View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1782_low_15 (Length: 245)
Name: NF1782_low_15
Description: NF1782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1782_low_15 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 32 - 245
Target Start/End: Complemental strand, 35569972 - 35569752
Alignment:
| Q |
32 |
actatttggaaaattttgtttctttatgaaatataggatgtattcattgaa-------tgtttgcagaaagatatacatatagagtaaagttaaattgca |
124 |
Q |
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| T |
35569972 |
actatttggaaaattttgtttctttatgaaatataggatgtattcattgaactatttttgtttgcagaaagatatacatatagagtaaagttaaattgca |
35569873 |
T |
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| Q |
125 |
ctaattttgtgcattcaacgtttctaaaagaatcaatgaatgcaagtaatcaaagcggtcgaaggtccaatgaacaattctcgcacaagagacgctacaa |
224 |
Q |
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| T |
35569872 |
ctatttttgtgcattcaacgtttctaaaagaatcaatgaatgcatgtaatcaaagcggtcgaaggtccaatgaacaattctcgcacaagagacactacaa |
35569773 |
T |
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| Q |
225 |
ccgtagatggaagcattttag |
245 |
Q |
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||| ||||||||||||||||| |
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| T |
35569772 |
ccggagatggaagcattttag |
35569752 |
T |
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