View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1782_high_17 (Length: 217)
Name: NF1782_high_17
Description: NF1782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1782_high_17 |
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Alignment Details
Target: chr3 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 20 - 201
Target Start/End: Original strand, 34335578 - 34335759
Alignment:
| Q |
20 |
agatctatttattcatgaaacccaggttgaaccattaaccatatatgtgaatcaatctataacaatctaaggcctaggcaaagatgaaggtgatttaggg |
119 |
Q |
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| T |
34335578 |
agatctatttattcatgaaacccagtttgaatcattaaccatatatgtgaatcaatctataacaatctaaggcctaggcaaagatgaaggtgatttaggg |
34335677 |
T |
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| Q |
120 |
tgcaacttctttctaacaatagcacaagatctaccatcaattagtttaataaaatcgttaactctgaaggcacctttaatgt |
201 |
Q |
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| T |
34335678 |
tgcaacttctttctaacaatagcacaagatctaccatcaattagtttaataaaatcgttaactctgaaggcacctttaatgt |
34335759 |
T |
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