View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17831_low_1 (Length: 790)

Name: NF17831_low_1
Description: NF17831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17831_low_1
NF17831_low_1
[»] chr3 (59 HSPs)
chr3 (16-620)||(29231201-29231804)
chr3 (601-771)||(24097925-24098094)
chr3 (660-768)||(29231026-29231134)
chr3 (658-771)||(10820408-10820521)
chr3 (658-771)||(11218245-11218358)
chr3 (629-767)||(29777293-29777430)
chr3 (629-768)||(33623132-33623270)
chr3 (629-768)||(43122780-43122918)
chr3 (629-771)||(26997383-26997524)
chr3 (629-771)||(48517961-48518101)
chr3 (658-771)||(17579762-17579875)
chr3 (658-758)||(33623283-33623383)
chr3 (629-771)||(13712081-13712222)
chr3 (629-771)||(17579980-17580121)
chr3 (623-758)||(13712232-13712366)
chr3 (658-771)||(1771937-1772050)
chr3 (659-765)||(8112790-8112896)
chr3 (629-771)||(31324165-31324306)
chr3 (658-758)||(11871472-11871572)
chr3 (658-758)||(29777444-29777544)
chr3 (658-758)||(43122668-43122767)
chr3 (629-769)||(52211910-52212049)
chr3 (678-769)||(3750858-3750949)
chr3 (629-771)||(13657944-13658086)
chr3 (629-758)||(10820270-10820398)
chr3 (624-758)||(13658096-13658229)
chr3 (657-771)||(48518229-48518343)
chr3 (629-771)||(54923997-54924138)
chr3 (669-758)||(11218146-11218235)
chr3 (658-751)||(13712299-13712392)
chr3 (629-758)||(24098104-24098232)
chr3 (670-771)||(25147387-25147488)
chr3 (623-716)||(26997240-26997332)
chr3 (703-771)||(1771742-1771810)
chr3 (658-758)||(7515476-7515576)
chr3 (658-771)||(3750615-3750729)
chr3 (629-739)||(47220432-47220541)
chr3 (657-771)||(48381911-48382024)
chr3 (658-751)||(24098171-24098264)
chr3 (670-751)||(26997463-26997544)
chr3 (658-765)||(50293753-50293860)
chr3 (658-716)||(11218079-11218137)
chr3 (658-716)||(11871606-11871664)
chr3 (658-751)||(7515416-7515509)
chr3 (658-751)||(11218356-11218449)
chr3 (658-751)||(11871412-11871505)
chr3 (658-751)||(13657912-13658005)
chr3 (670-751)||(13658163-13658244)
chr3 (739-771)||(11871582-11871614)
chr3 (680-763)||(43389913-43389996)
chr3 (724-771)||(48382153-48382200)
chr3 (660-751)||(48517931-48518022)
chr3 (658-712)||(10820238-10820292)
chr3 (659-721)||(37148194-37148256)
chr3 (629-698)||(11218349-11218417)
chr3 (670-751)||(29777273-29777354)
chr3 (658-751)||(33623350-33623443)
chr3 (658-751)||(47220244-47220337)
chr3 (660-721)||(50293857-50293918)
[»] chr4 (73 HSPs)
chr4 (629-771)||(35778897-35779038)
chr4 (629-769)||(53856518-53856657)
chr4 (658-771)||(14336812-14336925)
chr4 (658-758)||(25154602-25154702)
chr4 (629-771)||(32751157-32751297)
chr4 (670-771)||(13846625-13846726)
chr4 (662-771)||(18598212-18598321)
chr4 (658-771)||(41898305-41898418)
chr4 (658-758)||(14336702-14336802)
chr4 (658-769)||(25363474-25363585)
chr4 (657-771)||(6111979-6112093)
chr4 (658-771)||(15631558-15631671)
chr4 (658-771)||(23159112-23159225)
chr4 (658-771)||(40998185-40998297)
chr4 (658-771)||(40998402-40998515)
chr4 (669-769)||(25154714-25154813)
chr4 (680-771)||(29031523-29031614)
chr4 (680-771)||(29043643-29043734)
chr4 (670-771)||(15631352-15631453)
chr4 (674-763)||(52851109-52851197)
chr4 (623-758)||(32557098-32557232)
chr4 (622-758)||(41898161-41898295)
chr4 (658-758)||(13846736-13846836)
chr4 (658-758)||(13864068-13864168)
chr4 (674-758)||(20421183-20421267)
chr4 (658-761)||(32557251-32557355)
chr4 (658-770)||(40289580-40289692)
chr4 (629-758)||(46429765-46429897)
chr4 (658-751)||(21956040-21956134)
chr4 (658-771)||(13870444-13870556)
chr4 (658-771)||(14966341-14966454)
chr4 (658-771)||(18598449-18598562)
chr4 (658-751)||(18598529-18598622)
chr4 (658-767)||(21956345-21956454)
chr4 (675-771)||(21956118-21956214)
chr4 (658-754)||(27389913-27390009)
chr4 (669-769)||(34508835-34508935)
chr4 (658-769)||(14966103-14966214)
chr4 (658-721)||(20421138-20421201)
chr4 (658-721)||(34979497-34979560)
chr4 (658-712)||(32751322-32751376)
chr4 (669-747)||(53856680-53856758)
chr4 (658-751)||(14336642-14336735)
chr4 (658-751)||(14336892-14336985)
chr4 (658-751)||(20421078-20421171)
chr4 (658-771)||(29031282-29031395)
chr4 (658-771)||(29043401-29043514)
chr4 (670-747)||(32751137-32751214)
chr4 (658-751)||(32751343-32751436)
chr4 (658-771)||(52850891-52851004)
chr4 (657-749)||(3253454-3253546)
chr4 (658-758)||(6111869-6111969)
chr4 (703-771)||(7632915-7632983)
chr4 (658-758)||(50523137-50523237)
chr4 (658-716)||(5322578-5322636)
chr4 (657-751)||(7633031-7633124)
chr4 (623-721)||(34979523-34979620)
chr4 (670-744)||(41898392-41898466)
chr4 (658-751)||(5322518-5322611)
chr4 (658-751)||(7632839-7632932)
chr4 (658-751)||(15631638-15631731)
chr4 (703-768)||(25363300-25363365)
chr4 (658-751)||(26553946-26554039)
chr4 (658-751)||(35778977-35779070)
chr4 (658-715)||(41898136-41898193)
chr4 (658-751)||(53856736-53856829)
chr4 (703-771)||(35778724-35778792)
chr4 (739-771)||(50523247-50523279)
chr4 (657-721)||(55358559-55358623)
chr4 (658-717)||(26553920-26553979)
chr4 (659-758)||(27389805-27389904)
chr4 (670-751)||(32557084-32557165)
chr4 (658-747)||(41511279-41511368)
[»] chr1 (55 HSPs)
chr1 (658-771)||(1695785-1695898)
chr1 (629-769)||(1102790-1102930)
chr1 (658-771)||(48074324-48074437)
chr1 (629-771)||(18088197-18088337)
chr1 (658-757)||(4964923-4965022)
chr1 (629-771)||(29987391-29987532)
chr1 (629-758)||(41810777-41810905)
chr1 (629-761)||(4974874-4975005)
chr1 (629-768)||(4764875-4765013)
chr1 (629-751)||(20491946-20492067)
chr1 (658-751)||(15057243-15057336)
chr1 (669-771)||(39834178-39834281)
chr1 (657-771)||(29386273-29386387)
chr1 (658-751)||(20492006-20492099)
chr1 (658-771)||(41810915-41811026)
chr1 (671-771)||(18030516-18030616)
chr1 (629-771)||(45721179-45721320)
chr1 (657-771)||(49588078-49588192)
chr1 (658-771)||(15615269-15615382)
chr1 (657-758)||(15615392-15615493)
chr1 (658-751)||(39834008-39834101)
chr1 (658-771)||(45721446-45721559)
chr1 (658-758)||(1102678-1102778)
chr1 (658-758)||(18088087-18088187)
chr1 (658-721)||(5739392-5739455)
chr1 (623-758)||(29386128-29386263)
chr1 (623-758)||(39834034-39834168)
chr1 (658-768)||(3339128-3339237)
chr1 (658-768)||(4965036-4965146)
chr1 (629-758)||(4765026-4765154)
chr1 (658-771)||(47824481-47824592)
chr1 (658-721)||(41810745-41810808)
chr1 (629-768)||(43142663-43142801)
chr1 (658-716)||(49588340-49588399)
chr1 (689-751)||(43142881-43142943)
chr1 (658-751)||(1695725-1695818)
chr1 (657-758)||(5739477-5739578)
chr1 (658-771)||(42371407-42371520)
chr1 (658-758)||(29987281-29987381)
chr1 (658-769)||(18030271-18030381)
chr1 (629-771)||(5277342-5277483)
chr1 (658-716)||(38823705-38823763)
chr1 (658-715)||(4765129-4765186)
chr1 (670-751)||(4974854-4974935)
chr1 (669-758)||(43142814-43142903)
chr1 (703-771)||(48074130-48074198)
chr1 (688-751)||(1102869-1102932)
chr1 (658-713)||(29987221-29987276)
chr1 (658-721)||(29987501-29987564)
chr1 (670-720)||(41542702-41542752)
chr1 (670-751)||(1102630-1102711)
chr1 (658-751)||(38823730-38823823)
chr1 (658-747)||(39834263-39834352)
chr1 (658-751)||(48074404-48074496)
chr1 (718-771)||(49112936-49112989)
[»] chr8 (86 HSPs)
chr8 (657-771)||(44318395-44318509)
chr8 (658-771)||(1043715-1043828)
chr8 (629-770)||(28463854-28463994)
chr8 (658-768)||(6121828-6121938)
chr8 (657-771)||(15315286-15315400)
chr8 (657-771)||(15495655-15495769)
chr8 (658-771)||(9779002-9779115)
chr8 (658-769)||(24043808-24043919)
chr8 (629-771)||(6986-7127)
chr8 (629-771)||(4157626-4157767)
chr8 (629-771)||(9117551-9117692)
chr8 (610-754)||(7141-7285)
chr8 (623-755)||(23275352-23275483)
chr8 (658-769)||(2251028-2251139)
chr8 (658-769)||(2257071-2257182)
chr8 (669-768)||(42692026-42692125)
chr8 (669-771)||(2257312-2257414)
chr8 (658-771)||(15891648-15891761)
chr8 (629-771)||(27702513-27702654)
chr8 (629-771)||(31618615-31618757)
chr8 (658-758)||(9117702-9117802)
chr8 (658-758)||(23403826-23403926)
chr8 (658-768)||(29457195-29457306)
chr8 (624-758)||(15891771-15891904)
chr8 (629-771)||(22444861-22445002)
chr8 (658-771)||(2250785-2250898)
chr8 (658-771)||(22444621-22444734)
chr8 (670-758)||(15315188-15315276)
chr8 (670-758)||(15495557-15495645)
chr8 (657-751)||(9117518-9117612)
chr8 (629-771)||(31827068-31827208)
chr8 (658-771)||(11482593-11482705)
chr8 (658-751)||(15891838-15891931)
chr8 (658-751)||(29276637-29276730)
chr8 (658-771)||(31618374-31618487)
chr8 (658-771)||(31826850-31826963)
chr8 (658-751)||(44728126-44728219)
chr8 (658-758)||(9779125-9779225)
chr8 (658-769)||(15300841-15300952)
chr8 (658-769)||(15481210-15481321)
chr8 (688-771)||(35236771-35236854)
chr8 (629-771)||(35435498-35435638)
chr8 (670-768)||(42620485-42620583)
chr8 (629-758)||(35435360-35435488)
chr8 (658-758)||(29218421-29218521)
chr8 (688-768)||(1691934-1692016)
chr8 (629-766)||(38507111-38507248)
chr8 (688-758)||(42691943-42692013)
chr8 (623-758)||(4157777-4157907)
chr8 (658-751)||(23275416-23275509)
chr8 (623-751)||(23403731-23403859)
chr8 (658-751)||(27702593-27702686)
chr8 (658-751)||(29218361-29218454)
chr8 (658-771)||(29276796-29276909)
chr8 (658-731)||(29276896-29276969)
chr8 (658-751)||(38507079-38507172)
chr8 (629-741)||(24469414-24469524)
chr8 (658-758)||(27702403-27702503)
chr8 (724-771)||(11482419-11482466)
chr8 (658-768)||(15300598-15300709)
chr8 (658-768)||(15480967-15481078)
chr8 (658-721)||(31827177-31827240)
chr8 (658-716)||(22780077-22780135)
chr8 (623-721)||(29276663-29276760)
chr8 (689-771)||(42620693-42620775)
chr8 (658-768)||(44728365-44728475)
chr8 (671-772)||(1692146-1692247)
chr8 (658-751)||(4157594-4157687)
chr8 (658-751)||(9117769-9117862)
chr8 (658-751)||(15315117-15315209)
chr8 (658-751)||(15495486-15495578)
chr8 (658-751)||(15891588-15891681)
chr8 (658-751)||(23403705-23403798)
chr8 (658-751)||(24043748-24043841)
chr8 (670-751)||(24469463-24469544)
chr8 (658-751)||(35435577-35435670)
chr8 (669-721)||(23404045-23404097)
chr8 (660-716)||(31618731-31618787)
chr8 (658-721)||(6954-7017)
chr8 (658-712)||(28463822-28463876)
chr8 (674-716)||(38507274-38507316)
chr8 (629-758)||(1043838-1043965)
chr8 (658-751)||(1043904-1043997)
chr8 (658-715)||(6121524-6121581)
chr8 (658-751)||(23404075-23404168)
chr8 (658-715)||(29457135-29457192)
[»] chr7 (62 HSPs)
chr7 (669-771)||(45443263-45443365)
chr7 (629-770)||(29036174-29036315)
chr7 (658-770)||(9907661-9907773)
chr7 (658-771)||(6723382-6723495)
chr7 (687-771)||(35127543-35127627)
chr7 (629-771)||(42430544-42430686)
chr7 (658-771)||(3173300-3173413)
chr7 (658-771)||(22563782-22563895)
chr7 (658-771)||(42759019-42759132)
chr7 (629-771)||(44941047-44941188)
chr7 (658-771)||(18942483-18942596)
chr7 (629-758)||(42759142-42759270)
chr7 (629-769)||(48840166-48840305)
chr7 (658-771)||(37043235-37043347)
chr7 (658-771)||(45203645-45203758)
chr7 (658-771)||(45324816-45324929)
chr7 (674-770)||(3173540-3173636)
chr7 (623-758)||(22642041-22642175)
chr7 (658-758)||(44449193-44449292)
chr7 (658-758)||(45443375-45443475)
chr7 (657-760)||(18808100-18808203)
chr7 (623-758)||(22563905-22564039)
chr7 (658-769)||(45324577-45324687)
chr7 (679-769)||(36986957-36987046)
chr7 (629-771)||(47193424-47193565)
chr7 (629-758)||(8919539-8919667)
chr7 (658-751)||(22563972-22564065)
chr7 (690-771)||(22641950-22642031)
chr7 (629-758)||(30648253-30648381)
chr7 (658-771)||(37042994-37043107)
chr7 (658-751)||(42430625-42430718)
chr7 (658-758)||(9907552-9907650)
chr7 (703-771)||(10470794-10470862)
chr7 (657-716)||(35127739-35127798)
chr7 (629-751)||(9907740-9907861)
chr7 (658-771)||(41718301-41718415)
chr7 (658-751)||(3173240-3173333)
chr7 (658-751)||(10097024-10097115)
chr7 (658-751)||(18942313-18942406)
chr7 (669-758)||(18942384-18942473)
chr7 (658-751)||(18942563-18942656)
chr7 (670-771)||(37393635-37393736)
chr7 (658-751)||(48840244-48840337)
chr7 (657-721)||(22642138-22642202)
chr7 (658-769)||(37393395-37393506)
chr7 (688-771)||(45909863-45909946)
chr7 (669-758)||(45203768-45203857)
chr7 (658-715)||(48840026-48840082)
chr7 (623-758)||(29036326-29036459)
chr7 (688-747)||(8919537-8919596)
chr7 (658-721)||(9907492-9907555)
chr7 (658-721)||(10096964-10097027)
chr7 (669-716)||(10470595-10470642)
chr7 (657-751)||(9907800-9907894)
chr7 (658-716)||(29036427-29036485)
chr7 (658-712)||(44449075-44449129)
chr7 (729-771)||(47332454-47332496)
chr7 (658-751)||(6723462-6723555)
chr7 (670-751)||(10470537-10470617)
chr7 (658-751)||(39304988-39305081)
chr7 (658-747)||(42758959-42759048)
chr7 (670-751)||(44449027-44449108)
[»] chr2 (74 HSPs)
chr2 (629-771)||(43671370-43671511)
chr2 (629-770)||(35125498-35125638)
chr2 (623-769)||(28182315-28182459)
chr2 (629-771)||(4603663-4603804)
chr2 (629-771)||(34334579-34334720)
chr2 (670-770)||(29683606-29683706)
chr2 (629-771)||(45638247-45638388)
chr2 (658-771)||(30851079-30851192)
chr2 (629-768)||(33615929-33616067)
chr2 (674-771)||(7438323-7438420)
chr2 (658-771)||(33953391-33953504)
chr2 (659-771)||(28238450-28238562)
chr2 (658-758)||(43671260-43671360)
chr2 (629-768)||(5482921-5483059)
chr2 (629-771)||(30513000-30513141)
chr2 (629-758)||(28182174-28182303)
chr2 (688-769)||(28238691-28238772)
chr2 (674-771)||(44436481-44436577)
chr2 (622-758)||(5248154-5248289)
chr2 (658-758)||(7438430-7438530)
chr2 (674-758)||(35125404-35125488)
chr2 (658-769)||(1038949-1039060)
chr2 (670-769)||(43865382-43865481)
chr2 (658-768)||(33953171-33953281)
chr2 (658-771)||(30823615-30823728)
chr2 (658-758)||(1039072-1039172)
chr2 (658-758)||(28582459-28582559)
chr2 (674-760)||(5248066-5248152)
chr2 (669-755)||(11974094-11974180)
chr2 (669-771)||(30823409-30823511)
chr2 (658-771)||(15285811-15285924)
chr2 (658-751)||(33615756-33615849)
chr2 (669-758)||(44436587-44436676)
chr2 (658-751)||(45638077-45638170)
chr2 (703-771)||(9143958-9144026)
chr2 (658-721)||(30851296-30851360)
chr2 (658-758)||(45638137-45638237)
chr2 (658-721)||(5247992-5248055)
chr2 (657-771)||(36387278-36387393)
chr2 (658-751)||(4603743-4603836)
chr2 (658-751)||(5483139-5483232)
chr2 (658-751)||(11973937-11974030)
chr2 (658-751)||(11974158-11974251)
chr2 (658-751)||(28182392-28182485)
chr2 (658-751)||(34334547-34334640)
chr2 (703-771)||(11974013-11974081)
chr2 (658-721)||(30513187-30513250)
chr2 (623-758)||(34334730-34334864)
chr2 (705-771)||(28582569-28582635)
chr2 (658-716)||(40343729-40343787)
chr2 (674-751)||(4603509-4603586)
chr2 (658-715)||(5482889-5482946)
chr2 (658-771)||(7881634-7881747)
chr2 (658-771)||(15286052-15286165)
chr2 (629-769)||(15786913-15787050)
chr2 (658-751)||(28582399-28582492)
chr2 (703-768)||(29683843-29683908)
chr2 (670-758)||(36387403-36387492)
chr2 (658-726)||(4603464-4603532)
chr2 (658-758)||(4603553-4603653)
chr2 (671-751)||(33953471-33953551)
chr2 (658-758)||(42553627-42553726)
chr2 (658-749)||(1844500-1844591)
chr2 (658-721)||(35125359-35125422)
chr2 (689-768)||(40343560-40343639)
chr2 (658-721)||(45638357-45638420)
chr2 (658-751)||(1039139-1039232)
chr2 (658-751)||(5247932-5248025)
chr2 (658-751)||(28182143-28182235)
chr2 (670-751)||(30512980-30513061)
chr2 (658-715)||(33616042-33616099)
chr2 (629-713)||(40343673-40343755)
chr2 (658-751)||(40343754-40343847)
chr2 (658-751)||(42553694-42553786)
[»] chr6 (14 HSPs)
chr6 (658-771)||(24012484-24012597)
chr6 (674-771)||(4799504-4799601)
chr6 (629-762)||(29134959-29135091)
chr6 (658-771)||(7858641-7858754)
chr6 (629-758)||(5985825-5985953)
chr6 (658-771)||(7675581-7675694)
chr6 (629-758)||(4799366-4799494)
chr6 (658-755)||(33040927-33041026)
chr6 (692-762)||(4997912-4997982)
chr6 (658-751)||(5985793-5985886)
chr6 (658-721)||(14942268-14942331)
chr6 (658-721)||(33041023-33041086)
chr6 (658-744)||(9049760-9049846)
chr6 (669-721)||(14942339-14942391)
[»] chr5 (52 HSPs)
chr5 (629-771)||(42092140-42092281)
chr5 (658-771)||(27318929-27319042)
chr5 (658-771)||(39805012-39805125)
chr5 (658-771)||(6641872-6641985)
chr5 (623-756)||(30004041-30004173)
chr5 (624-758)||(2803044-2803177)
chr5 (658-771)||(1737499-1737612)
chr5 (658-771)||(8942882-8942995)
chr5 (623-771)||(27495924-27496069)
chr5 (658-771)||(28574648-28574761)
chr5 (658-758)||(27496079-27496179)
chr5 (658-758)||(39805135-39805235)
chr5 (623-758)||(2796883-2797017)
chr5 (623-758)||(6641995-6642129)
chr5 (658-771)||(18008435-18008548)
chr5 (670-771)||(42375508-42375609)
chr5 (658-769)||(18008194-18008305)
chr5 (629-747)||(2796763-2796880)
chr5 (658-751)||(42092012-42092105)
chr5 (658-769)||(21250274-21250385)
chr5 (629-747)||(2802924-2803041)
chr5 (670-760)||(5361480-5361570)
chr5 (658-751)||(1069126-1069218)
chr5 (658-771)||(42375737-42375850)
chr5 (629-769)||(21250517-21250656)
chr5 (703-771)||(40807897-40807965)
chr5 (658-769)||(38085308-38085419)
chr5 (670-751)||(6642062-6642143)
chr5 (658-747)||(27319013-27319102)
chr5 (658-751)||(39804952-39805045)
chr5 (658-721)||(21250625-21250688)
chr5 (658-721)||(27495898-27495961)
chr5 (661-751)||(1069276-1069366)
chr5 (658-708)||(2803154-2803204)
chr5 (629-771)||(8943123-8943264)
chr5 (670-720)||(27318862-27318912)
chr5 (658-743)||(20429681-20429766)
chr5 (658-767)||(28571056-28571164)
chr5 (670-751)||(40807948-40808029)
chr5 (658-747)||(42092224-42092313)
chr5 (703-771)||(1069201-1069269)
chr5 (658-721)||(2796731-2796794)
chr5 (660-743)||(30004017-30004100)
chr5 (703-758)||(40807832-40807887)
chr5 (658-713)||(42375436-42375491)
chr5 (658-708)||(2796993-2797043)
chr5 (659-721)||(6641813-6641875)
chr5 (670-708)||(35171718-35171756)
chr5 (658-691)||(1069216-1069249)
chr5 (658-751)||(2802892-2802985)
chr5 (670-715)||(8943239-8943284)
chr5 (670-747)||(40807768-40807845)
[»] scaffold0121 (4 HSPs)
scaffold0121 (629-771)||(23703-23844)
scaffold0121 (662-758)||(23854-23950)
scaffold0121 (658-751)||(23921-24014)
scaffold0121 (658-751)||(23671-23764)
[»] scaffold0016 (2 HSPs)
scaffold0016 (658-771)||(202357-202470)
scaffold0016 (658-758)||(202480-202580)
[»] scaffold0220 (2 HSPs)
scaffold0220 (629-771)||(21962-22103)
scaffold0220 (658-721)||(21832-21895)
[»] scaffold0051 (2 HSPs)
scaffold0051 (629-758)||(60523-60651)
scaffold0051 (658-721)||(60491-60554)
[»] scaffold0179 (3 HSPs)
scaffold0179 (658-758)||(32255-32355)
scaffold0179 (670-747)||(32419-32495)
scaffold0179 (629-683)||(32423-32476)
[»] scaffold0182 (3 HSPs)
scaffold0182 (658-758)||(22368-22468)
scaffold0182 (657-713)||(22473-22529)
scaffold0182 (658-751)||(23395-23488)
[»] scaffold0062 (2 HSPs)
scaffold0062 (658-721)||(11733-11796)
scaffold0062 (658-743)||(11793-11878)


Alignment Details
Target: chr3 (Bit Score: 569; Significance: 0; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 569; E-Value: 0
Query Start/End: Original strand, 16 - 620
Target Start/End: Complemental strand, 29231804 - 29231201
Alignment:
Q  16 aatatattgcctgtaattgattactgtttgttaaataaatgttcatttcacagtttaatcaaatattttagtcctgccacttctttgtcctatgaatttg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  29231804 aatatattgcctgtaattgattactgtttgttaaataaatgttcatttcacagtttaatcaactattttagtcctgccacttctttgtcctatgaattcg 29231705  T
Q  116 agttatactaatttccagctttgactcactcagtactagctattaggtacctacttcaatggttttccctcacctataaactctcgagctatttggaaat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29231704 agttatactaatttccagctttgactcactcagtactagctattaggtacctacttcaatggttttccctcacctataaactctcgagctatttggaaat 29231605  T
Q  216 tcccatgcatagtgatgagtgaatcacccataaacccttaattttcccttcatatatagtgacatgatggagaatctgtctcattgctcaaaatcatcac 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29231604 tcccatgcatagtgatgagtgaatcacccataaacccttaattttcccttcatatatagtgacatgatggagaatctgtctcattgctcaaaatcatcac 29231505  T
Q  316 ttgcatgggaaaatcccaattgatgtttgcctactcccactgtcgtcaaacatgtagctaagttggtcaacattaatttgctagggctttttcccaagaa 415  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29231504 ttgcatgggaaaatcccaattgatg-ttgcgtactcccactgtcgtcaaacatgtagctaagttggtcaacattaatttgctagggctttttcccaagaa 29231406  T
Q  416 agaagggaaaatggtcaaactttgaaggcatggtaattatttgccctagataactttatcactggtcactagtacgtttcttatgtaaaaattagtgact 515  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29231405 agaagggaaaatggtcaaactttgaaggcatggtaattatttgccctagataactttatcactgctcactagtacgtttcttatgtaaaaattagtgact 29231306  T
Q  516 taatttttcaaaaataaatttagatcataaaaaattaatgcacatagaaattatttttcttagataaaattgatggcagtaattatttttaagccaaata 615  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  29231305 taatttttcaaaaataaatttagatcataaaaaattaatgcacatagaaattatttttcttagattaaattgatggcagtaattatttttaggccaaata 29231206  T
Q  616 tctcc 620  Q
     ||||    
T  29231205 actcc 29231201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 601 - 771
Target Start/End: Original strand, 24097925 - 24098094
Alignment:
Q  601 tttttaagccaaatatctccggggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttcta 700  Q
    |||||| ||||||||||||| |||||| ||||||||||||||||| | ||| ||   |||||||||| ||||| |||| |||| || |||||| ||||||    
T  24097925 tttttaggccaaatatctcccgggtcctttaagtttctaaggtttcagataagt-cctttaagtttggagtttatttcggataggtcctttaagtttcta 24098023  T
Q  701 aggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    |||||||||||||||| ||||  |||| ||||| ||| | |||||||||||||||||||||||||||||||    
T  24098024 aggtttcagataggtcctttaagtttcgagtttgtttcatataggtcctttctatcaacctccgttaagcc 24098094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 660 - 768
Target Start/End: Complemental strand, 29231134 - 29231026
Alignment:
Q  660 taagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaac 759  Q
    |||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||  |||| ||||||||| |||||||| ||||||||||||    
T  29231134 taagtttgaagtttgtttcagataggttctttaagtttctaaagtttcagataggtcatttatgtttcgagtttatttcagataggttctttctatcaac 29231035  T
Q  760 ctccgttaa 768  Q
    |||||||||    
T  29231034 ctccgttaa 29231026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 10820521 - 10820408
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||||||||||||||  |||| || |||||| |||||||||||||||||| ||| ||||  |||||||||| ||| |||||||||||||||||||    
T  10820521 tttaagtttgaagtttgttttggataggtcctttaagtttctaaggtttcagataagtcctttaagtttcaagtttgtttcagataggtcctttctatca 10820422  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  10820421 acctccgttaagcc 10820408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 11218358 - 11218245
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| |||||||||||||||| || |||||| ||||||||||||||||||| || |||| ||||| ||||||||| ||||||||| |||||||||    
T  11218358 tttaagtttcaagtttgtttcagataagtcctttaagtttctaaggtttcagatagatcctttaaatttcgagtttatttcagataggtcatttctatca 11218259  T
Q  758 acctccgttaagcc 771  Q
    || |||||||||||    
T  11218258 acatccgttaagcc 11218245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 629 - 767
Target Start/End: Original strand, 29777293 - 29777430
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||| |||||||||| |||| || |||||| |||||||||||||||||||||| ||||  ||||     
T  29777293 ttaagtttctaaggtttcatataggt-cctttaagtttggagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttatgtttcg 29777391  T
Q  729 agtttattttagataggtcctttctatcaacctccgtta 767  Q
    ||||| ||| | |||||||||||||||||||||||||||    
T  29777392 agtttgtttcatataggtcctttctatcaacctccgtta 29777430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 629 - 768
Target Start/End: Original strand, 33623132 - 33623270
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||  ||||| ||||| ||||||||||  ||| || |||||| |||||||||||||||||||||| ||||  ||||     
T  33623132 ttaagtttctaaggtttcagataggtc-ttttacgtttgtagtttgtttcgaataggtcctttaagtttctaaggtttcagataggtcctttaagtttcg 33623230  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaa 768  Q
    ||||| ||| | ||||||||||||||||||||||||||||    
T  33623231 agtttgtttcatataggtcctttctatcaacctccgttaa 33623270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 629 - 768
Target Start/End: Complemental strand, 43122918 - 43122780
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||| |||||||||| |||| ||  ||||| |||||||||||||||||||||| ||||  ||||     
T  43122918 ttaagtttctaaggtttcagataagt-cctttaagtttgtagtttgtttcggataggtcatttaagtttctaaggtttcagataggtcctttaagtttcg 43122820  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaa 768  Q
    ||||| ||| | ||||||||||||||||||||||||||||    
T  43122819 agtttgtttcatataggtcctttctatcaacctccgttaa 43122780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 26997524 - 26997383
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   ||||||||||| ||||||||  |||| || |||||| |||||||||||||| ||||||||||||  |||      
T  26997524 ttaagtttctaaggtttcagataggt-cctttaagtttgatgtttgttttggataggtcctttaagtttctaaggtttcaaataggtcatttaagttttg 26997426  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| ||||| |||||||||||||||||||||||||||    
T  26997425 agtttgtttcagataagtcctttctatcaacctccgttaagcc 26997383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 629 - 771
Target Start/End: Original strand, 48517961 - 48518101
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||  |||||||||| |||| || |||||||||||||||||||||||||| || ||||  ||||     
T  48517961 ttaagtttctaaggttttagataggt-cctttaagtttcgagtttgtttcggataggtcctttaaatttctaaggtttcagatagctc-tttaagtttcg 48518058  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||    
T  48518059 agtttgtttcagataggtcatttctatcaacctccgttaagcc 48518101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 17579762 - 17579875
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||||||||| ||||||||| |||||||||||||||||||||  ||||  |||| ||||| |||  |||||||||||||| |||    
T  17579762 tttaagtttcatgtttgtttcagataggttctttaagtttctaaggtttcagataggtgctttaagtttcgagtttgtttcggataggtcctttctgtca 17579861  T
Q  758 acctccgttaagcc 771  Q
    | ||||||||||||    
T  17579862 atctccgttaagcc 17579875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 658 - 758
Target Start/End: Complemental strand, 33623383 - 33623283
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| ||||||| |||||| |||||||| ||||||||||||||||||  |||| ||||| ||| |||||||||||||||||||    
T  33623383 tttaagtttcgagtttgtttcggatatgtcctttaagtttctaagatttcagataggtcatttaagtttcgagtttgtttcagataggtcctttctatca 33623284  T
Q  758 a 758  Q
    |    
T  33623283 a 33623283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 629 - 771
Target Start/End: Original strand, 13712081 - 13712222
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    |||||||||||| |||| ||||| ||  ||| ||||| ||||||||||||  ||| || |||||| ||||||||||||||||||| || ||||  ||||     
T  13712081 ttaagtttctaaagtttcaaataggtccttt-aagttggaagtttgtttcgaataggtcctttaagtttctaaggtttcagatagatcctttaagtttcg 13712179  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| |||||||||||||||||| |||||| |||||||    
T  13712180 agtttgtttcagataggtcctttctatcgacctcctttaagcc 13712222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 17580121 - 17579980
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||  ||||||||||  ||||| |||| ||||  |||||||| |||||||||||||||||||||| ||||  ||||     
T  17580121 ttaagtttctaaggttttagataagtt-ttttaagtttcgagtttatttcggatagattctttaagtttctaaggtttcagataggtcctttaagtttcg 17580023  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| ||||||||| ||| ||| |||||||||||||||    
T  17580022 agtttgtttcagataggtcatttttattaacctccgttaagcc 17579980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 623 - 758
Target Start/End: Complemental strand, 13712366 - 13712232
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttag 722  Q
    ||||| ||||||||||||||||| | ||| ||   |||||||||  |||||||||| |||| || |||||| ||| |||||||||||||||||| ||||     
T  13712366 ggtcctttaagtttctaaggtttcagataggt-tctttaagtttcgagtttgtttcggataggtcctttaagtttttaaggtttcagataggtcctttaa 13712268  T
Q  723 atttcaagtttattttagataggtcctttctatcaa 758  Q
     |||| ||||| ||| ||||||||||||||||||||    
T  13712267 gtttcgagtttgtttcagataggtcctttctatcaa 13712232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 1772050 - 1771937
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattt-tagataggtcctttctatc 756  Q
    ||||||||| | |||||||||| ||| || |||||| |||||||||||||||||| ||| ||||  |||||||||| |||  ||||||||||||||| ||    
T  1772050 tttaagtttcacgtttgtttcatataggtcctttaagtttctaaggtttcagata-gtcctttaagtttcaagtttgtttcaagataggtcctttctgtc 1771952  T
Q  757 aacctccgttaagcc 771  Q
    |||||||||||||||    
T  1771951 aacctccgttaagcc 1771937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 659 - 765
Target Start/End: Complemental strand, 8112896 - 8112790
Alignment:
Q  659 ttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaa 758  Q
    |||||||| | |||||||| ||||| || ||||||||||||||||||||||||| ||| || |  |||| ||||| |||| |||||||||||||| ||||    
T  8112896 ttaagtttcacgtttgttttagataggtcctttaaatttctaaggtttcagataagtccttaaagtttcgagtttgttttggataggtcctttctgtcaa 8112797  T
Q  759 cctccgt 765  Q
    |||||||    
