    ||||| |||||||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||    
T  39997826 tatttcattctctttgatatacattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaattctagtt 39997921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 11 - 179
Target Start/End: Complemental strand, 24004958 - 24004790
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  24004958 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 24004859  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagattt 179  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  24004858 gttcgaatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagattt 24004790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 23353808 - 23353688
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| || ||||||||||    
T  23353808 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaaggtgaataagtggggtgtctgag 23353709  T
Q  111 gttcgaattccaacatctgca 131  Q
    |||||||||||||||||||||    
T  23353708 gttcgaattccaacatctgca 23353688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 25875530 - 25875322
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgt---------- 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||              
T  25875530 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgttttattctct 25875431  T
Q  101 ----ggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacat 196  Q
          |||||||||||||||||||| ||||||||||      ||| ||||| ||||||||||||| |||||||||||||||| ||||| ||||| | ||    
T  25875430 ttaatatgtctgaggttcgaattccagcatctgcata-----gggagcacatgttttattctctttaatatgcattgagatttgtttttgtctactatat 25875336  T
Q  197 ctacaatgtatatg 210  Q
    |||| |||||||||    
T  25875335 ctacgatgtatatg 25875322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 18481991 - 18481929
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaa 73  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18481991 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaa 18481929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 23353677 - 23353622
Alignment:
Q  187 tctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    ||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  23353677 tctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 23353622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 39997660 - 39997708
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||    
T  39997660 ccaataatataacattgacatataatttttacaaaagaatgaagtaaca 39997708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 19241006 - 19241055
Alignment:
Q  193 acatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  19241006 acatctacaatgtatatgacccgtgcggcagcgcgggtggaaagtctagt 19241055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 19314190 - 19314239
Alignment:
Q  193 acatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  19314190 acatctacaatgtatatgacccgtgcggcagcgcgggtggaaagtctagt 19314239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 6299333 - 6299290
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  6299333 aatataacattaacatataatttttacaaaagaatgaagtaaca 6299290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 10477853 - 10477896
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  10477853 aatataacattaacatataatttttacaaaagaatgaagtaaca 10477896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 11142381 - 11142424
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  11142381 aatataacattaacatataatttttacaaaagaatgaagtaaca 11142424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 11725106 - 11725149
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  11725106 aatataacattaacatataatttttacaaaagaatgaagtaaca 11725149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 18175297 - 18175340
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  18175297 aatataacattaacatataatttttacaaaagaatgaagtaaca 18175340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 18997616 - 18997659
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  18997616 aatataacattaacatataatttttacaaaagaatgaagtaaca 18997659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 19240580 - 19240623
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  19240580 aatataacattaacatataatttttacaaaagaatgaagtaaca 19240623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 19313764 - 19313807
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  19313764 aatataacattaacatataatttttacaaaagaatgaagtaaca 19313807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 19412752 - 19412795
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  19412752 aatataacattaacatataatttttacaaaagaatgaagtaaca 19412795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 23353889 - 23353846
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  23353889 aatataacattaacatataatttttacaaaagaatgaagtaaca 23353846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 24408795 - 24408838
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  24408795 aatataacattaacatataatttttacaaaagaatgaagtaaca 24408838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 30474196 - 30474153
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  30474196 aatataacattaacatataatttttacaaaagaatgaagtaaca 30474153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 32111174 - 32111131
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  32111174 aatataacattaacatataatttttacaaaagaatgaagtaaca 32111131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 35122628 - 35122585
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  35122628 aatataacattaacatataatttttacaaaagaatgaagtaaca 35122585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 39997580 - 39997623
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  39997580 aatataacattaacatataatttttacaaaagaatgaagtaaca 39997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 44832500 - 44832457
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  44832500 aatataacattaacatataatttttacaaaagaatgaagtaaca 44832457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 44836824 - 44836867
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  44836824 aatataacattaacatataatttttacaaaagaatgaagtaaca 44836867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 18210935 - 18210893
Alignment:
Q  17 atataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    |||||||||| |||||||||||| |||||||||||||||||||    
T  18210935 atataacattaacatataatttttacaaaagaatgaagtaaca 18210893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 996128 - 996085
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    |||| |||||| |||||||||||| |||||||||||||||||||    
T  996128 aatacaacattaacatataatttttacaaaagaatgaagtaaca 996085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 18841829 - 18841872
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| || ||||||||| |||||||||||||||||||    
T  18841829 aatataacattaacgtataatttttacaaaagaatgaagtaaca 18841872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 25875610 - 25875567
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||    
T  25875610 aatataacattaacatataatttttacaaaataatgaagtaaca 25875567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 28582777 - 28582820
