View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17830_high_6 (Length: 257)
Name: NF17830_high_6
Description: NF17830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17830_high_6 |
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Alignment Details
Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 15 - 211
Target Start/End: Original strand, 40000262 - 40000458
Alignment:
| Q |
15 |
gttgtttgatgatatgtttttggcatttactgcagatgcaagcaccatagctgcaaactgcagacagcggggctcacagattaaaagactttggtcagtt |
114 |
Q |
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| T |
40000262 |
gttgtttgatgatatgtttttggcatttactgcagatgcaagcaccatagctgcaaactgcagacagcggggctcacagattaaaagactttggtcagtt |
40000361 |
T |
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| Q |
115 |
catgtgctgaacattaagttaaacaggttgggaaataatactctttccttcatctacacggacaagtgtgaatattcttcacccgctagttgcatgc |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
40000362 |
catgtgctgaacattaagttaaacaggttgggaaataatactctttccttcatctacacggacaagtgtgaatattcttcacctgctagttgcatgc |
40000458 |
T |
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