T  8112796 cctccgt 8112790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 629 - 771
Target Start/End: Original strand, 31324165 - 31324306
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| || |||| ||||||   ||||||||| |||| || |||||| |||||||||||||||||||||| ||||  ||||     
T  31324165 ttaagtttctaaggttttagataggtcattt-aagttttgggtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcg 31324263  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| |||||||||||||| |  |||||| ||||||||    
T  31324264 agtttgtttcagataggtcctttcgaaaaacctctgttaagcc 31324306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 11871472 - 11871572
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  ||||||||||  ||| || |||||| |||||||||||||||||||||| ||||  |||| ||||| ||||||||||||| |||||||||    
T  11871472 tttaagtttcgagtttgtttcgtataggtcctttaagtttctaaggtttcagataggtcttttaagtttcgagtttgttttagataggtcatttctatca 11871571  T
Q  758 a 758  Q
    |    
T  11871572 a 11871572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 658 - 758
Target Start/End: Complemental strand, 29777544 - 29777444
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| ||||| | |||||| |||||||||||| ||||||||||||||  |||| ||||| ||| ||||||||| |||||||||    
T  29777544 tttaagtttcgagtttgtttcggatatatcctttaagtttctaaggttttagataggtcatttaagtttcgagtttgtttcagataggtcatttctatca 29777445  T
Q  758 a 758  Q
    |    
T  29777444 a 29777444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 43122668 - 43122767
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||||||||||||| |||||||| ||||||||||||| ||||  |||| ||||| ||| ||||||||||||| |||||    
T  43122668 tttaagtttcgagtttgtttcggatatgttctttaagtttctaagatttcagataggtcctttaagtttcgagttt-tttcagataggtcctttttatca 43122766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 629 - 769
Target Start/End: Complemental strand, 52212049 - 52211910
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||  || | |||||||||  |||||||||| |||| || |||||| |||||||||||||||||||||| ||||  ||||     
T  52212049 ttaagtttctaaggtttcagatgagtca-tttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcg 52211951  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaag 769  Q
    ||||| |||  ||||| || ||||| |||||||||||||||    
T  52211950 agtttgtttcggatagatcgtttctgtcaacctccgttaag 52211910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 678 - 769
Target Start/End: Complemental strand, 3750949 - 3750858
Alignment:
Q  678 cagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaag 769  Q
    |||||| || |||||| |||||||||||||||||| ||| ||||  |||| ||||| ||| ||||||||| |||||||||||||||||||||    
T  3750949 cagataggtcctttaagtttctaaggtttcagataagtcctttaagtttcgagtttgtttcagataggtcatttctatcaacctccgttaag 3750858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 629 - 771
Target Start/End: Original strand, 13657944 - 13658086
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggt-catttagatttc 727  Q
    ||||||||||||||||| | ||| ||   |||||||||| ||||||||||||||| || |||||  ||||||||||||||||||||| | ||||  ||||    
T  13657944 ttaagtttctaaggtttcagataagt-cctttaagtttggagtttgtttcagataggtcctttaggtttctaaggtttcagataggtccttttaagtttc 13658042  T
Q  728 aagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
     ||||| ||| |||||  || |||||||||||||||||| ||||    
T  13658043 gagtttgtttcagatatctcatttctatcaacctccgtttagcc 13658086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 629 - 758
Target Start/End: Original strand, 10820270 - 10820398
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||||||  ||| ||||||  |||||||||| |||| ||  ||||| |||||||||||||||||||||  ||||  ||||     
T  10820270 ttaagtttctaaggtttcagatatgttcttt-aagtttcgagtttgtttcggataggtcttttaagtttctaaggtttcagataggttctttaagtttcg 10820368  T
Q  729 agtttattttagataggtcctttctatcaa 758  Q
    ||||| ||| ||||||||| ||||||||||    
T  10820369 agtttgtttcagataggtcatttctatcaa 10820398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 624 - 758
Target Start/End: Complemental strand, 13658229 - 13658096
Alignment:
Q  624 gtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttaga 723  Q
    |||| ||||||||||||||||| | ||| ||   |||||||||  |||||||||| |||| || ||||||  || | |||||||||||||||| ||||      
T  13658229 gtcctttaagtttctaaggtttcagataggt-cctttaagtttcgagtttgtttcggataagtcctttaagatttttaggtttcagataggtcctttaag 13658131  T
Q  724 tttcaagtttattttagataggtcctttctatcaa 758  Q
    |||| ||||| ||| ||||||||||||||||||||    
T  13658130 tttcgagtttgtttcagataggtcctttctatcaa 13658096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 657 - 771
Target Start/End: Complemental strand, 48518343 - 48518229
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatc 756  Q
    |||||||||| | |||||||||||||| ||||||||| ||| |||||||||||||| ||| |||| ||||  ||||| |||  |||||  | ||| | ||    
T  48518343 ttttaagtttcacgtttgtttcagataagttctttaagtttttaaggtttcagatatgtcctttaaattttgagtttgtttcggatagaccatttttgtc 48518244  T
Q  757 aacctccgttaagcc 771  Q
    |||||||||||||||    
T  48518243 aacctccgttaagcc 48518229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 54924138 - 54923997
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||  ||||||||||  |||  |||||||||||| ||||||||||||||| || || |  ||||     
T  54924138 ttaagtttctaaggtttcagataggt-tctttaagtttcgagtttgtttcgaatagattctttaaatttataaggtttcagatagttccttcaagtttcg 54924040  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| ||||| ||| |||||||||||||| ||||||||    
T  54924039 agtttgtttcagataagtcatttctatcaacctctgttaagcc 54923997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 669 - 758
Target Start/End: Original strand, 11218146 - 11218235
Alignment:
Q  669 agtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaa 758  Q
    |||||||||| ||||  | |||||| ||||||||||||| |||| ||||||||  |||| ||||| ||| ||||||||||||||||||||    
T  11218146 agtttgtttcggataaatcctttaagtttctaaggtttcggataagtcatttaagtttcgagtttgtttcagataggtcctttctatcaa 11218235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 13712392 - 13712299
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||||||| || |||||| |||||||||||||||||||||  ||||  |||| ||||| |||  ||||||||||||    
T  13712392 tttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcagataggttctttaagtttcgagtttgtttcggataggtccttt 13712299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 629 - 758
Target Start/End: Complemental strand, 24098232 - 24098104
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| || |||| | ||||  |||||| || |||||||| |||||| |||||||||||||||||||||| ||||  ||||     
T  24098232 ttaagtttctaaggtttcagataggtcatttca-gtttcgagtttgatttagatatgtcctttaagtttctaaggtttcagataggtcctttaagtttcg 24098134  T
Q  729 agtttattttagataggtcctttctatcaa 758  Q
    ||||| ||| || |||||  ||||||||||    
T  24098133 agtttgtttcaggtaggttttttctatcaa 24098104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 670 - 771
Target Start/End: Complemental strand, 25147488 - 25147387
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaag 769  Q
    |||||||||||||| || |||||| ||| |||| ||||||||||||| ||||  |||| ||||| |||  ||||| ||||| || |||||||||||||||    
T  25147488 gtttgtttcagataggtcctttaagtttttaagatttcagataggtcttttaagtttcgagtttgtttcggatagatccttcctgtcaacctccgttaag 25147389  T
Q  770 cc 771  Q
    ||    
T  25147388 cc 25147387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 623 - 716
Target Start/End: Original strand, 26997240 - 26997332
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtc 716  Q
    ||||| ||||||||||| ||||||| ||||||  ||| ||||||  |||||||||| ||||||| |||||| |||||||||||| |||||||||    
T  26997240 ggtcctttaagtttctagggtttaagatatgtccttt-aagtttcgagtttgtttcggatatgtcctttaagtttctaaggttttagataggtc 26997332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 703 - 771
Target Start/End: Original strand, 1771742 - 1771810
Alignment:
Q  703 gtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    |||||||||||||| ||||  |||| ||||| ||||||||||||| |||||||||||||| ||||||||    
T  1771742 gtttcagataggtcctttaagtttcgagtttgttttagataggtcatttctatcaacctctgttaagcc 1771810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 7515476 - 7515576
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| || |||||| ||||||||||||| |||||||| ||||  |||| ||||| ||| ||||||||  |||||||||    
T  7515476 tttaagttttgagtttgtttcggataggtcctttaagtttctaaggtttcggataggtcctttaagtttcgagtttgtttcagataggtaatttctatca 7515575  T
Q  758 a 758  Q
    |    
T  7515576 a 7515576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 3750615 - 3750729
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtc-atttagatttcaagtttattttagataggtcctttctatc 756  Q
    ||||||||| | |||||||||||||| || |||||| |||||||||||||| ||| |||  ||||  |||| ||||| |||  |||||||| ||||| ||    
T  3750615 tttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcaaataagtctttttaagtttcgagtttgtttcggataggtcatttctgtc 3750714  T
Q  757 aacctccgttaagcc 771  Q
    || ||||||||||||    
T  3750715 aatctccgttaagcc 3750729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 629 - 739
Target Start/End: Complemental strand, 47220541 - 47220432
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||||||  ||| ||||| |||||||||||| |||  || |||||| |||||||| ||||||||||||| ||||  ||||     
T  47220541 ttaagtttctaaggttttagatatgtccttt-aagttggaagtttgtttcggattggtcctttaagtttctaagatttcagataggtcctttaagtttcg 47220443  T
Q  729 agtttatttta 739  Q
    ||||| |||||    
T  47220442 agtttgtttta 47220432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 657 - 771
Target Start/End: Original strand, 48381911 - 48382024
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatc 756  Q
    |||||||||| | |||||||||||||| | || |||| ||| |||||||| |||||| |||||||  |||| ||||| ||| ||||| ||| ||| | ||    
T  48381911 ttttaagtttcacgtttgtttcagata-gatccttaagtttttaaggttttagatagatcatttaagtttcgagtttgtttcagatatgtcttttatgtc 48382009  T
Q  757 aacctccgttaagcc 771  Q
    |||||||||||||||    
T  48382010 aacctccgttaagcc 48382024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 24098264 - 24098171
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||  || |||||||| |||||||  ||||| ||||||||||||||||||||||||||   |||| |||||  |||||||| |||||||    
T  24098264 tttaagttgcaaatttgtttcggatatgtcatttaagtttctaaggtttcagataggtcatttcagtttcgagtttgatttagatatgtccttt 24098171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 670 - 751
Target Start/End: Complemental strand, 26997544 - 26997463
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||||||||  | |||||| |||||||||||||||||||||| ||||  ||| | |||| |||| ||||||||||||    
T  26997544 gtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgatgtttgttttggataggtccttt 26997463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 658 - 765
Target Start/End: Complemental strand, 50293860 - 50293753
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||| |||||||||  |||| |  |||||| |||||||||||||||||||||| ||||  |||  ||||| ||| |||||  ||  ||||||||    
T  50293860 tttaagtttggagtttgttttggataagccctttaagtttctaaggtttcagataggtcctttaagttttgagtttgtttcagatatatcaattctatca 50293761  T
Q  758 acctccgt 765  Q
    ||||||||    
T  50293760 acctccgt 50293753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 716
Target Start/End: Original strand, 11218079 - 11218137
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtc 716  Q
    ||||||||| | |||||||||||||| || |||||| |||||||||||| |||||||||    
T  11218079 tttaagttttatgtttgtttcagataggtcctttaagtttctaaggttttagataggtc 11218137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 716
Target Start/End: Complemental strand, 11871664 - 11871606
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtc 716  Q
    ||||||||||||||||||||| ||||  | |||||| ||||||| ||||||||||||||    
T  11871664 tttaagtttgaagtttgtttcggataactcctttaagtttctaaagtttcagataggtc 11871606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 7515416 - 7515509
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||||||| || |||||| ||||||| |||||||||| ||| ||||  |||  ||||| |||  ||||||||||||    
T  7515416 tttaagtttcacgtttgtttcagataggtcctttaagtttctaaagtttcagataagtcctttaagttttgagtttgtttcggataggtccttt 7515509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 11218449 - 11218356
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||| |||||||||  | |||||| |||||||||||||| | | ||| ||||  |||||||||| ||| |||||||||||||    
T  11218449 tttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcaaacatgtcctttaagtttcaagtttgtttcagataggtccttt 11218356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 11871412 - 11871505
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | || ||||||||||| || |||||| |||| ||||||||||||||||| ||||  |||| ||||| |||   |||||||||||    
T  11871412 tttaagtttcacgtctgtttcagataggtcctttaagtttccaaggtttcagataggtcctttaagtttcgagtttgtttcgtataggtccttt 11871505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 13657912 - 13658005
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  |  ||||| |||||||||||||||||| ||| ||||  |||  ||||| ||| |||||||||||||    
T  13657912 tttaagtttcatgtttgtttcagatagatcatttaagtttctaaggtttcagataagtcctttaagtttggagtttgtttcagataggtccttt 13658005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 670 - 751
Target Start/End: Complemental strand, 13658244 - 13658163
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    |||||||||| ||| || |||||| |||||||||||||||||||||| ||||  |||| ||||| |||  |||| |||||||    
T  13658244 gtttgtttcatataagtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggataagtccttt 13658163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 739 - 771
Target Start/End: Complemental strand, 11871614 - 11871582
Alignment:
Q  739 agataggtcctttctatcaacctccgttaagcc 771  Q
    |||||||||||||||||||||||||||||||||    
T  11871614 agataggtcctttctatcaacctccgttaagcc 11871582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 680 - 763
Target Start/End: Original strand, 43389913 - 43389996
Alignment:
Q  680 gatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctcc 763  Q
    |||||||||||||| ||| |||| |||||||||| || ||||  |||| ||||| ||| | |||||| ||||||||||| ||||    
T  43389913 gatatgttctttaagtttataagatttcagatagatcctttaagtttcgagtttgtttcaaataggtactttctatcaatctcc 43389996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 724 - 771
Target Start/End: Complemental strand, 48382200 - 48382153
Alignment:
Q  724 tttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    |||| ||||| ||||||||||||| |||||| ||||||||||||||||    
T  48382200 tttcgagtttgttttagataggtcatttctaacaacctccgttaagcc 48382153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 751
Target Start/End: Original strand, 48517931 - 48518022
Alignment:
Q  660 taagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||| | |||||||| |||||  | |||||| |||||||||||| ||||||||| ||||  |||| ||||| |||  ||||||||||||    
T  48517931 taagtttcatgtttgttttagatagatcctttaagtttctaaggttttagataggtcctttaagtttcgagtttgtttcggataggtccttt 48518022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 658 - 712
Target Start/End: Original strand, 10820238 - 10820292
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagata 712  Q
    ||||||||| | ||||||||||||||  | |||||| ||||||||||||||||||    
T  10820238 tttaagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagata 10820292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 659 - 721
Target Start/End: Original strand, 37148194 - 37148256
Alignment:
Q  659 ttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    |||||||| | ||||||  |||||| || |||||| |||||||||||||||||||||| ||||    
T  37148194 ttaagtttcatgtttgtaacagataggtcctttaagtttctaaggtttcagataggtccttta 37148256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 698
Target Start/End: Complemental strand, 11218417 - 11218349
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttc 698  Q
    ||||||||||||||||| ||| ||||  ||| |||||| |||||||||||||||| || |||||| ||||    
T  11218417 ttaagtttctaaggtttcaaacatgtccttt-aagtttcaagtttgtttcagataggtcctttaagtttc 11218349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 751
Target Start/End: Original strand, 29777273 - 29777354
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||||||||  | |||||| |||||||||||||| ||||||| ||||  |||  ||||| |||  ||||||||||||    
T  29777273 gtttgtttcagatagatcctttaagtttctaaggtttcatataggtcctttaagtttggagtttgtttcggataggtccttt 29777354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 33623443 - 33623350
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | || ||||| ||||| || |||||| ||||||||||||||||||| || ||||  |||| ||||| |||  |||| |||||||    
T  33623443 tttaagtttcacgtctgttttagataggtcctttaagtttctaaggtttcagatagatcctttaagtttcgagtttgtttcggatatgtccttt 33623350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 47220244 - 47220337
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||| ||||| ||||||||| ||||||| ||||||  ||  || |||| ||||| ||||| |||  ||||||||||||    
T  47220244 tttaagtttcacgtttgtttaagataggttctttaagtttctaaagtttcaactaaatcctttaaatttcgagtttgtttcggataggtccttt 47220337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 721
Target Start/End: Complemental strand, 50293918 - 50293857
Alignment:
Q  660 taagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||| | ||||||||||||||  | |||||| ||| |||||||||||||||||| ||||    
T  50293918 taagttttatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtccttta 50293857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 4e-34; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 35779038 - 35778897
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    |||||||| |||||||| | ||| || |||| ||||||  ||||||||||||||| || ||||||||||| ||||||||||||||||||||||  ||||     
T  35779038 ttaagtttttaaggtttcagataagtcattt-aagtttcgagtttgtttcagataggtcctttaaatttccaaggtttcagataggtcatttaagtttcg 35778940  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| |||||||||||||||||||||||||||||||||    
T  35778939 agtttgtttcagataggtcctttctatcaacctccgttaagcc 35778897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 629 - 769
Target Start/End: Original strand, 53856518 - 53856657
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||||||  |||||||||||||||||||||   ||  || |||||| |||||||||||||||||||||| ||||  ||||     
T  53856518 ttaagtttctaaggtttcagatatgtc-ttttaagtttgaagtttgttttgaattggtcctttaagtttctaaggtttcagataggtcctttaagtttcg 53856616  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaag 769  Q
    ||||| |||||||||||||||||||||||| ||||||||||    
T  53856617 agtttgttttagataggtcctttctatcaatctccgttaag 53856657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 14336925 - 14336812
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||||||||||||||| |||| || |||||| |||||||||||||||||||||| ||||  |||| ||||| ||| |||||||||||||||||||    
T  14336925 tttaagtttgaagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtcctttctatca 14336826  T
Q  758 acctccgttaagcc 771  Q
    || || ||||||||    
T  14336825 acttcagttaagcc 14336812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 25154602 - 25154702
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||||||||||| |||||| |||||||||||| |||||| |||||||| |||| ||||| ||||||||||||| |||||||||    
T  25154602 tttaagtttcgagtttgtttcagatatgtcctttaagtttctaaggtttaagatagctcatttaggtttcgagtttgttttagataggtcatttctatca 25154701  T
Q  758 a 758  Q
    |    
T  25154702 a 25154702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 629 - 771
Target Start/End: Original strand, 32751157 - 32751297
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| || |||| |||||||||||||||||| |||| ||  ||||| | |||||| |||||||||| || ||||  ||||     
T  32751157 ttaagtttctaaggtttcagataggtcattt-aagtttgaagtttgtttcggataggtcttttaagtctctaag-tttcagatagatcctttaagtttcg 32751254  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| |||||||||||||||||||||||||||||||||    
T  32751255 agtttgtttcagataggtcctttctatcaacctccgttaagcc 32751297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 670 - 771
Target Start/End: Original strand, 13846625 - 13846726
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaag 769  Q
    ||||||||||||||  | |||||| |||||||||||||||||||||| ||||  |||| ||||| ||| ||||||||||||| |||||||||||||||||    
T  13846625 gtttgtttcagatagatcctttaagtttctaaggtttcagataggtcttttaagtttcgagtttgtttcagataggtcctttatatcaacctccgttaag 13846724  T
Q  770 cc 771  Q
    ||    
T  13846725 cc 13846726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 662 - 771
Target Start/End: Original strand, 18598212 - 18598321
Alignment:
Q  662 agtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacct 761  Q
    ||||| |||||||||||||||| || |||||| ||||||||||||||||||| ||||||| ||||| ||||| |||  |||||||||||||| |||| ||    
T  18598212 agtttcaagtttgtttcagataggtcctttaagtttctaaggtttcagatagatcatttaaatttcgagtttgtttcggataggtcctttctgtcaatct 18598311  T
Q  762 ccgttaagcc 771  Q
     |||||||||    
T  18598312 tcgttaagcc 18598321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 41898418 - 41898305
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| ||||||||||||||||  |  ||||| |||||||||||||||||| ||| ||||  |||| ||||| ||||||||| |||||||||||||    
T  41898418 tttaagtttcaagtttgtttcagatagatcatttaagtttctaaggtttcagatatgtcctttaagtttcgagtttgttttagatatgtcctttctatca 41898319  T
Q  758 acctccgttaagcc 771  Q
    |||| |||||||||    
T  41898318 accttcgttaagcc 41898305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 14336702 - 14336802
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| || |||||| |||||||||||||||||||||||||||  |||| ||||| ||| |||||||||||||||||||    
T  14336702 tttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcatttaagtttcgagtttctttcagataggtcctttctatca 14336801  T
Q  758 a 758  Q
    |    
T  14336802 a 14336802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 658 - 769
Target Start/End: Complemental strand, 25363585 - 25363474
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  ||||||||||  |||||| |||||| |||||||||||||||||||||| ||||  |||| ||||| ||| |||||| |||| |||||||    
T  25363585 tttaagtttcgagtttgtttcgaatatgtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagatagttcctatctatca 25363486  T
Q  758 acctccgttaag 769  Q
    ||||||||||||    
T  25363485 acctccgttaag 25363474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 657 - 771
Target Start/End: Complemental strand, 6112093 - 6111979
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatc 756  Q
    ||||||||||| |||||||||  |||| ||  ||||| |||||||||||||||||||||| ||||  |||| ||||| ||| | ||||||||||||||||    
T  6112093 ttttaagtttggagtttgttttggataggtcttttaagtttctaaggtttcagataggtcgtttaagtttcgagtttgtttcaaataggtcctttctatc 6111994  T
Q  757 aacctccgttaagcc 771  Q
    ||||| |||||||||    
T  6111993 aaccttcgttaagcc 6111979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 15631671 - 15631558
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| || |||||| |||||||||||||| || |||| ||||  |||| ||||| ||| ||||||||| |||||||||    
T  15631671 tttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcaaatgggtcctttaagtttcgagtttgtttcagataggtcttttctatca 15631572  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  15631571 acctccgttaagcc 15631558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 23159112 - 23159225
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| ||||    |||||| |||||||||||||||||||||| ||||  |||| ||||| ||| ||||||||| |||||||||    
T  23159112 tttaagttttgagtttgtttcggatagaccctttaagtttctaaggtttcagataggtcttttaactttcgagtttgtttcagataggtcatttctatca 23159211  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  23159212 acctccgttaagcc 23159225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 40998185 - 40998297
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  ||||||||||||||| || |||||| || ||||||||||||||||||| ||||  |||| ||||| ||| ||||| |||||||||||||    
T  40998185 tttaagtttcgagtttgtttcagataggtcctttaagtt-ctaaggtttcagataggtcctttaagtttcgagtttgtttcagatatgtcctttctatca 40998283  T
Q  758 acctccgttaagcc 771  Q
    ||||| ||||||||    
T  40998284 acctctgttaagcc 40998297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 40998515 - 40998402
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||| ||||||||||||||| ||| |||||||||||||||||  ||||  |||| ||||| |||  |||| ||||||||| |||    
T  40998515 tttaagtttcacgtttgttttagatatgttctttaagtttataaggtttcagataggttctttaagtttcgagtttgtttcggatatgtcctttctgtca 40998416  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  40998415 acctccgttaagcc 40998402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 669 - 769
Target Start/End: Complemental strand, 25154813 - 25154714
Alignment:
Q  669 agtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaa 768  Q
    |||||||||| |||| || ||| || ||||||||||||||||||| || ||||  |||||||||| ||| ||||||||||||||||||||||||||||||    
T  25154813 agtttgtttcggataggtcctt-aagtttctaaggtttcagatagatcctttaagtttcaagtttgtttcagataggtcctttctatcaacctccgttaa 25154715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 680 - 771
Target Start/End: Complemental strand, 29031614 - 29031523
Alignment:
Q  680 gatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    |||||||  ||||| |||||||||||||||||||||||||||  |||| ||||| |||  |||||||| |||||||||||||||||||||||    
T  29031614 gatatgtcttttaagtttctaaggtttcagataggtcatttaagtttcgagtttgtttccgataggtcatttctatcaacctccgttaagcc 29031523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 680 - 771
Target Start/End: Complemental strand, 29043734 - 29043643
Alignment:
Q  680 gatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    |||||||  ||||| |||||||||||||||||||||||||||  |||| ||||| |||  |||||||| |||||||||||||||||||||||    
T  29043734 gatatgtcttttaagtttctaaggtttcagataggtcatttaagtttcgagtttgtttccgataggtcatttctatcaacctccgttaagcc 29043643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 670 - 771
Target Start/End: Original strand, 15631352 - 15631453
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaag 769  Q
    |||| ||||||||| || |||||||||||||||||||||||||| || ||||  |||| ||||| |||  |||| ||||||||| |||||||||||||||    
T  15631352 gtttatttcagataggtcctttaaatttctaaggtttcagatagatcctttaagtttcgagtttgtttcggataagtcctttctgtcaacctccgttaag 15631451  T
Q  770 cc 771  Q
    ||    
T  15631452 cc 15631453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 674 - 763
Target Start/End: Complemental strand, 52851197 - 52851109
Alignment:
Q  674 gtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctcc 763  Q
    |||||||||| || |||||| |||| ||||||||||||||||| ||||  |||| ||||| |||||||||||||||||||||||||||||    
T  52851197 gtttcagataggt-ctttaagtttccaaggtttcagataggtcctttaagtttccagtttgttttagataggtcctttctatcaacctcc 52851109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 623 - 758
Target Start/End: Original strand, 32557098 - 32557232
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttag 722  Q
    ||||| |||| ||||||| |||| ||||| ||  |||||| ||| ||||||||||| ||||  | |||||| |||||||||||||| ||||||| ||||     
T  32557098 ggtcctttaaatttctaaagtttcaaataagtc-ttttaaattttaagtttgtttcggatagatcctttaagtttctaaggtttcatataggtcctttaa 32557196  T
Q  723 atttcaagtttattttagataggtcctttctatcaa 758  Q
    ||||||||||| ||| | ||||||| ||||||||||    
T  32557197 atttcaagtttgtttcatataggtcatttctatcaa 32557232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 622 - 758
Target Start/End: Original strand, 41898161 - 41898295
Alignment:
Q  622 gggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    |||||| ||||||||||||||||| | ||| ||  ||||||||||  |||||||||| ||||  | |||||| ||||||||||||||||||| || ||||    
T  41898161 gggtcctttaagtttctaaggtttcagataggt--ttttaagtttcgagtttgtttcggatagatcctttaagtttctaaggtttcagatagatccttta 41898258  T
Q  722 gatttcaagtttattttagataggtcctttctatcaa 758  Q
      |||| ||||| ||| ||||||||| ||| ||||||    
T  41898259 agtttcgagtttgtttcagataggtcttttatatcaa 41898295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 658 - 758
Target Start/End: Complemental strand, 13846836 - 13846736
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  ||||| |||| |||| || |||||| |||||||||||| ||||||||| ||||  |||||||||| ||| ||||||||| |||||||||    
T  13846836 tttaagtttcgagtttatttcggataggtcctttaagtttctaaggttttagataggtcctttaagtttcaagtttgtttcagataggtcgtttctatca 13846737  T
Q  758 a 758  Q
    |    
T  13846736 a 13846736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 658 - 758
Target Start/End: Complemental strand, 13864168 - 13864068
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| |||||| |||| |||| || |||||| |||||||||||| ||||||||| ||||  |||||||||| ||| |||||| || |||||||||    
T  13864168 tttaagttttaagtttatttcggataggtcctttaagtttctaaggttttagataggtcctttaagtttcaagtttgtttcagatagatcatttctatca 13864069  T
Q  758 a 758  Q
    |    
T  13864068 a 13864068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 674 - 758