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| ||||| |||||| |||||||||||||||||||    
T  28582777 aatataacattaacatacaatttttacaaaagaatgaagtaaca 28582820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 39257362 - 39257401
Alignment:
Q  20 taacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  39257362 taacattaacatataatttttacaaaagaatgaagtaaca 39257401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 40169757 - 40169720
Alignment:
Q  205 tatatgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  40169757 tatatgacccgtgcggtagcacgggtggaaagactagt 40169720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 4476921 - 4476885
Alignment:
Q  81 tttttaaagtgaataaatgtggtgtctgaggttcgaa 117  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  4476921 tttttaaagtgaataaatgaggtgtttgaggttcgaa 4476885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 186; Significance: 1e-100; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 8700259 - 8700492
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||    
T  8700259 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaaaaaatgtggtgtatgag 8700358  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||| ||||| ||||| ||||||||||||||||||    
T  8700359 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatatg 8700458  T
Q  211 acccgtgcggtagcacaggtggaaagtctagttt 244  Q
    |||||||||| ||||| |||||||||||||||||    
T  8700459 acccgtgcggcagcacgggtggaaagtctagttt 8700492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 19596594 - 19596362
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||||||||    
T  19596594 ccaataatttaacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgag 19596495  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  19596494 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatatg 19596395  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  19596394 acccgtgcggcagcacgggtggaaagtctagtt 19596362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 31424007 - 31424236
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||| ||||    
T  31424007 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtatgag 31424106  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  31424107 gttcgaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 31424206  T
Q  211 acccgtgcggtagcacaggtggaaagtcta 240  Q
    || ||||||| ||||| |||||||||||||    
T  31424207 actcgtgcggcagcacgggtggaaagtcta 31424236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 41664508 - 41664739
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  41664508 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 41664607  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  41664608 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 41664707  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  41664708 acccgtgcggcagcacgggtggaaagtctagt 41664739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 6120550 - 6120782
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  6120550 ccaataatataatattgacatatagttttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 6120649  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  6120650 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 6120749  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  6120750 acccgtgcggcagcacgggtggaaagtctagtt 6120782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 18351549 - 18351781
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||| ||||    
T  18351549 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgag 18351648  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  18351649 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 18351748  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  18351749 acccgtgcggcagcacgggtggaaagtctagtt 18351781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 41663235 - 41663466
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  41663235 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 41663334  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  41663335 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 41663434  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||| ||||| ||||| |||||||||||||||    
T  41663435 acccatgcggcagcacgggtggaaagtctagt 41663466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 11 - 240
Target Start/End: Complemental strand, 26231490 - 26231261
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||    
T  26231490 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtctgag 26231391  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||||||||||||| ||||||||  |||||||||||| ||||||||||||||||||||| |||| ||||| ||||| |||||||||||||||||     
T  26231390 gttcgaattccaacatctgaatatatttgagaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatata 26231291  T
Q  211 acccgtgcggtagcacaggtggaaagtcta 240  Q
    ||| |||||||||||| |||| ||||||||    
T  26231290 acctgtgcggtagcacgggtgaaaagtcta 26231261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 42055197 - 42055428
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  42055197 ccaataatataacattgacata--atcttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 42055294  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||| ||| ||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  42055295 gttcgaattccaacatctgcatatatttgggatcacctatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 42055394  T
Q  211 acccgtgcg--gtagcacaggtggaaagtctagt 242  Q
    |||||||||  ||||||| |||||||||||||||    
T  42055395 acccgtgcggtgtagcacgggtggaaagtctagt 42055428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 44902080 - 44902310
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||   ||||||||  ||||||||||||    
T  44902080 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatta-tattttttttgtgaataagcgtggtgtctgag 44902178  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  44902179 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 44902278  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  44902279 acccgtgcggcagcacgggtggaaagtctagt 44902310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 16 - 245
Target Start/End: Original strand, 20544828 - 20545057
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcg 115  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||  ||||||| | |||||||    
T  20544828 aatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgttttaggttcg 20544927  T
Q  116 aattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccg 215  Q
    ||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  20544928 aattctaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctaccatatctacaatgtatatgacccg 20545027  T
Q  216 tgcggtagcacaggtggaaagtctagttta 245  Q
    ||||| ||||| ||||||||||||||||||    
T  20545028 tgcggcagcacgggtggaaagtctagttta 20545057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 11 - 211
Target Start/End: Complemental strand, 999462 - 999262
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  999462 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 999363  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  999362 gttcgaattccaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactacatctacaaagtatatg 999263  T
Q  211 a 211  Q
    |    
