View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17833_high_6 (Length: 696)

Name: NF17833_high_6
Description: NF17833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17833_high_6
NF17833_high_6
[»] chr5 (16 HSPs)
chr5 (440-669)||(15532200-15532429)
chr5 (442-669)||(15542384-15542611)
chr5 (443-684)||(33575091-33575331)
chr5 (440-684)||(22159746-22159992)
chr5 (442-683)||(11988864-11989108)
chr5 (440-684)||(14616429-14616672)
chr5 (440-684)||(34405850-34406094)
chr5 (438-544)||(26711462-26711567)
chr5 (438-544)||(26981199-26981304)
chr5 (440-684)||(7649942-7650185)
chr5 (538-672)||(26712439-26712574)
chr5 (538-672)||(26982177-26982312)
chr5 (440-558)||(2499762-2499882)
chr5 (437-558)||(21680602-21680724)
chr5 (449-507)||(14015916-14015974)
chr5 (471-507)||(32838166-32838202)
[»] chr2 (15 HSPs)
chr2 (440-669)||(31528406-31528635)
chr2 (440-666)||(13710091-13710315)
chr2 (446-684)||(40017981-40018218)
chr2 (450-684)||(31626551-31626784)
chr2 (440-684)||(16294900-16295143)
chr2 (440-684)||(23673345-23673588)
chr2 (440-684)||(36326928-36327171)
chr2 (172-360)||(34977444-34977630)
chr2 (235-360)||(19913665-19913790)
chr2 (258-360)||(19915273-19915375)
chr2 (440-684)||(32575685-32575930)
chr2 (440-531)||(24384925-24385018)
chr2 (440-507)||(33310935-33311003)
chr2 (440-549)||(29436003-29436113)
chr2 (440-506)||(40258905-40258971)
[»] chr6 (23 HSPs)
chr6 (440-684)||(13017189-13017433)
chr6 (440-684)||(22221726-22221967)
chr6 (440-684)||(22247561-22247802)
chr6 (440-684)||(14790620-14790864)
chr6 (438-684)||(14795648-14795894)
chr6 (550-684)||(30978321-30978455)
chr6 (471-684)||(15535058-15535270)
chr6 (448-684)||(19664674-19664909)
chr6 (566-684)||(16883677-16883795)
chr6 (440-684)||(1838475-1838720)
chr6 (564-684)||(20527286-20527407)
chr6 (510-682)||(15540574-15540744)
chr6 (623-684)||(27649104-27649165)
chr6 (440-684)||(32427303-32427544)
chr6 (606-684)||(32704421-32704498)
chr6 (566-641)||(11183962-11184037)
chr6 (630-684)||(12980682-12980736)
chr6 (632-684)||(12983571-12983623)
chr6 (439-506)||(19476295-19476362)
chr6 (271-313)||(15483602-15483644)
chr6 (440-504)||(2379522-2379586)
chr6 (440-507)||(7559850-7559920)
chr6 (640-672)||(7769588-7769620)
[»] chr3 (15 HSPs)
chr3 (440-684)||(22626312-22626554)
chr3 (440-684)||(11138570-11138812)
chr3 (440-672)||(39563510-39563742)
chr3 (440-549)||(20536333-20536445)
chr3 (440-684)||(13979488-13979730)
chr3 (625-684)||(46731496-46731555)
chr3 (440-550)||(46731589-46731699)
chr3 (440-558)||(19869223-19869343)
chr3 (497-550)||(35366510-35366562)
chr3 (562-641)||(50096825-50096904)
chr3 (440-507)||(50461303-50461371)
chr3 (440-507)||(3306144-3306213)
chr3 (440-506)||(48063791-48063857)
chr3 (438-486)||(25442611-25442659)
chr3 (439-507)||(28331064-28331132)
[»] scaffold0440 (1 HSPs)
scaffold0440 (440-684)||(9865-10109)
[»] chr7 (22 HSPs)
chr7 (440-684)||(23759609-23759852)
chr7 (446-681)||(11279496-11279730)
chr7 (440-684)||(36222309-36222552)
chr7 (438-684)||(294866-295108)
chr7 (440-684)||(33312996-33313239)
chr7 (448-684)||(46846320-46846556)
chr7 (440-685)||(3861907-3862151)
chr7 (440-684)||(6967149-6967393)
chr7 (440-684)||(17866353-17866597)
chr7 (440-684)||(24783410-24783654)
chr7 (563-684)||(23313383-23313504)
chr7 (547-684)||(17863202-17863338)
chr7 (567-684)||(23107989-23108106)
chr7 (634-684)||(36843131-36843181)
chr7 (623-684)||(9765803-9765864)
chr7 (440-555)||(17857880-17857996)
chr7 (440-507)||(6603732-6603800)
chr7 (439-507)||(8277271-8277339)
chr7 (440-558)||(3540924-3541042)
chr7 (440-507)||(16166023-16166090)
chr7 (440-506)||(37165917-37165983)
chr7 (440-527)||(38431669-38431757)
[»] chr4 (20 HSPs)
chr4 (440-632)||(12172025-12172218)
chr4 (439-684)||(2541886-2542129)
chr4 (174-352)||(19799000-19799176)
chr4 (440-684)||(647203-647447)
chr4 (161-360)||(8124815-8125013)
chr4 (440-684)||(650475-650719)
chr4 (235-352)||(19807113-19807230)
chr4 (448-684)||(26062698-26062937)
chr4 (174-360)||(17127241-17127426)
chr4 (174-345)||(17132133-17132303)
chr4 (633-684)||(11649426-11649477)
chr4 (638-684)||(26060589-26060635)
chr4 (440-507)||(24150961-24151028)
chr4 (440-507)||(38283247-38283314)
chr4 (563-616)||(11649328-11649382)
chr4 (439-556)||(19929126-19929243)
chr4 (449-507)||(29325110-29325168)
chr4 (449-507)||(40616583-40616641)
chr4 (440-507)||(18911793-18911861)
chr4 (440-558)||(33400075-33400195)
[»] scaffold0264 (1 HSPs)
scaffold0264 (439-684)||(24184-24426)
[»] chr8 (15 HSPs)
chr8 (440-673)||(12575300-12575532)
chr8 (440-684)||(14418467-14418707)
chr8 (563-686)||(41778865-41778987)
chr8 (605-684)||(13097022-13097100)
chr8 (633-684)||(41836415-41836466)
chr8 (440-558)||(9467309-9467429)
