View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17830_low_3 (Length: 595)

Name: NF17830_low_3
Description: NF17830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17830_low_3
NF17830_low_3
[»] chr6 (50 HSPs)
chr6 (19-582)||(14720934-14721489)
chr6 (206-267)||(32511664-32511725)
chr6 (204-286)||(5732506-5732588)
chr6 (204-266)||(7265589-7265651)
chr6 (199-268)||(7377978-7378047)
chr6 (199-268)||(19040351-19040420)
chr6 (199-266)||(32298598-32298665)
chr6 (209-267)||(5462686-5462744)
chr6 (210-268)||(9658878-9658936)
chr6 (207-268)||(9629382-9629443)
chr6 (208-264)||(9617437-9617493)
chr6 (210-282)||(15443680-15443752)
chr6 (199-266)||(31579218-31579283)
chr6 (208-259)||(9025494-9025545)
chr6 (208-259)||(24115847-24115898)
chr6 (194-268)||(30851601-30851673)
chr6 (216-266)||(30866152-30866202)
chr6 (194-268)||(33001275-33001349)
chr6 (216-257)||(17411876-17411917)
chr6 (208-268)||(9027177-9027237)
chr6 (216-280)||(13851723-13851787)
chr6 (216-268)||(17341672-17341724)
chr6 (208-268)||(20371110-20371170)
chr6 (207-255)||(20518357-20518405)
chr6 (206-266)||(21424800-21424860)
chr6 (204-268)||(21924931-21924995)
chr6 (208-292)||(32320669-32320753)
chr6 (204-268)||(34172192-34172256)
chr6 (208-259)||(7151420-7151471)
chr6 (204-271)||(13360368-13360435)
chr6 (208-267)||(19147842-19147901)
chr6 (204-271)||(24614406-24614473)
chr6 (209-267)||(32839644-32839705)
chr6 (204-257)||(1700362-1700415)
chr6 (204-257)||(4864073-4864126)
chr6 (210-259)||(7086803-7086852)
chr6 (210-247)||(11424713-11424750)
chr6 (190-259)||(28715303-28715372)
chr6 (194-259)||(34595142-34595207)
chr6 (204-268)||(426510-426574)
chr6 (220-268)||(4040465-4040513)
chr6 (223-271)||(5970123-5970171)
chr6 (208-280)||(7723250-7723322)
chr6 (199-259)||(8776964-8777024)
chr6 (216-268)||(8931610-8931662)
chr6 (207-267)||(14155238-14155298)
chr6 (216-280)||(21885779-21885843)
chr6 (216-268)||(26562688-26562740)
chr6 (216-268)||(33340393-33340445)
chr6 (216-268)||(35125653-35125705)
[»] chr8 (37 HSPs)
chr8 (190-268)||(4786320-4786398)
chr8 (210-267)||(11803259-11803316)
chr8 (204-271)||(34897081-34897148)
chr8 (208-268)||(11927086-11927146)
chr8 (204-268)||(13844592-13844656)
chr8 (216-268)||(27213546-27213598)
chr8 (204-268)||(31236573-31236637)
chr8 (208-271)||(14634141-14634204)
chr8 (208-271)||(36934666-36934729)
chr8 (216-266)||(8798839-8798889)
chr8 (202-268)||(31109512-31109578)
chr8 (199-261)||(33405375-33405437)
chr8 (194-259)||(3025559-3025624)
chr8 (214-271)||(9936810-9936867)
chr8 (209-266)||(33382020-33382077)
chr8 (208-268)||(11944664-11944724)
chr8 (204-268)||(12606825-12606889)
chr8 (205-281)||(22595980-22596056)
chr8 (216-268)||(24362210-24362262)
chr8 (218-270)||(29776033-29776085)
chr8 (205-261)||(31580124-31580180)
chr8 (204-259)||(12985400-12985455)
chr8 (204-259)||(38278171-38278226)
chr8 (217-268)||(39954288-39954339)
chr8 (218-268)||(4611533-4611583)
chr8 (209-259)||(14134707-14134757)
chr8 (210-267)||(12570736-12570793)
chr8 (225-258)||(16869732-16869765)
chr8 (209-270)||(20679396-20679457)
chr8 (208-249)||(26902175-26902216)
chr8 (204-257)||(38079009-38079062)
chr8 (211-259)||(3508060-3508108)
chr8 (208-268)||(22651975-22652035)
chr8 (203-267)||(24669433-24669497)
chr8 (220-260)||(37380949-37380989)
chr8 (194-258)||(40332200-40332264)
chr8 (232-280)||(41838147-41838195)
[»] chr4 (33 HSPs)
chr4 (217-286)||(22440609-22440678)
chr4 (199-268)||(8423709-8423778)
chr4 (194-258)||(9996849-9996913)
chr4 (218-265)||(903924-903971)
chr4 (209-268)||(5775359-5775418)
chr4 (232-299)||(34515898-34515965)
chr4 (194-268)||(23292972-23293046)
chr4 (204-294)||(33950109-33950199)
chr4 (190-280)||(40179618-40179708)
chr4 (210-259)||(36635332-36635381)
chr4 (190-271)||(48139260-48139341)
chr4 (218-259)||(49652982-49653023)
chr4 (194-259)||(54580009-54580074)
chr4 (203-280)||(55940998-55941075)
chr4 (207-259)||(15029773-15029825)
chr4 (209-257)||(18576038-18576086)
chr4 (216-268)||(40613449-40613501)
chr4 (208-259)||(15659760-15659811)
chr4 (194-249)||(19097880-19097935)
chr4 (209-259)||(847959-848009)
chr4 (204-266)||(16189710-16189772)
chr4 (216-257)||(13134460-13134501)
chr4 (199-268)||(21945502-21945571)
chr4 (216-269)||(26504307-26504360)
chr4 (216-268)||(35723392-35723445)
chr4 (202-259)||(36386205-36386262)
chr4 (208-249)||(44132644-44132685)
chr4 (210-267)||(56110806-56110863)
chr4 (208-267)||(3712508-3712568)
chr4 (232-280)||(11651158-11651206)
chr4 (220-268)||(21539879-21539927)
chr4 (202-245)||(42014980-42015024)
chr4 (208-268)||(43368078-43368138)
[»] chr7 (47 HSPs)
chr7 (194-270)||(32287449-32287525)
chr7 (208-260)||(35297672-35297724)
chr7 (209-268)||(19206049-19206108)
chr7 (199-268)||(22484024-22484093)
chr7 (204-268)||(20549790-20549854)
chr7 (204-280)||(26733291-26733367)
chr7 (204-259)||(3721101-3721156)
chr7 (204-259)||(24146824-24146879)
chr7 (194-280)||(5835234-5835320)
chr7 (210-259)||(23849460-23849509)
chr7 (208-268)||(22602710-22602770)
chr7 (212-267)||(8160416-8160471)
chr7 (204-315)||(25481854-25481965)
chr7 (216-267)||(27732247-27732298)
chr7 (216-287)||(32308100-32308171)
chr7 (210-268)||(27093415-27093473)
chr7 (210-268)||(27184828-27184886)
chr7 (216-269)||(17851429-17851482)
chr7 (216-270)||(49088807-49088863)
chr7 (194-294)||(598181-598281)
chr7 (208-268)||(1433453-1433513)
chr7 (205-257)||(9482944-9482996)
chr7 (208-256)||(17307904-17307952)
chr7 (204-260)||(38143230-38143286)
chr7 (210-261)||(5233635-5233686)
chr7 (216-259)||(12278843-12278886)
chr7 (204-259)||(21826281-21826336)
chr7 (210-268)||(29787373-29787429)
chr7 (218-280)||(23191883-23191945)
chr7 (210-268)||(33384584-33384642)
chr7 (219-268)||(10377506-10377555)
chr7 (222-267)||(11700803-11700848)
chr7 (194-259)||(15680817-15680882)
chr7 (204-249)||(18213029-18213074)
chr7 (232-269)||(36297369-36297406)
chr7 (204-249)||(39138462-39138507)
chr7 (222-259)||(40656996-40657033)
chr7 (211-267)||(3520345-3520401)
chr7 (220-280)||(5235973-5236033)
chr7 (216-268)||(5548675-5548727)
chr7 (216-260)||(8239058-8239102)
chr7 (216-268)||(21828413-21828465)
chr7 (199-259)||(21880160-21880220)
chr7 (216-268)||(22868041-22868093)
chr7 (216-268)||(26329390-26329442)
chr7 (204-268)||(28155569-28155633)
chr7 (216-280)||(42720898-42720962)
[»] chr3 (37 HSPs)
chr3 (208-268)||(7614415-7614475)
chr3 (204-268)||(7928449-7928513)
chr3 (208-268)||(16192750-16192810)
chr3 (194-249)||(35222956-35223011)
chr3 (199-269)||(40993326-40993397)
chr3 (204-268)||(8383256-8383320)
chr3 (208-264)||(21419455-21419511)
chr3 (204-268)||(25093501-25093565)
chr3 (216-268)||(32804548-32804600)
chr3 (199-259)||(45451561-45451621)
chr3 (204-266)||(4201397-4201459)
chr3 (199-257)||(8789541-8789599)
chr3 (208-261)||(16789018-16789071)
chr3 (208-268)||(11313800-11313860)
chr3 (204-264)||(49505150-49505210)
chr3 (204-255)||(6780415-6780466)
chr3 (208-259)||(25948887-25948938)
chr3 (208-259)||(28678311-28678362)
chr3 (207-270)||(38731215-38731278)
chr3 (218-268)||(1438803-1438853)
chr3 (206-268)||(4466598-4466660)
chr3 (208-266)||(8039835-8039893)
chr3 (209-255)||(13807181-13807227)
chr3 (202-247)||(8593157-8593202)
chr3 (204-249)||(13414487-13414532)
chr3 (221-266)||(14840304-14840349)
chr3 (216-260)||(2731819-2731863)
chr3 (219-259)||(9624649-9624689)
chr3 (219-271)||(11493372-11493424)
chr3 (208-256)||(15314876-15314924)
chr3 (216-280)||(15544680-15544744)
chr3 (199-267)||(24633392-24633460)
chr3 (216-268)||(26290370-26290422)
chr3 (232-268)||(32429404-32429440)
chr3 (208-260)||(39756243-39756295)
chr3 (210-278)||(47775714-47775782)
chr3 (208-268)||(49651786-49651846)
[»] chr1 (50 HSPs)
chr1 (204-268)||(2784555-2784619)
chr1 (204-268)||(13436457-13436521)
chr1 (199-266)||(28674801-28674868)
chr1 (208-266)||(6427351-6427409)
chr1 (199-268)||(29163372-29163441)
chr1 (204-268)||(1864876-1864940)
chr1 (204-264)||(52903252-52903312)
chr1 (204-315)||(9709772-9709883)
chr1 (210-268)||(13997882-13997940)
chr1 (204-269)||(19637766-19637831)
chr1 (199-268)||(21530688-21530757)
chr1 (206-259)||(35999320-35999373)
chr1 (204-268)||(36878460-36878524)
chr1 (204-268)||(39953142-39953206)
chr1 (204-271)||(7988447-7988514)
chr1 (220-271)||(34257922-34257973)
chr1 (199-282)||(38078652-38078735)
chr1 (204-259)||(40181879-40181934)
chr1 (217-279)||(19324550-19324612)
chr1 (210-259)||(12713329-12713378)
chr1 (210-259)||(12717420-12717469)
chr1 (208-269)||(20157350-20157411)
chr1 (204-249)||(30749858-30749903)
chr1 (204-249)||(30771309-30771354)
chr1 (208-257)||(44482240-44482289)
chr1 (204-259)||(2288165-2288218)
chr1 (208-268)||(5376500-5376560)
chr1 (210-286)||(10572591-10572667)
chr1 (216-268)||(25098563-25098615)
chr1 (216-259)||(7918219-7918262)
chr1 (204-259)||(14332638-14332693)
chr1 (216-267)||(17425101-17425152)
chr1 (209-264)||(27471567-27471622)
chr1 (208-267)||(34371714-34371772)
chr1 (209-268)||(38503319-38503378)
chr1 (194-268)||(2896107-2896181)
chr1 (194-268)||(5898252-5898326)
chr1 (216-282)||(32724106-32724172)
chr1 (223-268)||(1262883-1262928)
chr1 (209-282)||(19562622-19562695)
chr1 (206-267)||(22781442-22781503)
chr1 (216-257)||(25361896-25361937)
chr1 (213-266)||(36905998-36906051)
chr1 (203-268)||(38075965-38076030)
chr1 (216-268)||(398773-398825)
chr1 (208-268)||(9828043-9828103)
chr1 (210-266)||(16252888-16252944)
chr1 (216-268)||(17831539-17831591)
chr1 (204-260)||(39130763-39130819)
chr1 (204-268)||(41877466-41877530)
[»] scaffold0110 (1 HSPs)
scaffold0110 (210-268)||(28849-28907)
[»] scaffold0022 (1 HSPs)
scaffold0022 (208-270)||(99890-99952)
[»] chr5 (32 HSPs)
chr5 (199-268)||(28588665-28588734)
chr5 (199-266)||(30502379-30502446)
chr5 (199-266)||(30542722-30542789)
chr5 (208-268)||(3966502-3966562)
chr5 (210-270)||(38749565-38749625)
chr5 (208-259)||(6471889-6471940)
chr5 (208-259)||(17925172-17925223)
chr5 (208-259)||(22423812-22423863)
chr5 (216-271)||(23287357-23287412)
chr5 (204-298)||(17123017-17123111)
chr5 (208-286)||(18592054-18592132)
chr5 (208-270)||(28296325-28296387)
chr5 (209-271)||(28862301-28862363)
chr5 (216-269)||(7175027-7175080)
chr5 (199-268)||(16203786-16203855)
chr5 (210-298)||(15410450-15410538)
chr5 (208-268)||(32766943-32767003)
chr5 (221-264)||(30098329-30098372)
chr5 (208-271)||(39205876-39205939)
chr5 (199-257)||(18421832-18421890)
chr5 (217-267)||(24273039-24273089)
chr5 (217-267)||(24389125-24389175)
chr5 (194-268)||(27932234-27932308)
chr5 (208-266)||(36838544-36838602)
chr5 (199-249)||(42029770-42029820)
chr5 (206-267)||(32630733-32630794)
chr5 (215-259)||(3751937-3751981)
chr5 (208-268)||(11685938-11685998)
chr5 (204-268)||(21191052-21191116)
chr5 (194-282)||(21576731-21576819)
chr5 (199-259)||(23012399-23012459)
chr5 (216-268)||(27144462-27144514)
[»] scaffold0697 (1 HSPs)
scaffold0697 (199-268)||(1643-1712)
[»] scaffold0050 (1 HSPs)
scaffold0050 (194-270)||(70275-70351)
[»] chr2 (28 HSPs)
chr2 (199-259)||(5367200-5367260)
chr2 (216-268)||(21616761-21616813)
chr2 (216-268)||(31808076-31808128)
chr2 (208-259)||(18622614-18622665)
chr2 (205-280)||(31026682-31026757)
chr2 (208-267)||(44860320-44860379)
chr2 (206-268)||(23718025-23718087)
chr2 (204-270)||(23921250-23921316)
chr2 (206-268)||(24105697-24105759)
chr2 (204-249)||(20242723-20242768)
chr2 (208-268)||(17077012-17077071)
chr2 (204-264)||(34691801-34691861)
chr2 (204-264)||(34714213-34714273)
chr2 (216-268)||(37411252-37411304)
chr2 (210-266)||(39279676-39279732)
chr2 (217-268)||(16069263-16069314)
chr2 (221-268)||(19573977-19574024)
chr2 (208-259)||(38442315-38442366)
chr2 (218-268)||(28677908-28677958)
chr2 (204-266)||(31018591-31018653)
chr2 (216-266)||(35449514-35449564)
chr2 (222-271)||(28412346-28412395)
chr2 (199-268)||(30404841-30404910)
chr2 (220-265)||(41942107-41942152)
chr2 (199-259)||(2438710-2438770)
chr2 (208-268)||(17087940-17087999)
chr2 (210-266)||(28121551-28121607)
chr2 (204-271)||(30298445-30298510)
[»] scaffold0122 (1 HSPs)
scaffold0122 (208-286)||(8647-8725)
[»] scaffold0722 (1 HSPs)
scaffold0722 (204-280)||(7028-7104)
[»] scaffold0320 (1 HSPs)
scaffold0320 (210-266)||(17038-17094)
[»] scaffold0020 (2 HSPs)
scaffold0020 (208-268)||(135312-135372)
scaffold0020 (208-258)||(137789-137839)
[»] scaffold0168 (1 HSPs)
scaffold0168 (216-267)||(21043-21094)
[»] scaffold0123 (1 HSPs)
scaffold0123 (216-267)||(44533-44584)
[»] scaffold0036 (1 HSPs)
scaffold0036 (208-259)||(9747-9798)
[»] scaffold0136 (1 HSPs)
scaffold0136 (223-268)||(3864-3909)
[»] scaffold0024 (1 HSPs)
scaffold0024 (216-265)||(68250-68299)
[»] scaffold0652 (1 HSPs)
scaffold0652 (204-280)||(458-534)