T  999262 a 999262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 36279685 - 36279455
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||    
T  36279685 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtatctgag 36279586  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
     ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||| |||| ||||| ||||| ||||||||||||||||||    
T  36279585 attcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgatatttgtttttgtctactacatctacaatgtatatg 36279486  T
Q  211 acccgtgcggta-gcacaggtggaaagtctagt 242  Q
    || |||||  || |||| |||||||||||||||    
T  36279485 actcgtgc--tacgcacgggtggaaagtctagt 36279455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 16 - 242
Target Start/End: Complemental strand, 34007935 - 34007714
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  34007935 aatataacattgacatataattttaacaaaagaatgaagtaacacacgatttataaaaattaatatttttaaggtggataagtgtggtgtctgaggttcg 34007836  T
Q  116 aattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccg 215  Q
    |||||||||||| |||||||||| |||| |||||||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||| |||| ||||     
T  34007835 aattccaacatcggcatatatttgggactacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatggatattaccc- 34007737  T
Q  216 tgcggtagcacaggtggaaagtctagt 242  Q
        ||||||| |||||||||||||||    
T  34007736 ----gtagcacgggtggaaagtctagt 34007714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 42441958 - 42442193
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||   ||||||||  ||||||||||||    
T  42441958 ccaataatataatattgacatataattttaacaaaagaatgaagtaacac--gattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 42442055  T
Q  111 gttcg------aattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatg 204  Q
    |||||      ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||    
T  42442056 gttcgaattcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatg 42442155  T
Q  205 tatatgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||||||||| | ||| |||||||||||||||    
T  42442156 tatatgacccgtgcggcaacacgggtggaaagtctagt 42442193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 11 - 201
Target Start/End: Original strand, 16214822 - 16215012
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||  |||    
T  16214822 ccaataatgtaacactgacatataattttaacaaaagaatgaagtaacacacgattaataaaaattaatatttttaaggtgaataagtgtggtgttagag 16214921  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctaca 201  Q
    ||||||||||| |||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||    
T  16214922 gttcgaattcctacatttgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctaca 16215012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 89 - 243
Target Start/End: Complemental strand, 27944949 - 27944795
Alignment:
Q  89 gtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatc 188  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  27944949 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtc 27944850  T
Q  189 taccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagtt 243  Q
    ||| | |||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  27944849 tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtt 27944795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 692368 - 692227
Alignment:
Q  76 taatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgag 175  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||    
T  692368 taatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccatatatttcattctctttgatatgcattgag 692269  T
Q  176 atttatttttatctaccacatctacaatgtatatgacccgtg 217  Q
    |||| ||||| ||||| |||| ||||||||||||||||||||    
T  692268 atttgtttttgtctactacatttacaatgtatatgacccgtg 692227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 19596677 - 19596634
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  19596677 aatataacattaacatataattttaacaaaagaatgaagtaaca 19596634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 6120467 - 6120510
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  6120467 aatataacattaacatataatttttacaaaagaatgaagtaaca 6120510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 16214741 - 16214784
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  16214741 aatataacattaacatataatttttacaaaagaatgaagtaaca 16214784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 18351467 - 18351510
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  18351467 aatataacattaacatataatttttacaaaagaatgaagtaaca 18351510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 26231570 - 26231527
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  26231570 aatataacattaacatataatttttacaaaagaatgaagtaaca 26231527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 31423924 - 31423967
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  31423924 aatataacattaacatataatttttacaaaagaatgaagtaaca 31423967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 34008023 - 34007980
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  34008023 aatataacattaacatataatttttacaaaagaatgaagtaaca 34007980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 41663152 - 41663195
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  41663152 aatataacattaacatataatttttacaaaagaatgaagtaaca 41663195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 42441876 - 42441919
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  42441876 aatataacattaacatataatttttacaaaagaatgaagtaaca 42441919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 999543 - 999500
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||    
T  999543 aatataacattaacatataatttttacaaaataatgaagtaaca 999500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 36279766 - 36279723
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||    
T  36279766 aatataacattaacatataatttttacaaaagaatgaaataaca 36279723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 41664426 - 41664469
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| | |||||||||||||||||    
T  41664426 aatataacattaacatataatttttataaaagaatgaagtaaca 41664469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 44901998 - 44902041
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||    
T  44901998 aatataacattaacatataatttttacaaaagaatgaattaaca 44902041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 25889083 - 25889039
Alignment:
Q  198 tacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||| |||||||||||||||||| |||||  ||||||||||||||    
T  25889083 tacattgtatatgacccgtgcggcagcacgagtggaaagtctagt 25889039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 9216029 - 9216261
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||| |||||||||||||    
T  9216029 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtaaataagtgtggtgtctgag 9216128  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||    
T  9216129 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactatatctacaatgtatatg 9216228  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  9216229 acccgtgcggcagcacgggtggaaagtctagtt 9216261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 11 - 245
Target Start/End: Complemental strand, 34888917 - 34888683