Target Start/End: Original strand, 20421183 - 20421267
Alignment:
Q  674 gtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaa 758  Q
    |||||||||| || |||||| ||||||||||||||||| |||| |||| ||||| ||||| ||| ||||||||| ||||||||||    
T  20421183 gtttcagataggtcctttaagtttctaaggtttcagatgggtcctttaaatttcgagtttgtttcagataggtcatttctatcaa 20421267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 658 - 761
Target Start/End: Complemental strand, 32557355 - 32557251
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttcttt-aaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatc 756  Q
    |||||||||  |||||||||| |||| || |||| |||||||||||||||||| |||||| ||||  |||||| ||  ||||||||| ||||||||||||    
T  32557355 tttaagttttgagtttgtttcggataggtccttttaaatttctaaggtttcagttaggtcctttaagtttcaatttatttttagatatgtcctttctatc 32557256  T
Q  757 aacct 761  Q
    |||||    
T  32557255 aacct 32557251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 658 - 770
Target Start/End: Complemental strand, 40289692 - 40289580
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| || |||||| ||||||||| |||| ||||||| ||||  |||| ||||||||| |||||  |  |||||||||    
T  40289692 tttaagttttgagtttgtttcggataggtcctttaagtttctaaggattcatataggtcctttaagtttcgagtttatttcagatatattatttctatca 40289593  T
Q  758 acctccgttaagc 770  Q
    |||||||||||||    
T  40289592 acctccgttaagc 40289580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 629 - 758
Target Start/End: Original strand, 46429765 - 46429897
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | |||||  |||| ||||||  ||||||||||  |||| | |||||| |||||||||||||||||| ||| ||||| |||||    
T  46429765 ttaagtttctaaggttttagatatggcattt-aagtttcgagtttgtttcgaatatatcctttaagtttctaaggtttcagatatgtcctttaggtttca 46429863  T
Q  729 agtttattt----tagataggtcctttctatcaa 758  Q
    ||||| |||    |||||||||| ||||||||||    
T  46429864 agtttgtttcagatagataggtcttttctatcaa 46429897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 21956040 - 21956134
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttatttt-agataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| |||||||||||||||||||||| |||| ||||| ||||| ||||  ||||||||||||    
T  21956040 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaaatttcgagtttgttttcggataggtccttt 21956134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 13870444 - 13870556
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||||| ||||||||  ||| || |||||| |||||||||||||| ||| ||  ||||  |||| ||||| ||| ||||||||| |||||||||    
T  13870444 tttaagtttgaa-tttgtttcgaataggtcctttaagtttctaaggtttcaaatatgttctttaagtttcgagtttgtttcagataggtcatttctatca 13870542  T
Q  758 acctccgttaagcc 771  Q
    ||||| ||||||||    
T  13870543 acctctgttaagcc 13870556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 14966454 - 14966341
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| || |||||| ||||||| ||||| ||||| || ||||  |||  ||||| ||| ||||||||| |||||||||    
T  14966454 tttaagtttcgagtttgtttcggataggtcctttaagtttctaaagtttcggatagatcctttaagttttgagtttgtttcagataggtcatttctatca 14966355  T
Q  758 acctccgttaagcc 771  Q
    ||||| ||||||||    
T  14966354 acctctgttaagcc 14966341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 18598562 - 18598449
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| || |||||| |||| ||||||||||||| ||| ||||  |||  | ||| ||| || ||||||||||||||||    
T  18598562 tttaagtttcgagtttgtttcggataggtcctttaagtttcaaaggtttcagataagtcctttaagttttgattttgtttcaggtaggtcctttctatca 18598463  T
Q  758 acctccgttaagcc 771  Q
    |||| |||||||||    
T  18598462 accttcgttaagcc 18598449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 18598622 - 18598529
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| |||||||||| ||||| || || ||| |||||||||||||||||||||| ||||  |||| ||||| |||  ||||||||||||    
T  18598622 tttaagtttcaagtttgttttagataggtcctctaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggataggtccttt 18598529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 767
Target Start/End: Complemental strand, 21956454 - 21956345
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | ||||||||| |||| || |||||| ||| |||||||||||||||||| ||||  |||| ||||| |||  |||| ||||||||| |||    
T  21956454 tttaagtttcatgtttgtttcggataggtcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcggatatgtcctttctgtca 21956355  T
Q  758 acctccgtta 767  Q
    || |||||||    
T  21956354 acatccgtta 21956345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 675 - 771
Target Start/End: Original strand, 21956118 - 21956214
Alignment:
Q  675 tttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    |||| |||| || |||||| |||||||||||||||||||||| ||||  |||| ||||| |||  |||||||||| | | |||||||||||||||||    
T  21956118 tttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggataggtcctctttgtcaacctccgttaagcc 21956214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 658 - 754
Target Start/End: Complemental strand, 27390009 - 27389913
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttcta 754  Q
    ||||| ||||||||||||||| |||| || |||||| |||||| |||||||||| |||| |||   |||| ||||| ||| ||||||||||||||||    
T  27390009 tttaaatttgaagtttgtttcggataggtcctttaagtttctagggtttcagattggtcctttcagtttcgagtttgtttcagataggtcctttcta 27389913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 669 - 769
Target Start/End: Complemental strand, 34508935 - 34508835
Alignment:
Q  669 agtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaa 768  Q
    ||||||||||  ||| || |||||| ||| |||||||||||||| ||| ||||  |||| ||||| ||| ||||| ||||||||||||||||| ||||||    
T  34508935 agtttgtttcgaataggtcctttaagtttttaaggtttcagataagtcctttaagtttcgagtttgtttgagatatgtcctttctatcaaccttcgttaa 34508836  T
Q  769 g 769  Q
    |    
T  34508835 g 34508835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 658 - 769
Target Start/End: Original strand, 14966103 - 14966214
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||||||||| ||  |||||||||||||||||||| ||| ||| ||||  |||| ||| |||||   ||| ||| ||||| |||    
T  14966103 tttaagtttcacgtttgtttcagataggtcatttaaatttctaaggtttcaaatatgtcttttaagtttcgagtgtatttcgaataagtcatttctgtca 14966202  T
Q  758 acctccgttaag 769  Q
    ||||||||||||    
T  14966203 acctccgttaag 14966214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 658 - 721
Target Start/End: Original strand, 20421138 - 20421201
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    |||||||||  ||||||||||||||| || |||||| |||||||||||||||||||||| ||||    
T  20421138 tttaagtttcgagtttgtttcagataggtcctttaagtttctaaggtttcagataggtccttta 20421201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 658 - 721
Target Start/End: Original strand, 34979497 - 34979560
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | |||||||||||||| || |||||| |||||||||||||||||||||| ||||    
T  34979497 tttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcagataggtccttta 34979560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 658 - 712
Target Start/End: Complemental strand, 32751376 - 32751322
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagata 712  Q
    ||||||||| |||||||||||||||| || |||||| ||||||||||||||||||    
T  32751376 tttaagtttaaagtttgtttcagataggtcctttaagtttctaaggtttcagata 32751322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 669 - 747
Target Start/End: Complemental strand, 53856758 - 53856680
Alignment:
Q  669 agtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtc 747  Q
    |||||||||| |||| || ||||||||||||||||||||||||||||| ||||  |||||| ||| ||| | |||||||    
T  53856758 agtttgtttcggataggtcctttaaatttctaaggtttcagataggtcctttaagtttcaactttgtttcaaataggtc 53856680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 14336642 - 14336735
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||||||| || |||||| ||| ||| |||||||||||||| ||||  |||| ||||| |||  ||||||||||||    
T  14336642 tttaagttttacgtttgtttcagataggtcctttaagtttttaaagtttcagataggtcctttaagtttcgagtttgtttcggataggtccttt 14336735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 14336985 - 14336892
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| ||||||||||||||||| |||| ||||  ||| |||||| |||  ||||||||||||    
T  14336985 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagatgggtcctttaagtttgaagtttgtttcggataggtccttt 14336892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 20421078 - 20421171
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||||||| || |||||| |||||||  ||||| ||||||| ||||  |||| ||||| ||| |||||||||||||    
T  20421078 tttaagtttaacgtttgtttcagataggtcctttaagtttctaaaatttcatataggtcctttaagtttcgagtttgtttcagataggtccttt 20421171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 29031282 - 29031395
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||| ||||| ||  ||||| |||||||| ||||||||||||| ||||  |||| ||||| |||  ||||  ||||||||  ||    
T  29031282 tttaagtttcacgtttgttttagataagtcttttaagtttctaagatttcagataggtcctttaagtttcgagtttgtttcggatacatcctttctgcca 29031381  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  29031382 acctccgttaagcc 29031395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 29043401 - 29043514
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||| ||||| ||  ||||| |||||||| ||||||||||||| ||||  |||| ||||| |||  ||||  ||||||||  ||    
T  29043401 tttaagtttcacgtttgttttagataagtcttttaagtttctaagatttcagataggtcctttaagtttcgagtttgtttcggatacatcctttctgcca 29043500  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  29043501 acctccgttaagcc 29043514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 670 - 747
Target Start/End: Original strand, 32751137 - 32751214
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtc 747  Q
    |||||||| |||||  |||||||| |||||||||||||||||||||||||||  ||| |||||| |||  ||||||||    
T  32751137 gtttgtttaagatagattctttaagtttctaaggtttcagataggtcatttaagtttgaagtttgtttcggataggtc 32751214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 32751436 - 32751343
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||||||| ||  ||||| |||||||||||| |||||| || ||||  ||| |||||| ||| |||||||||||||    
T  32751436 tttaagttttatgtttgtttcagataggtcttttaagtttctaaggttttagatagctcctttaagtttaaagtttgtttcagataggtccttt 32751343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 52850891 - 52851004
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | ||||||||  ||||||| ||||||||||| ||||||||||||| ||| ||||  ||||  |||| |||| |||| |||| |||| |||    
T  52850891 tttaagtttcacgtttgttttggatatgtcctttaaatttcgaaggtttcagataagtcctttaagtttcgggtttgttttggatatgtccattctgtca 52850990  T
Q  758 acctccgttaagcc 771  Q
    |||||  |||||||    
T  52850991 acctctattaagcc 52851004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 657 - 749
Target Start/End: Complemental strand, 3253546 - 3253454
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcct 749  Q
    |||||||||| | ||||||||||| ||  | |||||||||||||| ||||||||||| || |||| ||||  ||||| ||| |||||||||||    
T  3253546 ttttaagtttcatgtttgtttcagttagatcctttaaatttctaatgtttcagatagatcctttaaatttggagtttgtttcagataggtcct 3253454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 6111869 - 6111969
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| ||  ||||| |||||||| ||||||||||||| ||||  |||  ||||| ||| ||| |||||||||||||||    
T  6111869 tttaagttttgagtttgtttcggataggtcgtttaagtttctaagatttcagataggtcctttaagttttgagtttgtttaagacaggtcctttctatca 6111968  T
Q  758 a 758  Q
    |    
T  6111969 a 6111969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 703 - 771
Target Start/End: Original strand, 7632915 - 7632983
Alignment:
Q  703 gtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| |||||||| ||||  |||| ||||| ||| ||||| |||||||||||||||||||||||||||    
T  7632915 gtttcggataggtcctttaagtttcgagtttgtttcagatatgtcctttctatcaacctccgttaagcc 7632983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 50523137 - 50523237
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| ||||  | |||||| |||||||||||||||||| ||| |||| ||||  ||||| ||| ||||||||  |||||||||    
T  50523137 tttaagtttcgagtttgtttcggatagatcctttaagtttctaaggtttcagataagtcctttaaattttgagtttgtttcagataggtaatttctatca 50523236  T
Q  758 a 758  Q
    |    
T  50523237 a 50523237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 716
Target Start/End: Original strand, 5322578 - 5322636
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtc 716  Q
    |||||||||  |||||||||  |||| || |||||||||||||||||||||||||||||    
T  5322578 tttaagttttgagtttgttttggataggtcctttaaatttctaaggtttcagataggtc 5322636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 657 - 751
Target Start/End: Complemental strand, 7633124 - 7633031
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    |||||||||| | | |||||||| ||| || |||||| |||||||||||| ||||||||| ||||  |||||||||| |||  ||||||||||||    
T  7633124 ttttaagttttacgattgtttca-ataggtcctttaagtttctaaggttttagataggtcctttaagtttcaagtttgtttcggataggtccttt 7633031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 721
Target Start/End: Original strand, 34979523 - 34979620
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||| ||||||||||||||||| | ||| ||   |||||||||  ||||||||||  ||| || |||||| |||||||||||||||||||||| ||||    
T  34979523 ggtcctttaagtttctaaggtttcagataggt-cctttaagtttcgagtttgtttcgaataagtcctttaagtttctaaggtttcagataggtccttta 34979620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 744
Target Start/End: Complemental strand, 41898466 - 41898392
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagatag 744  Q
    |||||||||| |||  |||||| | |||||||||||||||||||||| ||||  |||||||||| ||| ||||||    
T  41898466 gtttgtttcatatagattctttcagtttctaaggtttcagataggtcctttaagtttcaagtttgtttcagatag 41898392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 5322518 - 5322611
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||| | |||  | |||||||||||||||||| |||||||||| ||||  |||  ||||| |||| ||||||||||||    
T  5322518 tttaagtttcatgtttgtttaaaatagatcctttaaatttctaaggttgcagataggtcctttaagttttgagtttgttttggataggtccttt 5322611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 7632839 - 7632932
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||| |||||||||  | |||||| |||||||||||||||||| ||| ||||  ||| |||||| |||  ||||||||||||    
T  7632839 tttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagataagtcctttaagtttgaagtttgtttcggataggtccttt 7632932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 15631731 - 15631638
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||| |||  | |||||| ||| |||||||||||||||||| ||||  |||| ||||| |||  ||||||||||||    
T  15631731 tttaagtttcatgtttgtttcacatagatcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcggataggtccttt 15631638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 703 - 768
Target Start/End: Original strand, 25363300 - 25363365
Alignment:
Q  703 gtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaa 768  Q
    |||||||||||||||||||  |||| ||||| ||| ||||| ||| ||||| ||||||||||||||    
T  25363300 gtttcagataggtcatttaagtttcgagtttgtttcagatatgtcttttctgtcaacctccgttaa 25363365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 26554039 - 26553946
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||| |||||||||  | |||||| ||||||||||||||| |||||| ||||  |||| ||||| |||  ||||||||||||    
T  26554039 tttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagttaggtcctttaagtttcgagtttgtttcggataggtccttt 26553946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 35779070 - 35778977
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||  ||||  | |||||| ||| |||||||||||||| ||||||||  |||| ||||| ||| |||||||||||||    
T  35779070 tttaagtttcatgtttgttttcgatagatcctttaagtttttaaggtttcagataagtcatttaagtttcgagtttgtttcagataggtccttt 35778977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 715
Target Start/End: Original strand, 41898136 - 41898193
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggt 715  Q
    ||||||||| | |||||||||||||  || |||||| |||||||||||||||||||||    
T  41898136 tttaagtttcacgtttgtttcagatgggtcctttaagtttctaaggtttcagataggt 41898193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 53856829 - 53856736
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| ||||||| |||||||||||||| ||||  | || ||||| |||  ||||||||||||    
T  53856829 tttaagtttcacgtttgtttcagatagatcctttaagtttctaaagtttcagataggtcctttaagtgtcgagtttgtttcggataggtccttt 53856736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 703 - 771
Target Start/End: Original strand, 35778724 - 35778792
Alignment:
Q  703 gtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    |||||||||||||| ||||  |||| ||||| |||  ||||| |||||||| |||||||||||||||||    
T  35778724 gtttcagataggtcctttaagtttcgagtttgtttcggatagatcctttctgtcaacctccgttaagcc 35778792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 739 - 771
Target Start/End: Complemental strand, 50523279 - 50523247
Alignment:
Q  739 agataggtcctttctatcaacctccgttaagcc 771  Q
    |||||||||||||||||||||||||||||||||    
T  50523279 agataggtcctttctatcaacctccgttaagcc 50523247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 657 - 721
Target Start/End: Complemental strand, 55358623 - 55358559
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    |||||||||| | ||||||||||||||  | |||||| |||||||||||||||||| ||| ||||    
T  55358623 ttttaagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagatatgtccttta 55358559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 717
Target Start/End: Complemental strand, 26553979 - 26553920
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtca 717  Q
    |||||||||  |||||||||| |||| || |||||| ||||||||||||||||| |||||    
T  26553979 tttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagatgggtca 26553920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 659 - 758
Target Start/End: Original strand, 27389805 - 27389904
Alignment:
Q  659 ttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaa 758  Q
    |||||||| | |||||||||||||| || |||||| ||| |||| ||||||||| ||| ||||  |||| ||||| ||| ||||| ||  ||||||||||    
T  27389805 ttaagtttaacgtttgtttcagataggtcctttaagtttttaagatttcagataagtcctttaagtttcgagtttgtttcagataagttatttctatcaa 27389904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 751
Target Start/End: Original strand, 32557084 - 32557165
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    |||||||| ||||| || |||||||||||||| |||||| ||| ||| |||| |||| |||||| |||  ||||| ||||||    
T  32557084 gtttgttttagataggtcctttaaatttctaaagtttcaaataagtcttttaaattttaagtttgtttcggatagatccttt 32557165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 747
Target Start/End: Complemental strand, 41511368 - 41511279
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtc 747  Q
    ||||||||| | |||| |||||||||  |  ||||| ||||||| |||||||||||||| |||| |||| |||||| |||  ||||||||    
T  41511368 tttaagttttatgtttatttcagatagatcatttaagtttctaaagtttcagataggtcctttaaattttaagtttgtttcggataggtc 41511279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 2e-33; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 1695785 - 1695898
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||||||||||||||| ||| || |||||| |||||||||||||||||||||| ||||  |||| ||||| ||| |||||||||||||||||||    
T  1695785 tttaagtttgaagtttgtttcaaataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtcctttctatca 1695884  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  1695885 acctccgttaagcc 1695898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 629 - 769
Target Start/End: Complemental strand, 1102930 - 1102790
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggttt-cagataggtcatttagatttc 727  Q
    ||||||||||||||||| | ||| ||  |||||||||||||||||||||| |||| || |||||| |||||||||||| |||||||||| ||||  ||||    
T  1102930 ttaagtttctaaggtttcagataggtc-ttttaagtttgaagtttgtttcggataggtcctttaagtttctaaggttttcagataggtcctttaagtttc 1102832  T
Q  728 aagtttattttagataggtcctttctatcaacctccgttaag 769  Q
     ||||| ||||||||||||| |||||||||||||||||||||    
T  1102831 gagtttgttttagataggtcatttctatcaacctccgttaag 1102790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 48074437 - 48074324
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||||||||||| |||||| |||||||||||||||||||||||||||  |||  ||||| ||| ||||| |||||||||||||    
T  48074437 tttaagtttcgagtttgtttcagatatgtcctttaagtttctaaggtttcagataggtcatttaagttttgagtttgtttcagatatgtcctttctatca 48074338  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  48074337 acctccgttaagcc 48074324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 18088337 - 18088197
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||| ||| ||||| ||   || ||||||| |||||||||| |||| || |||||| ||| |||||||||||||||||| |||| ||||||    
T  18088337 ttaagtttctaagatttcaaataggtc--ttcaagtttggagtttgtttcggataggtcctttaagtttttaaggtttcagataggtcctttaaatttca 18088240  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||||||||| | | |||||||||||||||||||||||    
T  18088239 agtttgttttagataagccttttctatcaacctccgttaagcc 18088197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 658 - 757
Target Start/End: Original strand, 4964923 - 4965022
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| || |||||| |||||||||||||||||||||| |||| ||||||||||| ||| |||||||||||||||||||    
T  4964923 tttaagttttgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaaatttcaagtttgtttcagataggtcctttctatca 4965022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 29987532 - 29987391
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| ||||| ||  ||| ||||| ||||||||||||  ||| || |||||| ||||||||||||||||||| || ||||  ||||     
T  29987532 ttaagtttctaaggtttcaaataggtccttt-aagttggaagtttgtttcgaataggtcctttaagtttctaaggtttcagatagatcctttaagtttcg 29987434  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| |||||||||||||||||| |||||| |||||||    
T  29987433 agtttgtttcagataggtcctttctatcgacctcctttaagcc 29987391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 629 - 758
Target Start/End: Original strand, 41810777 - 41810905
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   ||||||||| ||||||||||| |||||||  ||||| |||||||||||||||||||||| ||||  ||||     
T  41810777 ttaagtttctaaggtttcagataggt-cctttaagttttaagtttgtttcggatatgtcatttaagtttctaaggtttcagataggtcctttaagtttcg 41810875  T
Q  729 agtttattttagataggtcctttctatcaa 758  Q
    ||||| ||| ||||||||||||||||||||    
T  41810876 agtttgtttcagataggtcctttctatcaa 41810905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 629 - 761
Target Start/End: Original strand, 4974874 - 4975005
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   ||||||||||||||||||||| |||| || |||||| |||||||||||||||||||||| ||||  |||      
T  4974874 ttaagtttctaaggttttagataggt-cctttaagtttgaagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagttttg 4974972  T
Q  729 agtttattttagataggtcctttctatcaacct 761  Q
    ||||| ||| |||||| ||||||||||||||||    
T  4974973 agtttgtttcagatagatcctttctatcaacct 4975005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 629 - 768
Target Start/End: Original strand, 4764875 - 4765013
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||| ||| ||||| ||  ||| ||||||| |||||||||| |||| || |||||| |||||||||||||||||||||| ||||  ||||     
T  4764875 ttaagtttctaagatttcaaataggtccttt-aagtttgtagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcg 4764973  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaa 768  Q
    ||||| ||| | ||| ||||||||||||||||||| ||||    
T  4764974 agtttgtttcatataagtcctttctatcaacctccattaa 4765013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 629 - 751
Target Start/End: Complemental strand, 20492067 - 20491946
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| || |||| ||||||  ||||||||||||||| || |||||| |||||||||||||||||||||| ||||  ||||     
T  20492067 ttaagtttctaaggtttcagataggtcattt-aagtttcgagtttgtttcagataggtcctttaagtttctaaggtttcagataggtcctttaagtttcg 20491969  T
Q  729 agtttattttagataggtccttt 751  Q
    |||||||||  ||||||||||||    
T  20491968 agtttatttcggataggtccttt 20491946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 15057243 - 15057336
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| ||||||||||| |||||||||||||| |||||||| ||| ||||||||| ||||| |||| ||||| ||||||||| |||||||    
T  15057243 tttaagtttcaagtttgtttcggatatgttctttaagtttctaagattttagataggtcctttaggtttcgagtttgttttagatatgtccttt 15057336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 669 - 771
Target Start/End: Complemental strand, 39834281 - 39834178
Alignment:
Q  669 agtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttaga-tttcaagtttattttagataggtcctttctatcaacctccgtta 767  Q
    ||||||||| ||||| ||  ||||| |||||||||||||||||||||| |||  | |||| ||||| ||| |||||||||||||||||||||||||||||    
T  39834281 agtttgttttagataggtcatttaagtttctaaggtttcagataggtccttttaagtttcgagtttgtttcagataggtcctttctatcaacctccgtta 39834182  T
Q  768 agcc 771  Q
    ||||    
T  39834181 agcc 39834178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 657 - 771
Target Start/End: Complemental strand, 29386387 - 29386273
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatc 756  Q
    ||||||||||| ||||||||||  ||| ||  ||||| |||||||||||||||||||||| ||||  |||| |||||||||  ||||| || ||||||||    
T  29386387 ttttaagtttggagtttgtttcgaataggtcttttaagtttctaaggtttcagataggtcctttaagtttcgagtttatttcggatagatcttttctatc 29386288  T
Q  757 aacctccgttaagcc 771  Q
    ||||||||| |||||    
T  29386287 aacctccgtgaagcc 29386273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 20492099 - 20492006
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| |||||||||||||||||||||||||||  |||| ||||| ||| |||||||||||||    
T  20492099 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcatttaagtttcgagtttgtttcagataggtccttt 20492006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 41811026 - 41810915
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||||||||| | ||||||| |||||||||||||||||||||| |||| ||||| |||||  || | ||||| |||||||||||    
T  41811026 tttaagtttcatgtttgtttcagata-gatctttaagtttctaaggtttcagataggtcctttaaatttcgagtttgcttcatatagg-cctttctatca 41810929  T
Q  758 acctccgttaagcc 771  Q
    | ||||||||||||    
T  41810928 atctccgttaagcc 41810915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 671 - 771
Target Start/End: Complemental strand, 18030616 - 18030516
Alignment:
Q  671 tttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagc 770  Q
    ||||||||||||| || |||||||||||||||||||||||||  | |||||  |||| ||||| |||| |||| ||||||| | ||||||||||||||||    
T  18030616 tttgtttcagataagtcctttaaatttctaaggtttcagatatattatttaagtttcgagtttgttttggataagtcctttatgtcaacctccgttaagc 18030517  T
Q  771 c 771  Q
    |    
T  18030516 c 18030516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 629 - 771
Target Start/End: Original strand, 45721179 - 45721320
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||||||  ||| ||||||  || ||||||| ||||  |  ||||| |||||||||||||||||||||| ||||  ||||     
T  45721179 ttaagtttctaaggtttcagatatgtccttt-aagtttcgagcttgtttcggatagatcatttaagtttctaaggtttcagataggtcctttaagtttcg 45721277  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| ||||| ||| ||||||| |||||||||||||||    
T  45721278 agtttgtttcagataagtcttttctattaacctccgttaagcc 45721320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 657 - 771
Target Start/End: Original strand, 49588078 - 49588192
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatc 756  Q
    ||||||||||  |||||||||| |||| || |||||| ||||||||||||||||||| || ||||  || ||||||| |||  |||| ||| ||||| ||    
T  49588078 ttttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagatagatcctttaagttccaagtttgtttcggataagtcatttctgtc 49588177  T
Q  757 aacctccgttaagcc 771  Q
    |||||||||||||||    
T  49588178 aacctccgttaagcc 49588192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 15615269 - 15615382
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  | |||||||| |||| || |||||| |||||||||||||| |||| || ||||  |||| ||||| ||| |||||||||||||||| ||    
T  15615269 tttaagtttcgattttgtttcggataggtcctttaagtttctaaggtttcaaatagatcctttaagtttcgagtttgtttcagataggtcctttctaaca 15615368  T
Q  758 acctccgttaagcc 771  Q
    |||| |||||||||    
T  15615369 accttcgttaagcc 15615382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 657 - 758
Target Start/End: Complemental strand, 15615493 - 15615392
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatc 756  Q
    ||||||||||  ||||||||||||||| || |||||| |||||||||||||||||| ||| ||||  |||| ||||| ||| ||||| ||| ||||||||    
T  15615493 ttttaagtttcgagtttgtttcagataggtcctttaagtttctaaggtttcagatatgtcctttaagtttcgagtttgtttcagataagtcatttctatc 15615394  T
Q  757 aa 758  Q
    ||    
T  15615393 aa 15615392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 39834008 - 39834101
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||||||| || |||||| |||||||||||||||||| ||| ||||  |||| ||||| |||| ||||||||||||    