Alignment Details
Target: chr6 (Bit Score: 324; Significance: 0; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 19 - 582
Target Start/End: Complemental strand, 14721489 - 14720934
Alignment:
Q  19 aatttgaaccgaacaaacacatgaagaagatggaaaatgaatataatgtcgcattaagacgacaaacaaagcagtgtattgttctaaaacgacaaacaca 118  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  14721489 aatttgaaccgaacaaacacataaagaagatggaaaatgaatataatgtcgcatcaagacgaaaaacaaagcagtgtattgttctaaaacgacaaacaca 14721390  T
Q  119 cgaaaggaaaaccaaatatgtgtgaaattctatgaagaacggacacccctttaattatgcatgctctgttttcgaacacttgtcatgtccgacaccaaca 218  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| || ||||||||||||||||||||| | | |||||||||||||    
T  14721389 cgaaaggaaaaccaaatatgtgtgaaattctatgaagaagggacacccctttgattaggcgtgctctgttttcgaacacttgacgtatccgacaccaaca 14721290  T
Q  219 catataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttcatgttatgtctgatgttcatatctgcatccgtgatt 318  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||| |||||| ||           |||| |||||  || ||| || |||||||     
T  14721289 catataattatagtgaattatgtaattttcttaaattattaatggtgtcaacgaattag-----------tgtccgatgtcaatgtctaca-ccgtgatg 14721202  T
Q  319 agaaggtgaaaatcaattatgtagataaaagaggagnnnnnnncaatttagattc-gttggttttggatgttttaataatagtataagatgtctctccat 417  Q
    || |||||||||||||||| ||| ||||||||||||       ||||||||||||  ||||||||| ||||||||||||||||||||||||  ||| |||    
T  14721201 agtaggtgaaaatcaattaggtaaataaaagaggag-aaaaaacaatttagattcatttggttttgaatgttttaataatagtataagatg--tctgcat 14721105  T
Q  418 ttcaaattatgt-tttcaattgtacccaaataaa-----tacgtgtttcaattgaaaaaggaaacatgttatagtagttaaaagtaaagtcatgatttag 511  Q
    ||||||||| || |||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14721104 ttcaaattacgtgtttcaattgtacccaaataaataccgtacgtgtttcaattgaaaaaggaaacatgttatagtagttgaaagtaaagtcatgatttag 14721005  T
Q  512 gattattgaattgccgaacgaaaagtcatgacaaatattacaaatttaagtaaagttcaatgcttgttcat 582  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||| |||||    
T  14721004 gattattgaattgccgaacgaaaaataatgacaaatattacaaattcaagtaaagttcaatgctttttcat 14720934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 32511664 - 32511725
Alignment:
Q  206 tccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    |||||||||||||| |||||||| | |||||||||||||||||||||||||||| |||||||    
T  32511664 tccgacaccaacacttataattacactgaattatgtgattttcttaaattattagcggtgtc 32511725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 204 - 286
Target Start/End: Original strand, 5732506 - 5732588
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttcatgt 286  Q
    ||||||||||| ||||||||||||| | | || ||||||||||||| |||||||||||||||||| ||  ||||||| |||||    
T  5732506 tgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgt 5732588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 7265589 - 7265651
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    ||||||||||| ||||||||||||| | |||||||||||||||||| ||||||||| ||||||    
T  7265589 tgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgt 7265651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 7378047 - 7377978
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| ||||||||||| ||||||||||||| | |||||||||||||||||| ||||| ||| ||||||||    
T  7378047 tgtcgtgtccgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtcg 7377978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 19040420 - 19040351
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| ||||||||||  ||||||||||||| | |||||||||||||||||| ||||||||| ||||||||    
T  19040420 tgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcg 19040351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 32298598 - 32298665
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    ||||||||| |||||||||||||||||||| | | |||||||||||  ||||||||||||| ||||||    
T  32298598 tgtcatgtctgacaccaacacatataattacactaaattatgtgatgatcttaaattattagcggtgt 32298665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 5462744 - 5462686
Alignment:
Q  209 gacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    |||| ||||| ||||||||| | |||||||||||||||||| |||||||||||||||||    
T  5462744 gacatcaacatatataattacaatgaattatgtgattttctcaaattattaacggtgtc 5462686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 9658936 - 9658878
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||| ||| ||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcg 9658878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 207 - 268
Target Start/End: Complemental strand, 9629443 - 9629382
Alignment:
Q  207 ccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||||| ||||||||||||| | |||||||||||||||||| ||||||||  ||||||||    
T  9629443 ccgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcg 9629382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 9617493 - 9617437
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggt 264  Q
    ||||||| ||||||||||||| | |||||||||||||||||| ||||||||| ||||    
T  9617493 cgacaccgacacatataattacattgaattatgtgattttctcaaattattaccggt 9617437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 282
Target Start/End: Complemental strand, 15443752 - 15443680
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttc 282  Q
    ||||||||| ||||||||||| |||||||||| ||||||| |||||||||  | ||||||||  |||||||||    
T  15443752 acaccaacatatataattatattgaattatgttattttctcaaattattattgatgtcgacgtgtcagtgttc 15443680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 31579218 - 31579283
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    |||| ||||||||||| |||||||  |||| | |||||||||||||||||| ||||||||||||||||    
T  31579218 tgtcgtgtccgacaccgacacata--attacactgaattatgtgattttctcaaattattaacggtgt 31579283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 9025494 - 9025545
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||| ||||||||||||| | |||||||||||||||||| |||||||||    
T  9025494 cgacaccgacacatataattacactgaattatgtgattttctcaaattatta 9025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 24115847 - 24115898
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||||||| ||||||||||| |||||||||||||||| | |||||||||    
T  24115847 cgacaccaacatatataattatattgaattatgtgattttttgaaattatta 24115898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 30851673 - 30851601
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| |||| ||||||||||| ||||||||||||| | |||||  ||||||||||||||||||||| | ||||||    
T  30851673 acacgtgtcgtgtccgacaccgacacatataattacattgaat--tgtgattttcttaaattattagcagtgtcg 30851601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 30866152 - 30866202
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    ||||||||||||| | |||||||||||||||||| ||||||||| ||||||    
T  30866152 acacatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 33001275 - 33001349
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| |||| ||||||||||| ||||||||||||| | | |||||||||||||| | ||||||||| | ||||||    
T  33001275 acacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcg 33001349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 17411876 - 17411917
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattat 257  Q
    ||||||||||||||| |||||||| |||||||||||||||||    
T  17411876 acacatataattatactgaattatatgattttcttaaattat 17411917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 9027237 - 9027177
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||| ||||||||||||| |  ||||||||||||| ||| ||||||||| ||||||||    
T  9027237 cgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcg 9027177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 13851787 - 13851723
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgt 280  Q
    ||||||||||||| | ||||||| || ||||||| ||||||||| |||||||||||  |||||||    
T  13851787 acacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgt 13851723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 17341672 - 17341724
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| |||||||| | |||||||||||||||| | ||||||||||||||||||    
T  17341672 acacttataattacactgaattatgtgattttatcaaattattaacggtgtcg 17341724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 20371110 - 20371170
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||| ||||||||||| | | ||| |||||||||||||| ||||||||| ||||||||    
T  20371110 cgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcg 20371170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 20518405 - 20518357
Alignment:
Q  207 ccgacaccaacacatataattatagtgaattatgtgattttcttaaatt 255  Q
    |||||||||||||||||||||||| ||| |||||| ||||||| |||||    
T  20518405 ccgacaccaacacatataattatactgatttatgtaattttctcaaatt 20518357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 266
Target Start/End: Original strand, 21424800 - 21424860
Alignment:
Q  206 tccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    |||||||||| ||||||||| |||| ||| |||||||||||| | ||||||||| ||||||    
T  21424800 tccgacaccagcacatataaatatattgacttatgtgattttttcaaattattagcggtgt 21424860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 21924931 - 21924995
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||| ||||||||||||| | |||||||| |||| |||| ||||||||| | ||||||    
T  21924931 tgtccgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtcg 21924995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 292
Target Start/End: Original strand, 32320669 - 32320753
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttcatgttatgtc 292  Q
    ||||||| | ||||||||| | | |||||||||||||||| | |||||||||||||||||  || ||||||| || |||| ||||    
T  32320669 cgacaccgatacatataatgacattgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgctcgtgttgtgtc 32320753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 34172256 - 34172192
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||| |||||||||||| || | |||||||||||||||| ||||| |||  |||||||    
T  34172256 tgtccgacaccgacacatataattttaattaattatgtgattttctcaaattgttagaggtgtcg 34172192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 7151471 - 7151420
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||||||||||||||||| | | |||||||||||||| | |||||||||    
T  7151471 cgacaccaacacatataattacacttaattatgtgattttttcaaattatta 7151420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 13360368 - 13360435
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacg 271  Q
    |||| |||||| | ||||||||||| | |||||||||||||||||| |||||| ||  ||||||||||    
T  13360368 tgtctgacaccgaaacatataattacactgaattatgtgattttctcaaattactagtggtgtcgacg 13360435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 267
Target Start/End: Complemental strand, 19147901 - 19147842
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    ||||||| |||||||||||||   |||  ||| |||||||||||||||||||||||||||    
T  19147901 cgacaccgacacatataattactctgatctatatgattttcttaaattattaacggtgtc 19147842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 24614473 - 24614406
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacg 271  Q
    ||||||||||||||||||| ||||| | | |||||| | ||||| ||||||||||| |||| ||||||    
T  24614473 tgtccgacaccaacacatacaattacactaaattatataatttttttaaattattagcggtatcgacg 24614406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 32839644 - 32839705
Alignment:
Q  209 gacaccaacacatat---aattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    |||||||||||||||   ||||||| || ||||||||||||||| ||||||||||| |||||    
T  32839644 gacaccaacacatatgataattatactggattatgtgattttctcaaattattaacagtgtc 32839705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 1700415 - 1700362
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattat 257  Q
    ||||||||||| |||| |||||||| | |||| ||||||||||| |||||||||    
T  1700415 tgtccgacaccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 4864126 - 4864073
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattat 257  Q
    ||||||||||||||||||||||||| | | |||||||| ||||| | |||||||    
T  4864126 tgtccgacaccaacacatataattaaattaaattatgtcattttttcaaattat 4864073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 7086852 - 7086803
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||| ||||||||||||| | | |||||||||||||||| |||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattatta 7086803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 247
Target Start/End: Original strand, 11424713 - 11424750
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgatttt 247  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  11424713 acaccaacacatataattatattgaattatatgatttt 11424750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 28715372 - 28715303
Alignment:
Q  190 tcgaacacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||||||| |||| ||||||||||| |||| | |||||| | |||||||||| ||||| | |||||||||    
T  28715372 tcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattatta 28715303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 34595207 - 34595142
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||| |||| ||||||||||| |||| | |||||| | |||||||||||||||| | |||||||||    
T  34595207 acacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 34595142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 426510 - 426574
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||| |||| | |||||| | | |||||||||||||| | ||||||||||| ||||||    
T  426510 tgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcg 426574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 4040513 - 4040465
Alignment:
Q  220 atataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||| ||||| ||| ||||||||||||||||||  |||||||    
T  4040513 atataattatactgaataatgcgattttcttaaattattagtggtgtcg 4040465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 5970123 - 5970171
Alignment:
Q  223 taattatagtgaattatgtgattttcttaaattattaacggtgtcgacg 271  Q
    |||||| | |||||||||||||||| | ||||||||||| |||||||||    
T  5970123 taattacactgaattatgtgattttttcaaattattaactgtgtcgacg 5970171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 280
Target Start/End: Original strand, 7723250 - 7723322
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgt 280  Q
    ||||||| | ||||||||||||  |||||||| ||||||||| ||||||||| | ||||| |||  |||||||    
T  7723250 cgacaccgatacatataattatgctgaattatatgattttctcaaattattagcagtgtccacgtgtcagtgt 7723322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 8776964 - 8777024
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||| |||||||||||||||| | |||||| | |||||| ||||||||| | |||||||||    
T  8776964 tgtcgtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaattatta 8777024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 8931610 - 8931662
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||||||| |||||||||| ||||||| ||||| ||| | ||||||    
T  8931610 acacatataattatactgaattatgttattttctcaaatttttagctgtgtcg 8931662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 14155238 - 14155298
Alignment:
Q  207 ccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    ||||||||||||||| |||| | | || ||||||||||||||| ||||||| | |||||||    
T  14155238 ccgacaccaacacatgtaatcacactgtattatgtgattttctcaaattatgatcggtgtc 14155298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 21885843 - 21885779
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgt 280  Q