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  34888917 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34888818  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  34888817 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34888718  T
Q  211 acccgtgcggtagcacaggtggaaagtctagttta 245  Q
    |||||||||| ||||| ||||||||||||||||||    
T  34888717 acccgtgcggcagcacgggtggaaagtctagttta 34888683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 4266379 - 4266610
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  4266379 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 4266478  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  4266479 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 4266578  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  4266579 acccgtgcggcagcacgggtggaaagtctagt 4266610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 38913978 - 38913747
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  38913978 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38913879  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  38913878 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38913779  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  38913778 acccgtgcggcagcacgggtggaaagtctagt 38913747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 11 - 245
Target Start/End: Complemental strand, 23482938 - 23482704
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||| ||||    
T  23482938 ccaataatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgag 23482839  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| | ||| ||||| ||||||||||||||||||    
T  23482838 gttcgaattccaacatctgcatatatttgggaccacatatttcatgctctttgatatgcattgagatttgtatttgtctactacatctacaatgtatatg 23482739  T
Q  211 acccgtgcggtagcacaggtggaaagtctagttta 245  Q
    || ||||||| ||||| ||||||||||||||||||    
T  23482738 actcgtgcggcagcacgggtggaaagtctagttta 23482704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 11 - 237
Target Start/End: Original strand, 35614065 - 35614291
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||| |     
T  35614065 ccaataatatgacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtcttaa 35614164  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||| |||||||||||||    
T  35614165 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatttacaatgtatatg 35614264  T
Q  211 acccgtgcggtagcacaggtggaaagt 237  Q
    |||||||||||||||| ||||||||||    
T  35614265 acccgtgcggtagcacgggtggaaagt 35614291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 7333942 - 7334174
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||    
T  7333942 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttatggtgaataagtgtggtgtctgag 7334041  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| || |||||     
T  7334042 gtttgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctaccatctatata 7334141  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||| | ||||| |||| |||||||||||    
T  7334142 acccgtgcagcagcacgggtgaaaagtctagtt 7334174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 18706739 - 18706509
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||| ||||    
T  18706739 ccaataatataacgttgacatataattttaacaaaagaatgaagttacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgag 18706640  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||||||    
T  18706639 gttcgaattccaacatctgcatatattt-ggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatatg 18706541  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    || ||||||| ||||| |||||||||||||||    
T  18706540 actcgtgcggcagcacgggtggaaagtctagt 18706509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 38444629 - 38444860
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||| ||||||||||||     
T  38444629 ccaataatataacattgacatataattttatcaaaagaatgaagtaacacattattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaa 38444728  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  38444729 gttcgaatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 38444828  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||| ||||| | ||| |||||||||||||||    
T  38444829 acccatgcggcatcacgggtggaaagtctagt 38444860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 18855463 - 18855232
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| |||||||||||||    
T  18855463 ccaataatataacattgacatataattttaacaaaagaatgaagtaatacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 18855364  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||| |||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||   ||| |||||  |||||||||||||||||    
T  18855363 gttcgaatttcaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagattt-gatttgtctactgcatctacaatgtatatg 18855265  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  18855264 acccgtgcggcagcacgggtggaaagtctagtt 18855232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 2951597 - 2951366
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  2951597 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 2951498  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| | ||  | || |||||||||||||    
T  2951497 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttttttttgtttattatatttacaatgtatatg 2951398  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  2951397 acccgtgcggcagcacgggtggaaagtctagt 2951366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 30 - 242
Target Start/End: Original strand, 1231813 - 1232025
Alignment:
Q  30 atataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||||||||    
T  1231813 atataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctg 1231912  T
Q  130 catatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacagg 229  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | || ||||||||||||||||||||||| ||||| ||    
T  1231913 catatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatttacaatgtatatgacccgtgcggcagcacggg 1232012  T
Q  230 tggaaagtctagt 242  Q
    |||||||||||||    
T  1232013 tggaaagtctagt 1232025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 11 - 202
Target Start/End: Original strand, 39727978 - 39728169
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  39727978 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 39728077  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaa 202  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  39728078 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaa 39728169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 50151058 - 50151265
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  50151058 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 50151157  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  50151158 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 50151257  T
Q  211 acccgtgc 218  Q
    ||||||||    
T  50151258 acccgtgc 50151265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 16 - 242
Target Start/End: Complemental strand, 52687339 - 52687114
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcg 115  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||    
T  52687339 aatataacattgacatataattttaataaaaaaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgt-tgaggttcg 52687241  T
