View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17831_low_22 (Length: 220)
Name: NF17831_low_22
Description: NF17831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17831_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 18 - 204
Target Start/End: Complemental strand, 45746763 - 45746577
Alignment:
| Q |
18 |
atgaaggtgaatgttaaatatcatgttccattttcttttaaaaatctgcactcgcgatctgagttgtggcattaaggtttttaatgtctccacaacaagg |
117 |
Q |
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| T |
45746763 |
atgaaggtgaatgttaaatatcatgttccattttcttttaaaaatctgcagtcgcgatctgagttgcggcattaaggtttttaatgtctccacaacaagg |
45746664 |
T |
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| Q |
118 |
ttgcctaagctgcttttgtttgtgattctccataatatcaaagattacaaatttgatttaaaaacttgttaaacacaacagttattg |
204 |
Q |
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| T |
45746663 |
ttgcctaagccgcttttgtttgtgattctccataatatcaaagattacaaatgtgatttaaaaacttgttaaacacaacagttattg |
45746577 |
T |
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