    ||||||||||||| | | |||||||| ||||| ||||||||||| ||||||| ||| ||| ||||    
T  21885843 acacatataattagattaaattatgttatttttttaaattattatcggtgtcaacgtatccgtgt 21885779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 26562740 - 26562688
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||||| | |||||||||||||||||| ||||| ||| | ||||||    
T  26562740 acacatataattacactgaattatgtgattttctcaaatttttagcagtgtcg 26562688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 33340393 - 33340445
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| |||||||| ||| || ||||||||||| ||||||||| ||||||||||    
T  33340393 acacttataattacagtaaaatatgtgatttttttaaattatcaacggtgtcg 33340445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 35125705 - 35125653
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| |||||||| ||| || ||||||||||| ||||||||| ||||||||||    
T  35125705 acacttataattacagtaaaatatgtgatttttttaaattatcaacggtgtcg 35125653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 6e-20; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 190 - 268
Target Start/End: Original strand, 4786320 - 4786398
Alignment:
Q  190 tcgaacacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||||| |||| | ||||||||| ||||||||||||| | ||||||||||||||||||||||||||||| |||||||    
T  4786320 tcgaacacatgtcgtatccgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcg 4786398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 11803316 - 11803259
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||    
T  11803316 acaccaacacatataattacactgaattatgtgattttcttaaattattaacagtgtc 11803259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 34897148 - 34897081
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacg 271  Q
    ||||||||| | ||||||||||||| | |||||||||||||||||| ||||||||| |||||||||||    
T  34897148 tgtccgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacg 34897081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 11927086 - 11927146
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||| ||||||||||||| | |||||||||||||||| | ||||||||||| ||||||    
T  11927086 cgacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcg 11927146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 13844592 - 13844656
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||| ||||||||||||| | | |||||||||||||||| ||||||||| | ||||||    
T  13844592 tgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcg 13844656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 27213598 - 27213546
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| | ||||||    
T  27213598 acacatataattacagtgaattatgtgattttctgaaattattagcagtgtcg 27213546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 31236573 - 31236637
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||| |||| ||||||||||||| | |||||||||||||||||| ||||||||| | ||||||    
T  31236573 tgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcg 31236637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 271
Target Start/End: Original strand, 14634141 - 14634204
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacg 271  Q
    ||||||||||| ||||||||| | |||||||| | ||||||||||||| ||| |||||||||||    
T  14634141 cgacaccaacaaatataattacactgaattatataattttcttaaattgttagcggtgtcgacg 14634204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 271
Target Start/End: Complemental strand, 36934729 - 36934666
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacg 271  Q
    |||| |||||||||||||||| | |||||||||||||||| |  |||||||| |||||||||||    
T  36934729 cgacgccaacacatataattacaatgaattatgtgattttttcgaattattagcggtgtcgacg 36934666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 8798839 - 8798889
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||| ||||    
T  8798839 acacatataattatattgaattatgttattttctcaaattattaacagtgt 8798889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 31109512 - 31109578
Alignment:
Q  202 catgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||||  ||||||||| ||| | |||||| | ||||||||| ||||||||||||||||||    
T  31109512 catgtccgacactgacacatatagttagactgaattgtttgattttctcaaattattaacggtgtcg 31109578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 33405375 - 33405437
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaac 261  Q
    |||| ||||||||||| ||||||||||||| | | ||||||||| |||||| |||||||||||    
T  33405375 tgtcgtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattattaac 33405437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 3025624 - 3025559
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||| |||| ||||||||||  |||| |||||||| | |||||||||||||||||| |||||||||    
T  3025624 acacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttctcaaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 9936867 - 9936810
Alignment:
Q  214 caacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacg 271  Q
    |||||||||| |||||| |||||||| | ||||||||||||||||| || ||||||||    
T  9936867 caacacatatgattatattgaattatatcattttcttaaattattatcgatgtcgacg 9936810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 209 - 266
Target Start/End: Original strand, 33382020 - 33382077
Alignment:
Q  209 gacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    |||||| |||||||||||||   |||||||||| ||||||||||||||||| ||||||    
T  33382020 gacaccgacacatataattactctgaattatgtcattttcttaaattattatcggtgt 33382077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 11944724 - 11944664
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||| ||||||||||||| | ||| |||||||||||| | ||||||||||| ||||||    
T  11944724 cgacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcg 11944664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 12606825 - 12606889
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| |||||| ||||||||||||| | |||||||| ||||||||| ||||||||| | ||||||    
T  12606825 tgtctgacaccgacacatataattacattgaattatatgattttctcaaattattagcagtgtcg 12606889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 22596056 - 22595980
Alignment:
Q  205 gtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgtt 281  Q
    ||||||||||||||| | |||||| | |||||||||| ||||| ||||||||||| | |||||| ||  ||||||||    
T  22596056 gtccgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgtt 22595980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 24362210 - 24362262
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||||| | |||||||||||||| ||| ||||||||| ||||||||    
T  24362210 acacatataattacactgaattatgtgattctctcaaattattagcggtgtcg 24362262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 270
Target Start/End: Complemental strand, 29776085 - 29776033
Alignment:
Q  218 acatataattatagtgaattatgtgattttcttaaattattaacggtgtcgac 270  Q
    ||||||||||||| ||||||| |||||||||| ||||||||| | ||||||||    
T  29776085 acatataattatactgaattacgtgattttctcaaattattagcagtgtcgac 29776033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 31580124 - 31580180
Alignment:
Q  205 gtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaac 261  Q
    |||||||| | |||| |||||||| | | ||||||||||||||||||||||||||||    
T  31580124 gtccgacatcgacacctataattacactcaattatgtgattttcttaaattattaac 31580180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 12985455 - 12985400
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||||||| ||| |||| |||| | |||||||||||||||||| |||||||||    
T  12985455 tgtccgacaccgacatatatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 38278171 - 38278226
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||| ||||| | || |||||||||| | ||||||||||||||||||||||||||    
T  38278171 tgtccaacaccgatacgtataattatattaaattatgtgattttcttaaattatta 38278226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 39954288 - 39954339
Alignment:
Q  217 cacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||||||||| | | |||||||||||||||| ||||||||| ||||||||    
T  39954288 cacatataattacactaaattatgtgattttctcaaattattagcggtgtcg 39954339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 4611583 - 4611533
Alignment:
Q  218 acatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||| | |||||||||| ||||||| ||||||||| ||||||||    
T  4611583 acatataattacactgaattatgttattttctcaaattattagcggtgtcg 4611533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 14134757 - 14134707
Alignment:
Q  209 gacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||||| ||| ||||||||| | |||||||||||||||||| |||||||||    
T  14134757 gacaccgacatatataattacactgaattatgtgattttctcaaattatta 14134707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Original strand, 12570736 - 12570793
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    ||||||||| ||||||||| | | ||||||| | |||||||||||||||| |||||||    
T  12570736 acaccaacatatataattacacttaattatgcgtttttcttaaattattagcggtgtc 12570793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 258
Target Start/End: Original strand, 16869732 - 16869765
Alignment:
Q  225 attatagtgaattatgtgattttcttaaattatt 258  Q
    ||||||||||||||||| ||||||||||||||||    
T  16869732 attatagtgaattatgtcattttcttaaattatt 16869765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 270
Target Start/End: Original strand, 20679396 - 20679457
Alignment:
Q  209 gacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgac 270  Q
    |||||| |||| |||||||| | |||| ||||||||||||| |||||||||  |||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgac 20679457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 26902175 - 26902216
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttct 249  Q
    ||||||| ||||||||||||| | ||||||||||||||||||    
T  26902175 cgacaccgacacatataattacactgaattatgtgattttct 26902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 38079062 - 38079009
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattat 257  Q
    ||||||||| | || |||||||||| | ||||| ||||||||||||||||||||    
T  38079062 tgtccgacatcgacgcatataattacactgaatcatgtgattttcttaaattat 38079009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 211 - 259
Target Start/End: Complemental strand, 3508108 - 3508060
Alignment:
Q  211 caccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||||||||| |||| | |||||||||| ||||||| |||||||||    
T  3508108 caccaacacatatgattacattgaattatgttattttctcaaattatta 3508060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 22652035 - 22651975
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||| |||| | |||||||| |||||||||||||||| | ||||||||| | ||||||    
T  22652035 cgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcg 22651975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 24669497 - 24669433
Alignment:
Q  203 atgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    |||| ||||||| |||| | |||||| | |||||||||| |||| || |||||||||||||||||    
T  24669497 atgttcgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtc 24669433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 37380989 - 37380949
Alignment:
Q  220 atataattatagtgaattatgtgattttcttaaattattaa 260  Q
    ||||||||||| |||||||||||||| | ||||||||||||    
T  37380989 atataattatattgaattatgtgattatgttaaattattaa 37380949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 40332264 - 40332200
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatt 258  Q
    |||| |||| ||||| ||||| |||| | |||||| | |||||||||||||||||| ||||||||    
T  40332264 acacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 41838147 - 41838195
Alignment:
Q  232 tgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgt 280  Q
    |||||||||||||||| ||||||||||| | |||||||||  |||||||    
T  41838147 tgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgt 41838195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 6e-17; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 22440609 - 22440678
Alignment:
Q  217 cacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttcatgt 286  Q
    |||||||||||| | |||||||||||||||||| ||||||||||||||||||| | |||||||| |||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgtcgatgtatcagtgtccatgt 22440678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 8423709 - 8423778
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| ||||||||||| |||  |||||||| | |||||||||||||||||| ||||||||| ||||||||    
T  8423709 tgtcgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtcg 8423778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 9996913 - 9996849
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatt 258  Q
    |||| ||| ||||| |||||| | ||||||||||||| |||||||||||||||||| ||||||||    
T  9996913 acacgtgttatgtctgacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 218 - 265
Target Start/End: Complemental strand, 903971 - 903924
Alignment:
Q  218 acatataattatagtgaattatgtgattttcttaaattattaacggtg 265  Q
    ||||||||||| | |||||||||||||||||| |||||||||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaacggtg 903924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 5775359 - 5775418
Alignment:
Q  209 gacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||| ||||||||||||| | | |||||||||||||||| |||||||||| |||||||    
T  5775359 gacaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgtcg 5775418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 232 - 299
Target Start/End: Original strand, 34515898 - 34515965
Alignment:
Q  232 tgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttcatgttatgtctgatgtt 299  Q
    |||||||||| |||||||| |||||||| | |||||||||  ||||||||| |||| |||||||||||    
T  34515898 tgaattatgtcattttcttgaattattatccgtgtcgacgtgtcagtgttcgtgttgtgtctgatgtt 34515965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 23292972 - 23293046
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| |||| ||||||||||| |||| | |||||||| |||||||||||||||| | ||||||||| | ||||||    
T  23292972 acacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcg 23293046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 294
Target Start/End: Complemental strand, 33950199 - 33950109
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttcatgttatgtctg 294  Q
    |||| |||||| |||||||| |||| | | |||||||||||||||| ||||||||| ||| || || |  ||||||||| |||||||||||    
T  33950199 tgtctgacaccgacacatatgattacattaaattatgtgattttctcaaattattagcggcgttgaagtgtcagtgttcgtgttatgtctg 33950109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 280
Target Start/End: Original strand, 40179618 - 40179708
Alignment:
Q  190 tcgaacacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgt 280  Q
    |||||||  |||| ||||||||||| || |||||||||| | |||||||||||||||| | ||| |||||| |||||| |||  |||||||    
T  40179618 tcgaacatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgt 40179708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 36635381 - 36635332
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||| |||||||||||||| | |||||||||||||||||| |||||||||    
T  36635381 acacgaacacatataattacactgaattatgtgattttctcaaattatta 36635332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 48139341 - 48139260
Alignment:
Q  190 tcgaacacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacg 271  Q
    |||||||  |||| |||| |||| ||||||||||||||| | | ||||||| |||| ||| ||||||||||| |||||||||    
T  48139341 tcgaacatgtgtcgtgtctgacatcaacacatataattacattaaattatgagattatctcaaattattaacagtgtcgacg 48139260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 49652982 - 49653023