Q  116 aattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccg 215  Q
     |||||||||||||||||||||| ||||||||||||| ||||||||| ||| |||||||||||| ||||| | ||| |||||||||||||||||||||||    
T  52687240 gattccaacatctgcatatatttgggaccacatatttcattctctttcataggcattgagatttgtttttgtatactacatctacaatgtatatgacccg 52687141  T
Q  216 tgcggtagcacaggtggaaagtctagt 242  Q
    ||||  ||||| |||||||||||||||    
T  52687140 tgcgacagcacgggtggaaagtctagt 52687114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 35614819 - 35615005
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcg 115  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||    
T  35614819 aatatgacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttt-aaggtaaataagtgtggtgtctgaggttcg 35614917  T
Q  116 aattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaat 203  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||||||||||||| |||||| ||||| ||||| |||| ||||||    
T  35614918 aattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatttacaat 35615005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 19764771 - 19764593
Alignment:
Q  21 aacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattc 120  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  19764771 aacattgacatgtaattttaacaaaataatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattc 19764672  T
Q  121 caacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatcta 199  Q
     ||||| ||||||||||| ||||||||||||| ||||| ||| |||||||||||||||| ||||| | ||| |||||||    
T  19764671 aaacatttgcatatatttgggaccacatatttcattctttttaatatgcattgagatttgtttttgtatactacatcta 19764593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 89 - 242
Target Start/End: Complemental strand, 31018353 - 31018200
Alignment:
Q  89 gtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatc 188  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  31018353 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtc 31018254  T
Q  189 taccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    ||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  31018253 tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 31018200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 89 - 240
Target Start/End: Original strand, 50326077 - 50326228
Alignment:
Q  89 gtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatc 188  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  50326077 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtc 50326176  T
Q  189 taccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtcta 240  Q
    ||| | |||||||||||||||||||||||||| ||||| |||||||||||||    
T  50326177 tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtcta 50326228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 2590333 - 2590468
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  2590333 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 2590432  T
Q  111 gttcgaattccaacatctgcatatatttaggaccaca 147  Q
    ||| |||||| ||||||||||||||||| | ||||||    
T  2590433 gtt-gaattcgaacatctgcatatatttggaaccaca 2590468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 19768462 - 19768602
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| |||||||||||||    
T  19768462 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtctgag 19768561  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatatt 151  Q
    ||||||| | |||||||| ||| ||||| | ||||||||||    
T  19768562 gttcgaaattcaacatctacatgtatttggaaccacatatt 19768602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 148 - 242
Target Start/End: Original strand, 29942153 - 29942247
Alignment:
Q  148 tattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  29942153 tatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 29942247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 5061335 - 5061419
Alignment:
Q  125 atctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatat 209  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  5061335 atctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 5061419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 52957056 - 52957105
Alignment:
Q  193 acatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  52957056 acatctacaatgtatatgacccgtgcggcagcacgggtggagagtctagt 52957105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 1231725 - 1231768
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  1231725 aatataacattaacatataatttttacaaaagaatgaagtaaca 1231768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 2951679 - 2951636
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  2951679 aatataacattaacatataatttttacaaaagaatgaagtaaca 2951636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 4266297 - 4266340
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  4266297 aatataacattaacatataatttttacaaaagaatgaagtaaca 4266340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 18706816 - 18706773
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  18706816 aatataacattaacatataatttttacaaaagaatgaagtaaca 18706773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 19764857 - 19764814
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  19764857 aatataacattaacatataatttttacaaaagaatgaagtaaca 19764814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 19768382 - 19768425
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  19768382 aatataacattaacatataatttttacaaaagaatgaagtaaca 19768425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 23483015 - 23482972
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  23483015 aatataacattaacatataatttttacaaaagaatgaagtaaca 23482972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 35614734 - 35614777
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  35614734 aatataacattaacatataatttttacaaaagaatgaagtaaca 35614777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 38914060 - 38914017
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  38914060 aatataacattaacatataatttttacaaaagaatgaagtaaca 38914017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 52036353 - 52036310
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  52036353 aatataacattaacatataatttttacaaaagaatgaagtaaca 52036310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 245
Target Start/End: Original strand, 2590466 - 2590512
Alignment:
Q  199 acaatgtatatgacccgtgcggtagcacaggtggaaagtctagttta 245  Q
    |||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  2590466 acaatgtatatgactcgtgcggcagcacgggtggaaagtctagttta 2590512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 7333863 - 7333903
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagta 56  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  7333863 aatataacattaacatataatttttacaaaagaatgaagta 7333903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 35613984 - 35614027
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35613984 aatataaaattaacatataatttttacaaaagaatgaagtaaca 35614027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 38444549 - 38444592
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||    
T  38444549 aatataacattaacatataatttttacaaaagaatgaattaaca 38444592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 52687424 - 52687381
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||    