chr8 (625-673)||(44008308-44008356)
chr8 (634-673)||(14418396-14418435)
chr8 (440-505)||(10498016-10498081)
chr8 (439-507)||(16954060-16954129)
chr8 (438-506)||(31284962-31285030)
chr8 (449-507)||(18825665-18825723)
chr8 (563-616)||(41836317-41836371)
chr8 (439-527)||(453863-453952)
chr8 (442-506)||(44026858-44026922)
[»] chr1 (21 HSPs)
chr1 (440-684)||(10764921-10765165)
chr1 (440-684)||(13493264-13493508)
chr1 (441-684)||(1936628-1936873)
chr1 (439-684)||(13495989-13496233)
chr1 (563-684)||(34066346-34066467)
chr1 (439-684)||(32505856-32506098)
chr1 (563-684)||(16190301-16190421)
chr1 (440-684)||(39546244-39546486)
chr1 (34-85)||(47746460-47746511)
chr1 (19-85)||(47718646-47718716)
chr1 (562-641)||(8435280-8435359)
chr1 (634-684)||(27282301-27282351)
chr1 (440-549)||(49716625-49716735)
chr1 (632-684)||(22456684-22456736)
chr1 (449-507)||(45960522-45960580)
chr1 (647-684)||(49147899-49147936)
chr1 (443-527)||(49720129-49720214)
chr1 (632-672)||(15297345-15297385)
chr1 (640-672)||(21153269-21153301)
chr1 (440-507)||(31205126-31205194)
chr1 (440-527)||(34552438-34552525)
[»] scaffold0363 (2 HSPs)
scaffold0363 (440-684)||(11-251)
scaffold0363 (634-673)||(283-322)
[»] scaffold0567 (1 HSPs)
scaffold0567 (625-684)||(5995-6054)
[»] scaffold0068 (1 HSPs)
scaffold0068 (437-558)||(33727-33849)
[»] scaffold0352 (2 HSPs)
scaffold0352 (631-684)||(2794-2847)
scaffold0352 (448-550)||(2627-2728)
[»] scaffold0250 (1 HSPs)
scaffold0250 (440-507)||(19684-19752)
[»] scaffold0766 (1 HSPs)
scaffold0766 (449-535)||(3656-3739)
[»] scaffold0500 (1 HSPs)
scaffold0500 (625-684)||(2695-2754)
[»] scaffold0063 (1 HSPs)
scaffold0063 (625-684)||(7177-7236)
[»] scaffold0056 (1 HSPs)
scaffold0056 (440-513)||(65087-65160)


Alignment Details
Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 440 - 669
Target Start/End: Original strand, 15532200 - 15532429
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 539  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15532200 tgatagatatttggcatgtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 15532299  T
Q  540 aaaggatgtataaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagttttt-agaaaattag 638  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |    
T  15532300 aaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-g 15532398  T
Q  639 agagaagtatggttaagaccttcgaatcctc 669  Q
    ||||||||||||||||| |||||||||||||    
T  15532399 agagaagtatggttaagtccttcgaatcctc 15532429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 442 - 669
Target Start/End: Original strand, 15542384 - 15542611
Alignment:
Q  442 atagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaaaa 541  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15542384 atagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttaacaatttcattattaaaa 15542483  T
Q  542 aggatgtataaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagttttt-agaaaattagag 640  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||    
T  15542484 aggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gag 15542582  T
Q  641 agaagtatggttaagaccttcgaatcctc 669  Q
    ||||||||||||||| |||||||||||||    
T  15542583 agaagtatggttaagtccttcgaatcctc 15542611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 443 - 684
Target Start/End: Complemental strand, 33575331 - 33575091
Alignment:
Q  443 tagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaaaaa 542  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||    
T  33575331 tagaaatttggcaagtgaaccaaattcaatcgaagtaataaaaaattcgttttcacgaggactgtatttaacttctatttagcaattttattattaaaaa 33575232  T
Q  543 ggatgtataaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattagagag 642  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||    
T  33575231 ggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttagaaaatt-gagag 33575133  T
Q  643 aagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||| |||||||||||||||||  |||||||||    
T  33575132 aagtatggttaagtccttcgaatcctccgaagctctcctatg 33575091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 440 - 684
Target Start/End: Complemental strand, 22159992 - 22159746
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 539  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || | ||    
T  22159992 tgatagatatttgacaagtgtaccaaattcgatcgaagtaataaaaaatttgtttccacgaggactgtatttaacttctacttagcaatttctttgtcaa 22159893  T
Q  540 aaaggatgtata--aatttatattagtgccctaggcagtt-gagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaat 635  Q
    ||||||||||||  || ||  |    |||||||||||||| || | | |||  |||  ||||| ||| | ||||||||||| |||| ||||| |||| ||    
T  22159892 aaaggatgtatattaaattcaaaggttgccctaggcagttggattggtttttataaagtaaacgtaaat-aaaacaataaa-aattggttttaagaatat 22159795  T