Alignment:
Q  218 acatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||||||||| |||||||| |||||||||||||||||||    
T  49652982 acatataattatactgaattatctgattttcttaaattatta 49653023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 54580009 - 54580074
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||| |||| ||||||||||| |||| |||||||| | |||||||||||||||| | |||||||||    
T  54580009 acacgtgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattatta 54580074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 203 - 280
Target Start/End: Original strand, 55940998 - 55941075
Alignment:
Q  203 atgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgt 280  Q
    |||||||| ||| |||||||| |||||| | |||||||| |||||||||||||||||  ||||| |||| || |||||    
T  55940998 atgtccgatacctacacatatgattatactaaattatgtaattttcttaaattattattggtgttgacgtataagtgt 55941075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 207 - 259
Target Start/End: Complemental strand, 15029825 - 15029773
Alignment:
Q  207 ccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||||||||||||||||||||| | ||||||||||||| || | |||||||||    
T  15029825 ccgacaccaacacatataattacactgaattatgtgatattttcaaattatta 15029773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 18576038 - 18576086
Alignment:
Q  209 gacaccaacacatataattatagtgaattatgtgattttcttaaattat 257  Q
    |||||||||||||||||||| |  ||||||||||||||||| |||||||    
T  18576038 gacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 40613501 - 40613449
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||||| | |||||||||||||||||| ||| ||||| ||||||||    
T  40613501 acacatataattacactgaattatgtgattttctcaaaatattagcggtgtcg 40613449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 15659760 - 15659811
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||||||||||||||||| |  |||||||| |||||||| |||||||||    
T  15659760 cgacaccaacacatataattacaccgaattatgagattttctcaaattatta 15659811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 19097880 - 19097935
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttct 249  Q
    |||| |||||||| ||||||| ||| ||||||||||| ||||||| ||||||||||    
T  19097880 acacgtgtcatgttcgacaccgacaaatataattatactgaattacgtgattttct 19097935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 848009 - 847959
Alignment:
Q  209 gacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||||| |||| | ||||||||||||||||||| ||||||| |||||||||    
T  848009 gacaccgacacttgtaattatagtgaattatgtaattttctcaaattatta 847959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 16189772 - 16189710
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    |||||| |||| ||||| ||||||| | |||||||||||||||||| ||||| ||| ||||||    
T  16189772 tgtccgtcaccgacacacataattacactgaattatgtgattttctcaaatttttagcggtgt 16189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 13134501 - 13134460
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattat 257  Q
    ||||||||||||| | | ||||||||||||||||||||||||    
T  13134501 acacatataattacactaaattatgtgattttcttaaattat 13134460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 21945571 - 21945502
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||||||||||||| |||| | |||||| | |||||||||| ||||| | ||||||||| | ||||||    
T  21945571 tgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcg 21945502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 26504307 - 26504360
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcga 269  Q
    ||||||||||||| | |||| ||| ||||||||||||||||||| | |||||||    
T  26504307 acacatataattacactgaactatttgattttcttaaattattagcagtgtcga 26504360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 35723392 - 35723445
Alignment:
Q  216 acacatataattatagtgaattatgtg-attttcttaaattattaacggtgtcg 268  Q
    ||||||||||||| | ||||||||||| ||||||| ||||||||| ||||||||    
T  35723392 acacatataattacattgaattatgtgtattttctcaaattattagcggtgtcg 35723445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 36386205 - 36386262
Alignment:
Q  202 catgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||||||||||||||||| | |||||| | ||||||||||  |||||| |||||||||    
T  36386205 catgtccgacaccaacacctttaattacactgaattatgtccttttctcaaattatta 36386262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 249
Target Start/End: Original strand, 44132644 - 44132685
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttct 249  Q
    ||||||| ||||||||||||||| ||||||| ||||||||||    
T  44132644 cgacaccgacacatataattatactgaattacgtgattttct 44132685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 56110863 - 56110806
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    ||||| ||||||||||||||| ||||||||||||| ||   ||||||||| |||||||    
T  56110863 acaccgacacatataattatattgaattatgtgatgtttacaaattattatcggtgtc 56110806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 267
Target Start/End: Original strand, 3712508 - 3712568
Alignment:
Q  208 cgacacca-acacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    |||||||| ||||||||||||| | |||||||  ||||||||| ||||||||| |||||||    
T  3712508 cgacaccagacacatataattacattgaattacatgattttctcaaattattagcggtgtc 3712568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 11651158 - 11651206
Alignment:
Q  232 tgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgt 280  Q
    |||||||||||||||| ||||||||||| | |||||||||  |||||||    
T  11651158 tgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgt 11651206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 21539879 - 21539927
Alignment:
Q  220 atataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||| | | |||||| |||||||||||||||||||| |||||||    
T  21539879 atataattacactaaattatatgattttcttaaattattaatggtgtcg 21539927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 42015024 - 42014980
Alignment:
Q  202 catgtccgacaccaacacatataattatagtgaa-ttatgtgatt 245  Q
    ||||||||||||||||||||||||||| | |||| ||||||||||    
T  42015024 catgtccgacaccaacacatataattacactgaatttatgtgatt 42014980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 43368138 - 43368078
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||||||||||||| || ||| | || | ||| ||||||||||||||||| ||||||||    
T  43368138 cgacaccaacacatatgatcatattaaactgtgtcattttcttaaattattatcggtgtcg 43368078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 32287449 - 32287525
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgac 270  Q
    ||||||||||||||||||||| ||||||||| ||  | |||||||||||||||||| | ||||||| ||||||||||    
T  32287449 acacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttctcagattattagcggtgtcgac 32287525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 260
Target Start/End: Original strand, 35297672 - 35297724
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaa 260  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  35297672 cgacaccaacacatataattataatgaattatgtgattttctcaaattattaa 35297724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 19206108 - 19206049
Alignment:
Q  209 gacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcg 19206049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 22484093 - 22484024
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||| |||||| ||||||||||||||| |||||||||  ||||||| ||||||||| ||||||||    
T  22484093 tgtcatgtctgacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcg 22484024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 20549854 - 20549790
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||| ||||||||||||| | ||||||| |||||||||| ||||||||| ||||||||    
T  20549854 tgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcg 20549790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 204 - 280
Target Start/End: Complemental strand, 26733367 - 26733291
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgt 280  Q
    ||||||||||| |||||| |||||| | |||||||||||||||| | ||||||||| |||||||||||  |||||||    
T  26733367 tgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgt 26733291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 3721156 - 3721101
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||||||| ||||||||||||||| | |||||||||||||||| |||||||||    
T  3721156 tgtccgacaccgacacatataattatactaaattatgtgattttctcaaattatta 3721101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 24146879 - 24146824
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||| |||||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  24146879 tgtcagacaccgacacatataattatattgaattatgtgattttctaaaattatta 24146824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 194 - 280
Target Start/End: Complemental strand, 5835320 - 5835234
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgt 280  Q
    |||| ||||||||| |||||| ||||||||||||| | |||||||||| ||||||| ||| |||||  ||||||| || ||||||||    
T  5835320 acacatgtcatgtctgacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgtcggcgtatcagtgt 5835234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 23849460 - 23849509
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||||||||    
T  23849460 acaccgacacatataattatactgaattatgtgtttttcttaaattatta 23849509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 22602710 - 22602770
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||| ||||||||||||| | |||||||||||||||||| |||| ||| |||||||||    
T  22602710 cgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcg 22602770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 212 - 267
Target Start/End: Complemental strand, 8160471 - 8160416
Alignment:
Q  212 accaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    ||||||||||||||||| | | |||||||| ||||||||||||||||| |||||||    
T  8160471 accaacacatataattacactaaattatgtaattttcttaaattattagcggtgtc 8160416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 315
Target Start/End: Complemental strand, 25481965 - 25481854
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttcatgttatgtctgatgttcata 303  Q
    |||||||||||||||| | |||||| | |||||||||||||||| | ||||||||| | |||||| ||  ||| ||| |||||| |||| ||||| | |     
T  25481965 tgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtccgatgtccgtg 25481866  T
Q  304 tctgcatccgtg 315  Q
    |||| |||||||    
T  25481865 tctgtatccgtg 25481854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 27732247 - 27732298
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||| ||||    
T  27732247 acacatataattacactgaattatgtaattttcttaaattattaacgttgtc 27732298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 32308171 - 32308100
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttcatgtt 287  Q
    ||||||| ||||| | |||||||||||||||||| ||||||||| |||||||| ||  ||||||| ||||||    
T  32308171 acacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccatgtt 32308100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 27093415 - 27093473
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||| || |||||||||| | | |||||||||||||||||||||||||| ||||||||    
T  27093415 acaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtcg 27093473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 27184886 - 27184828
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||| || |||||||||| | | |||||||||||||||||||||||||| ||||||||    
T  27184886 acaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtcg 27184828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 17851482 - 17851429
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcga 269  Q
    ||||||||||||| | |||||||||||||||||| ||||||||| |||| ||||    
T  17851482 acacatataattacactgaattatgtgattttctaaaattattagcggtatcga 17851429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 49088863 - 49088807
Alignment:
Q  216 acacatataattatagtgaattat--gtgattttcttaaattattaacggtgtcgac 270  Q
    ||||||||||||||| | ||||||  |||||||| ||||||||||||||||||||||    
T  49088863 acacatataattatactaaattatacgtgatttttttaaattattaacggtgtcgac 49088807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 294
Target Start/End: Complemental strand, 598281 - 598181
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttcatgttatgtct 293  Q
    |||| |||| |||| |||||| |||| || ||||| | | ||||| |||||||||||||||||||| ||||||||| |  ||||||| | ||| ||||||    
T  598281 acacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtcatgtct 598182  T
Q  294 g 294  Q
    |    
T  598181 g 598181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 1433513 - 1433453
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||| ||||||||||||| |   ||| |||||||||||| ||||||||||||||||||    
T  1433513 cgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcg 1433453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 9482996 - 9482944
Alignment:
Q  205 gtccgacaccaacacatataattatagtgaattatgtgattttcttaaattat 257  Q
    |||||||||| ||||||||||||| | |||||| ||||||||||| |||||||    
T  9482996 gtccgacaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 17307952 - 17307904
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaatta 256  Q
    ||||||||||||||||||||| | |||||||||| ||||||| ||||||    
T  17307952 cgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 38143286 - 38143230
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaa 260  Q
    |||| |||||||||||||||||||| | | |||||||||||||| | ||||||||||    
T  38143286 tgtctgacaccaacacatataattacattaaattatgtgattttttcaaattattaa 38143230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 261
Target Start/End: Complemental strand, 5233686 - 5233635
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaac 261  Q
    ||||||||||||||||||| | |  ||||||||||||||| |||||||||||    
T  5233686 acaccaacacatataattacactagattatgtgattttctcaaattattaac 5233635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 12278886 - 12278843
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||||||||| | |||||||||| |||||||||||||||||    
T  12278886 acacatataattacactgaattatgtcattttcttaaattatta 12278843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 21826336 - 21826281
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||||||| |||||||| |||| | ||| |||||||||||| |||||||||||    
T  21826336 tgtccgacaccgacacatattattagactgagttatgtgatttttttaaattatta 21826281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 29787373 - 29787429
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||||||||||  |||| | |||||||||||||||||| ||||||||| ||||||||    
T  29787373 acaccaacacata--attacactgaattatgtgattttctcaaattattagcggtgtcg 29787429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 218 - 280
Target Start/End: Complemental strand, 23191945 - 23191883
Alignment:
Q  218 acatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgt 280  Q
    |||| |||||| | |||| ||||||||||||| ||||||||| |||||||| || ||||||||    
T  23191945 acatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgt 23191883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 33384584 - 33384642
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||||||||||| | | ||||||  |||||||| | ||||||||||||||||    
T  33384584 acaccaacacatataattacactaaattataggattttctcagattattaacggtgtcg 33384642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 10377555 - 10377506
Alignment:
Q  219 catataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||||||| | |||||||| ||||||||||| ||||||||| ||||||    
