View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17833_high_120 (Length: 227)
Name: NF17833_high_120
Description: NF17833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17833_high_120 |
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Alignment Details
Target: chr2 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 23 - 212
Target Start/End: Original strand, 6323931 - 6324113
Alignment:
| Q |
23 |
gttagaatattaacaataaaaattatatagtattgcccttcaactcataatgtaaactaggattgcgagatgaaatgctaattggaatgttacaattacc |
122 |
Q |
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| T |
6323931 |
gttagaatattaacaataaaaattatatagtattgcccttcaactcataatgtaaactaggattgcgagatgaaatgctaattggaatgttacaattacc |
6324030 |
T |
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| Q |
123 |
attgagatttgagaatgaaatatgaaactttttgagttaaggcgagaacaaaagttgtatagtattgccattaccgacaattaccctttg |
212 |
Q |
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| T |
6324031 |
a-------ttgagaatgaaatatgaaactttttgagttaaggcgagaacaaaagttgtatagtattgccattaccgacaattaccctttg |
6324113 |
T |
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