Q  636 tagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||| ||||||||||||||| |||||||||||| ||||||||||    
T  22159794 tagagagaaatatggttaagacctttgaatcctccgaagttctcctatg 22159746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 442 - 683
Target Start/End: Original strand, 11988864 - 11989108
Alignment:
Q  442 atagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttcta--cttagcaatttcattattaa 539  Q
    ||||||||||| |||||||| ||||||| |||||||||||||| |||||||||||||||| || ||  ||||||||||  |||||||||||||||| |||    
T  11988864 atagatatttgacaagtgaatcaaattcaatcgaagtaataaataattcgtttccacgagaaccgttcttaacttctatacttagcaatttcattagtaa 11988963  T
Q  540 aaaggatgtata--aatttatattagtgccctaggcagttgagttgattta-gtaacataaactaattaaaaacaataaagaattagtttttagaaaatt 636  Q
     ||||| |||||  || ||  ||  || ||||||||||||||||||||||  |||||||||||  ||||||||| |||||  ||| | ||||||||||||    
T  11988964 taaggacgtatattaaattcaatg-gtcccctaggcagttgagttgatttttgtaacataaacagattaaaaacgataaaagatt-gattttagaaaatt 11989061  T
Q  637 agagagaagtatggttaagaccttcgaatcctccgaaattctcctat 683  Q
    ||||||||||| |||||||||||||||||||||| || |||||||||    
T  11989062 agagagaagtaaggttaagaccttcgaatcctccaaagttctcctat 11989108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 440 - 684
Target Start/End: Original strand, 14616429 - 14616672
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    ||||||| |||||||||||||||||||  | |||||||||||||| |||||||| ||||||||||| ||  |||| |||||||  |||||||| |||| |    
T  14616429 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 14616527  T
Q  539 aaaaggatgtataaatttatatt-agtgccctaggcagttgagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaatt 636  Q
    |||||||||||| |||||||||| | | ||||||| |||||||||| ||| ||||||||||| ||| ||||| ||||||| | ||  |||| |||| |||    
T  14616528 aaaaggatgtatgaatttatattgattaccctaggaagttgagttgtttt-gtaacataaacgtaaataaaa-caataaa-agttgattttaagaatatt 14616624  T
Q  637 agagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  14616625 agagagaagtatggttaagacctttgaatcctccgaagttctcctatg 14616672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 440 - 684
Target Start/End: Complemental strand, 34406094 - 34405850
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    |||||||||||||||||||| ||||||  | ||||||||| ||| ||| ||||| ||||| ||||| ||  |||| |||||||  |||||||| |||| |    
T  34406094 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacaaggaccgttgttaatttctactcggcaatttctttatca 34405995  T
Q  539 aaaaggatgtataaatttatatt-agtgccctaggcagttgagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaatt 636  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| | | ||||||||||| ||| ||||| ||||||| | || ||||| |||| |||    
T  34405994 aaaaggatgtataaatttatattgattgccctaggcagttgagttgttgt-gtaacataaacgtaaataaaa-caataaa-agttggttttcagaatatt 34405898  T
Q  637 agagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  34405897 agagagaagtatggttaagaccttcaaatcctctgaagttctcctatg 34405850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 438 - 544
Target Start/End: Original strand, 26711462 - 26711567
Alignment:
Q  438 actgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatt 537  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  26711462 actgatagatatttggcaagtgaaccaaattcaattgaagtaataaaaaattcgtttccacgaggactgta-ttaacttctacttagcaatttcattatc 26711560  T
Q  538 aaaaagg 544  Q
    |||||||    
T  26711561 aaaaagg 26711567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 438 - 544
Target Start/End: Original strand, 26981199 - 26981304
Alignment:
Q  438 actgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatt 537  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  26981199 actgatagatatttggcaagtgaaccaaattcaattgaagtaataaaaaattcgtttccacgaggactgta-ttaacttctacttagcaatttcattatc 26981297  T
Q  538 aaaaagg 544  Q
    |||||||    
T  26981298 aaaaagg 26981304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 440 - 684
Target Start/End: Original strand, 7649942 - 7650185
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    ||||||| ||||| |||||||||||||  | |||||||||||||| |||||||| | ||||||||| ||  |||| ||||||| | ||||||| |||| |    
T  7649942 tgatagagatttgacaagtgaaccaaaa-ctatcgaagtaataaataaattcgtattcacgaggaccgttgttaatttctactcaacaatttctttatca 7650040  T
Q  539 aaaaggatgtataaatttatatt-agtgccctaggcagttgagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaatt 636  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||| ||| | ||||||||||| | ||  |||| |||| |||    
T  7650041 aaaaggatgtataaatttatattgattgccctaggcagttgagttg-ttttgtaacataaacgtaaat-aaaacaataaa-agttgcttttaagaatatt 7650137  T
Q  637 agagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||||||||||| || ||||||| |||| |||| |||||    