T  10377555 catataattacactgaattatatgattttcttatattattaacagtgtcg 10377506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 11700848 - 11700803
Alignment:
Q  222 ataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    ||||||| | |||||||||||||||| | |||||||||||||||||    
T  11700848 ataattacattgaattatgtgattttgtcaaattattaacggtgtc 11700803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 15680882 - 15680817
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||| |||| ||||||||||| |||| |||||||| | | |||||||||||||| || ||||||||    
T  15680882 acacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgattttttttaattatta 15680817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 249
Target Start/End: Original strand, 18213029 - 18213074
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttct 249  Q
    ||||||||||| ||||||||||||| | | ||||||||||||||||    
T  18213029 tgtccgacaccgacacatataattacactaaattatgtgattttct 18213074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 269
Target Start/End: Original strand, 36297369 - 36297406
Alignment:
Q  232 tgaattatgtgattttcttaaattattaacggtgtcga 269  Q
    |||||||||||||||||||||||||||| | |||||||    
T  36297369 tgaattatgtgattttcttaaattattagccgtgtcga 36297406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 39138507 - 39138462
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttct 249  Q
    ||||||||||| ||| ||||||||| | ||||||||||||||||||    
T  39138507 tgtccgacaccgacatatataattacactgaattatgtgattttct 39138462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 40657033 - 40656996
Alignment:
Q  222 ataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  40657033 ataattatattgaattaagtgattttcttaaattatta 40656996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 3520345 - 3520401
Alignment:
Q  211 caccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    |||| ||||||||||||| | |||||||| ||||||||| |||| |||| |||||||    
T  3520345 caccgacacatataattacattgaattatatgattttctcaaatgattatcggtgtc 3520401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 280
Target Start/End: Complemental strand, 5236033 - 5235973
Alignment:
Q  220 atataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgt 280  Q
    ||||||||| | | |||||| | ||||||||||||||||| |||||||||||  |||||||    
T  5236033 atataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgt 5235973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 5548727 - 5548675
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||||| | |||||||| ||||||||| ||||||| | ||||||||    
T  5548727 acacatataattacactgaattatttgattttctcaaattatcagcggtgtcg 5548675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 260
Target Start/End: Original strand, 8239058 - 8239102
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaa 260  Q
    ||||||||||||| | ||||||||  |||||||||||||||||||    
T  8239058 acacatataattacactgaattataagattttcttaaattattaa 8239102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 21828413 - 21828465
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||| ||||| | || ||||||||||||||| |||||| |||||||||||    
T  21828413 acacatacaattacaatggattatgtgattttctcaaattactaacggtgtcg 21828465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 21880220 - 21880160
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||| ||||||||||| |||| | |||||| | |||||||||| ||||||| |||||||||    
T  21880220 tgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaattatta 21880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 22868093 - 22868041
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||||| | |||||||||||||||||| | |||||||  |||||||    
T  22868093 acacatataattacactgaattatgtgattttctcatattattagtggtgtcg 22868041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 26329390 - 26329442
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||||| | |||||| |||| |||||| |||||||||||| |||||    
T  26329390 acacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcg 26329442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 28155633 - 28155569
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||| |||| | |||||| |  ||||||||| ||||||| ||||||||| ||||||||    
T  28155633 tgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcg 28155569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 280
Target Start/End: Original strand, 42720898 - 42720962
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgt 280  Q
    ||||||||||||| | | |||||||||||||| | ||||||||| ||||||| |||  |||||||    
T  42720898 acacatataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcagtgt 42720962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 7614415 - 7614475
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  7614415 cgacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcg 7614475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 7928513 - 7928449
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||| ||||||||||||| | |||||||||||||||| | ||||||||| ||||||||    
T  7928513 tgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcg 7928449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 16192750 - 16192810
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||| ||||||||||||||| | |||||||||| ||||||| ||||||||||||||||||    
T  16192750 cgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgtcg 16192810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 35223011 - 35222956
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttct 249  Q
    |||| |||||||||||||||| ||||||||||||| | ||||||||||||||||||    
T  35223011 acacgtgtcatgtccgacaccgacacatataattacattgaattatgtgattttct 35222956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 269
Target Start/End: Original strand, 40993326 - 40993397
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtga-ttttcttaaattattaacggtgtcga 269  Q
    |||| ||||||||||| ||||||||||||| | |||||||||||| |||| ||||||||||| |||||||||    
T  40993326 tgtcgtgtccgacaccgacacatataattacactgaattatgtgattttttttaaattattagcggtgtcga 40993397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 8383320 - 8383256
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||| |||| |||||||| | |||||||| ||||||||| ||||||||| ||||||||    
T  8383320 tgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcg 8383256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 21419455 - 21419511
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggt 264  Q
    ||||||||||| ||||||||| | |||||||| | ||||||||||||||||||||||    
T  21419455 cgacaccaacatatataattacattgaattatattattttcttaaattattaacggt 21419511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 25093565 - 25093501
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||| ||||||||||||| | |||||| ||||||||||| |||| |||||| ||||||    
T  25093565 tgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcg 25093501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 32804548 - 32804600
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||||| | | |||||||||||||||| ||||||||||||||||||    
T  32804548 acacatataattacactaaattatgtgattttctcaaattattaacggtgtcg 32804600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 45451621 - 45451561
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||| ||||||||||| |||||||| |||||| |||| ||||||||||||| |||||||||    
T  45451621 tgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattatta 45451561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 4201459 - 4201397
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    |||| |||||||||| ||||||||| | | |||||||||||||| | ||||||||||||||||    
T  4201459 tgtcggacaccaacatatataattacacttaattatgtgattttttcaaattattaacggtgt 4201397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 8789541 - 8789599
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattat 257  Q
    |||| ||||||||||| ||||||||||||| |  ||||||||||||||||| |||||||    
T  8789541 tgtcgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 16789071 - 16789018
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaac 261  Q
    |||||||||||| |||||||| | |||||||| ||||||| |||||||||||||    
T  16789071 cgacaccaacacttataattacactgaattatatgatttttttaaattattaac 16789018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 11313800 - 11313860
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||| |||||||||||||| | | |||||||||||||||| ||||||||| | ||||||    
T  11313800 cgacactaacacatataattacactaaattatgtgattttctcaaattattagcagtgtcg 11313860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 49505150 - 49505210
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggt 264  Q
    ||||||||||  ||||||||||||| | | |||||||||||||||| ||||||||| ||||    
T  49505150 tgtccgacactgacacatataattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 255
Target Start/End: Original strand, 6780415 - 6780466
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaatt 255  Q
    ||||||||||||||||||||||||| | |||| || |||||||||| |||||    
T  6780415 tgtccgacaccaacacatataattacactgaactacgtgattttctcaaatt 6780466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 25948887 - 25948938
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||||||||||| |||||||| | |||||||||||||||| | |||||||||    
T  25948887 cgacaccaacacttataattacactgaattatgtgattttttcaaattatta 25948938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 28678362 - 28678311
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||| ||||||| ||||||| | |||||||||||||| |||||||||||    
T  28678362 cgacaccgacacatacaattatactaaattatgtgattttattaaattatta 28678311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 38731278 - 38731215
Alignment:
Q  207 ccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgac 270  Q
    |||||||| |||||||||| || | |||||||||||||||| | ||||||||| |||| |||||    
T  38731278 ccgacaccgacacatataactacactgaattatgtgattttttaaaattattagcggtatcgac 38731215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 1438853 - 1438803
Alignment:
Q  218 acatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||||| |||||||||||||||||| ||||| ||| || |||||    
T  1438853 acatataattatactgaattatgtgattttctcaaattgttagcgatgtcg 1438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 4466598 - 4466660
Alignment:
Q  206 tccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||||||  ||||||||  || | |||||||| ||||||||||||||||||| ||||||||    
T  4466598 tccgacaccggcacatatagctacactgaattatatgattttcttaaattattaccggtgtcg 4466660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 266
Target Start/End: Original strand, 8039835 - 8039893
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    ||||||| ||||||||||||| | |||||||| | ||||||| ||||||||| ||||||    
T  8039835 cgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgt 8039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 13807227 - 13807181
Alignment:
Q  209 gacaccaacacatataattatagtgaattatgtgattttcttaaatt 255  Q
    |||||| |||||||| |||||| |||||||||||||||||| |||||    
T  13807227 gacaccgacacatattattatattgaattatgtgattttctcaaatt 13807181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 8593202 - 8593157
Alignment:
Q  202 catgtccgacaccaacacatataattatagtgaattatgtgatttt 247  Q
    ||||||||||||| |||| | |||||||| ||||||||||||||||    
T  8593202 catgtccgacaccgacacttgtaattatactgaattatgtgatttt 8593157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 13414532 - 13414487
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttct 249  Q
    ||||||||||| ||||||||||||| | |||||||| |||||||||    
T  13414532 tgtccgacaccgacacatataattacattgaattatttgattttct 13414487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 266
Target Start/End: Original strand, 14840304 - 14840349
Alignment:
Q  221 tataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    |||||||| | |||||||||||||||||| |||||||||| |||||    
T  14840304 tataattacactgaattatgtgattttctgaaattattaatggtgt 14840349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 260
Target Start/End: Complemental strand, 2731863 - 2731819
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaa 260  Q
    ||||||||||||| | | |||||||||||||||||||| ||||||    
T  2731863 acacatataattacacttaattatgtgattttcttaaagtattaa 2731819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 9624689 - 9624649
Alignment:
Q  219 catataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||||||||| | |||||||||||||||||| |||||||||    
T  9624689 catataattacattgaattatgtgattttctcaaattatta 9624649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 11493372 - 11493424
Alignment:
Q  219 catataattatagtgaattatgtgattttcttaaattattaacggtgtcgacg 271  Q
    |||||||||| | |||||||||||||||||| | |||||||  ||||||||||    
T  11493372 catataattacactgaattatgtgattttctcacattattagtggtgtcgacg 11493424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 15314876 - 15314924
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaatta 256  Q
    ||||||||||||||||||||| | | |||||||||||||| | ||||||    
T  15314876 cgacaccaacacatataattacactaaattatgtgattttttcaaatta 15314924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 15544744 - 15544680
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgt 280  Q
    ||||| |||||||||  ||||||||||||||| | ||||||||| ||||||| |||  |||||||    
T  15544744 acacacataattatacagaattatgtgattttatcaaattattagcggtgtcaacgtgtcagtgt 15544680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 24633392 - 24633460
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    |||| ||||| ||||| ||||||||||||| | ||||||| ||||||||   ||||||||||| |||||    
T  24633392 tgtcgtgtccaacaccgacacatataattacattgaattacgtgatttttccaaattattaactgtgtc 24633460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 26290422 - 26290370
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||||| |  ||| ||||||||||||| |||||||||| |||||||    
T  26290422 acacatataattaaaccgaactatgtgattttctcaaattattaatggtgtcg 26290370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 232 - 268
Target Start/End: Original strand, 32429404 - 32429440
Alignment:
Q  232 tgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||||||||||||||||||||||||| || |||||    
T  32429404 tgaattatgtgattttcttaaattattagcgttgtcg 32429440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 260
Target Start/End: Complemental strand, 39756295 - 39756243
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaa 260  Q
    ||||||| |||| | |||||||| | |||||||||||||| ||||||||||||    
T  39756295 cgacaccgacacttgtaattatattaaattatgtgatttttttaaattattaa 39756243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 47775782 - 47775714
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagt 278  Q
    |||||||||||| |||||| | |||||||| | ||||| ||| ||||||| | ||||||||| ||||||    
T  47775782 acaccaacacatgtaattacattgaattatatcatttttttagattattatccgtgtcgacgtatcagt 47775714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 49651786 - 49651846
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||| |||| | |||||| |||||||||||||||||| | ||||||||| | ||||||    
T  49651786 cgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcg 49651846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 2784619 - 2784555
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| |||||| ||||||||||||||| | |||||||||||||||||||||| ||||||||||||    
T  2784619 tgtctgacaccgacacatataattatactcaattatgtgattttcttaaatttttaacggtgtcg 2784555  T