T  52687424 aatataacattaacatataatttttacaaaagaatgaagcaaca 52687381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 184; Significance: 2e-99; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 20655280 - 20655049
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||| |||||||||||||    
T  20655280 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 20655181  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  20655180 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 20655081  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  20655080 acccgtgcggcagcacgggtggaaagtctagt 20655049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 5479194 - 5479426
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||    
T  5479194 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgag 5479293  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||| ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  5479294 gttcgaattccaacatctacatatatttgggatcacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatg 5479393  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||  | |||||||| |||||||||||    
T  5479394 acccgtgcgacaacacaggtgaaaagtctagtt 5479426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 33375760 - 33375993
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  33375760 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 33375859  T
Q  111 gttcgaattccaacatctgcatatatttagg--accacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtata 208  Q
    |||||||||||||||||||||||||||| ||  ||||||| |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  33375860 gttcgaattccaacatctgcatatatttgggacaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtata 33375959  T
Q  209 tgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||||| ||||| |||||||||| ||||    
T  33375960 tgacccgtgcggcagcacgggtggaaagtttagt 33375993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 38247096 - 38246863
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  38247096 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38246997  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  38246996 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38246897  T
Q  211 acccgtgcggtagcacaggtggaaagtctagttt 244  Q
    |||||||||| ||||| |||||||||||||||||    
T  38246896 acccgtgcggcagcacgggtggaaagtctagttt 38246863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 34107569 - 34107337
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  34107569 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34107470  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  34107469 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34107370  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  34107369 acccgtgcggcagcacgggtggaaagtctagtt 34107337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 20874686 - 20874917
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  20874686 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 20874785  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  20874786 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 20874885  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  20874886 acccgtgcggcagcacgggtggaaagtctagt 20874917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 11 - 242
Target Start/End: Original strand, 34110650 - 34110881
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  34110650 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34110749  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  34110750 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34110849  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  34110850 acccgtgcggcagcacgggtggaaagtctagt 34110881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 11 - 249
Target Start/End: Original strand, 1395987 - 1396225
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||    
T  1395987 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgactgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 1396086  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||| | |||||| |||||||||||    
T  1396087 gttcgaattccaacatctgcagatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctgcaatgtatatg 1396186  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtttattat 249  Q
    |||||||||| ||||| |||||||| | |||||| ||||    
T  1396187 acccgtgcggcagcacgggtggaaaatatagttttttat 1396225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 11 - 244
Target Start/End: Complemental strand, 16526537 - 16526304
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  16526537 ccaataatataatattgacatataattttaacaaaagaacgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 16526438  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  16526437 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 16526338  T
Q  211 acccgtgcggtagcacaggtggaaagtctagttt 244  Q
    |||||||||| ||||| |||||||||||||||||    
T  16526337 acccgtgcggcagcacgggtggaaagtctagttt 16526304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 10729673 - 10729441
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   ||||||||  ||||||||||||    
T  10729673 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttttggtgaataagcgtggtgtctgag 10729574  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  10729573 gttcgaattccaacatctgcatatatttgggaccacatatttcattctcttggatatgcattgagatttgtttttgtctactatatctacaatgtatatg 10729474  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  10729473 acccgtgcggcagcacgggtggaaagtctagtt 10729441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 11 - 233
Target Start/End: Complemental strand, 25099467 - 25099245
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||| ||||||| |||||    
T  25099467 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgag 25099368  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||||||    
T  25099367 gttcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatatg 25099268  T
Q  211 acccgtgcggtagcacaggtgga 233  Q
    |||||||||| ||||| ||||||    
T  25099267 acccgtgcggcagcacgggtgga 25099245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 11 - 233
Target Start/End: Complemental strand, 25158557 - 25158335
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||| ||||||| |||||    
T  25158557 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgag 25158458  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||||||    
T  25158457 gttcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatatg 25158358  T
Q  211 acccgtgcggtagcacaggtgga 233  Q
    |||||||||| ||||| ||||||    
T  25158357 acccgtgcggcagcacgggtgga 25158335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 2399171 - 2398941
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||   ||||||||  ||||||||||||    
T  2399171 ccaataatataatattgacatataattttaacaaaagaatgaagtaacac--gattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 2399074  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  2399073 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 2398974  T
Q  211 acccgtgcggtagcacaggtggaaagtctagtt 243  Q
    |||||||||| ||||| ||||||||||||||||    
T  2398973 acccgtgcggcagcacgggtggaaagtctagtt 2398941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 17373395 - 17373161