T  39834008 tttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcagataagtcctttaagtttcgagtttgttttggataggtccttt 39834101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 45721559 - 45721446
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||||||||||||  ||||| |||||||||||||| ||||||| ||||  |||| ||||| |||   ||||| ||||| | |||    
T  45721559 tttaagtttcacgtttgtttcagatatgtcttttaagtttctaaggtttcatataggtcctttaagtttcgagtttgtttcgtataggccctttatgtca 45721460  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  45721459 acctccgttaagcc 45721446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 1102678 - 1102778
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  ||||||||||||||| |  |||||| |||||||| ||||||||||||| ||||  |||| ||||||||| ||||| ||| |||||||||    
T  1102678 tttaagtttcgagtttgtttcagataggccctttaagtttctaagatttcagataggtcctttaagtttcgagtttatttcagataagtcatttctatca 1102777  T
Q  758 a 758  Q
    |    
T  1102778 a 1102778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 18088087 - 18088187
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||||||||  | |||||| |||||||||||||||||||||  ||||  |||| ||||| ||| ||||||||| |||||||||    
T  18088087 tttaagttttgagtttgtttcagatagatcctttaagtttctaaggtttcagataggtactttaagtttcgagtttgtttcagataggtcatttctatca 18088186  T
Q  758 a 758  Q
    |    
T  18088187 a 18088187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 658 - 721
Target Start/End: Original strand, 5739392 - 5739455
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | ||||||||||||||||| |||||| |||||||||||||||||||||| ||||    
T  5739392 tttaagtttcacgtttgtttcagatatgtcctttaagtttctaaggtttcagataggtccttta 5739455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 623 - 758
Target Start/End: Original strand, 29386128 - 29386263
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttag 722  Q
    ||||| |||||||| ||| |||| | ||| ||  ||||||||||  |||||||||| |||| ||  ||||| |||||||||||||||||||||| ||||     
T  29386128 ggtcctttaagtttataaagtttcagataagtccttttaagtttcgagtttgtttcggataggtcatttaagtttctaaggtttcagataggtcctttaa 29386227  T
Q  723 atttcaagtttattttagataggtcctttctatcaa 758  Q
     |||| ||||| ||| ||||| | ||||||||||||    
T  29386228 gtttcgagtttgtttcagataagccctttctatcaa 29386263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 623 - 758
Target Start/End: Original strand, 39834034 - 39834168
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttag 722  Q
    ||||| ||||||||||||||||| | ||| ||   |||||||||  |||||||||  |||| || |||||| ||| ||| |||||||||| ||| ||||     
T  39834034 ggtcctttaagtttctaaggtttcagataagt-cctttaagtttcgagtttgttttggataggtcctttaagtttttaaagtttcagatatgtcctttaa 39834132  T
Q  723 atttcaagtttattttagataggtcctttctatcaa 758  Q
     |||| ||||| ||||||||||||||||||||||||    
T  39834133 gtttcgagtttgttttagataggtcctttctatcaa 39834168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 658 - 768
Target Start/End: Complemental strand, 3339237 - 3339128
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| |  ||||||||||||| | ||||||| ||||||| |||||| ||||||| ||||  |||| ||||| ||| ||||||||| ||||| |||    
T  3339237 tttaagtttcacttttgtttcagata-gatctttaagtttctaatgtttcaaataggtcctttaagtttcgagtttgtttcagataggtcgtttctgtca 3339139  T
Q  758 acctccgttaa 768  Q
    |||||||||||    
T  3339138 acctccgttaa 3339128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 658 - 768
Target Start/End: Complemental strand, 4965146 - 4965036
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||| |||||  |  ||||| |||||||||||||||||||||| |||| ||||  ||||| ||| |||||| || |||||||||    
T  4965146 tttaagtttcatgtttgttttagatagatcatttaagtttctaaggtttcagataggtcttttaaattttgagtttgtttcagatagatcatttctatca 4965047  T
Q  758 acctccgttaa 768  Q
    |||||| ||||    
T  4965046 acctccattaa 4965036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 629 - 758
Target Start/End: Complemental strand, 4765154 - 4765026
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| ||||| ||  ||| ||||||  |||||||||| ||||||| |||||| |||||||| ||||||||||||  ||||  ||||     
T  4765154 ttaagtttctaaggttttaaataggttcttt-aagtttcgagtttgtttcggatatgtcctttaagtttctaagatttcagataggttctttaagtttcg 4765056  T
Q  729 agtttattttagataggtcctttctatcaa 758  Q
    ||||| ||| |||||  |||||| ||||||    
T  4765055 agtttgtttcagataaatcctttttatcaa 4765026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 47824481 - 47824592
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||||||| | || |||||| ||| |||||||||||||||||| ||||  ||||||||||  ||| |||| ||||||||| |||    
T  47824481 tttaagtttcacgtttgtttcagaaaggt-ctttaagtttttaaggtttcagataggtcctttaagtttcaagttt-gtttcgatatgtcctttctgtca 47824578  T
Q  758 acctccgttaagcc 771  Q
    || |||||||||||    
T  47824579 acatccgttaagcc 47824592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 658 - 721
Target Start/End: Original strand, 41810745 - 41810808
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | |||||||||||||| ||| ||||| |||||||||||||||||||||| ||||    
T  41810745 tttaagtttcacgtttgtttcagataggttatttaagtttctaaggtttcagataggtccttta 41810808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 629 - 768
Target Start/End: Original strand, 43142663 - 43142801
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||||||  ||||||||||  |||||||||| ||||  |  ||||| |||||||||| ||||||| ||| ||||  ||||     
T  43142663 ttaagtttctaaggtttcagatatgtt-ttttaagtttcgagtttgtttcggatagatcttttaagtttctaaggtgtcagatatgtcctttaagtttcg 43142761  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaa 768  Q
    ||||||||| |||||  |  ||||||| ||||||||||||    
T  43142762 agtttatttcagataaataatttctattaacctccgttaa 43142801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 658 - 716
Target Start/End: Complemental strand, 49588399 - 49588340
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttc-tttaaatttctaaggtttcagataggtc 716  Q
    ||||||||| ||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  49588399 tttaagtttcaagtttgtttcagatatgtccttttaagtttctaaggtttcagataggtc 49588340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 689 - 751
Target Start/End: Complemental strand, 43142943 - 43142881
Alignment:
Q  689 tttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||||||||||||||||||  ||||||| ||||| ||||| ||| |||||||||||||    
T  43142943 tttaaatttctaaggtttcagatacatcatttaaatttcgagtttgtttcagataggtccttt 43142881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 1695725 - 1695818
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| ||||||||||||||||| |||| ||||  ||| |||||| ||| | |||||||||||    
T  1695725 tttaagttttatgtttgtttcagatagatcctttaagtttctaaggtttcagattggtcctttaagtttgaagtttgtttcaaataggtccttt 1695818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 657 - 758
Target Start/End: Complemental strand, 5739578 - 5739477
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatc 756  Q
    |||||||||| | ||||||||||||||  |  ||||| |||||||||||||||||||||  ||||  |||| ||||| ||| |||||| || ||||||||    
T  5739578 ttttaagtttcacgtttgtttcagatagatcttttaagtttctaaggtttcagataggttctttaagtttcgagtttgtttcagatagatcatttctatc 5739479  T
Q  757 aa 758  Q
    ||    
T  5739478 aa 5739477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 42371407 - 42371520
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| |  ||||||||||||| |  |||||| ||||||| |||| ||||| ||| ||||  |||| ||||| |||| |||||||| ||||| |||    
T  42371407 tttaagtttcacatttgtttcagataggacctttaattttctaatgttttagataagtcctttaagtttcgagtttgttttggataggtcatttctgtca 42371506  T
Q  758 acctccgttaagcc 771  Q
    ||||| ||||||||    
T  42371507 acctcggttaagcc 42371520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 29987281 - 29987381
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| |  ||||||  || |||||||||||||||||| ||||  |||| ||||| ||| ||||||||| |||||||||    
T  29987281 tttaagtttcgagtttgtttcggataggccctttaagcttttaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtcatttctatca 29987380  T
Q  758 a 758  Q
    |    
T  29987381 a 29987381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 658 - 769
Target Start/End: Original strand, 18030271 - 18030381
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| || |||||| |||||||||||||| ||||||| ||||  |||  ||||| | |  |||||||||||||| |||    
T  18030271 tttaagtttcgagtttgtttcggataggt-ctttaagtttctaaggtttcaaataggtcctttaagttttgagtttgtgtcggataggtcctttctgtca 18030369  T
Q  758 acctccgttaag 769  Q
    ||||| ||||||    
T  18030370 acctctgttaag 18030381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 629 - 771
Target Start/End: Original strand, 5277342 - 5277483
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    |||||||||| |||||| | ||| ||  ||||||||||   ||||||||| ||||  | |||||| ||||||||||| | |||||||| ||||  |||      
T  5277342 ttaagtttctgaggtttcagataggtccttttaagttttgtgtttgtttcggatagatcctttaagtttctaaggttcccgataggtc-tttaagttttg 5277440  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| |||||||| | || ||||||||||||| |||||||||    
T  5277441 agtttgttttagattgatcttttctatcaaccttcgttaagcc 5277483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 716
Target Start/End: Complemental strand, 38823763 - 38823705
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtc 716  Q
    |||||||||  |||||||||| |||| || |||||| ||||||||||||||||||||||    
T  38823763 tttaagtttagagtttgtttcggataggtcctttaagtttctaaggtttcagataggtc 38823705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 715
Target Start/End: Complemental strand, 4765186 - 4765129
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggt 715  Q
    ||||||||| | |||||||||||||| ||||||||| |||||||||||| | ||||||    
T  4765186 tttaagtttcacgtttgtttcagataggttctttaagtttctaaggttttaaataggt 4765129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 670 - 751
Target Start/End: Original strand, 4974854 - 4974935
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||||||||  | |||||| |||||||||||| ||||||||| ||||  ||| |||||| |||  ||||||||||||    
T  4974854 gtttgtttcagatagatcctttaagtttctaaggttttagataggtcctttaagtttgaagtttgtttcggataggtccttt 4974935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 669 - 758
Target Start/End: Complemental strand, 43142903 - 43142814
Alignment:
Q  669 agtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaa 758  Q
    ||||||||||||||| || |||||| |||||||| ||||||||||||| |||   |||  ||||| |||  |||||||| ||||||||||    
T  43142903 agtttgtttcagataggtcctttaagtttctaagatttcagataggtcctttgagtttagagtttgtttcggataggtcttttctatcaa 43142814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 703 - 771
Target Start/End: Original strand, 48074130 - 48074198
Alignment:
Q  703 gtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    |||||||||||||| ||||  |||| ||||| |||  |||||||| ||||| |||||||||||||||||    
T  48074130 gtttcagataggtcctttaagtttcgagtttgtttcggataggtcatttctgtcaacctccgttaagcc 48074198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 688 - 751
Target Start/End: Complemental strand, 1102932 - 1102869
Alignment:
Q  688 ctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    |||||| |||||||||||||||||||||| ||||  ||| |||||| |||  ||||||||||||    
T  1102932 ctttaagtttctaaggtttcagataggtcttttaagtttgaagtttgtttcggataggtccttt 1102869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 713
Target Start/End: Original strand, 29987221 - 29987276
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagatag 713  Q
    ||||||||| | |||||||||||||| || |||||| ||| |||||||||||||||    
T  29987221 tttaagtttcacgtttgtttcagataggtcctttaagtttttaaggtttcagatag 29987276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 721
Target Start/End: Complemental strand, 29987564 - 29987501
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | ||||||||||||||  | |||||| |||||||||||||| ||||||| ||||    
T  29987564 tttaagttttatgtttgtttcagataaatcctttaagtttctaaggtttcaaataggtccttta 29987501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 41542752 - 41542702
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattt 720  Q
    |||||||||||||| ||  ||||| ||||||| ||||||||||||||||||    
T  41542752 gtttgtttcagataggtcatttaactttctaaagtttcagataggtcattt 41542702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 751
Target Start/End: Original strand, 1102630 - 1102711
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    |||||||| ||||| || ||||||||||||||||||||||| | ||  ||||  |||| ||||| ||| ||||||| |||||    
T  1102630 gtttgttttagataggtcctttaaatttctaaggtttcagacatgttctttaagtttcgagtttgtttcagataggcccttt 1102711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 38823823 - 38823730
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| |||| || |||||||||||||| ||||  |||  ||||| |||  ||||||||||||    
T  38823823 tttaagttttatgtttgtttcagatagatcctttaagtttccaaagtttcagataggtcctttaagtttagagtttgtttcggataggtccttt 38823730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 747
Target Start/End: Complemental strand, 39834352 - 39834263
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtc 747  Q
    ||||||||| | |||||||| |||||  |  ||||| ||| |||||||||||||||||| ||||  |||  ||||| |||||||||||||    
T  39834352 tttaagtttcacgtttgttttagatagatcttttaagtttataaggtttcagataggtcctttatgttttgagtttgttttagataggtc 39834263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 48074496 - 48074404
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||||||| || |||||| ||||||| |||| ||||| ||| ||||  |||| ||||| ||| ||||| |||||||    
T  48074496 tttaagttttatgtttgtttcagataggtcctttaagtttctaa-gtttaagataagtcctttaagtttcgagtttgtttcagatatgtccttt 48074404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 718 - 771
Target Start/End: Original strand, 49112936 - 49112989
Alignment:
Q  718 tttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    |||| ||||| ||||| |||| |||||||| ||||| |||||||||||||||||    
T  49112936 tttaaatttcgagtttgttttggataggtcatttctgtcaacctccgttaagcc 49112989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 1e-31; HSPs: 86)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 657 - 771
Target Start/End: Complemental strand, 44318509 - 44318395
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatc 756  Q
    |||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||| ||||  |||| ||||| ||| ||||| ||||||||||||    
T  44318509 ttttaagtttgaagtttgtttcggataggtcctttaaatttctaaggtttcagataggtcctttaagtttcgagtttgtttcagatatgtcctttctatc 44318410  T
Q  757 aacctccgttaagcc 771  Q
    ||||||| |||||||    
T  44318409 aacctccattaagcc 44318395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 1043715 - 1043828
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||||| ||||  |||| ||||| ||| ||||||||| |||||||||    
T  1043715 tttaagtttggagtttgtttcagatatgtcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtcttttctatca 1043814  T
Q  758 acctccgttaagcc 771  Q
    ||||| ||||||||    
T  1043815 acctctgttaagcc 1043828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 629 - 770
Target Start/End: Original strand, 28463854 - 28463994
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| || | |||||||||  |||||||||| |||| || |||||| |||||||||||| ||||||||| ||||  ||||     
T  28463854 ttaagtttctaaggtttcagataagt-actttaagttttgagtttgtttcggataggtcctttaagtttctaaggttttagataggtcttttaagtttcg 28463952  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagc 770  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  28463953 agtttatttcagataggacctttctatcaacctccgttaagc 28463994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 658 - 768
Target Start/End: Complemental strand, 6121938 - 6121828
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | ||||||||||||||||| |||||| |||||||||||| ||||||||||| ||  |||| ||||| ||| ||||||||||||||| |||    
T  6121938 tttaagtttcacgtttgtttcagatatgtcctttaagtttctaaggttttagataggtcatataagtttcgagtttgtttcagataggtcctttctgtca 6121839  T
Q  758 acctccgttaa 768  Q
    |||||||||||    
T  6121838 acctccgttaa 6121828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 657 - 771
Target Start/End: Complemental strand, 15315400 - 15315286
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatc 756  Q
    ||||||||||  |||||||| | |||| || |||||| |||||||||||||||||||||| ||||  |||||||||| ||| ||||| ||||||||||||    
T  15315400 ttttaagtttcgagtttgttacggataagtcctttaagtttctaaggtttcagataggtcctttaagtttcaagtttgtttcagatatgtcctttctatc 15315301  T
Q  757 aacctccgttaagcc 771  Q
    |||||||||||||||    
T  15315300 aacctccgttaagcc 15315286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 657 - 771
Target Start/End: Complemental strand, 15495769 - 15495655
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatc 756  Q
    ||||||||||  |||||||| | |||| || |||||| |||||||||||||||||||||| ||||  |||||||||| ||| ||||| ||||||||||||    
T  15495769 ttttaagtttcgagtttgttacggataagtcctttaagtttctaaggtttcagataggtcctttaagtttcaagtttgtttcagatatgtcctttctatc 15495670  T
Q  757 aacctccgttaagcc 771  Q
    |||||||||||||||    
T  15495669 aacctccgttaagcc 15495655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 9779002 - 9779115
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||||||  ||||| |||||||||||||||||||||| ||||  |||| ||||| ||| |||||||||||||||||||    
T  9779002 tttaagttttgagtttgtttcggatatgtcttttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtcctttctatca 9779101  T
Q  758 acctccgttaagcc 771  Q
    ||||| ||||||||    
T  9779102 acctctgttaagcc 9779115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 658 - 769
Target Start/End: Original strand, 24043808 - 24043919
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||||||||||||||| |||| || |||||| |||||||||||||| ||||||| ||||  |||| ||||| ||| ||||||||| |||||||||    
T  24043808 tttaagtttgaagtttgtttcggataggtcctttaagtttctaaggtttcaaataggtcctttaagtttcgagtttgtttcagataggtcatttctatca 24043907  T
Q  758 acctccgttaag 769  Q
    ||||| ||||||    
T  24043908 acctctgttaag 24043919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 629 - 771
Target Start/End: Original strand, 6986 - 7127
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| ||||| || |||| ||||||  ||||||||||| ||||    ||||| |||||||||||||| ||| ||||||||  ||||     
T  6986 ttaagtttctaaggtttcaaataagtcattt-aagtttcgagtttgtttcaaatattccatttaagtttctaaggtttcacataagtcatttaagtttcg 7084  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||    
T  7085 agtttgtttcagataggtcatttctatcaacctccgttaagcc 7127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 629 - 771
Target Start/End: Original strand, 4157626 - 4157767
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||| |||||||||| |||| || ||||||||||||||||||| |||||| || | ||  ||||     
T  4157626 ttaagtttctaaggtttcagataggt-cctttaagtttggagtttgtttcggataggtcctttaaatttctaaggtttaagatagatcctataagtttcg 4157724  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||||| ||||||||||||||||||| |||||||||||    
T  4157725 agtttgttttaaataggtcctttctatcaacttccgttaagcc 4157767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 629 - 771
Target Start/End: Original strand, 9117551 - 9117692
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||  |||||||||  |||| || |||||| |||||||||||||||||| ||| ||||  ||||     
T  9117551 ttaagtttctaaggtttcagataggt-cctttaagtttcgagtttgttttggataggtcctttaagtttctaaggtttcagatatgtcctttaagtttcg 9117649  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| |||||||||||||||||||||||||||||||||    
T  9117650 agtttgtttcagataggtcctttctatcaacctccgttaagcc 9117692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 610 - 754
Target Start/End: Complemental strand, 7285 - 7141
Alignment:
Q  610 caaatatct-ccggggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttca 708  Q
    ||||||||| || |||||| ||||||||||||||||| ||||| ||  ||| ||||||  |||||||||  ||||||| |||||| ||||||||||||||    
T  7285 caaatatcttcctgggtcctttaagtttctaaggtttcaaataggtccttt-aagtttcgagtttgttttggatatgtcctttaagtttctaaggtttca 7187  T
Q  709 gataggtcatttagatttcaagtttattttagataggtcctttcta 754  Q
    |||||||| ||||  |||| ||||| ||| ||||||||||||||||    
T  7186 gataggtcctttaagtttcgagtttgtttcagataggtcctttcta 7141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 623 - 755
Target Start/End: Complemental strand, 23275483 - 23275352
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttag 722  Q
    ||||| ||||||||||||||||| | ||||||  ||| ||||||  |||||||||| |||| || |||||| |||||||||||||||||||||||||||     
T  23275483 ggtcctttaagtttctaaggtttcagatatgtccttt-aagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcatttaa 23275385  T
Q  723 atttcaagtttattttagataggtcctttctat 755  Q
     |||| ||||| ||| ||||||||| |||||||    
T  23275384 gtttcgagtttgtttcagataggtcatttctat 23275352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 658 - 769
Target Start/End: Complemental strand, 2251139 - 2251028
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||||||||| || |||||| ||||||| |||||||||| ||||||||  |||| ||||| ||| ||||||||| ||||| |||    
T  2251139 tttaagttttacgtttgtttcagataggtcctttaagtttctaaagtttcagataagtcatttacgtttcgagtttgtttcagataggtcatttctgtca 2251040  T
Q  758 acctccgttaag 769  Q
    ||||||||||||    
T  2251039 acctccgttaag 2251028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 658 - 769
Target Start/End: Original strand, 2257071 - 2257182
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||||||||| || |||||| ||||||| |||||||||| ||||||||  |||| ||||| ||| ||||||||| ||||| |||    
T  2257071 tttaagttttacgtttgtttcagataggtcctttaagtttctaaagtttcagataagtcatttacgtttcgagtttgtttcagataggtcatttctgtca 2257170  T
Q  758 acctccgttaag 769  Q
    ||||||||||||    
T  2257171 acctccgttaag 2257182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 669 - 768
Target Start/End: Complemental strand, 42692125 - 42692026
Alignment:
Q  669 agtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaa 768  Q
    |||||||||| || | ||||||||| |||||||||||||||||||||| ||||  |||| ||||| ||||| |||||| |||||||||||||||||||||    
T  42692125 agtttgtttcggacaggttctttaagtttctaaggtttcagataggtcttttaagtttcgagtttgttttatataggttctttctatcaacctccgttaa 42692026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 669 - 771
Target Start/End: Complemental strand, 2257414 - 2257312
Alignment:
Q  669 agtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaa 768  Q
    |||||||||| |||| || || | | ||||||||||||||||| ||||||||| ||||| ||||| | | ||||||||||||||||||||||||||||||    
T  2257414 agtttgtttcggataggtcctgttagtttctaaggtttcagatcggtcatttaaatttcgagtttgtatcagataggtcctttctatcaacctccgttaa 2257315  T
Q  769 gcc 771  Q
    |||    
T  2257314 gcc 2257312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 15891648 - 15891761
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||||||||||||||||||| || |||||| |||||||||||| |||||| || ||||  |||| ||||| ||| ||||| ||| ||| |||||    
T  15891648 tttaagtttgaagtttgtttcagataggtcctttaagtttctaaggttttagatagatcctttaagtttcgagtttgtttcagatatgtcatttttatca 15891747  T
Q  758 acctccgttaagcc 771  Q
    ||||||||| ||||    
T  15891748 acctccgttnagcc 15891761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 27702654 - 27702513
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||  |||||||||| |||  || |||||||||||||||| |||||||||||| ||||  |||      
T  27702654 ttaagtttctaaggtttcagataggt-cctttaagtttcgagtttgtttcggatcggtcctttaaatttctaaggcttcagataggtcttttaagtttgg 27702556  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| ||||| |||||||||||||||||||||||||||    
T  27702555 agtttgtttcagatatgtcctttctatcaacctccgttaagcc 27702513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 31618757 - 31618615
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| ||||| ||  ||||||||||  ||||||||||| ||  || |||||| ||||||| |||| ||||| ||| ||||  ||||     
T  31618757 ttaagtttctaaggtttcaaataggtccttttaagtttcgagtttgtttcaaatgggtcctttaagtttctaaagttttagataagtcctttaagtttcg 31618658  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| |||  | ||||||||||||||||||||||||||||||    
T  31618657 agtttgtttccggtaggtcctttctatcaacctccgttaagcc 31618615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 658 - 758
Target Start/End: Complemental strand, 9117802 - 9117702
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| || |||||| |||||||||||||||||||||| ||||| |||| ||||| ||| || ||||||||||||||||    
T  9117802 tttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaggtttcgagtttgtttcagttaggtcctttctatca 9117703  T
Q  758 a 758  Q
    |    
T  9117702 a 9117702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 23403826 - 23403926
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| || |||||| |||||||||||||||||||||| ||||  |||| ||||| ||| |||||||||||||||||||    
T  23403826 tttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtcctttctatca 23403925  T
Q  758 a 758  Q
    |    
T  23403926 a 23403926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 658 - 768
Target Start/End: Original strand, 29457195 - 29457306
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattt-agatttcaagtttattttagataggtcctttctatc 756  Q
    |||||||||  |||||||||| ||||||| |||||| ||||||||||||||||||| || ||| || |||||||||| ||| | ||||||| ||||||||    
T  29457195 tttaagtttcgagtttgtttcggatatgtcctttaagtttctaaggtttcagatagatcctttaagttttcaagtttgtttcatataggtcttttctatc 29457294  T
Q  757 aacctccgttaa 768  Q
    ||| ||||||||    
T  29457295 aacatccgttaa 29457306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 624 - 758
Target Start/End: Complemental strand, 15891904 - 15891771
Alignment:
Q  624 gtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttaga 723  Q
    |||| ||||||||||||||||| | ||| ||   |||||||||||||||||||||||||| || |||||| |||||||||||| |||||| || ||||      
T  15891904 gtcctttaagtttctaaggtttcagataggt-cctttaagtttgaagtttgtttcagataggtcctttaagtttctaaggttttagatagatcctttaag 15891806  T
Q  724 tttcaagtttattttagataggtcctttctatcaa 758  Q
    |||| ||||| ||| ||||| ||| ||||||||||    
T  15891805 tttcgagtttgtttcagatatgtcatttctatcaa 15891771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 22445002 - 22444861
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||||| ||  ||   |||||||||  |||||||||| |||| || |||||| |||||||||||||||||| ||| ||||  ||||     
T  22445002 ttaagtttctaaggtttaacatgggt-tctttaagttttgagtttgtttcggataggtcctttaagtttctaaggtttcagataagtcctttaagtttcg 22444904  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| ||||| ||||||| | |||||||||||||||||    
T  22444903 agtttgtttcagatatgtcctttttgtcaacctccgttaagcc 22444861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 2250785 - 2250898
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| || || ||| |||||||||||| |||| |||||||||  |||| ||||| | | |||||||||||||||||||    
T  2250785 tttaagtttcgagtttgtttcggataggtcctgtaagtttctaaggttttagatcggtcatttaagtttcgagtttgtatcagataggtcctttctatca 2250884  T
Q  758 acctccgttaagcc 771  Q
    |||| |||||||||    
T  2250885 acctacgttaagcc 2250898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 22444621 - 22444734
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | ||||||||| |||| || |||||| ||||||| |||||||||||||  ||||  |||| ||||| |||  |||||||||||||| |||    
T  22444621 tttaagtttcacgtttgtttcggataggtcctttaagtttctaaagtttcagataggttctttaagtttcgagtttgtttcggataggtcctttctgtca 22444720  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  22444721 acctccgttaagcc 22444734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 670 - 758
Target Start/End: Original strand, 15315188 - 15315276
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaa 758  Q
    ||||||||| |||| || |||||| |||||||||||||||||||||||||||  |||| |||||||||  |||||||| ||||||||||    
T  15315188 gtttgtttcggataggtcctttaagtttctaaggtttcagataggtcatttaagtttcgagtttatttcggataggtcatttctatcaa 15315276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 670 - 758
Target Start/End: Original strand, 15495557 - 15495645
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaa 758  Q
    ||||||||| |||| || |||||| |||||||||||||||||||||||||||  |||| |||||||||  |||||||| ||||||||||    
T  15495557 gtttgtttcggataggtcctttaagtttctaaggtttcagataggtcatttaagtttcgagtttatttcggataggtcatttctatcaa 15495645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 657 - 751
Target Start/End: Original strand, 9117518 - 9117612
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    |||||||||| | ||||||||||||||  | |||||| |||||||||||||||||||||| ||||  |||| ||||| |||| ||||||||||||    
T  9117518 ttttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgttttggataggtccttt 9117612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 31827208 - 31827068
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||  |||||||||  |||| || |||||| |||||||||||||||||||||| ||||  ||||     
T  31827208 ttaagtttctaaggtttcagataggt-cctttaagttttgagtttgttt-ggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcg 31827111  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||||||| | ||| || ||||||||||||||| ||||||||    