T  7650138 agagagaagtatggttaagacatttgaatcctacgaagttcttctatg 7650185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 538 - 672
Target Start/End: Original strand, 26712439 - 26712574
Alignment:
Q  538 aaaaaggatgtataaa-tttatattagtgccctaggcagttgagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaat 635  Q
    ||||||||||| |||| |||||||||||||||||| ||||||||||||||| |||||||||||  ||||||||| | ||||  ||| | |||||||||||    
T  26712439 aaaaaggatgtgtaaaatttatattagtgccctagacagttgagttgattttgtaacataaacaaaattaaaaatagtaaaagatt-ggttttagaaaat 26712537  T
Q  636 tagagagaagtatggttaagaccttcgaatcctccga 672  Q
      |||||||| ||||||||| | ||||||||||||||    
T  26712538 ctgagagaagaatggttaagtctttcgaatcctccga 26712574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 538 - 672
Target Start/End: Original strand, 26982177 - 26982312
Alignment:
Q  538 aaaaaggatgtataaa-tttatattagtgccctaggcagttgagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaat 635  Q
    ||||||||||| |||| |||||||||||||||||| ||||||||||||||| |||||||||||  ||||||||| | ||||  ||| | |||||||||||    
T  26982177 aaaaaggatgtgtaaaatttatattagtgccctagacagttgagttgattttgtaacataaacaaaattaaaaatagtaaaagatt-ggttttagaaaat 26982275  T
Q  636 tagagagaagtatggttaagaccttcgaatcctccga 672  Q
      |||||||| ||||||||| | ||||||||||||||    
T  26982276 ctgagagaagaatggttaagtctttcgaatcctccga 26982312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 440 - 558
Target Start/End: Original strand, 2499762 - 2499882
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataa-aaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    |||||||||||||||||||| ||||||    ||||||||| ||| ||| ||||| ||||||||||| ||  |||| ||||||||||||| ||| |||  |    
T  2499762 tgatagatatttggcaagtgtaccaaaagatatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaa 2499861  T
Q  539 aaaaggatgta-taaatttat 558  Q
     |||||||||| |||||||||    
T  2499862 taaaggatgtagtaaatttat 2499882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 437 - 558
Target Start/End: Complemental strand, 21680724 - 21680602
Alignment:
Q  437 cactgatagatatttggcaagtgaaccaaattcgatcgaagtaataa-aaaattcgtttccacgaggactgtatttaacttctacttagcaatttcatta 535  Q
    ||||||||||||||||||||||| ||||||  | ||||||||| ||| ||| || || ||||||||||| ||  |||| ||||||||||||| ||| |||    
T  21680724 cactgatagatatttggcaagtgtaccaaa-actatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctacttagcaagttcgtta 21680626  T
Q  536 ttaaaaaggatgta-taaatttat 558  Q
      | |||||||||| |||||||||    
T  21680625 aaataaaggatgtactaaatttat 21680602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 449 - 507
Target Start/End: Original strand, 14015916 - 14015974
Alignment:
Q  449 tttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgt 507  Q
    ||||||||||| ||||||| | ||||||||| ||||||  |||||||||||||||||||    
T  14015916 tttggcaagtgtaccaaatcctatcgaagtagtaaaaatatcgtttccacgaggactgt 14015974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 471 - 507
Target Start/End: Complemental strand, 32838202 - 32838166
Alignment:
Q  471 atcgaagtaataaaaaattcgtttccacgaggactgt 507  Q
    ||||||||||||||||  |||||||||||||||||||    
T  32838202 atcgaagtaataaaaatatcgtttccacgaggactgt 32838166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 440 - 669
Target Start/End: Complemental strand, 31528635 - 31528406
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 539  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31528635 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaatttgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 31528536  T
Q  540 aaaggatgtataaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagttttta-gaaaattag 638  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||| |    
T  31528535 aaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-g 31528437  T
Q  639 agagaagtatggttaagaccttcgaatcctc 669  Q
    ||||||||||||||||| |||||||||||||    
T  31528436 agagaagtatggttaagtccttcgaatcctc 31528406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 440 - 666
Target Start/End: Complemental strand, 13710315 - 13710091
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 539  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  13710315 tgatagatatttggcaagtgaaccaaattcaatcgaagtaataaaaa-ttcgtttttacgagaactgtatttaacttctacttagcaatttcattattaa 13710217  T
Q  540 aaaggatgtat-aaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattag 638  Q
    ||||||||||| |||||||||||  ||||  ||| ||||||||||| || |||||||||||  |||||||||||||||  ||| | |||||||||||| |    
T  13710216 aaaggatgtataaaatttatattgatgcctgaggaagttgagttgagtt-gtaacataaacggattaaaaacaataaaagatt-ggttttagaaaatttg 13710119  T
Q  639 agagaagtatggttaagaccttcgaatc 666  Q