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Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 13436521 - 13436457
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||||||||||||||||| | ||||||||||||||| |||||||||||| | ||||||    
T  13436521 tgtccgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgtcg 13436457  T

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Target: chr1; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 28674868 - 28674801
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    |||| |||| |||||||||| ||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  28674868 tgtcgtgtctgacaccaacatatataattatactgaattatgtaattttctcaaattattaacggtgt 28674801  T

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Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 6427409 - 6427351
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||||    
T  6427409 cgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgt 6427351  T

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Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 29163372 - 29163441
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| ||||||||||| ||||||||||||| | ||||||||||||||||| |||||| ||| ||||||||    
T  29163372 tgtcgtgtccgacaccgacacatataattaaattgaattatgtgattttcctaaatttttagcggtgtcg 29163441  T

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Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 1864876 - 1864940
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||| ||||| ||||||||||||| | |||||||||||||||||| ||||||||||| ||||||    
T  1864876 tgtccaacaccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcg 1864940  T

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Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 52903312 - 52903252
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggt 264  Q
    ||||||||||| ||||||||||||| | |||||||| ||||||| ||||||||||||||||    
T  52903312 tgtccgacaccgacacatataattacactgaattatatgattttattaaattattaacggt 52903252  T

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Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 315
Target Start/End: Complemental strand, 9709883 - 9709772
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttcatgttatgtctgatgttcata 303  Q
    ||||||||||| ||||||||||||| |  ||||||||||||||||| ||||||||| |||||| | |   ||||||| | |||  |||||||||| |||     
T  9709883 tgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtctgatgtccatg 9709784  T
Q  304 tctgcatccgtg 315  Q
    |||| |||||||    
T  9709783 tctgtatccgtg 9709772  T

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Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 13997940 - 13997882
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||| ||||||||||||| | |||||||||||||||| |||||| |||||||||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcg 13997882  T

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Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 19637831 - 19637766
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcga 269  Q
    ||||||||||| |||||||| |||| | ||||| |||| ||||||||||||||||| |||||||||    
T  19637831 tgtccgacaccgacacatatgattacattgaataatgtcattttcttaaattattatcggtgtcga 19637766  T

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Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 21530757 - 21530688
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| ||||||||||| |||| ||||||||||   |||||| ||||||||| ||||||||||||||||||    
T  21530757 tgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcg 21530688  T

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Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 206 - 259
Target Start/End: Original strand, 35999320 - 35999373
Alignment:
Q  206 tccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||| ||||||||||||||||| | |||||| |||||||||||||||||||    
T  35999320 tccgacatcaacacatataattatactaaattatatgattttcttaaattatta 35999373  T

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Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 268
Target Start/End: Complemental strand, 36878524 - 36878460
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| |||||| |||| |||||||| | |||||||||||||||||| ||||||||| ||||||||    
T  36878524 tgtcagacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcg 36878460  T

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Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 39953142 - 39953206
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||| ||||||| ||||| | | |||||||||||||||| ||||||||| ||||||||    
T  39953142 tgtccgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcg 39953206  T

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Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 7988447 - 7988514
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacg 271  Q
    |||||||||||||||| ||| |||| | |||||||||| | ||||||||||||||| | |||||||||    
T  7988447 tgtccgacaccaacacttatgattacattgaattatgtcactttcttaaattattatcagtgtcgacg 7988514  T

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Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 34257922 - 34257973
Alignment:
Q  220 atataattatagtgaattatgtgattttcttaaattattaacggtgtcgacg 271  Q
    ||||||||| | | |||||||||||||| |||||||||||||||||||||||    
T  34257922 atataattacactaaattatgtgattttattaaattattaacggtgtcgacg 34257973  T

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Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 38078652 - 38078735
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttc 282  Q
    |||| ||||||||||| |||| | |||||| | |||||||||||||||| | ||||||||| | |||||||||  |||||||||    
T  38078652 tgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttc 38078735  T

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Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 40181934 - 40181879
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||||||| | ||||||||||| | |||||||||||||||||| |||||||||    
T  40181934 tgtccgacaccgatacatataattacactgaattatgtgattttctcaaattatta 40181879  T

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Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 279
Target Start/End: Complemental strand, 19324612 - 19324550
Alignment:
Q  217 cacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtg 279  Q
    |||||||||||| | |||||||||||||||||| ||||||| | | ||||||||| |||||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattatcagcagtgtcgacgtatcagtg 19324550  T

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Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 12713329 - 12713378
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||| ||||||||||| | | ||||||||||||||||||||||||||    
T  12713329 acaccaatacatataattacactaaattatgtgattttcttaaattatta 12713378  T

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Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 12717420 - 12717469
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||| ||||||||||| | | ||||||||||||||||||||||||||    
T  12717420 acaccaatacatataattacactaaattatgtgattttcttaaattatta 12717469  T