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  17373395 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 17373296  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatg---tat 207  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||   |||    
T  17373295 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtactat 17373196  T
Q  208 atgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    ||||||||||||| ||||| |||||||||||||||    
T  17373195 atgacccgtgcggcagcacgggtggaaagtctagt 17373161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 27647928 - 27648120
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  27647928 ccaacaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 27648027  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaat 203  Q
    ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  27648028 gttcgaattccaacatctgtatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 27648120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 11 - 220
Target Start/End: Complemental strand, 24223395 - 24223186
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||| | |||||||||||| |||||||| |||||||||||||    
T  24223395 ccaataatatcacattgacatatacttttaacaaaagaatgaagtaacacacgattggtaaagagtaatatttttaaggtgaataagtgtggtgtctgag 24223296  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| |||||||| |||||||||    
T  24223295 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttcatatgcattgagatttgtttttgtctactacatctacgatgtatatg 24223196  T
Q  211 acccgtgcgg 220  Q
    ||||||||||    
T  24223195 acccgtgcgg 24223186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 11 - 206
Target Start/End: Original strand, 29275622 - 29275817
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  29275622 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgag 29275721  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgta 206  Q
    |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||| |||| ||||| ||||  ||||||||||||||    
T  29275722 gttcgaattccaacatctgcatatatttgggaccacatgtttcattctctttgatatgcattgaaatttgtttttgtctattacatctacaatgta 29275817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 6940734 - 6940545
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||| |||||||| ||||    
T  6940734 ccaataatataacgttgacatataattttaacaaaagaatgaagtaacatacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgag 6940635  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctac 200  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  6940634 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctac 6940545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 11 - 207
Target Start/End: Complemental strand, 33570538 - 33570342
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  33570538 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 33570439  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtat 207  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||| ||||| ||||| | |||||||||||||    
T  33570438 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttggtatgcattgagatttgtttttgtctactatatctacaatgtat 33570342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 11 - 185
Target Start/End: Complemental strand, 1394717 - 1394543
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||| ||||    
T  1394717 ccaataatataacattgacatataaatttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaacaagtgtggtgtttgag 1394618  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttattttt 185  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||    
T  1394617 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgttttt 1394543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 14141338 - 14141158
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  14141338 ccaataatataatattggcatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 14141239  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctac 191  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  14141238 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctac 14141158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 17913744 - 17913911
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgaggttcg 115  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||| | |||||||||    
T  17913744 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaagattaatatttttaaggtgaataagtgtggtatttgaggttcg 17913843  T
Q  116 aattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttattt 183  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  17913844 aattccaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttattt 17913911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 99 - 242
Target Start/End: Original strand, 40177127 - 40177270
Alignment:
Q  99 gtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatct 198  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||| ||||| | ||||    
T  40177127 gtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctcttttatatgcattgagatttgtttttgtctactatatct 40177226  T
Q  199 acaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||||||||||||||| ||||| |||||||||||||||    
T  40177227 acaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 40177270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 1395907 - 1395950
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  1395907 aatataacattaacatataatttttacaaaagaatgaagtaaca 1395950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 2399253 - 2399210
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  2399253 aatataacattaacatataatttttacaaaagaatgaagtaaca 2399210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 5479115 - 5479158
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  5479115 aatataacattaacatataatttttacaaaagaatgaagtaaca 5479158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 6940811 - 6940768
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  6940811 aatataacattaacatataatttttacaaaagaatgaagtaaca 6940768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 8179808 - 8179753
Alignment:
Q  187 tctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    ||||| ||||||||||| ||||||| |||||||| ||||| |||||||||||||||    
T  8179808 tctactacatctacaatatatatgatccgtgcggcagcacgggtggaaagtctagt 8179753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 10729755 - 10729712
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  10729755 aatataacattaacatataatttttacaaaagaatgaagtaaca 10729712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 14141420 - 14141377
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  14141420 aatataacattaacatataatttttacaaaagaatgaagtaaca 14141377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 16526620 - 16526577
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  16526620 aatataacattaacatataatttttacaaaagaatgaagtaaca 16526577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 17373477 - 17373434
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  17373477 aatataacattaacatataatttttacaaaagaatgaagtaaca 17373434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 20874604 - 20874647
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  20874604 aatataacattaacatataatttttacaaaagaatgaagtaaca 20874647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 24223477 - 24223434