    ||||||||||||||||||||||| ||||    
T  13710118 agagaagtatggttaagaccttcaaatc 13710091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 446 - 684
Target Start/End: Complemental strand, 40018218 - 40017981
Alignment:
Q  446 atatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaaaaagga 545  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||| ||| |||| || |||||||||| |||| |||||||  |||||||||||||    
T  40018218 atatttggcaagtgaaccaaattcaatcgaagtaataaaaaatttgttttcacaaggagtgcatttaacttcgacttggcaatttttttattaaaaagga 40018119  T
Q  546 tgtat-aaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataa-agaattagtttttagaaaattagagaga 643  Q
    ||||| |||||||||||  |||||||||||||||||||||||| |||||||||||  |||||||||||||| ||| |  | ||| |||||| | ||||||    
T  40018118 tgtataaaatttatattgatgccctaggcagttgagttgattt-gtaacataaacggattaaaaacaataagagact--ggtttaagaaaaattgagaga 40018022  T
Q  644 agtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  40018021 agtatggttaagaccttcgaatcctccgaaactctcctatg 40017981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 450 - 684
Target Start/End: Complemental strand, 31626784 - 31626551
Alignment:
Q  450 ttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaaaaaggatgta 549  Q
    |||| ||||||||||||||| |||||||||||||||| |||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||     
T  31626784 ttggtaagtgaaccaaattcaatcgaagtaataaaaa-ttcgtttcaatgaggactgtatt-aacttctacttagcaatttcattattaaaaaggatgtg 31626687  T
Q  550 taaa-tttatattagtgccctaggcagttgagttgatttagtaacat-aaactaattaaaaacaataaagaattagtttttagaaaattagagagaagta 647  Q
    |||| |||||||| ||||||||||||||||||||||||| ||||||| |||  ||||||||| ||||||| ||| | |||||||||||  |||||||| |    
T  31626686 taaaatttatattggtgccctaggcagttgagttgattttgtaacataaaaggaattaaaaataataaaggatt-ggttttagaaaatctgagagaagaa 31626588  T
Q  648 tggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||| | |||||||||||||||  |||||||||    
T  31626587 tggttaagtcattcgaatcctccgaagctctcctatg 31626551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 440 - 684
Target Start/End: Complemental strand, 16295143 - 16294900
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaat-tcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    ||||||| |||||||||||||||||||  | |||||||||||||| ||  ||   ||||||||||| ||  |||| ||||||| ||||||||| ||||      
T  16295143 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcaaatccacgaggaccgttgttaatttctactcagcaatttcgttatcg 16295045  T
Q  539 aaaaggatgtataaa-tttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaac-aataaagaattagtttttagaaaatt 636  Q
    ||| ||||||||||| ||||||||  |||||||||||||||||||||||| ||| |||||||  ||||||||| ||||||| ||||||||| ||||||||    
T  16295044 aaa-ggatgtataaaatttatattgatgccctaggcagttgagttgattttgtatcataaaccgattaaaaacaaataaag-attagttttcagaaaatt 16294947  T
Q  637 agagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
     |||||||||||||||||| ||||||||||||||||| ||||||||||    
T  16294946 -gagagaagtatggttaagtccttcgaatcctccgaagttctcctatg 16294900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 440 - 684
Target Start/End: Original strand, 23673345 - 23673588
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    ||||||| |||||||||||||||||||  | |||||||||||||| |||||||| ||||||||||| ||  |||| ||||||| | ||||||| |||| |    
T  23673345 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcaacaatttctttatca 23673443  T
Q  539 aaaaggatgtat-aaatttatattagtgccctaggcagttgagttg--atttagtaacataaactaattaaaaacaataaagaattagtttttagaaaat 635  Q
    |||||||||||| ||||| |   |  |||||||||||||||  |||  |||| |||| ||||||  ||||||||||||||| | || | |||||||||||    
T  23673444 aaaaggatgtattaaattcaaggt--tgccctaggcagttggattggcattt-gtaaaataaacggattaaaaacaataaa-agtttggttttagaaaat 23673539  T
Q  636 tagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  23673540 tagagagatgtatggttaagaccttcgaatcctccgaagttctcctatg 23673588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 440 - 684
Target Start/End: Complemental strand, 36327171 - 36326928
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    |||||||||||||||||||||||||||  | |||||||||||||| |||||||| ||||||||||| ||  ||||||||||||  |||||||| |||| |    
T  36327171 tgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactctgcaatttctttatca 36327073  T
Q  539 aaaaggatgta-taaatttatattagtgccctaggcagtt-gagttgatttagtaacataaactaattaaaaacaataaagaattagtttttagaaaatt 636  Q
    |||| |||||| |||||| | | |  ||||||||| |||| || | |  || |||| ||||||  ||||||||||||||| | || | ||||||||||||    
T  36327072 aaaaagatgtattaaattcaaagt--tgccctaggaagttagattggtatttgtaaaataaacggattaaaaacaataaa-agtttggttttagaaaatt 36326976  T
Q  637 agagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||| |||||||||||||||| |||||||||||| ||||| ||||    