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Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 208 - 269
Target Start/End: Original strand, 20157350 - 20157411
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcga 269  Q
    ||||||| |||||||| |||| | |||||||||||||||||| | ||||||| |||||||||    
T  20157350 cgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcga 20157411  T

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Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 30749903 - 30749858
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttct 249  Q
    ||||||||||| ||||||||||||| | ||||||||||||||||||    
T  30749903 tgtccgacaccgacacatataattacactgaattatgtgattttct 30749858  T

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Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 30771354 - 30771309
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttct 249  Q
    ||||||||||| ||||||||||||| | ||||||||||||||||||    
T  30771354 tgtccgacaccgacacatataattacactgaattatgtgattttct 30771309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 44482289 - 44482240
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattat 257  Q
    ||||||| ||||||||||||| | |||||||||||||||||| |||||||    
T  44482289 cgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

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Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 2288165 - 2288218
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||||||| |||||||  |||| | ||||||||||||||||||||||||||||    
T  2288165 tgtccgacaccgacacata--attacattgaattatgtgattttcttaaattatta 2288218  T

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Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 5376500 - 5376560
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||| |||| | |||||| | |||||||||| ||||||||||||||||| ||||||||    
T  5376500 cgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcg 5376560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 286
Target Start/End: Original strand, 10572591 - 10572667
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttcatgt 286  Q
    ||||| |||||| |||||| |  ||||||||||||||||| |||||||||  ||||||| ||  |||||||||||||    
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgt 10572667  T

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Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 25098563 - 25098615
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||||| | |||||||||||||||||| ||||||| | ||||||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattatcagcggtgtcg 25098615  T

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Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 7918219 - 7918262
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||||||||| | |||||||||||||||||| |||||||||    
T  7918219 acacatataattacactgaattatgtgattttctcaaattatta 7918262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 14332638 - 14332693
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||||||| | ||||||||||| | | |||||||||||||||| |||||||||    
T  14332638 tgtccgacaccgagacatataattacactaaattatgtgattttctcaaattatta 14332693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 17425101 - 17425152
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    ||||||||||||| | |||||||||||||||| | ||||||||| |||||||    
T  17425101 acacatataattacattgaattatgtgattttatcaaattattatcggtgtc 17425152  T

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Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 27471567 - 27471622
Alignment:
Q  209 gacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggt 264  Q
    ||||||||||||| |||||| | ||||||||||| |||||| ||||||||| ||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggt 27471622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 267
Target Start/End: Complemental strand, 34371772 - 34371714
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    ||||||| ||||||||||||| | ||||||||||||||||| | |||||||| |||||||    
T  34371772 cgacaccgacacatataattacactgaattatgtgattttc-tcaattattagcggtgtc 34371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 38503378 - 38503319
Alignment:
Q  209 gacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||| ||||||||||||| | |||| ||| ||||||||| ||||||||| ||||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcg 38503319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 2896107 - 2896181
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| |||| |||| |||||| ||| |||||  || | |||||||||||||||||| ||||||||| ||||||||    
T  2896107 acacatgtcgtgtctgacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcg 2896181  T