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  24223477 aatataacattaacatataatttttacaaaagaatgaagtaaca 24223434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 27647845 - 27647888
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  27647845 aatataacattaacatataatttttacaaaagaatgaagtaaca 27647888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 33570621 - 33570578
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  33570621 aatataacattaacatataatttttacaaaagaatgaagtaaca 33570578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 34107651 - 34107608
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  34107651 aatataacattaacatataatttttacaaaagaatgaagtaaca 34107608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 34110566 - 34110609
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  34110566 aatataacattaacatataatttttacaaaagaatgaagtaaca 34110609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 38247178 - 38247135
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  38247178 aatataacattaacatataatttttacaaaagaatgaagtaaca 38247135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 40177033 - 40177076
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  40177033 aatataacattaacatataatttttacaaaagaatgaagtaaca 40177076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 1394793 - 1394750
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    |||||||||||  ||||||||||| |||||||||||||||||||    
T  1394793 aatataacattaccatataatttttacaaaagaatgaagtaaca 1394750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 25158637 - 25158594
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||    
T  25158637 aatataacattaacatataatttttacaaaataatgaagtaaca 25158594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 33375680 - 33375723
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||    
T  33375680 aatataacattaacatataatttttacaaaataatgaagtaaca 33375723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 244
Target Start/End: Original strand, 19391258 - 19391299
Alignment:
Q  203 tgtatatgacccgtgcggtagcacaggtggaaagtctagttt 244  Q
    |||||||||||||||||||||||| | || ||||||||||||    
T  19391258 tgtatatgacccgtgcggtagcacggatgaaaagtctagttt 19391299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 29275540 - 29275580
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagta 56  Q
    ||||||||||| ||||||| |||| ||||||||||||||||    
T  29275540 aatataacattaacatatattttttacaaaagaatgaagta 29275580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 175; Significance: 5e-94; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 11 - 245
Target Start/End: Original strand, 19345 - 19579
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  19345 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 19444  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| ||||| |||||||||||||||| |    
T  19445 gttcgaattccaacatctgcatatatttgggaccacatatttaattatctttaatatgcattgagatttgtttttgtctactacatctacaatgtatagg 19544  T
Q  211 acccgtgcggtagcacaggtggaaagtctagttta 245  Q
    |||||| ||| ||||| ||||||||||||||||||    
T  19545 acccgtacggcagcacgggtggaaagtctagttta 19579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 174; Significance: 2e-93; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 11 - 244
Target Start/End: Original strand, 46272 - 46505
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||||    
T  46272 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 46371  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||    
T  46372 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 46471  T
Q  211 acccgtgcggtagcacaggtggaaagtctagttt 244  Q
    |||||||||| ||||| |||||||||||||||||    
T  46472 acccgtgcggcagcacgggtggaaagtctagttt 46505  T

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Target: scaffold0022 (Bit Score: 168; Significance: 7e-90; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 11 - 242
Target Start/End: Complemental strand, 149281 - 149050
Alignment:
Q  11 ccaagaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaagtgaataaatgtggtgtctgag 110  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||| |||     
T  149281 ccaataatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgttgtgtttgat 149182  T
Q  111 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatctaccacatctacaatgtatatg 210  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| ||||| | ||||||||| ||||||    
T  149181 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatttatatg 149082  T
Q  211 acccgtgcggtagcacaggtggaaagtctagt 242  Q
    |||||||||| ||||| |||||||||||||||    
T  149081 acccgtgcggcagcacgggtggaaagtctagt 149050  T

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Target: scaffold0022; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 149361 - 149318
Alignment:
Q  16 aatataacattgacatataattttaacaaaagaatgaagtaaca 59  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  149361 aatataacattaacatataatttttacaaaagaatgaagtaaca 149318  T

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Target: scaffold0515 (Bit Score: 116; Significance: 7e-59; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 71 - 242
Target Start/End: Complemental strand, 6232 - 6061
Alignment:
Q  71 aaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgca 170  Q
    |||||||||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  6232 aaaattaatatttttaagatgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgca 6133  T
Q  171 ttgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    ||||||| | ||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||| ||||||    
T  6132 ttgagatatgtttttgtctacaacatctacaatgtatatgacccgtgcggcagcacgggtggaaaatctagt 6061  T

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Target: scaffold0306 (Bit Score: 116; Significance: 7e-59; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 71 - 242
Target Start/End: Complemental strand, 6242 - 6071
Alignment:
Q  71 aaaattaatatttttaaagtgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgca 170  Q
    |||||||||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  6242 aaaattaatatttttaagatgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgca 6143  T
Q  171 ttgagatttatttttatctaccacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    ||||||| | ||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||| ||||||    
T  6142 ttgagatatgtttttgtctacaacatctacaatgtatatgacccgtgcggcagcacgggtggaaaatctagt 6071  T

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Target: scaffold0836 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 90 - 242
Target Start/End: Complemental strand, 5430 - 5278
Alignment:
Q  90 tgaataaatgtggtgtctgaggttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgcattgagatttatttttatct 189  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| |||    
T  5430 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 5331  T
Q  190 accacatctacaatgtatatgacccgtgcggtagcacaggtggaaagtctagt 242  Q
    |  | |||||||||||||||| ||||||||| ||||| |||||||||||||||    
T  5330 attatatctacaatgtatatgtcccgtgcggcagcacgggtggaaagtctagt 5278  T

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