T  36326975 agagagatgtatggttaagacctttgaatcctccgaagttctcatatg 36326928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 172 - 360
Target Start/End: Original strand, 34977444 - 34977630
Alignment:
Q  172 taaaagtgtgaaatgattcattaacttgagaaatgattacaagatattatatatatactaaaagctaaatgtactatctaagaaggattgtactatcctt 271  Q
    ||||| ||||||||||||||||||  ||| ||  |||||||||||| ||| ||||  ||| | ||||| ||| |||||| | ||||||| |||||| ||     
T  34977444 taaaaatgtgaaatgattcattaagatgaaaagggattacaagatagtatttata--ctataggctaattgtgctatctgaaaaggatt-tactattctc 34977540  T
Q  272 aagctaaagtacaatgtaaaa-ctaattacttgtactacaagatttcttactattatccttattatcatttgaactatcattatgcaata 360  Q
    ||||||||||||||||||||| ||| ||||||||| |||||| ||||||||||| ||| ||||||||||||||| |||||||||| ||||    
T  34977541 aagctaaagtacaatgtaaaaactagttacttgtagtacaagttttcttactatcatctttattatcatttgaattatcattatgtaata 34977630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 235 - 360
Target Start/End: Original strand, 19913665 - 19913790
Alignment:
Q  235 gctaaatgtactatctaagaaggattgtactatccttaagctaaagtacaatgtaaaactaattacttgtactacaagatttcttactattatccttatt 334  Q
    ||||| |||||||||| ||||||||||||||||||| || |||||||||||||||| ||||||||||||||||| ||||||||||| | | || ||||      
T  19913665 gctaattgtactatcttagaaggattgtactatcctcaacctaaagtacaatgtaatactaattacttgtactataagatttcttattttcatgcttagg 19913764  T
Q  335 atcatttgaactatcattatgcaata 360  Q
    ||||| ||||||||||||||| ||||    
T  19913765 atcatgtgaactatcattatgtaata 19913790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 19915273 - 19915375
Alignment:
Q  258 attgtactatccttaagctaaagtacaatgtaaaactaattacttgtactacaagatttcttactattatccttattatcatttgaactatcattatgca 357  Q
    ||||||||||||| |||||||| |||||||||| ||||||||||||||| || |||||||||| | | || ||||  ||||||||||||||||||||| |    
T  19915273 attgtactatcctcaagctaaactacaatgtaatactaattacttgtacgacgagatttcttattttcatgcttaggatcatttgaactatcattatgta 19915372  T
Q  358 ata 360  Q
    |||    
T  19915373 ata 19915375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 440 - 684
Target Start/End: Original strand, 32575685 - 32575930
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    ||||||||||||||||||||||||||   | || ||||||||||| |||||||| ||||||||||| ||  |||||||||||| | | ||||| |||| |    
T  32575685 tgatagatatttggcaagtgaaccaaca-ctattgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactcaacgatttcgttataa 32575783  T
Q  539 aaaaggatgtataaatttatattagtgccctaggcagttgagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaatta 637  Q
     ||| ||||||| || ||  |||  | |||||||||||||  ||| |||  |||  ||||| ||| ||||| ||||||| | || ||||| |||| ||||    
T  32575784 taaatgatgtattaaattcaattgttaccctaggcagttggattgtttttataaagtaaacgtaaataaaa-caataaa-agttggttttaagaatatta 32575881  T
Q  638 gaga--gaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||  ||||||||||||||||||||||||||||||||  |||||||||    
T  32575882 gagaaagaagtatggttaagaccttcgaatcctccgaagctctcctatg 32575930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 440 - 531
Target Start/End: Original strand, 24384925 - 24385018
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa---aaattcgtttccacgaggactgtatttaacttctacttagcaatttc 531  Q
    |||||||||||||||||||| ||||||  | ||||||||||||||   |||||||| | ||||| ||||||  |||| |||||||||||||||||    
T  24384925 tgatagatatttggcaagtgtaccaaa-actatcgaagtaataaaattaaattcgtattcacgatgactgttattaatttctacttagcaatttc 24385018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 440 - 507
Target Start/End: Complemental strand, 33311003 - 33310935
Alignment:
Q  440 tgatagatattt-ggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgt 507  Q
    |||||||||||| |||||||| ||||||| | ||||||||| ||||||  ||||| |||||||||||||    
T  33311003 tgatagatattttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgt 33310935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 549
Target Start/End: Complemental strand, 29436113 - 29436003
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    ||||||||| ||| |||||| | ||||  | ||||||||||||| ||| ||||| ||||||||||| ||  |||| ||||||||||||| ||| |||  |    
T  29436113 tgatagataattgacaagtgtatcaaaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaa 29436014  T
Q  539 aaaaggatgta 549  Q
     ||||||||||    
T  29436013 taaaggatgta 29436003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 506
Target Start/End: Original strand, 40258905 - 40258971
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactg 506  Q
    |||||||| ||||||||||| ||||||| | ||||||||| ||||||  ||||| |||| |||||||    
T  40258905 tgatagatttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 40258971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 194; Significance: 1e-105; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 440 - 684