T  31827110 agtttatttcaaatatgttctttctatcaacctctgttaagcc 31827068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 11482705 - 11482593
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| |||||||||||||||| ||||||||| ||| ||||| |||||||| ||| ||||  |||| ||||| ||| |||||||||  ||||||||    
T  11482705 tttaagtttcaagtttgtttcagataggttctttaagtttttaagg-ttcagataagtcctttaagtttcgagtttgtttcagataggtctcttctatca 11482607  T
Q  758 acctccgttaagcc 771  Q
    || ||| |||||||    
T  11482606 acttccattaagcc 11482593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 15891931 - 15891838
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| |  ||||||||||||| || |||||| |||||||||||||||||||||| ||||  ||| |||||| ||| |||||||||||||    
T  15891931 tttaagtttaacatttgtttcagatacgtcctttaagtttctaaggtttcagataggtcctttaagtttgaagtttgtttcagataggtccttt 15891838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 29276637 - 29276730
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||||||| || |||||| |||||||||||||||||||||  ||||  |||| ||||| |||| ||||||||||||    
T  29276637 tttaagtttcatgtttgtttcagataggtcctttaagtttctaaggtttcagataggttctttaagtttcgagtttgttttggataggtccttt 29276730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 31618374 - 31618487
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||||||||| || ||||||||||||||||||||| ||| ||| ||||  |||| ||||| |||   ||||||||||| | |||    
T  31618374 tttaagtttcacgtttgtttcagataggtcctttaaatttctaaggtttcaaataagtcctttaagtttcgagtttgtttggaataggtcctttttgtca 31618473  T
Q  758 acctccgttaagcc 771  Q
    | ||||||||||||    
T  31618474 atctccgttaagcc 31618487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 31826850 - 31826963
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||| ||| ||||| || |||||| |||||||||||||||||||||| ||||  |||| ||||| |||  |||| |||| ||||||||    
T  31826850 tttaagtttcacgtttattttagataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggatatgtccattctatca 31826949  T
Q  758 acctccgttaagcc 771  Q
    || |||||||||||    
T  31826950 acatccgttaagcc 31826963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 44728126 - 44728219
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| |||||||||||||||| ||||| ||||  ||||||||||||||  ||||||||||||    
T  44728126 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagacaggtcctttaagtttcaagtttatttcggataggtccttt 44728219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 658 - 758
Target Start/End: Complemental strand, 9779225 - 9779125
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||| ||||| || |||||| ||| |||||||||||||||||| ||||  |||| ||||| ||| |||||| ||||||||||||    
T  9779225 tttaagtttcatgtttgttttagataggtcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcagatagatcctttctatca 9779126  T
Q  758 a 758  Q
    |    
T  9779125 a 9779125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 658 - 769
Target Start/End: Complemental strand, 15300952 - 15300841
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttc-tttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatc 756  Q
    |||||||||  |||||||||| |||| |||| ||||| |||||||||||||||||||||| ||||  |||  ||||| ||| ||||||||  ||||||||    
T  15300952 tttaagtttcgagtttgtttcggata-gttcatttaagtttctaaggtttcagataggtcctttaagttttgagtttgtttcagataggttatttctatc 15300854  T
Q  757 aacctccgttaag 769  Q
    |||||||||||||    
T  15300853 aacctccgttaag 15300841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 658 - 769
Target Start/End: Complemental strand, 15481321 - 15481210
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttc-tttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatc 756  Q
    |||||||||  |||||||||| |||| |||| ||||| |||||||||||||||||||||| ||||  |||  ||||| ||| ||||||||  ||||||||    
T  15481321 tttaagtttcgagtttgtttcggata-gttcatttaagtttctaaggtttcagataggtcctttaagttttgagtttgtttcagataggttatttctatc 15481223  T
Q  757 aacctccgttaag 769  Q
    |||||||||||||    
T  15481222 aacctccgttaag 15481210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 688 - 771
Target Start/End: Complemental strand, 35236854 - 35236771
Alignment:
Q  688 ctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    |||||| |||||||||||||| ||||||||||||  ||||||||||||||  |||| ||  ||||| |||||||||||||||||    
T  35236854 ctttaagtttctaaggtttcaaataggtcatttaagtttcaagtttatttcggataagttatttctgtcaacctccgttaagcc 35236771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 35435638 - 35435498
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||  |||||||||| ||||||| |||||| ||||||| ||||||||||| || ||||  ||||     
T  35435638 ttaagtttctaaggttttagataggt-cctttaagtttcgagtttgtttcggatatgtcctttaagtttctaatgtttcagatagatcctttaattttcg 35435540  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| ||||||||| ||| ||||||||||  |||||||    
T  35435539 agtttgtttcagataggtcattt-tatcaacctctattaagcc 35435498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 670 - 768
Target Start/End: Original strand, 42620485 - 42620583
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaa 768  Q
    ||||||||||||||||| |||||| ||| |||| ||||||||| ||| |||| ||||||||||| ||| | |||| || ||||| ||||| ||||||||    
T  42620485 gtttgtttcagatatgtcctttaagtttttaagatttcagataagtcctttaaatttcaagtttgtttcaaatagatcatttctgtcaacatccgttaa 42620583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 629 - 758
Target Start/End: Original strand, 35435360 - 35435488
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||  | |||||||||||||  |  ||||| |||||||||||||||||||||| ||||  ||||     
T  35435360 ttaagtttctaaggtttcagataggt-cctttaagtttcgaatttgtttcagatagatcttttaagtttctaaggtttcagataggtcctttaagtttcg 35435458  T
Q  729 agtttattttagataggtcctttctatcaa 758  Q
    ||||| ||| ||||| ||||||||||||||    
T  35435459 agtttgtttcagataagtcctttctatcaa 35435488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 29218421 - 29218521
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||||||||||||||| |||| || |||||||||| |||||||| | ||||||| ||||  |||| ||||| ||| |||||| || ||| |||||    
T  29218421 tttaagtttgaagtttgtttcggataggtcctttaaatttttaaggttttatataggtcctttaagtttcgagtttgtttcagatagatcatttttatca 29218520  T
Q  758 a 758  Q
    |    
T  29218521 a 29218521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 688 - 768
Target Start/End: Original strand, 1691934 - 1692016
Alignment:
Q  688 ctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttag--ataggtcctttctatcaacctccgttaa 768  Q
    |||||| |||||||||||||||||||||||||||  |||| ||||| ||| ||  ||| ||| ||||||||||||||||||||    
T  1691934 ctttaagtttctaaggtttcagataggtcatttaagtttcgagtttgtttcagatatatgtcatttctatcaacctccgttaa 1692016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 629 - 766
Target Start/End: Original strand, 38507111 - 38507248
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttcttt-aaatttctaaggtttcagataggtcatttagatttc 727  Q
    ||||||||||||| ||| | ||| || |||| ||||||  |||||||||  |||| || |||| |||||||||||||||||||||| || ||||  ||||    
T  38507111 ttaagtttctaagattttagataggtcattt-aagtttcgagtttgttttggataggtccttttaaatttctaaggtttcagatagatcctttaagtttc 38507209  T
Q  728 aagtttattttagataggtcctttctatcaacctccgtt 766  Q
     ||||| ||| ||||| ||||||| ||| ||||||||||    
T  38507210 gagtttgtttcagataagtcctttatattaacctccgtt 38507248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 688 - 758
Target Start/End: Original strand, 42691943 - 42692013
Alignment:
Q  688 ctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaa 758  Q
    |||||| |||||||||||| ||||||||| ||||  |||| ||||| ||||||||||||| ||||||||||    
T  42691943 ctttaagtttctaaggttttagataggtcctttaagtttcgagtttgttttagataggtcatttctatcaa 42692013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 623 - 758
Target Start/End: Complemental strand, 4157907 - 4157777
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttag 722  Q
    ||||| |||||||| |||||||| | ||||||  ||| ||||||  |||||||||  ||||||| |||||| |||||||||||||||||| ||||   ||    
T  4157907 ggtcctttaagtttttaaggtttcagatatgttcttt-aagtttcgagtttgtttgggatatgtcctttaagtttctaaggtttcagatatgtca---ag 4157812  T
Q  723 atttcaagtttattttagataggtcctttctatcaa 758  Q
     |||||||||| ||| ||||||||| || |||||||    
T  4157811 -tttcaagtttgtttcagataggtcattgctatcaa 4157777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 23275509 - 23275416
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||| ||| || |||||| |||||||||||||||||| ||| ||||  |||| ||||| |||  ||||||||||||    
T  23275509 tttaagtttaacgtttgtttcatataggtcctttaagtttctaaggtttcagatatgtcctttaagtttcgagtttgtttcggataggtccttt 23275416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 623 - 751
Target Start/End: Original strand, 23403731 - 23403859
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaagg-tttcagataggtcattta 721  Q
    ||||| |||||||||||| |||| | ||||||  ||| ||||||  |||||||||| |||| || |||||| ||||||||| ||||||||||||| ||||    
T  23403731 ggtcctttaagtttctaaagtttcagatatgtccttt-aagtttcgagtttgtttcggataggtcctttaagtttctaaggttttcagataggtccttta 23403829  T
Q  722 gatttcaagtttattttagataggtccttt 751  Q
      |||| ||||| |||  ||||||||||||    
T  23403830 agtttcgagtttgtttcggataggtccttt 23403859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 27702686 - 27702593
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| |||||||||||||||||||||| ||||  |||| ||||| |||  ||| ||||||||    
T  27702686 tttaagtttcatgtttgtttcagatagctcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggatcggtccttt 27702593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 29218361 - 29218454
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| ||| |||||||||||||||||| ||||  ||| |||||| |||  ||||||||||||    
T  29218361 tttaagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcctttaagtttgaagtttgtttcggataggtccttt 29218454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 29276909 - 29276796
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| ||||  |||||||||| |   ||||| ||||||| |||||||||| ||| ||||  |||  ||||| ||| ||||||||| |||||||||    
T  29276909 tttaagtttcaagtaggtttcagataagacttttaagtttctaaagtttcagatatgtcctttaagttttgagtttgtttcagataggtcatttctatca 29276810  T
Q  758 acctccgttaagcc 771  Q
    || |||||||||||    
T  29276809 acttccgttaagcc 29276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 731
Target Start/End: Complemental strand, 29276969 - 29276896
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagt 731  Q
    ||||||||| | |||| |||||||||||| |||||| ||||||||||||||||||| || ||||  ||||||||    
T  29276969 tttaagttttacgtttatttcagatatgtcctttaagtttctaaggtttcagatagatcctttaagtttcaagt 29276896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 38507079 - 38507172
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||| |||||||  | |||||| |||||||| ||| ||||||||||||||  |||| ||||| |||| ||||||||||||    
T  38507079 tttaagtttcatgtttgtctcagatagatcctttaagtttctaagattttagataggtcatttaagtttcgagtttgttttggataggtccttt 38507172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 629 - 741
Target Start/End: Complemental strand, 24469524 - 24469414
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||| |||||||||| |||| || |||||| ||| |||||||||||||| ||| ||||  |||||    
T  24469524 ttaagtttctaaggtttcagataggt-cctttaagtttggagtttgtttcggataggtcctttaagtttttaaggtttcagatatgtc-tttaagtttca 24469427  T
Q  729 agtttattttaga 741  Q
    ||||| |||||||    
T  24469426 agtttgttttaga 24469414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 27702403 - 27702503
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||| ||| |||| || |||||  |||||||||||||||||||||| ||||  |||| ||||| ||| ||||| ||| |||||||||    
T  27702403 tttaagttttgagtttggttcggataggtactttatgtttctaaggtttcagataggtcctttaagtttcgagtttgtttaagatatgtcatttctatca 27702502  T
Q  758 a 758  Q
    |    
T  27702503 a 27702503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 724 - 771
Target Start/End: Original strand, 11482419 - 11482466
Alignment:
Q  724 tttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| |||| ||||||||||||| |||||||||||||||||||||||    
T  11482419 tttcacgtttgttttagataggtcatttctatcaacctccgttaagcc 11482466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 658 - 768
Target Start/End: Original strand, 15300598 - 15300709
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaa-tttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatc 756  Q
    ||||||||| | |||||||||||||| || |||| || ||||||| |||| ||||||||| ||||  |||| ||||| |||  |||||||| ||| | ||    
T  15300598 tttaagtttcatgtttgtttcagataggtccttttaagtttctaaagttttagataggtcctttaagtttcgagtttgtttcggataggtcttttttgtc 15300697  T
Q  757 aacctccgttaa 768  Q
    ||||||||||||    
T  15300698 aacctccgttaa 15300709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 658 - 768
Target Start/End: Original strand, 15480967 - 15481078
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaa-tttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatc 756  Q
    ||||||||| | |||||||||||||| || |||| || ||||||| |||| ||||||||| ||||  |||| ||||| |||  |||||||| ||| | ||    
T  15480967 tttaagtttcatgtttgtttcagataggtccttttaagtttctaaagttttagataggtcctttaagtttcgagtttgtttcggataggtcttttttgtc 15481066  T
Q  757 aacctccgttaa 768  Q
    ||||||||||||    
T  15481067 aacctccgttaa 15481078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 658 - 721
Target Start/End: Complemental strand, 31827240 - 31827177
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | ||||||||||||||  || ||||| |||||||||||||||||||||| ||||    
T  31827240 tttaagtttcatgtttgtttcagatagattttttaagtttctaaggtttcagataggtccttta 31827177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 716
Target Start/End: Original strand, 22780077 - 22780135
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtc 716  Q
    ||||||||| | ||||||||||||||  | |||||| ||||||||||||||||||||||    
T  22780077 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtc 22780135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 721
Target Start/End: Original strand, 29276663 - 29276760
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||| ||||||||||||||||| | ||| ||   |||||||||  |||||||||  |||| || |||||| |||||||||||||||||||||| ||||    
T  29276663 ggtcctttaagtttctaaggtttcagataggt-tctttaagtttcgagtttgttttggataggtcctttaagtttctaaggtttcagataggtccttta 29276760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 689 - 771
Target Start/End: Complemental strand, 42620775 - 42620693
Alignment:
Q  689 tttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| ||||||||||||| |||| ||||  |||| ||| | ||| ||||| ||||||||| |||||||||||||||||    
T  42620775 tttaagtttttaaggtttcagattggtcctttaagtttcgagtatgtttcagataagtcctttctgtcaacctccgttaagcc 42620693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 768
Target Start/End: Complemental strand, 44728475 - 44728365
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||||||| | || |||||| ||| ||||||||||||||| |  ||||  |||| ||||| |||  ||||| |||||| | |||    
T  44728475 tttaagtttcacgtttgtttcagacaagtcctttaagtttttaaggtttcagatagattctttaagtttcgagtttgtttcggatagatcctttttgtca 44728376  T
Q  758 acctccgttaa 768  Q
    |||||||||||    
T  44728375 acctccgttaa 44728365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 671 - 772
Target Start/End: Complemental strand, 1692247 - 1692146
Alignment:
Q  671 tttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagc 770  Q
    |||||| || ||| || |||||| ||| |||||||||||||| ||| ||||  |||| ||||| |||| |||||||| ||||| |||||||| |||| ||    
T  1692247 tttgttccaaataggtcctttaagtttataaggtttcagatatgtcctttaagtttcgagtttgttttggataggtcatttctgtcaacctctgttaggc 1692148  T
Q  771 ct 772  Q
    ||    
T  1692147 ct 1692146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 4157594 - 4157687
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||| |||||||||  | |||||| |||||||||||||||||||||| ||||  |||  ||||| |||  ||||||||||||    
T  4157594 tttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttggagtttgtttcggataggtccttt 4157687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 9117862 - 9117769
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| |  ||||||||||||| || |||||| |||||||| ||||||||| ||| ||||  |||| ||||| |||  ||||||||||||    
T  9117862 tttaagtttcacatttgtttcagataggtcctttaagtttctaagctttcagataagtcctttaagtttcgagtttgtttcggataggtccttt 9117769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 15315117 - 15315209
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||||||| || ||||||| ||||||||||||||||| ||| ||||  ||||  |||| |||  ||||||||||||    
T  15315117 tttaagtttcacgtttgtttcagataggtcctttaaa-ttctaaggtttcagataagtcctttaagtttcgtgtttgtttcggataggtccttt 15315209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 15495486 - 15495578
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||||||| || ||||||| ||||||||||||||||| ||| ||||  ||||  |||| |||  ||||||||||||    
T  15495486 tttaagtttcacgtttgtttcagataggtcctttaaa-ttctaaggtttcagataagtcctttaagtttcgtgtttgtttcggataggtccttt 15495578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 15891588 - 15891681
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| |  |||||||||||||  | ||| || |||||||||||||||| ||||| ||||  ||| |||||| ||| |||||||||||||    
T  15891588 tttaagtttcatatttgtttcagatagatccttaaagtttctaaggtttcagacaggtcctttaagtttgaagtttgtttcagataggtccttt 15891681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 23403705 - 23403798
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||| ||| || |||||| ||||||| |||||||||| ||| ||||  |||| ||||| |||  ||||||||||||    
T  23403705 tttaagtttaacgtttgtttcaaataggtcctttaagtttctaaagtttcagatatgtcctttaagtttcgagtttgtttcggataggtccttt 23403798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 24043748 - 24043841
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| ||| |||||||| ||||||||| ||||  ||| |||||| |||  ||||||||||||    
T  24043748 tttaagtttcatgtttgtttcagatagatcctttaagtttttaaggttttagataggtcctttaagtttgaagtttgtttcggataggtccttt 24043841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 670 - 751
Target Start/End: Complemental strand, 24469544 - 24469463
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||||||||  | |||||| |||||||||||||||||||||| ||||  |||  ||||| |||  ||||||||||||    
T  24469544 gtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttggagtttgtttcggataggtccttt 24469463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 35435670 - 35435577
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| |||||||||||| ||||||||| ||||  |||| ||||| |||  |||| |||||||    
T  35435670 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggttttagataggtcctttaagtttcgagtttgtttcggatatgtccttt 35435577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 669 - 721
Target Start/End: Complemental strand, 23404097 - 23404045
Alignment:
Q  669 agtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    |||||||||| |||| || ||||||||||||||||| ||||||||||| ||||    
T  23404097 agtttgtttcggataggtcctttaaatttctaaggtgtcagataggtccttta 23404045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 660 - 716
Target Start/End: Complemental strand, 31618787 - 31618731
Alignment:
Q  660 taagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtc 716  Q
    ||||||| ||||||||||||||||  | |||||| |||||||||||||| |||||||    
T  31618787 taagtttcaagtttgtttcagatagatcctttaagtttctaaggtttcaaataggtc 31618731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 721
Target Start/End: Original strand, 6954 - 7017
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | ||||||||||||||| |  ||||| |||||||||||||| ||| ||||||||    
T  6954 tttaagtttcatgtttgtttcagatatatcttttaagtttctaaggtttcaaataagtcattta 7017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 658 - 712
Target Start/End: Original strand, 28463822 - 28463876
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagata 712  Q
    ||||||||| | ||||||||||||||  | |||||| ||||||||||||||||||    
T  28463822 tttaagtttcatgtttgtttcagataaatcctttaagtttctaaggtttcagata 28463876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 674 - 716
Target Start/End: Complemental strand, 38507316 - 38507274
Alignment:
Q  674 gtttcagatatgttctttaaatttctaaggtttcagataggtc 716  Q
    |||||||||| ||||||||| |||||||||||||| |||||||    
T  38507316 gtttcagataggttctttaagtttctaaggtttcatataggtc 38507274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 758
Target Start/End: Complemental strand, 1043965 - 1043838
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||  |||||||||| ||||||| |||||| |||||||| ||| ||||||  | ||||  ||||     
T  1043965 ttaagtttctaaggtttcagataggt-cctttaagtttcgagtttgtttcggatatgtcctttaagtttctaagattttagatagaccttttaagtttcg 1043867  T
Q  729 agtttattttagataggtcctttctatcaa 758  Q
    |||||  |||||||| ||| ||||||||||    
T  1043866 agttt-gtttagataagtcttttctatcaa 1043838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 1043997 - 1043904
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||  |||| ||  ||||| |||||||||||||||||||||| ||||  |||| ||||| |||  |||| |||||||    
T  1043997 tttaagtttaacgtttgttttcgataagtcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggatatgtccttt 1043904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 715
Target Start/End: Original strand, 6121524 - 6121581
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggt 715  Q
    ||||||||| | |||||||| |||||  | |||||| |||||||||||||||||||||    
T  6121524 tttaagtttcatgtttgttttagatagatcctttaagtttctaaggtttcagataggt 6121581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 23404168 - 23404075
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||| |||||||  | |||||| || ||||||||||||||| ||  |||| ||||| ||||| |||  ||||||||||||    
T  23404168 tttaagtttcatgtttgtctcagatagatcctttaagttactaaggtttcagatatgttctttaaatttcgagtttgtttcggataggtccttt 23404075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 715
Target Start/End: Original strand, 29457135 - 29457192
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggt 715  Q
    ||||||||| | |||||||||||||| ||  ||||| |||||||| ||||||||||||    
T  29457135 tttaagtttcatgtttgtttcagataggtcttttaagtttctaagatttcagataggt 29457192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 1e-31; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 669 - 771
Target Start/End: Original strand, 45443263 - 45443365
Alignment:
Q  669 agtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaa 768  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||| ||||  |||| ||||| ||| ||||||||||||||||||||||||||||||    
T  45443263 agtttgtttcggatatgttctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtcctttctatcaacctccgttaa 45443362  T
Q  769 gcc 771  Q
    |||    
T  45443363 gcc 45443365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 629 - 770
Target Start/End: Original strand, 29036174 - 29036315
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||| ||||||| | ||| ||  ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||  |||   ||||     
T  29036174 ttaagtttcaaaggttttagataagtccttttaagtttgaagtttgtttaagataggttctttaagtttctaaggtttcaggtaggttctttgagtttcg 29036273  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagc 770  Q
    ||||| ||| ||||||||||||||||||||||||||||||||    
T  29036274 agtttgtttcagataggtcctttctatcaacctccgttaagc 29036315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 658 - 770
Target Start/End: Complemental strand, 9907773 - 9907661
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||||||||| |||| |||| || |||||| |||||||||||||||||||||| ||||  |||| ||||| ||| ||||||||| |||||||||    
T  9907773 tttaagtttgaagtttatttcggataagtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtcatttctatca 9907674  T
Q  758 acctccgttaagc 770  Q
    |||||||||||||    
T  9907673 acctccgttaagc 9907661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 6723495 - 6723382
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| || |||||| |||||||||||||| ||||||| ||||  |||| ||||| ||| |||||||||||||||||||    
T  6723495 tttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcaaataggtcctttaagtttcgagtttgtttcagataggtcctttctatca 6723396  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  6723395 acctccgttaagcc 6723382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 687 - 771
Target Start/End: Original strand, 35127543 - 35127627
Alignment:
Q  687 tctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    |||||||||||||||||||||||||||||||||||  |||| ||||| ||| |||||||||||||||| ||||||||||||||||    
T  35127543 tctttaaatttctaaggtttcagataggtcatttaagtttcgagtttgtttcagataggtcctttctaacaacctccgttaagcc 35127627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 42430686 - 42430544
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||  |||||||||| |||| || |||||| |||||||||||| ||||||||||||||  ||||     
T  42430686 ttaagtttctaaggtttcagataggt-cctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttaagataggtcatttaagtttcg 42430588  T
Q  729 agtttatttt-agataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||    
T  42430587 agtttgttttcagataggtcctttctatcaacctccattaagcc 42430544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 3173300 - 3173413
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| || |||||| |||||||||||||||||| ||| ||||  |||| ||||| ||| ||||||||| |||||||||    
T  3173300 tttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataagtcctttaagtttcgagtttgtttcagataggtcatttctatca 3173399  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  3173400 acctccgttaagcc 3173413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 22563782 - 22563895
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||| |||||||||| |||| || |||||| |||||||||||||||||| ||| ||||  |||| ||||| ||| ||||| |||||||||||||    
T  22563782 tttaagtttggagtttgtttcggataggtcctttaagtttctaaggtttcagataagtcttttaagtttcgagtttgtttcagatacgtcctttctatca 22563881  T
Q  758 acctccgttaagcc 771  Q
    |||||| |||||||    
T  22563882 acctccattaagcc 22563895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 42759019 - 42759132
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  ||||||||||||||| ||  ||||| |||||||||||||||||||||| ||||  |||| ||||| ||| ||||| |||||||||||||    
T  42759019 tttaagtttcgagtttgtttcagataggtcatttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataagtcctttctatca 42759118  T
Q  758 acctccgttaagcc 771  Q
    |||| |||||||||    
T  42759119 accttcgttaagcc 42759132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 629 - 771
Target Start/End: Original strand, 44941047 - 44941188
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||||| ||| || |||| ||||||||||||| |||| ||||  | |||||| ||||||||||||||||||| || ||||  |||      
T  44941047 ttaagtttctaaggtttaagataagtcattt-aagtttgaagtttatttcggatagatcctttaagtttctaaggtttcagatagatcctttaagttttg 44941145  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| ||||| ||| |||||||||||||||||| ||||    
T  44941146 agtttgtttcagatacgtcatttctatcaacctccgttgagcc 44941188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 18942596 - 18942483
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| ||||||||||| ||||  | |||||| |||||||| ||||||||||||||||||  | || ||||| ||| ||||| || ||||||||||    
T  18942596 tttaagtttcaagtttgtttcggatagatcctttaagtttctaagatttcagataggtcatttaagtctcgagtttctttcagatatgttctttctatca 18942497  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  18942496 acctccgttaagcc 18942483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 629 - 758
Target Start/End: Complemental strand, 42759270 - 42759142
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||  |||||||||| |||| || |||||| |||||||| ||||||||||||| |||| |||||     
T  42759270 ttaagtttctaaggtttcagataggt-tctttaagtttcgagtttgtttcggataagtcctttaagtttctaagatttcagataggtcctttaaatttcg 42759172  T
Q  729 agtttattttagataggtcctttctatcaa 758  Q
    ||||| ||| ||||||||||||||||||||    
T  42759171 agtttgtttcagataggtcctttctatcaa 42759142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 629 - 769
Target Start/End: Complemental strand, 48840305 - 48840166
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| ||||| ||  ||| ||||||  |||||||||| |||| || |||||| |||||||||||| ||||| ||| ||||  ||||     
T  48840305 ttaagtttctaaggtttcaaataggtccttt-aagtttcgagtttgtttcggataggtcctttaagtttctaaggttttagatatgtcctttaagtttcg 48840207  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaag 769  Q
    ||||| ||| |||||||| ||||||||||| ||||||||||    
T  48840206 agtttgtttcagataggttctttctatcaatctccgttaag 48840166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 37043347 - 37043235
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| ||||||||| |||||||||||||||||||||  ||||  |||| ||||| ||| ||||| | ||||||| |||    