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Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 5898252 - 5898326
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| |||| |||| |||||| || |||||||||| | |||||||||||||||| | | ||||||| ||||||||    
T  5898252 acacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgtcg 5898326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 32724106 - 32724172
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttc 282  Q
    ||||||||||||| | | |||||||| | ||||| |||||||||||| ||||| || ||||||||||    
T  32724106 acacatataattacattaaattatgtaaatttctcaaattattaacgatgtcggcgtatcagtgttc 32724172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 1262928 - 1262883
Alignment:
Q  223 taattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||||| |||||||||||||||||| ||||||||| | ||||||    
T  1262928 taattatattgaattatgtgattttctcaaattattagctgtgtcg 1262883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 282
Target Start/End: Original strand, 19562622 - 19562695
Alignment:
Q  209 gacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttc 282  Q
    |||||| ||||||||||||| | |||| |||| |||||||| ||||||||| | |||||| ||  |||||||||    
T  19562622 gacacctacacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtcagtgttc 19562695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 267
Target Start/End: Complemental strand, 22781503 - 22781442
Alignment:
Q  206 tccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    |||||||||||  |||||||||||| | |||||| ||||||| | ||||||||| |||||||    
T  22781503 tccgacaccaatgcatataattatatttaattatatgattttataaaattattagcggtgtc 22781442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 25361937 - 25361896
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattat 257  Q
    ||||||||||||| | |||||||||||||||||| |||||||    
T  25361937 acacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 36906051 - 36905998
Alignment:
Q  213 ccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    ||||||||||||||||   |||||||||||||||||| | ||||||| ||||||    
T  36906051 ccaacacatataattactctgaattatgtgattttctcagattattagcggtgt 36905998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 268
Target Start/End: Original strand, 38075965 - 38076030
Alignment:
Q  203 atgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||||||||| |||||||| |||| | ||| ||||||||||| || ||||||||| | ||||||    
T  38075965 atgtccgacaccgacacatatgattacactgacttatgtgatttactcaaattattagcagtgtcg 38076030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 398773 - 398825
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| |||||||| | |||||||||||||||| | ||||||||| ||||||||    
T  398773 acacctataattacactgaattatgtgattttttcaaattattagcggtgtcg 398825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 9828103 - 9828043
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||| ||||||| ||||| | |||||||||||||||| | |||||||||  |||||||    
T  9828103 cgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcg 9828043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 16252888 - 16252944
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    |||| |||||||||||||| | ||||| || | |||||||| |||||||||||||||    
T  16252888 acacgaacacatataattacactgaatcatatcattttcttgaattattaacggtgt 16252944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 17831539 - 17831591
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||||| |||| | ||||| |||||||||||| ||||||||| ||||||||    
T  17831539 acacatatgattacactgaataatgtgattttctcaaattattagcggtgtcg 17831591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 39130763 - 39130819
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaa 260  Q
    ||||||||||| ||||||||||||| | | |||||| | ||||||| ||||||||||    
T  39130763 tgtccgacaccgacacatataattacactaaattatataattttctaaaattattaa 39130819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 41877466 - 41877530
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||| |||| | |||||| | | |||||||| ||||||| ||||||||| ||||||||    
T  41877466 tgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcg 41877530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 28907 - 28849
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||| ||||||||||||| | ||||||||| |||||||||||||||||||||||||||    
T  28907 acaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtcg 28849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 99952 - 99890
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgac 270  Q
    ||||||||||||||||||||| | |||||||||| ||||||| ||||||||| ||||||||||    
T  99952 cgacaccaacacatataattacattgaattatgttattttctaaaattattatcggtgtcgac 99890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 28588665 - 28588734
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| ||||||||||| |||| |||||||| | |||||||||||||||||| ||||||||| ||||||||    
T  28588665 tgtcgtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcg 28588734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 30502379 - 30502446
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    |||| ||||||||||| ||||||||||||| | ||||||| |||||||||| ||||||||| ||||||    
T  30502379 tgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 30542722 - 30542789
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    |||| ||||||||||| ||||||||||||| | ||||||| |||||||||| ||||||||| ||||||    
T  30542722 tgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 3966562 - 3966502
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||| ||||||||||||| | |||||| ||||||||||| ||||||||| ||||||||    
T  3966562 cgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcg 3966502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 270
Target Start/End: Original strand, 38749565 - 38749625
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgac 270  Q
    ||||||||||||||||||| | |||||||||| ||||| | ||||||||| ||||||||||    
T  38749565 acaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgtcgac 38749625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 6471889 - 6471940
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||| ||||||||||||| | |||||||||||||||||| |||||||||    
T  6471889 cgacacccacacatataattacactgaattatgtgattttctcaaattatta 6471940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 17925172 - 17925223
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||| |||||||| |||| | ||||||||||||||||||||||||||||    
T  17925172 cgacaccgacacatattattacattgaattatgtgattttcttaaattatta 17925223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 22423812 - 22423863
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||| ||| ||||||||||| |||||||||||||||||| |||||||||    
T  22423812 cgacaccgacatatataattatattgaattatgtgattttctcaaattatta 22423863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 23287357 - 23287412
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacg 271  Q
    ||||||||||||||| |||||||||| |||||| ||||||||||  ||||||||||    
T  23287357 acacatataattatattgaattatgtcattttcctaaattattattggtgtcgacg 23287412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 298
Target Start/End: Complemental strand, 17123111 - 17123017
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttcatgttatgtctgatgt 298  Q
    ||||| ||||| ||| |||||||| || |  ||||||||||||||| ||||||||| |||||| | ||  ||||||| ||||||||||| |||||    
T  17123111 tgtccaacaccgacatatataattgtacttgattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccatgttatgtccgatgt 17123017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 18592132 - 18592054
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttcatgt 286  Q
    |||||||  |||||||||||| | |||||||||| ||||||||||| ||||| |||||||| |  ||||||||| ||||    
T  18592132 cgacaccggcacatataattacattgaattatgtaattttcttaaaatattagcggtgtcggcatatcagtgtttatgt 18592054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 270
Target Start/End: Complemental strand, 28296387 - 28296325
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgac 270  Q
    |||||||||||||||| | || | |||||||||| ||||||| ||||||||| ||||||||||    
T  28296387 cgacaccaacacatatgagtacattgaattatgtcattttctcaaattattatcggtgtcgac 28296325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 271
Target Start/End: Complemental strand, 28862363 - 28862301
Alignment:
Q  209 gacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacg 271  Q
    ||||||||||||| |||||||| | |||||| |||||||||| ||||||||| ||| ||||||    
T  28862363 gacaccaacacatgtaattatactaaattatatgattttcttcaattattaatggtatcgacg 28862301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 7175027 - 7175080
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcga 269  Q
    ||||||||||||||    |||||||||||||||| |||||||||||||||||||    
T  7175027 acacatataattatgccaaattatgtgattttctcaaattattaacggtgtcga 7175080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 16203786 - 16203855
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| ||||||||||| ||||||||||||| | | ||||||| |||||||| ||||||||| | ||||||    
T  16203786 tgtcttgtccgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcg 16203855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 298
Target Start/End: Original strand, 15410450 - 15410538
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttcatgttatgtctgatgt 298  Q
    |||||||||||||| |||| | ||||| || | ||||||||||||||||| |||||||| ||  ||||||| | |||  ||||||||||    
T  15410450 acaccaacacatatgattacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtctgatgt 15410538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 32766943 - 32767003
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||| |||||||||||||| | |||||| || |||||||| ||||||||| ||||||||    
T  32766943 cgacacaaacacatataattacattgaattgtgcgattttctcaaattattagcggtgtcg 32767003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 264
Target Start/End: Complemental strand, 30098372 - 30098329
Alignment:
Q  221 tataattatagtgaattatgtgattttcttaaattattaacggt 264  Q
    |||||||| | |||||||||||||||||| ||||||||||||||    
T  30098372 tataattacattgaattatgtgattttctcaaattattaacggt 30098329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 271
Target Start/End: Complemental strand, 39205939 - 39205876
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacg 271  Q
    ||||||||||||||||||||| |   |||||| ||||||||| ||||||||| | |||||||||    
T  39205939 cgacaccaacacatataattacacctaattatatgattttctcaaattattagcagtgtcgacg 39205876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 18421832 - 18421890
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattat 257  Q
    |||| |||||||| || ||||||||||||| | || ||||||||||||||| |||||||    
T  18421832 tgtcgtgtccgacgccgacacatataattacactggattatgtgattttctcaaattat 18421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 24273039 - 24273089
Alignment:
Q  217 cacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    |||||||||||| | |||||||||||||||||| |||||| |||| |||||    
T  24273039 cacatataattacactgaattatgtgattttctcaaattaataactgtgtc 24273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 24389175 - 24389125
Alignment:
Q  217 cacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    |||||||||||| | |||||||||||||||||| |||||| |||| |||||    
T  24389175 cacatataattacactgaattatgtgattttctcaaattaataactgtgtc 24389125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 27932308 - 27932234
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| |||| ||||||||||||| |  | |||||| | |||||||||| ||||||| ||||||||| ||||||||    
T  27932308 acacgtgtcgtgtccgacaccaagatttgtaattacactgaattatgtaattttctcaaattattagcggtgtcg 27932234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 266
Target Start/End: Complemental strand, 36838602 - 36838544
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    ||||||| ||||||||||||| | | |||||||| ||||||| ||||||||| ||||||    
T  36838602 cgacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 42029820 - 42029770
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttct 249  Q
    |||| ||||||||||| | ||||||||||| | ||||||||||||||||||    
T  42029820 tgtcgtgtccgacaccgatacatataattacattgaattatgtgattttct 42029770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 32630733 - 32630794
Alignment:
Q  206 tccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    ||||||||  ||||||||||||| | |||||||| | ||||||| ||||||||| |||||||    
T  32630733 tccgacactgacacatataattacattgaattatataattttctcaaattattatcggtgtc 32630794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 3751937 - 3751981
Alignment:
Q  215 aacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||||||||||||||| | | |||||||||||||| |||||||||    
T  3751937 aacacatataattatacttagttatgtgattttctcaaattatta 3751981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 11685998 - 11685938
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||| ||||||||||||| | | ||||||| || ||||| ||||||||| ||||||||    
T  11685998 cgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcg 11685938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 268
Target Start/End: Original strand, 21191052 - 21191116
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||| |||| | |||||| | |||||||||||||||| | ||||||||| | ||||||    
T  21191052 tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcg 21191116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 282
Target Start/End: Original strand, 21576731 - 21576819
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttc 282  Q
    |||| |||| ||||||||| | |||| | |||||| | |||||||||||||||| | ||||||||| | |||| | || ||||||||||    
T  21576731 acacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgttggcgtatcagtgttc 21576819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 23012399 - 23012459
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||| ||||| ||||| ||||||||||||| | | |||||| ||||||||| |||||||||    
T  23012399 tgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattatta 23012459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 27144514 - 27144462
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||||| | | ||||||||||||| || ||||||||| ||||||||    
T  27144514 acacatataattacactaaattatgtgatttcctcaaattattagcggtgtcg 27144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 1712 - 1643
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| ||||||||||| |||| ||||||||||   |||||| ||||||||| ||||||||||||||||||    
T  1712 tgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcg 1643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 70351 - 70275
Alignment:
Q  194 acacttgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgac 270  Q
    |||| |||| ||||||||||| |||| |||||||| | |||||||||| ||||| | ||||||||||| ||||||||    
T  70351 acacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtcgac 70275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 5367260 - 5367200
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||| ||||||||||| ||||||||||||| | ||||||||||||||| || |||||||||    
T  5367260 tgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattatta 5367200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 21616813 - 21616761
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||||| | |||||||||||||||||| ||||||||| ||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcg 21616761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 31808128 - 31808076
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||||| | |||||||||||||||| ||||||||||| ||||||||    
T  31808128 acacatataattacactgaattatgtgattttgttaaattattagcggtgtcg 31808076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 18622665 - 18622614
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||||||||||| |||||||| | |||||||||||||||| |||||||||||    
T  18622665 cgacaccaacacgtataattacactgaattatgtgattttattaaattatta 18622614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 205 - 280
Target Start/End: Complemental strand, 31026757 - 31026682
Alignment:
Q  205 gtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgt 280  Q
    |||||||||| ||| |||| |||| | |||||||||| ||||||||||||||||| |||| |||||| ||| ||||    
T  31026757 gtccgacaccgacatatatgattacattgaattatgtcattttcttaaattattatcggtctcgacgtatccgtgt 31026682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 267
Target Start/End: Complemental strand, 44860379 - 44860320
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    ||||||| ||||||||||||| | ||||||||| |||||||| ||||||||| |||||||    
T  44860379 cgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 23718087 - 23718025
Alignment:
Q  206 tccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| |||| ||||||||||||| | |||||||||||| ||||| ||||||||| ||||||||    
T  23718087 tccgtcaccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcg 23718025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 270
Target Start/End: Complemental strand, 23921316 - 23921250
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgac 270  Q
    ||||||||||||| |  |||||||| | |||||||||| ||||||| |||||||||||||| |||||    
T  23921316 tgtccgacaccaatatttataattacactgaattatgtaattttctcaaattattaacggtatcgac 23921250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 24105759 - 24105697
Alignment:
Q  206 tccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| |||| ||||||||||||| | |||||||||||| ||||| ||||||||| ||||||||    
T  24105759 tccgtcaccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcg 24105697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 204 - 249
Target Start/End: Original strand, 20242723 - 20242768
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttct 249  Q
    ||||||||||| ||||||||||||| | ||||||||||||||||||    
T  20242723 tgtccgacaccgacacatataattacactgaattatgtgattttct 20242768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 17077012 - 17077071
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||| |||||||||||  ||||||| | ||||| ||||||||||||||||||||    
T  17077012 cgacaccaacatatataattatatcgaattatataatttt-ttaaattattaacggtgtcg 17077071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 34691801 - 34691861
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggt 264  Q
    ||||||||||| ||||||||||||| | |||||||| ||||||| | ||||||||| ||||    
T  34691801 tgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 34714213 - 34714273
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggt 264  Q
    ||||||||||| ||||||||||||| | |||||||| ||||||| | ||||||||| ||||    
T  34714213 tgtccgacaccgacacatataattacactgaattatatgattttatcaaattattagcggt 34714273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 37411252 - 37411304
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||| | | |||||||||||||||||| ||||||||| ||||||||    
T  37411252 acacatataatcacactgaattatgtgattttctcaaattattagcggtgtcg 37411304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 39279732 - 39279676
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    ||||| ||||||||||||| | |||||||| ||||||||| | ||||||||||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttctcatattattaacggtgt 39279676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 268
Target Start/End: Original strand, 16069263 - 16069314
Alignment:
Q  217 cacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| ||||||| | |||||||| ||||||| ||||||||||||||||||||    
T  16069263 cacaaataattacactgaattatatgatttttttaaattattaacggtgtcg 16069314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 268
Target Start/End: Complemental strand, 19574024 - 19573977
Alignment:
Q  221 tataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||||| | |||||||||| ||||||||||||||||| ||||||||    
T  19574024 tataattacactgaattatgttattttcttaaattattatcggtgtcg 19573977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 38442366 - 38442315
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||| |||| |||||||||| |||||||||||||||| |||||| ||||    
T  38442366 cgacaccgacacttataattatattgaattatgtgatttttttaaatcatta 38442315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 28677958 - 28677908
Alignment:
Q  218 acatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||| | |||||||||||||||| | ||||||||| ||||||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattattagcggtgtcg 28677908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 31018653 - 31018591
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    ||||||||||| |||| |||||||| | | ||| |||||||||||| ||||||||| ||||||    
T  31018653 tgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgt 31018591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 35449564 - 35449514
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    ||||||||||||| | |||||| ||||||||||| ||||||||||| ||||    
T  35449564 acacatataattacactgaattctgtgattttctcaaattattaacagtgt 35449514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 28412395 - 28412346
Alignment:
Q  222 ataattatagtgaattatgtgattttcttaaattattaacggtgtcgacg 271  Q
    ||||||| | |||||||||||||||| | |||||||||||||||| ||||    
T  28412395 ataattacactgaattatgtgattttatcaaattattaacggtgttgacg 28412346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 268
Target Start/End: Original strand, 30404841 - 30404910
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||| |||||||| || |||| | |||||| | |||||||||||||||| | ||||||||||| ||||||    
T  30404841 tgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcg 30404910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 41942152 - 41942107
Alignment:
Q  220 atataattatagtgaattatgtgattttcttaaattattaacggtg 265  Q
    ||||||||||| |||||||||| ||||||| ||||| |||||||||    
T  41942152 atataattatactgaattatgtaattttctcaaatttttaacggtg 41942107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 2438710 - 2438770
Alignment:
Q  199 tgtcatgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    |||| ||||||||||| |||| | |||||| | |||||||||||||||| | |||||||||    
T  2438710 tgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaaattatta 2438770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 17087940 - 17087999
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||||||| ||||||||| |  ||||||| | ||||| ||||||||||||||||||||    
T  17087940 cgacaccaacatatataattacatcgaattatataatttt-ttaaattattaacggtgtcg 17087999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 28121551 - 28121607
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    ||||||||||||||||||| | ||| |||||  ||||||| |||||||||| |||||    
T  28121551 acaccaacacatataattacattgatttatgccattttctcaaattattaatggtgt 28121607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 30298445 - 30298510
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacg 271  Q
    ||||||||||| ||||||   |||| | |||||||||| ||||| ||||||||||| |||||||||||    
T  30298445 tgtccgacaccgacacatg--attacactgaattatgtcattttattaaattattatcggtgtcgacg 30298510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 8725 - 8647
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgttcatgt 286  Q
    ||||||| |||| |||||||||| |||| |||||||||||| ||||||||||   |||||||||  ||||||| |||||    
T  8725 cgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagtgtccatgt 8647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 7028 - 7104
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgt 280  Q
    ||||||||||| |||| | |||||||| | |||||||| ||||| | ||||||||| | ||||||||| ||||||||    
T  7028 tgtccgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcgacgtatcagtgt 7104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 17038 - 17094
Alignment:
Q  210 acaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgt 266  Q
    ||||||||||||||||||| | ||| |||||  ||||||| ||||||||||||||||    
T  17038 acaccaacacatataattacattgatttatgccattttctcaaattattaacggtgt 17094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 268
Target Start/End: Original strand, 135312 - 135372
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    ||||||| ||||||||||||| |  ||||||||||||||||| ||||||||| | ||||||    
T  135312 cgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcg 135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 137839 - 137789
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattatt 258  Q
    |||||||||||||||| | || | |||||| ||||||||||||||||||||    
T  137839 cgacaccaacacatatgactacactgaattgtgtgattttcttaaattatt 137789  T

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Target: scaffold0168 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 21094 - 21043
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    |||||||||||||||  || |||||||||||||| ||||||||||| |||||    
T  21094 acacatataattataccgacttatgtgattttctcaaattattaaccgtgtc 21043  T

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Target: scaffold0123 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 44533 - 44584
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtgtc 267  Q
    ||||||||||||| | |||||||||||||||||| ||||| ||| |||||||    
T  44533 acacatataattacactgaattatgtgattttctcaaatttttagcggtgtc 44584  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 9747 - 9798
Alignment:
Q  208 cgacaccaacacatataattatagtgaattatgtgattttcttaaattatta 259  Q
    ||||||| ||||||||||||| | ||||||| |||||||||| |||||||||    
T  9747 cgacaccgacacatataattacactgaattaagtgattttctcaaattatta 9798  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 3864 - 3909
Alignment:
Q  223 taattatagtgaattatgtgattttcttaaattattaacggtgtcg 268  Q
    |||||| | |||||||||||||||| ||||||||||||| ||||||    
T  3864 taattacactgaattatgtgatttttttaaattattaaccgtgtcg 3909  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 68250 - 68299
Alignment:
Q  216 acacatataattatagtgaattatgtgattttcttaaattattaacggtg 265  Q
    |||| |||||||||| | |||||| ||||||||| |||||||||||||||    
T  68250 acacctataattatactaaattatatgattttctcaaattattaacggtg 68299  T

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Target: scaffold0652 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 458 - 534
Alignment:
Q  204 tgtccgacaccaacacatataattatagtgaattatgtgattttcttaaattattaacggtgtcgacgaatcagtgt 280  Q
    ||||||||||| |||| | |||||| | |||||| ||||||||| | ||||||||| | |||||| || ||||||||    
T  458 tgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgt 534  T

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