Target Start/End: Original strand, 13017189 - 13017433
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 539  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13017189 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaagttcgtttccacgaggactatatttaacttctacttagcaatttcattattaa 13017288  T
Q  540 aaaggatgtataaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagttttt-agaaaattag 638  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |    
T  13017289 aaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttcagaaaatt-g 13017387  T
Q  639 agagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||||||| |||||||||||||| ||  |||||||||    
T  13017388 agagaagtatggttaagtccttcgaatcctccaaagctctcctatg 13017433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 440 - 684
Target Start/End: Complemental strand, 22221967 - 22221726
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 539  Q
    ||||||| |||||||||||| ||||||  | ||||||||| ||| ||||||||||||||||||||| |||||| |||||||| |||||||||||||||||    
T  22221967 tgatagaaatttggcaagtgtaccaaaagctatcgaagtagtaataaattcgtttccacgaggactatatttagcttctactaagcaatttcattattaa 22221868  T
Q  540 aaaggatgtataaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattaga 639  Q
    ||||||||||||||||  |||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||| ||    
T  22221867 aaaggatgtataaattattattggtgccctaggcagttgagttgatttagta--ataaactaattaaaaacaataaagaattggtttttagaaaatt-ga 22221771  T
Q  640 gagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||| ||||||||| |||||||||||||||||  |||||||||    
T  22221770 gagaagcatggttaagtccttcgaatcctccgaagctctcctatg 22221726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 440 - 684
Target Start/End: Complemental strand, 22247802 - 22247561
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 539  Q
    ||||||| |||||||||||| ||||||  | ||||||||| ||| ||||||||||||||||||||| |||||| |||||||| |||||||||||||||||    
T  22247802 tgatagaaatttggcaagtgtaccaaaagctatcgaagtagtaataaattcgtttccacgaggactatatttagcttctactaagcaatttcattattaa 22247703  T
Q  540 aaaggatgtataaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattaga 639  Q
    ||||||||||||||||  |||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||| ||    
T  22247702 aaaggatgtataaattattattggtgccctaggcagttgagttgatttagta--ataaactaattaaaaacaataaagaattggtttttagaaaatt-ga 22247606  T
Q  640 gagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||| ||||||||| |||||||||||||||||  |||||||||    
T  22247605 gagaagcatggttaagtccttcgaatcctccgaagctctcctatg 22247561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 440 - 684
Target Start/End: Complemental strand, 14790864 - 14790620
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    |||||||||||||||||||| ||||||  | ||||||||| ||| ||| ||||| ||||||||||| ||  |||| |||||||  |||||||| |||| |    
T  14790864 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 14790765  T
Q  539 aaaaggatgtataaatttatatt-agtgccctaggcagttgagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaatt 636  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||| ||| ||||| ||||||| | || ||||| |||| |||    
T  14790764 aaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaa-caataaa-agttggttttcagaatatt 14790668  T
Q  637 agagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  14790667 agagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 14790620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 438 - 684
Target Start/End: Complemental strand, 14795894 - 14795648
Alignment:
Q  438 actgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaatttcattat 536  Q
    |||||||||||||||||||||| ||||||  | ||||||||| ||| ||| |||||  | |||||||| ||  |||| |||||||  |||||||| ||||    
T  14795894 actgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtacctacgaggaccgttgttaatttctactcggcaatttctttat 14795795  T
Q  537 taaaaaggatgtataaatttatatt-agtgccctaggcagttgagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaa 634  Q
     |||||||||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||| ||| ||||| ||||||| | || ||||| |||| |    
T  14795794 caaaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaa-caataaa-agttggttttcagaata 14795698  T
Q  635 ttagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  14795697 ttagagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 14795648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 550 - 684
Target Start/End: Original strand, 30978321 - 30978455
Alignment:
Q  550 taaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagttttt-agaaaattagagagaagtat 648  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||||||||    