T  37043347 tttaagttttgagtttgtttcggataggttctttaagtttctaaggtttcagataggt-ttttaagtttcgagtttgtttcagatatgacctttctgtca 37043249  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  37043248 acctccgttaagcc 37043235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 45203645 - 45203758
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  ||||| |||| ||||  | |||||| |||||||||||||||||||||| ||||  |||| ||||| ||| ||||| |||||||||||||    
T  45203645 tttaagttttgagtttatttcggatagatcctttaagtttctaaggtttcagataggtcttttaagtttcgagtttgtttcagataagtcctttctatca 45203744  T
Q  758 acctccgttaagcc 771  Q
    | ||||||||||||    
T  45203745 aactccgttaagcc 45203758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 45324929 - 45324816
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  ||||||||||||||| || |||||| ||| |||||||||||||| ||  ||||  |||||||||| ||| ||||||||||||||||| |    
T  45324929 tttaagtttcgagtttgtttcagataggtcctttaagtttttaaggtttcagataagttctttaagtttcaagtttgtttcagataggtcctttctatta 45324830  T
Q  758 acctccgttaagcc 771  Q
    || | |||||||||    
T  45324829 acattcgttaagcc 45324816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 674 - 770
Target Start/End: Complemental strand, 3173636 - 3173540
Alignment:
Q  674 gtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagc 770  Q
    |||||||||| || |||||| |||||||||||||||||||||| ||||  |||| ||||| |||  |||||||| ||||| ||||||||||||||||    
T  3173636 gtttcagataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggataggtcatttctgtcaacctccgttaagc 3173540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 623 - 758
Target Start/End: Complemental strand, 22642175 - 22642041
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttag 722  Q
    ||||| ||||||||||||||||| | |||||| | |||||||||  |||||||||| |||| || |||||| ||| |||||||| ||||||||| ||||     
T  22642175 ggtcctttaagtttctaaggtttcagatatgtca-tttaagttttgagtttgtttcggataagtcctttaagtttttaaggttttagataggtcctttaa 22642077  T
Q  723 atttcaagtttattttagataggtcctttctatcaa 758  Q
     |||| ||||| ||| ||||| ||| ||||||||||    
T  22642076 gtttcgagtttgtttcagatatgtcatttctatcaa 22642041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 658 - 758
Target Start/End: Complemental strand, 44449292 - 44449193
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||  ||||| || ||||||||||||||||||| ||||||||| || || |||| ||||| ||||||||||||| |||||||||    
T  44449292 tttaagttttacgtttgttctagataggtcctttaaatttctaaggttttagataggtccttaag-tttcgagtttgttttagataggtcttttctatca 44449194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 658 - 758
Target Start/End: Complemental strand, 45443475 - 45443375
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||| ||||| || |||||| ||| | |||||||||||||||| ||||  |||| ||||| ||||||||||||| |||||||||    
T  45443475 tttaagtttcacgtttgttttagataggtcctttaagtttttgaggtttcagataggtcctttaagtttcgagtttgttttagataggtcatttctatca 45443376  T
Q  758 a 758  Q
    |    
T  45443375 a 45443375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 657 - 760
Target Start/End: Complemental strand, 18808203 - 18808100
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatc 756  Q
    |||||||||| | |||||||| ||||| || |||||  |||||||||||| |||||| || |||| ||||| ||||| ||| ||||||||| ||||||||    
T  18808203 ttttaagtttcacgtttgttttagataggtcctttatgtttctaaggttttagatagatcctttaaatttcgagtttgtttcagataggtcatttctatc 18808104  T
Q  757 aacc 760  Q
    ||||    
T  18808103 aacc 18808100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 623 - 758
Target Start/End: Complemental strand, 22564039 - 22563905
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttag 722  Q
    ||||| ||||||||||||||||| | ||| ||   |||||||||  |||||||||| |||| || |||||| |||||||| ||||||||||||| ||||     
T  22564039 ggtcctttaagtttctaaggtttcagataagt-cctttaagtttcgagtttgtttcggataggtcctttaagtttctaagatttcagataggtcctttaa 22563941  T
Q  723 atttcaagtttattttagataggtcctttctatcaa 758  Q
     |||| ||||| |||  |||| ||||||||||||||    
T  22563940 gtttcgagtttgtttccgatatgtcctttctatcaa 22563905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 658 - 769
Target Start/End: Original strand, 45324577 - 45324687
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||||||||||||  ||||| |||||||||||||||||| ||  ||||  |||||||||| |||| |||| ||||||||| |||    
T  45324577 tttaagttttacgtttgtttcagatatgtcgtttaagtttctaaggtttcagatatgt-ttttaagtttcaagtttgttttggataagtcctttctgtca 45324675  T
Q  758 acctccgttaag 769  Q
    || || ||||||    
T  45324676 acatctgttaag 45324687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 679 - 769
Target Start/End: Original strand, 36986957 - 36987046
Alignment:
Q  679 agatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaag 769  Q
    ||||| ||||||||| ||| ||||||||||||||||||||||| ||||  ||||| |||  |||| ||||||||| |||||||||||||||    
T  36986957 agataggttctttaagtttttaaggtttcagataggtcatttaaattt-gagtttgtttcggatatgtcctttctgtcaacctccgttaag 36987046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 47193565 - 47193424
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||  ||||| |||| ||||  | ||| || |||||||||||| ||||||||| ||||  |||||    
T  47193565 ttaagtttctaaggttttagataggt-cctttaagtttcgagtttatttcggatagatccttcaagtttctaaggttttagataggtcctttaagtttca 47193467  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    | ||| ||| | |||||||||||| ||||||||||||||||||    
T  47193466 aatttgtttcatataggtcctttccatcaacctccgttaagcc 47193424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 629 - 758
Target Start/End: Original strand, 8919539 - 8919667
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   ||||||||| ||||||||||| |||| ||  ||||| ||| |||||||||||||||||| ||||  |||      
T  8919539 ttaagtttctaaggtttcagataggt-cctttaagtttcaagtttgtttcggataggtcttttaagtttttaaggtttcagataggtcctttaagttttg 8919637  T
Q  729 agtttattttagataggtcctttctatcaa 758  Q
    ||||| ||| ||||||||| ||||||||||    
T  8919638 agtttgtttcagataggtcatttctatcaa 8919667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 22564065 - 22563972
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||||||| || |||||| |||||||||||||||||| ||| ||||  |||| ||||| |||  ||||||||||||    
T  22564065 tttaagtttaacgtttgtttcagataggtcctttaagtttctaaggtttcagataagtcctttaagtttcgagtttgtttcggataggtccttt 22563972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 690 - 771
Target Start/End: Original strand, 22641950 - 22642031
Alignment:
Q  690 ttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    |||| |||||||||||||||||||||| ||||  |||| ||||| ||| | ||| |||||||||||||||||| ||||||||    
T  22641950 ttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcatataagtcctttctatcaacctctgttaagcc 22642031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 629 - 758
Target Start/End: Original strand, 30648253 - 30648381
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||  |||||||||| |||| || ||||||  ||||||||||||||||| ||| ||||  ||||     
T  30648253 ttaagtttctaaggtttcatataggt-cctttaagtttcgagtttgtttcggataagtcctttaagcttctaaggtttcagataagtcctttaagtttcg 30648351  T
Q  729 agtttattttagataggtcctttctatcaa 758  Q
    | ||| ||| ||||||||||||||||||||    
T  30648352 attttgtttcagataggtcctttctatcaa 30648381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 37042994 - 37043107
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | ||||||||  ||||  | |||||| ||||||||||||||||||| || ||||  |||| ||||| ||| | | |||||||||| ||||    
T  37042994 tttaagtttcatgtttgtttaggatagatgctttaagtttctaaggtttcagatagatcctttaagtttcgagtttgtttcacacaggtcctttcgatca 37043093  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  37043094 acctccgttaagcc 37043107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 42430718 - 42430625
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| |||||||||||||||||||||| ||||  |||| ||||| |||  ||||||||||||    
T  42430718 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggataggtccttt 42430625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 9907552 - 9907650
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||| |||||||||| ||||||| |||||  ||| |||||||||||||||||| ||||  |||  |||| |||| |||||||||||||||||||    
T  9907552 tttaagtttggagtttgtttcggatatgtcctttagtttt-taaggtttcagataggtcctttaagttttgagtt-atttcagataggtcctttctatca 9907649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 703 - 771
Target Start/End: Complemental strand, 10470862 - 10470794
Alignment:
Q  703 gtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    |||||||||||||| ||||  |||| ||||| |||| |||||||||||||| |||||||||||||||||    
T  10470862 gtttcagataggtcctttaactttcgagtttgttttggataggtcctttctgtcaacctccgttaagcc 10470794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 657 - 716
Target Start/End: Complemental strand, 35127798 - 35127739
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtc 716  Q
    |||||||||| | |||||||| |||||||| ||||||||||||||||| |||||||||||    
T  35127798 ttttaagtttcacgtttgttttagatatgtcctttaaatttctaaggtatcagataggtc 35127739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 629 - 751
Target Start/End: Complemental strand, 9907861 - 9907740
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    |||||||||||| |||| | ||| || |||| ||||||| |||||||||| |||| || |||||| ||| ||||||||||||||| || ||||  ||| |    
T  9907861 ttaagtttctaaagtttcagataggttattt-aagtttggagtttgtttcggataggtcctttaagtttataaggtttcagatagatcctttaagtttga 9907763  T
Q  729 agtttattttagataggtccttt 751  Q
    |||||||||  |||| |||||||    
T  9907762 agtttatttcggataagtccttt 9907740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 41718415 - 41718301
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggt-catttagatttcaagtttattttagataggtcctttctatc 756  Q
    ||||||||| | |||||||| ||||| ||||||||||||| |||||||| ||||| || | ||||  |||| ||||| |||  |||||||| ||||| ||    
T  41718415 tttaagtttcacgtttgttttagataggttctttaaatttataaggttttagatatgtccttttaagtttcgagtttgtttcggataggtcttttctgtc 41718316  T
Q  757 aacctccgttaagcc 771  Q
    || ||||||||||||    
T  41718315 aatctccgttaagcc 41718301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 3173240 - 3173333
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| ||| |||||||||||||||||| ||||  |||| ||||| |||  ||||||||||||    
T  3173240 tttaagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcggataggtccttt 3173333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 10097024 - 10097115
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    |||||||||  |||||||||| |||| || |||||| |||||||| ||||||||| ||| || || |||||||||||||| |||||||||||||    
T  10097024 tttaagttttgagtttgtttc-gataggtcctttaagtttctaagatttcagataagtctttaag-tttcaagtttatttcagataggtccttt 10097115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 18942313 - 18942406
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| ||||| |||||||||||||||| |||| ||||| ||||| |||  ||||||| ||||    
T  18942313 tttaagtttcatgtttgtttcagatagatcctttaagtttctgaggtttcagataggtcctttaaatttcgagtttgtttcggataggttcttt 18942406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 669 - 758
Target Start/End: Original strand, 18942384 - 18942473
Alignment:
Q  669 agtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaa 758  Q
    |||||||||| |||| ||||||||| |||||||| ||||||||||||| ||||  |||  ||||| ||| ||||| ||| ||||||||||    
T  18942384 agtttgtttcggataggttctttaagtttctaagttttcagataggtcttttaagttttgagtttgtttcagataagtcatttctatcaa 18942473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 18942656 - 18942563
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| ||| |||||||||||||||||| ||||  |||||||||| |||  ||||| ||||||    
T  18942656 tttaagtttcatgtttgtttcagataaatcctttaagtttataaggtttcagataggtcctttaagtttcaagtttgtttcggatagatccttt 18942563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 670 - 771
Target Start/End: Complemental strand, 37393736 - 37393635
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaag 769  Q
    |||||||| ||||| || |||||| ||| ||||||||| |||||||| || |  |||| ||||| | |  |||||||||||||| |||||||||||||||    
T  37393736 gtttgttttagataggtcctttaagtttttaaggtttcggataggtctttaaagtttcgagtttgtctcggataggtcctttctgtcaacctccgttaag 37393637  T
Q  770 cc 771  Q
    ||    
T  37393636 cc 37393635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 48840337 - 48840244
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| |||||||||||||| ||||||| ||||  |||| ||||| |||  ||||||||||||    
T  48840337 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcaaataggtcctttaagtttcgagtttgtttcggataggtccttt 48840244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 657 - 721
Target Start/End: Complemental strand, 22642202 - 22642138
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    |||||||||| | |||||||||||| | || |||||| |||||||||||||||||| ||||||||    
T  22642202 ttttaagtttcacgtttgtttcagacaggtcctttaagtttctaaggtttcagatatgtcattta 22642138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 658 - 769
Target Start/End: Original strand, 37393395 - 37393506
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| || ||||||  || | ||||||||||||||||  |||  |||| ||||| ||| | ||||||||||||| |||    
T  37393395 tttaagtttcgagtttgtttcggataagtcctttaagatttttaggtttcagataggtcccttaagtttcgagtttgtttcaaataggtcctttctttca 37393494  T
Q  758 acctccgttaag 769  Q
    || |||||||||    
T  37393495 acatccgttaag 37393506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 688 - 771
Target Start/End: Complemental strand, 45909946 - 45909863
Alignment:
Q  688 ctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    |||||| |||||| ||||| ||||||||| || |  |||| ||||| ||| ||||| || ||||||||||||||||||||||||    
T  45909946 ctttaagtttctatggttttagataggtccttaaagtttcgagtttgtttcagataagttctttctatcaacctccgttaagcc 45909863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 669 - 758
Target Start/End: Complemental strand, 45203857 - 45203768
Alignment:
Q  669 agtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaa 758  Q
    |||||||||| ||||  | |||||| ||| |||||||||||||||||| ||||  |||| ||||| ||| ||||| ||| ||||||||||    
T  45203857 agtttgtttcggatagatcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcagatatgtcatttctatcaa 45203768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 715
Target Start/End: Original strand, 48840026 - 48840082
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggt 715  Q
    ||||||||| | |||||||||||||| || ||||||| ||||||||||||||||||||    
T  48840026 tttaagtttcacgtttgtttcagataggtcctttaaa-ttctaaggtttcagataggt 48840082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 623 - 758
Target Start/End: Complemental strand, 29036459 - 29036326
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttag 722  Q
    ||||| ||||||||||||||||| | ||| ||   |||||||||  |||||||||| |||| |  |||||| ||| |||||||||||||||||  ||||     
T  29036459 ggtcctttaagtttctaaggtttcagataggtc--tttaagtttcgagtttgtttcggataggccctttaagtttttaaggtttcagataggttctttaa 29036362  T
Q  723 atttcaagtttattttagataggtcctttctatcaa 758  Q
     |||| ||||| |||  ||| |||| ||||||||||    
T  29036361 gtttcgagtttgtttcggattggtcatttctatcaa 29036326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 688 - 747
Target Start/End: Original strand, 8919537 - 8919596
Alignment:
Q  688 ctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtc 747  Q
    |||||| |||||||||||||||||||||| ||||  |||||||||| |||  ||||||||    
T  8919537 ctttaagtttctaaggtttcagataggtcctttaagtttcaagtttgtttcggataggtc 8919596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 721
Target Start/End: Original strand, 9907492 - 9907555
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | |||||||||||||| || |||||| ||| |||||||| ||||||||| ||||    
T  9907492 tttaagtttaacgtttgtttcagataggtcctttaagtttttaaggttttagataggtccttta 9907555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 721
Target Start/End: Original strand, 10096964 - 10097027
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | |||||||||| |||  | ||||||||||||||||||||||||| ||| ||||    
T  10096964 tttaagttttatgtttgtttcaaatagatcctttaaatttctaaggtttcagataagtccttta 10097027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 716
Target Start/End: Original strand, 10470595 - 10470642
Alignment:
Q  669 agtttgtttcagatatgttctttaaatttctaaggtttcagataggtc 716  Q
    |||||||||| |||| || |||||| ||||||||||||||||||||||    
T  10470595 agtttgtttcggataggtcctttaagtttctaaggtttcagataggtc 10470642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 657 - 751
Target Start/End: Complemental strand, 9907894 - 9907800
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    |||||||||| | |||| |||||||||  | |||||| ||||||| ||||||||||||| |||||  |||  ||||| |||  ||||||||||||    
T  9907894 ttttaagtttcatgtttatttcagatagatcctttaagtttctaaagtttcagataggttatttaagtttggagtttgtttcggataggtccttt 9907800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 658 - 716
Target Start/End: Complemental strand, 29036485 - 29036427
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtc 716  Q
    ||||||||| |  |||||||| |||| || |||||| ||||||||||||||||||||||    
T  29036485 tttaagtttcacatttgtttctgataggtcctttaagtttctaaggtttcagataggtc 29036427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 658 - 712
Target Start/End: Original strand, 44449075 - 44449129
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagata 712  Q
    |||||||||  |||||||||| |||| || |||||| ||||||||||||||||||    
T  44449075 tttaagtttcgagtttgtttcggataagtcctttaagtttctaaggtttcagata 44449129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 729 - 771
Target Start/End: Original strand, 47332454 - 47332496
Alignment:
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| |||||| ||||||||||||||||||||||||||    
T  47332454 agtttgtttcagatagatcctttctatcaacctccgttaagcc 47332496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 6723555 - 6723462
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | | |||| |||||||||||| |||||| || ||||  |||| ||||| |||  ||||||||||||    
T  6723555 tttaagttttatgtttgtttcagatagatccgttaagtttctaaggttttagatagatcctttaagtttcgagtttgtttcggataggtccttt 6723462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 751
Target Start/End: Original strand, 10470537 - 10470617
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||||||||  |  ||||| |||||||||||||||||||||| |||| | ||| ||||| |||  ||||||||||||    
T  10470537 gtttgtttcagatagatcatttaagtttctaaggtttcagataggtccttta-aattcgagtttgtttcggataggtccttt 10470617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 39304988 - 39305081
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  |||||||| ||| |||||||||| |||| || ||||  |||| ||||| |||  ||||| ||||||    
T  39304988 tttaagtttcacgtttgtttcagatagattctttaagtttttaaggtttcatatagatcctttaagtttcgagtttgtttcggatagatccttt 39305081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 747
Target Start/End: Original strand, 42758959 - 42759048
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtc 747  Q
    ||||||||| | || |||||||||||  |  ||||| ||| |||||||||||||||||| ||||  |||| ||||| ||| |||||||||    
T  42758959 tttaagtttcatgtatgtttcagatagatcttttaagtttataaggtttcagataggtcctttaagtttcgagtttgtttcagataggtc 42759048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 751
Target Start/End: Original strand, 44449027 - 44449108
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||||||||  | |||||| ||| |||||||||||||||||| ||||  |||| ||||| |||  |||| |||||||    
T  44449027 gtttgtttcagatagatcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcggataagtccttt 44449108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 1e-31; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 43671511 - 43671370
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||||||||||||||  ||| || |||||| ||||||||||||||||||||||||||| |||||     
T  43671511 ttaagtttctaaggttttagataggt-cctttaagtttgaagtttgtttcgaataggtcctttaagtttctaaggtttcagataggtcatttaaatttcg 43671413  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| ||||||||| |||||||||||||| ||||||||    
T  43671412 agtttgtttcagataggtcatttctatcaacctctgttaagcc 43671370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 629 - 770
Target Start/End: Complemental strand, 35125638 - 35125498
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||| ||| ||||||  |||||||||| |||| || ||||||||||||||||||||||||||||| ||||  ||||     
T  35125638 ttaagtttctaaggtttcagataagtgcttt-aagtttcgagtttgtttcggataggtcctttaaatttctaaggtttcagataggtcttttaagtttcg 35125540  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagc 770  Q
    ||||| ||| |||||||||||||||||||||||| |||||||    
T  35125539 agtttgtttcagataggtcctttctatcaacctctgttaagc 35125498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 623 - 769
Target Start/End: Complemental strand, 28182459 - 28182315
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttag 722  Q
    ||||| ||||||||||||||||| | ||| ||  ||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||| || ||||     
T  28182459 ggtcctttaagtttctaaggttttagataggtc-ttttaagtttggagtttgtttcagatatgtcctttaagtttctaaggtttcagatagttc-tttaa 28182362  T
Q  723 atttcaagtttattttagataggtcctttctatcaacctccgttaag 769  Q
     |||| ||||| ||| |||||| |||||||||||||| |||||||||    
T  28182361 gtttcgagtttgtttcagatagatcctttctatcaacatccgttaag 28182315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 4603804 - 4603663
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| ||||| || |||| ||||||  ||||||| ||||||| || |||||| ||||||| |||||||||||||| ||||  ||||     
T  4603804 ttaagtttctaaggtttcaaataggtcattt-aagtttcgagtttgtatcagataagtcctttaagtttctaatgtttcagataggtcctttaagtttct 4603706  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    || || ||| ||||||||| |||||||||||||||||||||||    
T  4603705 agcttgtttcagataggtcttttctatcaacctccgttaagcc 4603663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 629 - 771
Target Start/End: Original strand, 34334579 - 34334720
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    |||||||| |||||||| | ||| || |||| ||||||  |||||||||  ||||||| |||||| |||||||||||||||||||||||||||  ||||     
T  34334579 ttaagtttttaaggtttcagataggtcattt-aagtttcgagtttgtttgggatatgtcctttaagtttctaaggtttcagataggtcatttaagtttct 34334677  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| |||||||  ||||||||||||||||||||||||    
T  34334678 agtttgtttcagataggctctttctatcaacctccgttaagcc 34334720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 670 - 770
Target Start/End: Original strand, 29683606 - 29683706
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaag 769  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| ||||  |||| ||||| |||| |||| ||||||||| |||||||||||||||    
T  29683606 gtttgtttcagataggttctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgttttggataagtcctttctgtcaacctccgttaag 29683705  T
Q  770 c 770  Q
    |    
T  29683706 c 29683706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 45638388 - 45638247
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| ||||| ||  ||| |||| || |||||||||| |||| || |||||| ||||||||||||||||||| || ||||  ||||     
T  45638388 ttaagtttctaaggtttcaaataggtccttt-aagtatggagtttgtttcggataggtcctttaagtttctaaggtttcagatagatcctttaagtttcg 45638290  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| ||||| |||||||||||||| ||||||||||||    
T  45638289 agtttgtttcagataagtcctttctatcaaactccgttaagcc 45638247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 30851079 - 30851192
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| |  |||||||||||||  | |||||| ||| ||| |||||||||||||| ||||  |||||||||| ||| |||||||||||||||||||    
T  30851079 tttaagtttcatatttgtttcagatagatcctttaagtttttaacgtttcagataggtcctttaagtttcaagtttgtttcagataggtcctttctatca 30851178  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  30851179 acctccgttaagcc 30851192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 629 - 768
Target Start/End: Complemental strand, 33616067 - 33615929
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| || | |||||||||  |||||||||| |||| || ||| ||||||||||||||||||||||||  ||||  ||||     
T  33616067 ttaagtttctaaggtttcagataggt-actttaagttttgagtttgtttcggataggtccttaaaatttctaaggtttcagataggttctttaagtttcg 33615969  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaa 768  Q
    | ||| ||||||||||||| ||||||||||||||| ||||    
T  33615968 aatttgttttagataggtcatttctatcaacctccattaa 33615929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 674 - 771
Target Start/End: Original strand, 7438323 - 7438420
Alignment:
Q  674 gtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    |||||||||| || |||||| |||||||||||||||||||||| ||||  |||| ||||| ||| ||||||||||||||||||||| || ||||||||    
T  7438323 gtttcagataggtcctttaagtttctaaggtttcagataggtcttttaagtttcgagtttgtttcagataggtcctttctatcaacatctgttaagcc 7438420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 33953504 - 33953391
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| || |||||| |||||||||||||||||| | | ||||   ||| ||||| |||||| ||||||||||||||||    
T  33953504 tttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataagccctttaagcttcgagtttgttttaggtaggtcctttctatca 33953405  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  33953404 acctccgttaagcc 33953391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 659 - 771
Target Start/End: Original strand, 28238450 - 28238562
Alignment:
Q  659 ttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaa 758  Q
    |||||||| | |||||||||||||| || |||||| |||||||||||| ||||| ||| ||||  |||| ||||| |||  |||||||||||||| ||||    
T  28238450 ttaagtttcacgtttgtttcagataggtcctttaagtttctaaggttttagataagtcctttaagtttcgagtttgtttcggataggtcctttctgtcaa 28238549  T
Q  759 cctccgttaagcc 771  Q
    |||||||||||||    
T  28238550 cctccgttaagcc 28238562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 43671260 - 43671360
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| ||  ||||| |||||||||||||||||||||| ||||  |||||||||| ||| |||||||||||||||||||    
T  43671260 tttaagtttcgagtttgtttcggataggtcttttaagtttctaaggtttcagataggtcttttaagtttcaagtttgtttcagataggtcctttctatca 43671359  T
Q  758 a 758  Q
    |    
T  43671360 a 43671360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 629 - 768
Target Start/End: Original strand, 5482921 - 5483059
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||| ||||||||||  |||||||||| ||||  | |||||| ||| |||||||||||||| ||| ||||  ||||     
T  5482921 ttaagtttctaaggtttcagataggtg-ttttaagtttcgagtttgtttcggatagatcctttaagtttataaggtttcagataagtcctttaagtttcg 5483019  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaa 768  Q
    ||||| ||| ||||| ||| ||||||||||||||||||||    
T  5483020 agtttgtttcagataagtcatttctatcaacctccgttaa 5483059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 629 - 771
Target Start/End: Original strand, 30513000 - 30513141
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgat--tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagattt 726  Q
    ||||||||||||||||||| |||   |||  |||||||||| |||||||||| |||| || |||||  |||||||||||||||||||||| ||||   ||    
T  30513000 ttaagtttctaaggtttaagata---gatcctttaagtttggagtttgtttcggataggtcctttatgtttctaaggtttcagataggtcctttaaggtt 30513096  T
Q  727 caagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    | ||||| ||| ||||| ||| |||||||||| ||||||||||||    
T  30513097 cgagtttgtttcagatatgtcatttctatcaaactccgttaagcc 30513141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 629 - 758
Target Start/End: Original strand, 28182174 - 28182303
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaa-tttctaaggtttcagataggtcatttagatttc 727  Q
    |||| |||||||||||| | ||||||  ||| |||||||||||||||||| ||||||| |||| || |||||||||||| ||||||||| ||||  ||||    
T  28182174 ttaaatttctaaggttttagatatgtccttt-aagtttgaagtttgtttcggatatgtccttttaagtttctaaggttttagataggtcctttaagtttc 28182272  T
Q  728 aagtttattttagataggtcctttctatcaa 758  Q
     ||||| |||||||| |||| ||||||||||    
T  28182273 gagtttgttttagattggtcatttctatcaa 28182303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 688 - 769
Target Start/End: Complemental strand, 28238772 - 28238691
Alignment:
Q  688 ctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaag 769  Q
    |||||| |||||||||||||||||||||| ||||  |||| ||||| ||| ||||||||| |||||||||||||||||||||    
T  28238772 ctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtcatttctatcaacctccgttaag 28238691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 674 - 771
Target Start/End: Original strand, 44436481 - 44436577
Alignment:
Q  674 gtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    |||||||||| || |||||| ||| |||||||||||||| ||| || || |||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  44436481 gtttcagataagtcctttaagtttttaaggtttcagatatgtctttaag-tttctagtttgtttcagataggtcctttctatcaacctccgttaagcc 44436577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 622 - 758
Target Start/End: Complemental strand, 5248289 - 5248154
Alignment:
Q  622 gggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    |||||| |||| |||| ||||||| ||||| ||  ||||||||||  | |||||||| |||| || |||||| |||||||||||||||||||||| ||||    
T  5248289 gggtcctttaaatttccaaggtttcaaataggtc-ttttaagtttcgaatttgtttcggataggtcctttaagtttctaaggtttcagataggtccttta 5248191  T
Q  722 gatttcaagtttattttagataggtcctttctatcaa 758  Q
      |||| ||||| ||| ||||||||| ||||||||||    
T  5248190 agtttcgagtttgtttcagataggtcttttctatcaa 5248154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 658 - 758
Target Start/End: Complemental strand, 7438530 - 7438430
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||| ||||| ||  ||||| |||||||||||||||||||||| |||| ||||| ||||| ||| |||||| ||||||||||||    
T  7438530 tttaagtttcacgtttgttttagataggtcttttaagtttctaaggtttcagataggtcctttaaatttcgagtttgtttcagatagatcctttctatca 7438431  T
Q  758 a 758  Q
    |    
T  7438430 a 7438430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 674 - 758
Target Start/End: Original strand, 35125404 - 35125488
Alignment:
Q  674 gtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaa 758  Q
    |||||||||| || |||||| ||||||||||||||||| |||||||||  |||| ||||||||| ||||||||| ||||||||||    
T  35125404 gtttcagataggtcctttaagtttctaaggtttcagatgggtcatttaagtttcgagtttatttcagataggtcatttctatcaa 35125488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 658 - 769
Target Start/End: Original strand, 1038949 - 1039060
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||| |||||||||| |||| ||  ||||| ||| |||||||||||||||||| ||||  |||| ||||| |||  |||||||| |||||||||    
T  1038949 tttaagtttggagtttgtttcggataggtcatttaagtttataaggtttcagataggtcctttaagtttccagtttgtttcggataggtcatttctatca 1039048  T
Q  758 acctccgttaag 769  Q
    ||||| ||||||    
T  1039049 acctctgttaag 1039060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 670 - 769
Target Start/End: Original strand, 43865382 - 43865481
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaag 769  Q
    ||||||||||||||  |  ||||| ||| |||||||||||||||||| ||||  |||| | ||| ||| |||||||||||||||||||||||||||||||    
T  43865382 gtttgtttcagatagatcttttaagtttttaaggtttcagataggtcctttaagtttcgattttgtttcagataggtcctttctatcaacctccgttaag 43865481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 658 - 768
Target Start/End: Original strand, 33953171 - 33953281
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| || ||||||||||||| |  |||||| ||||||| |||||||||||||| ||||  |||| ||||| |||  |||||||| ||||| |||    
T  33953171 tttaagtttcaattttgtttcagataggccctttaagtttctaaagtttcagataggtcttttaagtttcgagtttgtttcggataggtcatttctgtca 33953270  T
Q  758 acctccgttaa 768  Q
    |||||||||||    
T  33953271 acctccgttaa 33953281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 30823728 - 30823615
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||| |||||  |  ||||| |||||||||||||||||||||  ||||  |||| |||||||||  |||||||| ||||| |||    
T  30823728 tttaagttttacgtttgttttagatagatcatttaattttctaaggtttcagataggttctttaagtttcgagtttatttcggataggtcatttctgtca 30823629  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  30823628 acctccgttaagcc 30823615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 658 - 758
Target Start/End: Complemental strand, 1039172 - 1039072
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| ||||||| |||||| ||||||||||| |||||| ||| ||||  |||||||||| ||| ||||| ||| |||||||||    
T  1039172 tttaagtttcgagtttgtttcggatatgtcctttaagtttctaaggttacagatatgtcctttatgtttcaagtttgtttcagatatgtcatttctatca 1039073  T
Q  758 a 758  Q
    |    
T  1039072 a 1039072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 28582459 - 28582559
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| || |||||| |||||| ||||||||||||||| ||||  |||| ||||| ||| ||||||||| |||||||||    
T  28582459 tttaagtttcgagtttgtttcggataggtcctttaagtttctatggtttcagataggtcctttaagtttcgagtttgtttcagataggtcatttctatca 28582558  T
Q  758 a 758  Q
    |    
T  28582559 a 28582559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 674 - 760
Target Start/End: Original strand, 5248066 - 5248152
Alignment:
Q  674 gtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacc 760  Q
    ||||||||||  | |||||| |||||||||||||||||||||| ||||  |||| ||||| ||| ||||||||| ||||||||||||    
T  5248066 gtttcagataaatcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtcatttctatcaacc 5248152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 669 - 755
Target Start/End: Complemental strand, 11974180 - 11974094
Alignment:
Q  669 agtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctat 755  Q
    |||||||||| |||| || |||||| ||||||||||||||||||| || ||||  |||| ||||| ||| |||||||||||||||||    
T  11974180 agtttgtttcggataggtcctttaagtttctaaggtttcagatagatcctttaagtttcgagtttgtttcagataggtcctttctat 11974094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 669 - 771
Target Start/End: Original strand, 30823409 - 30823511
Alignment:
Q  669 agtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaa 768  Q
    |||||||||| |||||||  ||||| ||| |||||||||||||   || ||||  |||| ||||| ||| |||||||||||||||||||| |||||||||    
T  30823409 agtttgtttcggatatgtcttttaagtttttaaggtttcagattaatcctttaagtttcgagtttgtttcagataggtcctttctatcaatctccgttaa 30823508  T
Q  769 gcc 771  Q
    |||    
T  30823509 gcc 30823511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 15285811 - 15285924
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||||||||| ||  | ||| ||||||||| |||||||||||| ||||  |||| ||||| |||  |||| ||| ||||| |||    
T  15285811 tttaagtttcaggtttgtttcagataggtcatgtaagtttctaaggcttcagataggtcctttaagtttcgagtttgtttcggataagtcatttctttca 15285910  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  15285911 acctccgttaagcc 15285924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 33615756 - 33615849
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||| ||||||||| ||||||||| |||||||||||||| |||| || |||| ||||| ||||| |||  ||||||||||||    
T  33615756 tttaagtttcacgtttatttcagataagttctttaagtttctaaggtttcatatagatcctttaaatttcgagtttgtttcggataggtccttt 33615849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 669 - 758
Target Start/End: Complemental strand, 44436676 - 44436587
Alignment:
Q  669 agtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaa 758  Q
    |||||||||| ||||||| |||||| ||||||| |||||||||||||| ||||  |||| ||||| ||| | ||||||| ||||||||||    
T  44436676 agtttgtttcggatatgtcctttaagtttctaaagtttcagataggtcctttaagtttcgagtttgtttcaaataggtcttttctatcaa 44436587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 45638077 - 45638170
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||||||| || |||||| ||||||| |||||||||||||| ||||  |||| ||||| |||  ||||||||||||    
T  45638077 tttaagtttcatgtttgtttcagataggtcctttaagtttctaacgtttcagataggtcctttaagtttcgagtttgtttcggataggtccttt 45638170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 703 - 771
Target Start/End: Original strand, 9143958 - 9144026
Alignment:
Q  703 gtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| |||||||  ||||  |||| |||||||||||||||||| ||||||||||||||||||||||||    
T  9143958 gtttcggataggtgttttaagtttcgagtttattttagataggttctttctatcaacctccgttaagcc 9144026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 658 - 721
Target Start/End: Complemental strand, 30851360 - 30851296
Alignment:
Q  658 tttaagtttgaagtttgtttcaga-tatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | |||||||||||| ||||| ||||||||||||||||||||||||||||| ||||    
T  30851360 tttaagtttaacgtttgtttcagaatatgtcctttaaatttctaaggtttcagataggtccttta 30851296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 45638137 - 45638237
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| || |||||| ||||||| |||||||||||||| ||||   ||| ||||| ||| ||||||||| |||||||||    
T  45638137 tttaagtttcgagtttgtttcggataggtcctttaagtttctaaagtttcagataggtcctttaagattcgagtttgtttcagataggtcatttctatca 45638236  T
Q  758 a 758  Q
    |    
T  45638237 a 45638237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 658 - 721
Target Start/End: Original strand, 5247992 - 5248055
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||||||||||||||| ||||  | |||||| |||||||||||||||||||||| ||||    
T  5247992 tttaagtttgaagtttgtttcggatagatcctttaagtttctaaggtttcagataggtccttta 5248055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 657 - 771
Target Start/End: Original strand, 36387278 - 36387393
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttatttt-agataggtcctttctat 755  Q
    |||||||||| | |||||| |||||||  | |||||| |||  ||| ||||||||||||  ||||  |||| ||||| |||| ||||||||| |||||||    
T  36387278 ttttaagtttcatgtttgtgtcagatagatcctttaagttttcaagatttcagataggttctttaagtttcgagttttttttcagataggtcttttctat 36387377  T
Q  756 caacctccgttaagcc 771  Q
    ||||||||||||||||    
T  36387378 caacctccgttaagcc 36387393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 4603836 - 4603743
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| |||||||||||||| ||||||||||||  |||| ||||| | | ||||| |||||||    
T  4603836 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcaaataggtcatttaagtttcgagtttgtatcagataagtccttt 4603743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 5483232 - 5483139
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||||||| || |||||| |||| ||||||||||||| ||| ||||  | || ||||| ||||| |||||||||||    
T  5483232 tttaagtttcacgtttgtttcagataggtcctttaagtttccaaggtttcagataagtcctttaagtgtcgagtttgttttaaataggtccttt 5483139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 11973937 - 11974030
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| |||||||||||||||||| ||| |||| |||| |||||| |||  ||||| ||||||    
T  11973937 tttaagtttcatgtttgtttcagataaatcctttaagtttctaaggtttcagataagtcttttaaatttgaagtttgtttcggatagatccttt 11974030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 11974251 - 11974158
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||||||||||  ||||| ||| ||||||||||||||  || |||| ||||| ||||| |||  ||||||||||||    
T  11974251 tttaagtttcacgtttgtttcagatatgtcttttaagtttataaggtttcagataaatcctttaaatttcgagtttgtttcggataggtccttt 11974158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 28182485 - 28182392
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||||||| || |||||| |||||||||||| ||||||||| ||||  |||  ||||| ||| ||||| |||||||    
T  28182485 tttaagtttcacgtttgtttcagataggtcctttaagtttctaaggttttagataggtcttttaagtttggagtttgtttcagatatgtccttt 28182392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 34334547 - 34334640
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| ||| |||||||||||||||||||||||  |||| ||||| |||  |||| |||||||    
T  34334547 tttaagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcatttaagtttcgagtttgtttgggatatgtccttt 34334640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 703 - 771
Target Start/End: Original strand, 11974013 - 11974081
Alignment:
Q  703 gtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||||| || ||||  |||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  11974013 gtttcggatagatcctttaagtttcgagtttgtttcagataggtcctttctatcaacctccgttaagcc 11974081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 658 - 721
Target Start/End: Complemental strand, 30513250 - 30513187
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | |||||||||||||  || |||||| |||||||||||||||||||||| ||||    
T  30513250 tttaagtttcacgtttgtttcagatgagtcctttaagtttctaaggtttcagataggtccttta 30513187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 623 - 758
Target Start/End: Complemental strand, 34334864 - 34334730
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttag 722  Q
    ||||| ||||||||||||||||| | ||| ||  ||| || || || |||||||||  ||| ||  ||||| |||||||||||| ||||| ||| ||||     
T  34334864 ggtcctttaagtttctaaggtttcagataggtcctttaaatttcga-gtttgtttcgtataagtcatttaagtttctaaggttttagatatgtcctttaa 34334766  T
Q  723 atttcaagtttattttagataggtcctttctatcaa 758  Q
     |||||| ||| ||| ||||||||||||||||||||    
T  34334765 gtttcaaatttgtttcagataggtcctttctatcaa 34334730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 705 - 771
Target Start/End: Complemental strand, 28582635 - 28582569
Alignment:
Q  705 ttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    |||||||||||| ||||  |||| ||||| |||   |||||||||||||||||||||||||||||||    
T  28582635 ttcagataggtcctttaagtttcgagtttgtttcgtataggtcctttctatcaacctccgttaagcc 28582569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 716
Target Start/End: Complemental strand, 40343787 - 40343729
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtc 716  Q
    |||||||||  ||||||||| ||||| || |||||| ||||||||||||||||||||||    
T  40343787 tttaagttttgagtttgttttagataggtgctttaagtttctaaggtttcagataggtc 40343729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 751
Target Start/End: Original strand, 4603509 - 4603586
Alignment:
Q  674 gtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    |||| ||||| || |||||||||| |||||||||||||||||| ||||  |||| ||||| |||  ||||||||||||    
T  4603509 gttttagataggtcctttaaatttttaaggtttcagataggtcctttaagtttcgagtttctttcggataggtccttt 4603586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 715
Target Start/End: Original strand, 5482889 - 5482946
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggt 715  Q
    ||||||||| | ||||||||||||||  | |||||| |||||||||||||||||||||    
T  5482889 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggt 5482946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 7881634 - 7881747
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||||| ||| |   ||||||||||||||||||||||||| || ||||  |||| ||||| ||||  ||| ||| ||||| |||    
T  7881634 tttaagtttcacgtttgtttcaaataggccttttaaatttctaaggtttcagatagatcctttaagtttcgagtttgttttgaatatgtcatttctgtca 7881733  T
Q  758 acctccgttaagcc 771  Q
    |||||  |||||||    
T  7881734 acctctattaagcc 7881747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 15286165 - 15286052
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||||| |||  | |||||| ||| |||||||||||||||||| ||||  |||| ||||| |||| || | || |||||| | |    
T  15286165 tttaagtttcatgtttgtttcatatagatcctttaagtttataaggtttcagataggtcctttaagtttcgagtttgttttggaaatgttctttctgtta 15286066  T
Q  758 acctccgttaagcc 771  Q
    || |||||||||||    
T  15286065 acatccgttaagcc 15286052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 769
Target Start/End: Complemental strand, 15787050 - 15786913
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||||||  ||| ||||||  |||||||||  |||| |||  |||| ||||||| |||| ||||||||| ||||  ||||     
T  15787050 ttaagtttctaaggtttcagatatgtccttt-aagtttcgagtttgtttaggataggtt--ttaagtttctaaagttttagataggtcctttaagtttcg 15786954  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaag 769  Q
    ||||| ||||| |||  || |||||||||||||| ||||||    
T  15786953 agtttgttttatataaatcatttctatcaacctctgttaag 15786913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 28582399 - 28582492
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||||||  || |||||  |||||||||||||| ||||||| ||||  |||| ||||| |||  ||||||||||||    
T  28582399 tttaagtttcacgtttgtttcagatgggtcctttacgtttctaaggtttcatataggtcctttaagtttcgagtttgtttcggataggtccttt 28582492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 703 - 768
Target Start/End: Complemental strand, 29683908 - 29683843
Alignment:
Q  703 gtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaa 768  Q
    |||||||||||||| ||||  |||  ||||| ||| ||||||||||||||||||||||| ||||||    
T  29683908 gtttcagataggtcctttaagttttgagtttgtttcagataggtcctttctatcaaccttcgttaa 29683843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 670 - 758
Target Start/End: Complemental strand, 36387492 - 36387403
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttct-aaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaa 758  Q
    |||||||||||||| || |||||| ||||| ||| ||||||||| ||| ||||  |||| ||||| ||| ||||||||| ||||||||||    
T  36387492 gtttgtttcagataggtcctttaagtttctaaagatttcagatatgtcttttaagtttcgagtttgtttcagataggtcatttctatcaa 36387403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 658 - 726
Target Start/End: Original strand, 4603464 - 4603532
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagattt 726  Q
    ||||||||| | ||||||||| |||| || |||||| |||||||||||| ||||||||| |||| ||||    
T  4603464 tttaagtttcacgtttgtttcggataggtcctttaagtttctaaggttttagataggtcctttaaattt 4603532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 4603553 - 4603653
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  ||||| |||| |||| || |||||| ||| |||||||||||||||||  ||||  |||| ||||| ||| || |||||| |||||||||    
T  4603553 tttaagtttcgagtttctttcggataggtcctttaagtttttaaggtttcagataggttctttaattttcgagtttgtttcagttaggtcatttctatca 4603652  T
Q  758 a 758  Q
    |    
T  4603653 a 4603653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 671 - 751
Target Start/End: Complemental strand, 33953551 - 33953471
Alignment:
Q  671 tttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    |||||||||||||  | |||||| ||||||| |||||||||||||| ||||  |||| ||||| |||  ||||||||||||    
T  33953551 tttgtttcagatagatcctttaagtttctaaagtttcagataggtcctttaagtttcgagtttgtttcggataggtccttt 33953471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 658 - 758
Target Start/End: Complemental strand, 42553726 - 42553627
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||  |||| || |||||| ||||||| ||||||||||| || ||||  |||| ||||| ||| ||||||||| |||||||||    
T  42553726 tttaagtttcgagtttgtttg-gataggtcctttaagtttctaaagtttcagatagatcctttaagtttcgagtttgtttcagataggtcatttctatca 42553628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 749
Target Start/End: Complemental strand, 1844591 - 1844500
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcct 749  Q
    ||||||||| | |||| |||||||||  | |||||| ||||||||||||||||| |||| ||||  ||| |||||| |||  ||||||||||    
T  1844591 tttaagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagatcggtcctttaagtttgaagtttgtttcggataggtcct 1844500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 721
Target Start/End: Original strand, 35125359 - 35125422
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | |||||||||||||  || |||||| ||||||| |||||||||||||| ||||    
T  35125359 tttaagtttaatgtttgtttcagatcggtcctttaagtttctaaagtttcagataggtccttta 35125422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 689 - 768
Target Start/End: Complemental strand, 40343639 - 40343560
Alignment:
Q  689 tttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaa 768  Q
    ||||| ||||||| ||||||||||| || ||||  |||| ||||| ||| | ||| ||| ||||||||||||||||||||    
T  40343639 tttaagtttctaaagtttcagatagttcctttaagtttcgagtttgtttcaaataagtcatttctatcaacctccgttaa 40343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 721
Target Start/End: Complemental strand, 45638420 - 45638357
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | ||||||||||||||  | |||||| |||||||||||||| ||||||| ||||    
T  45638420 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcaaataggtccttta 45638357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 1039232 - 1039139
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  || ||||  |||||||||||| ||||||||| ||||  |||| ||||| |||  |||| |||||||    
T  1039232 tttaagtttcacgtttgtttcagataaattttttaggtttctaaggttttagataggtcctttaagtttcgagtttgtttcggatatgtccttt 1039139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 5247932 - 5248025
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  |  ||||| |||| ||||||||||||||||| ||||  ||| |||||| |||  ||||| ||||||    
T  5247932 tttaagttttatgtttgtttcagataaatcatttaagtttcgaaggtttcagataggtcctttaagtttgaagtttgtttcggatagatccttt 5248025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 28182143 - 28182235
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||| ||| || ||||||||||||||||||| ||||| ||| ||||  ||| |||||| |||  |||| |||||||    
T  28182143 tttaagttttacgtttgtttcaaataggt-ctttaaatttctaaggttttagatatgtcctttaagtttgaagtttgtttcggatatgtccttt 28182235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 751
Target Start/End: Original strand, 30512980 - 30513061
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||||||||  |||||||| |||||||||||| |||||| || ||||  |||  ||||| |||  ||||||||||||    
T  30512980 gtttgtttcagatagattctttaagtttctaaggtttaagatagatcctttaagtttggagtttgtttcggataggtccttt 30513061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 715
Target Start/End: Complemental strand, 33616099 - 33616042
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggt 715  Q
    ||||||||| | |||||||| |||||  | |||||| |||||||||||||||||||||    
T  33616099 tttaagtttcatgtttgttttagatagatcctttaagtttctaaggtttcagataggt 33616042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 713
Target Start/End: Complemental strand, 40343755 - 40343673
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagatag 713  Q
    ||||||||||||||||| | ||| ||   |||||||||  |||||||||| |||| || |||||| |||||||||||| ||||||    
T  40343755 ttaagtttctaaggtttcagataggtc--tttaagtttcgagtttgtttcggataggtgctttaagtttctaaggttttagatag 40343673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 40343847 - 40343754
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||| | ||  | |||| |||||||||||||| ||||||||| ||||  |||  ||||| |||||||||||| ||||    
T  40343847 tttaagtttcatgtttgtttctggtagatccttttaatttctaaggttttagataggtcctttaagttttgagtttgttttagataggtgcttt 40343754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 42553786 - 42553694
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| |  ||||||||||||| ||  ||||| ||| |||||||||||||||||| ||||  |||| |||||  ||| ||||||||||||    
T  42553786 tttaagtttcacatttgtttcagataggtcatttaagtttataaggtttcagataggtcctttaagtttcgagttt-gtttggataggtccttt 42553694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 4e-31; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 24012597 - 24012484
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | ||||||||||||||  | |||||| |||||||||||||||||||||| |||| ||||| ||||| ||| |||||||||||||||||||    
T  24012597 tttaagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaaatttcgagtttgtttcagataggtcctttctatca 24012498  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  24012497 acctccgttaagcc 24012484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 674 - 771
Target Start/End: Complemental strand, 4799601 - 4799504
Alignment:
Q  674 gtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||||||||||| |||||| |||||||||||||||||||||| |||| ||||| ||||| ||| ||||||||||||||| |||||||||||||||||    
T  4799601 gtttcagatatgtcctttaagtttctaaggtttcagataggtcctttaaatttcgagtttgtttcagataggtcctttctgtcaacctccgttaagcc 4799504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 629 - 762
Target Start/End: Original strand, 29134959 - 29135091
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    |||||||| |||||||| ||||||||  ||| ||||||  |||||||||| ||||  | |||||| ||||||| ||||||||||||||||||| ||||||    
T  29134959 ttaagtttttaaggtttcaaatatgtccttt-aagtttcgagtttgtttcggatagatcctttaagtttctaaagtttcagataggtcatttaaatttca 29135057  T
Q  729 agtttattttagataggtcctttctatcaacctc 762  Q
    ||||| ||| ||||||||||||||||||||||||    
T  29135058 agtttttttcagataggtcctttctatcaacctc 29135091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 7858641 - 7858754
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||||||||||||||| ||||  | |||||| |||||||||||||||||  ||||||||  |||||||||| ||| ||||||||| ||||||||     
T  7858641 tttaagtttgaagtttgtttcggatagttcctttaagtttctaaggtttcagatgagtcatttaagtttcaagtttgtttcagataggtcatttctatcg 7858740  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  7858741 acctccgttaagcc 7858754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 629 - 758
Target Start/End: Original strand, 5985825 - 5985953
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||||||  ||| |||||| ||||||||||| |||| || |||||| |||||||||||||||||||||| ||||  ||||     
T  5985825 ttaagtttctaaggtttcagatatgtccttt-aagttttaagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcg 5985923  T
Q  729 agtttattttagataggtcctttctatcaa 758  Q
    ||||  ||| |||||||||  |||||||||    
T  5985924 agttggtttcagataggtcagttctatcaa 5985953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 7675581 - 7675694
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | ||||||||| |||||| ||||||| ||| |||||||||||||||||| ||||  |||| ||||| ||||| ||| ||| |||||||||    
T  7675581 tttaagtttcacgtttgtttccgatatgatctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgttttaaatatgtcatttctatca 7675680  T
Q  758 acctccgttaagcc 771  Q
    || | |||||||||    
T  7675681 actttcgttaagcc 7675694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 629 - 758
Target Start/End: Original strand, 4799366 - 4799494
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    |||||||||||| |||| | ||||||  ||| ||||||  |||||||||| |||||||  ||||| |||||||||||||||||| ||| ||||| ||||     
T  4799366 ttaagtttctaaagtttcagatatgtccttt-aagttttgagtttgtttcggatatgtcatttaagtttctaaggtttcagataagtcctttaggtttcg 4799464  T
Q  729 agtttattttagataggtcctttctatcaa 758  Q
    ||||| ||| | |||||| |||||||||||    
T  4799465 agtttgtttcaaataggtgctttctatcaa 4799494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 658 - 755
Target Start/End: Complemental strand, 33041026 - 33040927
Alignment:
Q  658 tttaagtttgaagtttgtttcagatat--gttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctat 755  Q
    ||||||||||||||||||||| |||||  || |||||| ||||||||||||||||||| || ||||  |||| ||||| ||| |||||| || |||||||    
T  33041026 tttaagtttgaagtttgtttcggatatatgtcctttaagtttctaaggtttcagatagttcttttaagtttcgagtttgtttcagatagatcatttctat 33040927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 692 - 762
Target Start/End: Complemental strand, 4997982 - 4997912
Alignment:
Q  692 aaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctc 762  Q
    ||||||||||||||||||||| ||| ||||  |||| ||||| ||| ||||||||| ||||||||||||||    
T  4997982 aaatttctaaggtttcagataagtcctttaagtttcgagtttgtttcagataggtcatttctatcaacctc 4997912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 5985793 - 5985886
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| |||||||||||||||||| ||| ||||  ||| |||||| |||  ||||||||||||    
T  5985793 tttaagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagatatgtcctttaagttttaagtttgtttcggataggtccttt 5985886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 658 - 721
Target Start/End: Original strand, 14942268 - 14942331
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | |||||||| |||||  | ||||||||||||||||||||||||||||| ||||    
T  14942268 tttaagtttcacgtttgttttagatagatcctttaaatttctaaggtttcagataggtccttta 14942331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 658 - 721
Target Start/End: Complemental strand, 33041086 - 33041023
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | |||||||||||||| || |||||| ||| |||||||||||||||||| ||||    
T  33041086 tttaagtttcacgtttgtttcagataggtcctttaagtttgtaaggtttcagataggtccttta 33041023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 744
Target Start/End: Complemental strand, 9049846 - 9049760
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagatag 744  Q
    ||||||||| | ||||||||||||||  | |||||| ||||||||||||| |||||||| |||| ||||| | ||| ||| ||||||    
T  9049846 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcggataggtcctttaaatttcgaatttgtttcagatag 9049760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 669 - 721
Target Start/End: Original strand, 14942339 - 14942391
Alignment:
Q  669 agtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||||  |||||| |||||| ||||||||||||||||||| |||||||    
T  14942339 agtttgtttcgtatatgtcctttaagtttctaaggtttcagatagatcattta 14942391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 42092281 - 42092140
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||  |||||||||||||||||||||| |||| ||  ||||| |||||||||||| ||||||||| ||||  ||||     
T  42092281 ttaagtttctaaggtttcagataggtc-ttttaagtttgaagtttgtttcggataggtcttttaagtttctaaggttttagataggtcctttaagtttcg 42092183  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||    
T  42092182 agtttgtttcagataggtcctttctattaacctccgttaagcc 42092140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 27319042 - 27318929
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||||||||||||||| |||| ||  ||||| |||||||||||||||||||||| ||||  |||| ||||| ||| |||||||| ||||||||||    
T  27319042 tttaagtttgaagtttgtttcggataggtcttttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtactttctatca 27318943  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  27318942 acctccgttaagcc 27318929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 39805012 - 39805125
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||||||||||||||| |||| || |||||| |||||||||||||||||||||| ||||  |||| ||||| ||| |||||||||||||||||||    
T  39805012 tttaagtttgaagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtcctttctatca 39805111  T
Q  758 acctccgttaagcc 771  Q
    || || ||||||||    
T  39805112 acttcagttaagcc 39805125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 6641872 - 6641985
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||||||||||||||| ||||    |||||| |||||||| ||||| ||||||| ||||  |||| ||||||||| |||||||||||||||||||    
T  6641872 tttaagtttgaagtttgtttcggatagaccctttaagtttctaagatttcacataggtcctttaagtttcgagtttatttcagataggtcctttctatca 6641971  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  6641972 acctccgttaagcc 6641985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 623 - 756
Target Start/End: Original strand, 30004041 - 30004173
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttag 722  Q
    ||||| |||||||| |||||||| | |||||| |||| ||||||  ||||||||||||||||||  ||||| |||||||||||||||||||||| ||||     
T  30004041 ggtcctttaagtttttaaggttttagatatgtcattt-aagtttcgagtttgtttcagatatgtcttttaagtttctaaggtttcagataggtcctttaa 30004139  T
Q  723 atttcaagtttattttagataggtcctttctatc 756  Q
    ||||| | ||||||| |||||| || ||||||||    
T  30004140 atttcgaatttatttcagatagatcatttctatc 30004173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 624 - 758
Target Start/End: Complemental strand, 2803177 - 2803044
Alignment:
Q  624 gtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttaga 723  Q
    |||| ||||||||||||||||| | ||| ||| ||| ||||||  |||||||||| ||||||| |||||| ||| |||||||||||||||||| ||||      
T  2803177 gtcctttaagtttctaaggtttcatataagtgcttt-aagtttcgagtttgtttcggatatgtcctttaagtttataaggtttcagataggtcctttaag 2803079  T
Q  724 tttcaagtttattttagataggtcctttctatcaa 758  Q
    |||| ||||| ||| ||||||||| ||||||||||    
T  2803078 tttcgagtttgtttcagataggtcatttctatcaa 2803044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 1737612 - 1737499
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||| |||||||||| |||| || |||||| |||||||||||||||||||||  ||||  |||  ||||| ||| ||||| |||||||||||||    
T  1737612 tttaagtttggagtttgtttctgataggtcctttaagtttctaaggtttcagataggtgctttaagttttgagtttgtttcagatatgtcctttctatca 1737513  T
Q  758 acctccgttaagcc 771  Q
    ||||||| ||||||    
T  1737512 acctccgctaagcc 1737499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 8942882 - 8942995
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||||| ||| || |||||| |||||||||||||| ||||||| ||||  |||| ||||| |||  ||||||||||||||||||    
T  8942882 tttaagtttcatgtttgtttcatataggtcctttaagtttctaaggtttcatataggtcttttaagtttcgagtttgtttcggataggtcctttctatca 8942981  T
Q  758 acctccgttaagcc 771  Q
    || |||||||||||    
T  8942982 acttccgttaagcc 8942995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 623 - 771
Target Start/End: Original strand, 27495924 - 27496069
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttag 722  Q
    ||||| ||||||||||||||||| ||||| ||  ||| ||||||||| ||||||||  |||  | |||||| |||| ||||||||| |  |||| ||||     
T  27495924 ggtcctttaagtttctaaggtttcaaataggtccttt-aagtttgaaatttgtttcgaatagatcctttaagtttcaaaggtttcaaa--ggtcctttaa 27496020  T
Q  723 atttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
     |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  27496021 gtttcgagtttgttttagataggtcctttctatcaacctccgttaagcc 27496069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 28574761 - 28574648
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| |  |||||||||||||  |  ||||| |||||||||||||||||||||| ||||  |||| ||||| ||| ||||||||| |||||||||    
T  28574761 tttaagtttcatatttgtttcagatagatcttttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtcatttctatca 28574662  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  28574661 acctccgttaagcc 28574648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 658 - 758
Target Start/End: Complemental strand, 27496179 - 27496079
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| ||||||| |||||| |||||||||||| ||||||||  |||| ||||| ||||| ||| |||||||||||||||||||    
T  27496179 tttaagtttcgagtttgtttcggatatgtcctttaagtttctaaggtttgagataggttctttaaatttcgagtttgtttcagataggtcctttctatca 27496080  T
Q  758 a 758  Q
    |    
T  27496079 a 27496079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 658 - 758
Target Start/End: Complemental strand, 39805235 - 39805135
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| |||| || |||||| |||||||||||| ||||||||||||||  |||| ||||| ||| |||||||||||||||||||    
T  39805235 tttaagtttcgagtttgtttcggataggtcctttaagtttctaaggttttagataggtcatttaagtttcgagtttctttcagataggtcctttctatca 39805136  T
Q  758 a 758  Q
    |    
T  39805135 a 39805135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 623 - 758
Target Start/End: Complemental strand, 2797017 - 2796883
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttag 722  Q
    ||||| ||||||||||||||||| | ||| ||| ||| ||||||  |||||| ||| |||||||  ||||| ||| |||||||||||||||||| ||||     
T  2797017 ggtcctttaagtttctaaggtttcatataagtgcttt-aagtttcgagtttgcttcggatatgtcatttaagtttataaggtttcagataggtcctttaa 2796919  T
Q  723 atttcaagtttattttagataggtcctttctatcaa 758  Q
     |||| ||||| ||| ||||||||||||||||||||    
T  2796918 gtttcgagtttgtttcagataggtcctttctatcaa 2796883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 623 - 758
Target Start/End: Complemental strand, 6642129 - 6641995
Alignment:
Q  623 ggtccattaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttag 722  Q
    ||||| ||||||||||||||||| | ||| ||   |||||||||  |||||||||| |||| || |||||| |||||||||||||||||||||| ||||     
T  6642129 ggtcctttaagtttctaaggtttcagataggt-cctttaagtttcgagtttgtttcggataggtcctttaagtttctaaggtttcagataggtcctttaa 6642031  T
Q  723 atttcaagtttattttagataggtcctttctatcaa 758  Q
     |||| ||||| ||| |||||| |||||||||||||    
T  6642030 gtttcgagtttgtttcagatagttcctttctatcaa 6641995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 18008548 - 18008435
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | ||||||||||||||  | |||||| ||| ||||||||||||| |||| ||||  |||| | ||| ||| ||||||||| |||||||||    
T  18008548 tttaagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcagatcggtcctttaagtttcgaatttgtttcagataggtcatttctatca 18008449  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  18008448 acctccgttaagcc 18008435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 670 - 771
Target Start/End: Original strand, 42375508 - 42375609
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaag 769  Q
    |||||||||  ||| || |||||| ||||||||| |||||||||||| |||| ||||| ||||| ||| ||||||||| ||||||||| |||||||||||    
T  42375508 gtttgtttcgcataggtcctttaagtttctaaggcttcagataggtcctttaaatttcgagtttgtttcagataggtcatttctatcatcctccgttaag 42375607  T
Q  770 cc 771  Q
    ||    
T  42375608 cc 42375609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 658 - 769
Target Start/End: Original strand, 18008194 - 18008305
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||||||||| || |||||||||||||| ||||||||  |||| ||||  |||  ||||| |||  |||||||||||||| |||    
T  18008194 tttaagtttcacgtttgtttcagataggtcctttaaatttctaaagtttcagactggtcctttaagttttgagtttgtttcggataggtcctttctgtca 18008293  T
Q  758 acctccgttaag 769  Q
    ||||||||||||    
T  18008294 acctccgttaag 18008305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 629 - 747
Target Start/End: Original strand, 2796763 - 2796880
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||| |||||||||| ||||||| |||||| ||| |||||||||||||||||| ||||  ||||     
T  2796763 ttaagtttctaaggttttagataggt-cctttaagtttggagtttgtttcggatatgtcctttaagtttttaaggtttcagataggtcctttaagtttcg 2796861  T
Q  729 agtttattttagataggtc 747  Q
    ||||| ||| |||||||||    
T  2796862 agtttgtttcagataggtc 2796880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 42092012 - 42092105
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||||||||| || |||||| |||||||| ||||||||||||| ||||  |||| ||||| ||| |||||||||||||    
T  42092012 tttaagtttcacgtttgtttcagataggtcctttaagtttctaagatttcagataggtcctttaagtttcgagtttgtttcagataggtccttt 42092105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 658 - 769
Target Start/End: Original strand, 21250274 - 21250385
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||||||||| || ||| || ||||||||||||||||||| || ||||  |||| ||||| |||  |||||||||||||| |||    
T  21250274 tttaagtttcaggtttgtttcagataggtccttaaagtttctaaggtttcagatagatcctttatgtttcgagtttgtttcggataggtcctttctgtca 21250373  T
Q  758 acctccgttaag 769  Q
    | || |||||||    
T  21250374 agcttcgttaag 21250385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 629 - 747
Target Start/End: Original strand, 2802924 - 2803041
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||| |||||||||| |||| || |||||| ||| |||||||||||||||||| ||||  ||||     
T  2802924 ttaagtttctaaggttttagataggt-cctttaagtttggagtttgtttcggataggtcctttaagtttttaaggtttcagataggtcctttaagtttcg 2803022  T
Q  729 agtttattttagataggtc 747  Q
    ||||| ||| |||||||||    
T  2803023 agtttgtttcagataggtc 2803041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 670 - 760
Target Start/End: Complemental strand, 5361570 - 5361480
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacc 760  Q
    ||||||||||||||  |  ||||| ||||||||||||||||||| |  |||| ||||| ||||| ||| ||||||||||||||||||||||    
T  5361570 gtttgtttcagatagatcatttaagtttctaaggtttcagatagattctttaaatttcgagtttgtttcagataggtcctttctatcaacc 5361480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 1069126 - 1069218
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    |||||||||  |||||||||| |||| || |||||| ||| |||||||||||||||||| ||||  |||||||||| ||| |||||||||||||    
T  1069126 tttaagtttcgagtttgtttcggataggt-ctttaagtttataaggtttcagataggtcctttaagtttcaagtttgtttcagataggtccttt 1069218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 658 - 771
Target Start/End: Complemental strand, 42375850 - 42375737
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||| ||||| |||||||||  || |||||||| ||||||||| ||||  |||  ||||| |||  |||| ||||||||| |||    
T  42375850 tttaagtttcacgtttgttttagataggttctttaagcttttaaggttttagataggtcctttaagttttgagtttgtttcggatatgtcctttctgtca 42375751  T
Q  758 acctccgttaagcc 771  Q
    ||||||||||||||    
T  42375750 acctccgttaagcc 42375737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 629 - 769
Target Start/End: Complemental strand, 21250656 - 21250517
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| || |||| ||||||  ||||||||||  ||| ||  ||||| |||||||| ||||||||||||| ||||  ||||     
T  21250656 ttaagtttctaaggttttagataggtcattt-aagtttcgagtttgtttcgaataggtcttttaagtttctaagatttcagataggtcctttaagtttcg 21250558  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaag 769  Q
    ||||| |||  |||||||| ||| | |||||||||||||||    
T  21250557 agtttgtttcggataggtcatttatgtcaacctccgttaag 21250517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 703 - 771
Target Start/End: Complemental strand, 40807965 - 40807897
Alignment:
Q  703 gtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| |||||||| ||||  |||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  40807965 gtttcggataggtcctttaagtttcgagtttgtttcagataggtcctttctatcaacctccgttaagcc 40807897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 658 - 769
Target Start/End: Complemental strand, 38085419 - 38085308
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| || | || |||||||||||||||||||||||||||||  |||  |||  ||||| |||  |||| ||| ||||| |||    
T  38085419 tttaagttttgagtttgtttcggagaggtcctttaaatttctaaggtttcagataggtccgttaagttttgagtttgtttcggataagtcttttctgtca 38085320  T
Q  758 acctccgttaag 769  Q
    ||||||||||||    
T  38085319 acctccgttaag 38085308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 670 - 751
Target Start/End: Complemental strand, 6642143 - 6642062
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    |||||||| ||||| || |||||| |||||||||||||||||||||| ||||  |||| ||||| |||  ||||||||||||    
T  6642143 gtttgttttagataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggataggtccttt 6642062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 747
Target Start/End: Complemental strand, 27319102 - 27319013
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtc 747  Q
    ||||||||| | ||||||||||||||  | ||||||||||||||||||||||||| ||| ||||  ||| |||||| |||  ||||||||    
T  27319102 tttaagttttatgtttgtttcagatagatcctttaaatttctaaggtttcagataagtcctttaagtttgaagtttgtttcggataggtc 27319013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 39804952 - 39805045
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||| ||||||||||||||||| |||| ||||  ||| |||||| |||  ||||||||||||    
T  39804952 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagatgggtcctttaagtttgaagtttgtttcggataggtccttt 39805045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 658 - 721
Target Start/End: Complemental strand, 21250688 - 21250625
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | ||||||||||||||  | |||||| |||||||||||| ||||||||||||||    
T  21250688 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggttttagataggtcattta 21250625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 658 - 721
Target Start/End: Original strand, 27495898 - 27495961
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | |||||||||||||| || |||||| |||||||||||||| ||||||| ||||    
T  27495898 tttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcaaataggtccttta 27495961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 661 - 751
Target Start/End: Complemental strand, 1069366 - 1069276
Alignment:
Q  661 aagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    |||||| | |||||||||  ||| || |||||| |||||||||||||||||||||| ||||  |||| ||||| ||| |||||||| ||||    
T  1069366 aagttttacgtttgtttcttataagtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggttcttt 1069276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 708
Target Start/End: Complemental strand, 2803204 - 2803154
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttca 708  Q
    ||||||||| | ||||||||||||||||| |||||| ||||||||||||||    
T  2803204 tttaagtttcacgtttgtttcagatatgtcctttaagtttctaaggtttca 2803154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 8943264 - 8943123
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||  |||||||| || ||| ||  ||||| ||| |||||||||||||| ||| ||||  ||||     
T  8943264 ttaagtttctaaggtttcagataggt-tctttaagtttcgagtttgttccaaataggtcatttaagtttataaggtttcagataagtcctttaagtttcg 8943166  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| | | ||||||||| |||||||||||||| | ||||||    
T  8943165 agtttgtatcagataggtcttttctatcaacctctgctaagcc 8943123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 670 - 720
Target Start/End: Original strand, 27318862 - 27318912
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattt 720  Q
    |||||||||| |||||| |||||| ||| ||||||||||||||||||||||    
T  27318862 gtttgtttcaaatatgtcctttaagtttataaggtttcagataggtcattt 27318912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 743
Target Start/End: Original strand, 20429681 - 20429766
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagata 743  Q
    |||||||||  |||||||||  |||| || |||||| |||||||||||||||||||||| ||||  |||| ||||| ||| |||||    
T  20429681 tttaagttttgagtttgttttggataagtcctttaagtttctaaggtttcagataggtcttttaagtttcgagtttctttcagata 20429766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 767
Target Start/End: Original strand, 28571056 - 28571164
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    ||||||||| | |||||||||||||| || |||||| |||||||| ||||| ||||||| ||||  |||| ||||| |||  |||||| | ||||| |||    
T  28571056 tttaagtttcacgtttgtttcagataggtcctttaagtttctaagctttcatataggtc-tttaagtttcgagtttgtttcggataggccgtttctgtca 28571154  T
Q  758 acctccgtta 767  Q
    ||||| ||||    
T  28571155 acctctgtta 28571164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 670 - 751
Target Start/End: Complemental strand, 40808029 - 40807948
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    |||| |||||||||  | |||||| |||||||||||||||||||||| ||||  ||| |||||| |||  ||||||||||||    
T  40808029 gtttatttcagatagatcctttaactttctaaggtttcagataggtcctttaagtttgaagtttgtttcggataggtccttt 40807948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 747
Target Start/End: Complemental strand, 42092313 - 42092224
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtc 747  Q
    ||||||||| | |||||||| |||||  | |||||| |||||||||||||||||||||| ||||  ||| |||||| |||  ||||||||    
T  42092313 tttaagtttcatgtttgttttagatagatcctttaagtttctaaggtttcagataggtcttttaagtttgaagtttgtttcggataggtc 42092224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 703 - 771
Target Start/End: Original strand, 1069201 - 1069269
Alignment:
Q  703 gtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    |||||||||||||| ||||  |||||||||| ||| ||||| || |||||||||||||||  |||||||    
T  1069201 gtttcagataggtcctttaagtttcaagtttgtttcagatatgttctttctatcaacctctcttaagcc 1069269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 721
Target Start/End: Original strand, 2796731 - 2796794
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | ||||||||||||||  | |||||| |||||||||||| ||||||||| ||||    
T  2796731 tttaagtttcatgtttgtttcagatagatcctttaagtttctaaggttttagataggtccttta 2796794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 743
Target Start/End: Original strand, 30004017 - 30004100
Alignment:
Q  660 taagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagata 743  Q
    ||||||| | |||||||||||||| || |||||| ||| |||||||| ||||| ||||||||  |||| ||||| ||| |||||    
T  30004017 taagttttacgtttgtttcagataggtcctttaagtttttaaggttttagatatgtcatttaagtttcgagtttgtttcagata 30004100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 703 - 758
Target Start/End: Original strand, 40807832 - 40807887
Alignment:
Q  703 gtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaa 758  Q
    ||||| |||||||| ||||  |||||||||| ||| ||||||||||||||||||||    
T  40807832 gtttcggataggtcgtttaagtttcaagtttgtttcagataggtcctttctatcaa 40807887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 713
Target Start/End: Original strand, 42375436 - 42375491
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagatag 713  Q
    ||||||||| | |||||||| |||||| | |||||||||| |||||||||||||||    
T  42375436 tttaagtttcatgtttgtttaagatatatcctttaaatttttaaggtttcagatag 42375491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 658 - 708
Target Start/End: Complemental strand, 2797043 - 2796993
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttca 708  Q
    ||||||||| | |||||||||||||| || |||||| ||||||||||||||    
T  2797043 tttaagtttcacgtttgtttcagataggtcctttaagtttctaaggtttca 2796993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 659 - 721
Target Start/End: Original strand, 6641813 - 6641875
Alignment:
Q  659 ttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    |||||||| | ||||||||||||||  | |||||| |||||||| ||||||||||||| ||||    
T  6641813 ttaagtttcatgtttgtttcagatagatcctttaagtttctaagatttcagataggtccttta 6641875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 670 - 708
Target Start/End: Original strand, 35171718 - 35171756
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttca 708  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  35171718 gtttgtttcagatatgtcctttaaatttctaagatttca 35171756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 691
Target Start/End: Original strand, 1069216 - 1069249
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttcttt 691  Q
    ||||||||| ||||||||||||||||||||||||    
T  1069216 tttaagtttcaagtttgtttcagatatgttcttt 1069249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 2802892 - 2802985
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  |  ||||| |||||||||||| ||||||||| ||||  |||  ||||| |||  ||||||||||||    
T  2802892 tttaagtttcatgtttgtttcagatagatcttttaagtttctaaggttttagataggtcctttaagtttggagtttgtttcggataggtccttt 2802985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 715
Target Start/End: Complemental strand, 8943284 - 8943239
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggt 715  Q
    ||||||||||||||  | |||||| |||||||||||||||||||||    
T  8943284 gtttgtttcagatagatcctttaagtttctaaggtttcagataggt 8943239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 670 - 747
Target Start/End: Original strand, 40807768 - 40807845
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtc 747  Q
    ||||||||||||||  | |||||| |||||||||||||||||| ||| ||||  |||| ||||| |||  ||||||||    
T  40807768 gtttgtttcagataaatcctttaagtttctaaggtttcagataagtcctttaagtttcgagtttgtttcggataggtc 40807845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 63; Significance: 6e-27; HSPs: 4)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 629 - 771
Target Start/End: Original strand, 23703 - 23844
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    |||||||| |||||||| | ||| || |||| || ||| ||||||||||| |||| || |||||||||||| |||||||||||| ||||||||  |||||    
T  23703 ttaagtttttaaggtttcagataagtcatttaaa-tttaaagtttgtttcggataggtcctttaaatttctcaggtttcagatatgtcatttaagtttca 23801  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| |||||||| |||| |||||||||||||||||||    
T  23802 agtttgtttcagataggtactttttatcaacctccgttaagcc 23844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 662 - 758
Target Start/End: Complemental strand, 23950 - 23854
Alignment:
Q  662 agtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatcaa 758  Q
    ||||| ||||||||||| |||| ||||||||| ||| |||||||||||||||||| ||||  |||| |||||  || ||||||||| ||||||||||    
T  23950 agtttcaagtttgtttcggataggttctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgcttcagataggtcatttctatcaa 23854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 24014 - 23921
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | ||||||||||||||  | |||||||||||||||||||||||||| || |||   |||||||||| |||  ||||||| ||||    
T  24014 tttaagtttcacgtttgtttcagatagatcctttaaatttctaaggtttcagatagatcctttcagtttcaagtttgtttcggataggttcttt 23921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 751
Target Start/End: Original strand, 23671 - 23764
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    ||||||||| | |||||||| |||||  |  ||||| ||| |||||||||||||| |||||||| |||| |||||| |||  ||||||||||||    
T  23671 tttaagtttcatgtttgttttagatagatcatttaagtttttaaggtttcagataagtcatttaaatttaaagtttgtttcggataggtccttt 23764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 658 - 771
Target Start/End: Original strand, 202357 - 202470
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||| |||||||||| |||| ||  ||||| |||||||||||||||||||||| ||||  |||||||||| ||| |||||| ||||||||||||    
T  202357 tttaagtttggagtttgtttcggataggtcttttaagtttctaaggtttcagataggtcctttaagtttcaagtttgtttcagatagctcctttctatca 202456  T
Q  758 acctccgttaagcc 771  Q
    || |||||||||||    
T  202457 acatccgttaagcc 202470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 658 - 758
Target Start/End: Complemental strand, 202580 - 202480
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  |||||||||| ||||  | |||||| |||||||||||||||||||||| ||||  |||| ||||| ||| |||||||||||||||||||    
T  202580 tttaagtttcgagtttgtttcggatagatcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcagataggtcctttctatca 202481  T
Q  758 a 758  Q
    |    
T  202480 a 202480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 629 - 771
Target Start/End: Complemental strand, 22103 - 21962
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    |||||||||||| |||| | ||| || |||| ||||||  ||||||||||  ||| || |||||| ||||||||||||||||||| || |||| |||||     
T  22103 ttaagtttctaaagtttcagataggtcattt-aagtttcgagtttgtttcgtataggtcctttaagtttctaaggtttcagatagatcctttaaatttcg 22005  T
Q  729 agtttattttagataggtcctttctatcaacctccgttaagcc 771  Q
    ||||| ||| |||||| ||||||||||||||||||||||||||    
T  22004 agtttgtttcagatagatcctttctatcaacctccgttaagcc 21962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 658 - 721
Target Start/End: Original strand, 21832 - 21895
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | ||||||||| |||| || |||||| |||||| ||||||||||||||||||||    
T  21832 tttaagtttcacgtttgtttcggataggtcctttaagtttctacggtttcagataggtcattta 21895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 58; Significance: 6e-24; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 629 - 758
Target Start/End: Original strand, 60523 - 60651
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttca 728  Q
    ||||||||||||||||| | ||| ||   |||||||||  ||||||||||  |||||| ||||||  ||||||||||||||||||||| ||||  |||||    
T  60523 ttaagtttctaaggtttcagataggt-cctttaagtttcgagtttgtttcgaatatgtcctttaagattctaaggtttcagataggtcctttatgtttca 60621  T
Q  729 agtttattttagataggtcctttctatcaa 758  Q
    ||||| ||||||||||||||||||||||||    
T  60622 agtttgttttagataggtcctttctatcaa 60651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 658 - 721
Target Start/End: Original strand, 60491 - 60554
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | |||||||||||||| || |||||| |||||||||||||||||||||| ||||    
T  60491 tttaagtttcacgtttgtttcagataggtactttaagtttctaaggtttcagataggtccttta 60554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 45; Significance: 3e-16; HSPs: 3)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 658 - 758
Target Start/End: Original strand, 32255 - 32355
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  ||||| ||||||||| || |||||| |||||||||||||||||| ||| ||||  |||| ||||| ||| ||||| |||||||||||||    
T  32255 tttaagtttcgagtttctttcagataggtcctttaagtttctaaggtttcagataagtcctttaagtttcgagtttgtttcagataagtcctttctatca 32354  T
Q  758 a 758  Q
    |    
T  32355 a 32355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 670 - 747
Target Start/End: Complemental strand, 32495 - 32419
Alignment:
Q  670 gtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtc 747  Q
    |||||||||||||| | ||||||| |||||||||||||||||| ||||||||  ||| |||||| ||| |||||||||    
T  32495 gtttgtttcagata-gatctttaagtttctaaggtttcagatatgtcatttaagtttgaagtttgtttcagataggtc 32419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 629 - 683
Target Start/End: Complemental strand, 32476 - 32423
Alignment:
Q  629 ttaagtttctaaggtttaaaatatgtgattttaagtttgaagtttgtttcagata 683  Q
    ||||||||||||||||| | |||||| |||| |||||||||||||||||||||||    
T  32476 ttaagtttctaaggtttcagatatgtcattt-aagtttgaagtttgtttcagata 32423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 3)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 658 - 758
Target Start/End: Complemental strand, 22468 - 22368
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtcctttctatca 757  Q
    |||||||||  ||||||||||  |||||| ||||||||||||||||||||||||| ||  ||||  || | ||||| ||| ||||||||| |||||||||    
T  22468 tttaagtttcgagtttgtttcgaatatgtcctttaaatttctaaggtttcagatatgttttttaagttacgagtttgtttcagataggtcatttctatca 22369  T
Q  758 a 758  Q
    |    
T  22368 a 22368  T

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Target: scaffold0182; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 657 - 713
Target Start/End: Complemental strand, 22529 - 22473
Alignment:
Q  657 ttttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagatag 713  Q
    |||||||||| | |||||||||||||| || |||||||||||||| |||||||||||    
T  22529 ttttaagtttaacgtttgtttcagataggtcctttaaatttctaaagtttcagatag 22473  T

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Target: scaffold0182; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 751
Target Start/End: Complemental strand, 23488 - 23395
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagataggtccttt 751  Q
    |||||||||  ||||||||||| |||  | |||||| |||||||| ||||||||||||| ||||  |||  ||||| |||  ||||||||||||    
T  23488 tttaagtttcgagtttgtttcaaatagatcctttaagtttctaagatttcagataggtcctttaagtttggagtttgtttcggataggtccttt 23395  T

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Target: scaffold0062 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 721
Target Start/End: Original strand, 11733 - 11796
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcattta 721  Q
    ||||||||| | ||||||||||||||  | |||||| |||| ||||||||||||||||| ||||    
T  11733 tttaagtttcatgtttgtttcagatagatcctttaagtttcgaaggtttcagataggtccttta 11796  T

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Target: scaffold0062; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 743
Target Start/End: Original strand, 11793 - 11878
Alignment:
Q  658 tttaagtttgaagtttgtttcagatatgttctttaaatttctaaggtttcagataggtcatttagatttcaagtttattttagata 743  Q
    |||||||||| |||||||||| |||| || |||||||||||| || ||||| ||| ||| ||||  |||| ||||| ||| |||||    
T  11793 tttaagtttggagtttgtttcggataagtcctttaaatttcttagatttcatatatgtcctttaagtttcgagtttgtttcagata 11878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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