T  30978321 taaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtat 30978419  T
Q  649 ggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||| |||||||||||||| ||  |||||||||    
T  30978420 ggttaagtccttcgaatcctccaaagctctcctatg 30978455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 471 - 684
Target Start/End: Complemental strand, 15535270 - 15535058
Alignment:
Q  471 atcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaaaaaggatgtat-aaatttatattagtgccc 568  Q
    |||||||||||||| |||||||| ||||||||||| ||  |||||||||||| ||| ||||| |||| ||||||||||||| ||||| |   |  |||||    
T  15535270 atcgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactcagccatttctttataaaaaaggatgtattaaattcaaggt--tgccc 15535173  T
Q  569 taggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattagagagaagtatggttaagaccttcgaatcct 668  Q
    ||||||||||||||||||| |||| | |||   ||||||||||||||| | || | ||||| ||||||| || || ||||||||||||||||| ||||||    
T  15535172 taggcagttgagttgattttgtaaaacaaatagattaaaaacaataaa-agtttggttttacaaaattaaagtgatgtatggttaagaccttcaaatcct 15535074  T
Q  669 ccgaaattctcctatg 684  Q
    ||||| || |||||||    
T  15535073 ccgaagttttcctatg 15535058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 448 - 684
Target Start/End: Original strand, 19664674 - 19664909
Alignment:
Q  448 atttggcaagtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaaaaaggat 546  Q
    |||||||||||||||||||  | |||||||||||||| ||||| || ||||||||||| ||  || | ||||||| | ||||||| |||| |||||||||    
T  19664674 atttggcaagtgaaccaaaa-ctatcgaagtaataaataaatttgtatccacgaggaccgttgtttatttctactcaacaatttctttatcaaaaaggat 19664772  T
Q  547 gtat-aaatttatattagtgccctaggcagttgagttgat-ttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattagagagaa 644  Q
    |||| ||||| |   |  |||||||||||||||  ||| | || |||| ||||||  ||||||||||||||| | || | ||| |||||||||||||||     
T  19664773 gtattaaattcaaggt--tgccctaggcagttggattggtatttgtaaaataaacggattaaaaacaataaa-agtttggtttaagaaaattagagagat 19664869  T
Q  645 gtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  19664870 gtatggttaagaccttcgaatcctccgaagttctcctatg 19664909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 566 - 684
Target Start/End: Complemental strand, 16883795 - 16883677
Alignment:
Q  566 ccctaggcagttgagttgattta-gtaacataaactaattaaaaacaataaagaattagtttttagaaaattagagagaagtatggttaagaccttcgaa 664  Q
    |||||||||||||| |||||||  ||||||||||| ||||||||||||||||  ||| ||||| ||||||||||||||||||||||||||||| ||||||    
T  16883795 ccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtatggttaagacattcgaa 16883697  T
Q  665 tcctccgaaattctcctatg 684  Q
    |||| |||| ||||||||||    
T  16883696 tccttcgaagttctcctatg 16883677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 440 - 684
Target Start/End: Complemental strand, 1838720 - 1838475
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    ||||||| ||||||||||||||||||| |  |||||||||||||| |||||||| ||||| ||||| ||  |||| |||||||  |||||||| |||| |    
T  1838720 tgatagagatttggcaagtgaaccaaaatt-atcgaagtaataaataaattcgtatccacaaggaccgttgttaatttctactcggcaatttctttatca 1838622  T
Q  539 aaaaggatgtataaatttatatt--agtgccctaggcagtt-gagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaa 634  Q
    |||||||||||||||||||||||    |  ||||| ||||| || | | |||  |||  ||||| ||||  |||| |||||| | || ||||| |||| |    
T  1838621 aaaaggatgtataaatttatattgatttttcctagacagttggattggtttttataaagtaaacgtaat--aaaagaataaa-agttggttttaagaata 1838525  T
Q  635 ttagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1838524 ttagagagaagtatggttaagaccttcgaatcctccgaagttctcctatg 1838475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 564 - 684
Target Start/End: Original strand, 20527286 - 20527407
Alignment:
Q  564 tgccctaggcagttgagttgattta-gtaacataaac-taattaaaaacaataaagaattagtttttagaaaattagagagaagtatggttaagaccttc 661  Q
    |||||||||||||||| |||||||  ||||| ||||| ||| ||||||||||||| | || ||||| |||| ||||||||||||||||||||||||||||    
T  20527286 tgccctaggcagttgaattgatttttgtaacgtaaacataaataaaaacaataaa-agttggttttaagaatattagagagaagtatggttaagaccttc 20527384  T
Q  662 gaatcctccgaaattctcctatg 684  Q
    |||||||||||| ||||||||||    
T  20527385 gaatcctccgaagttctcctatg 20527407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 510 - 682
Target Start/End: Complemental strand, 15540744 - 15540574
Alignment:
Q  510 ttaacttctacttagcaatttcattattaaaaaggatgtat-aaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaa 608  Q
    |||||||||||| |||||||||  ||| ||||||||||||| ||||| |   |  | ||||||||||||||||||||||  ||| |||||   |||||||    
T  15540744 ttaacttctactcagcaatttctatatcaaaaaggatgtattaaattcaaggt--ttccctaggcagttgagttgattttctaaaataaagggattaaaa 15540647  T
Q  609 acaataaagaattagtttttagaaaattagagagaagtatggttaagaccttcgaatcctccgaaattctccta 682  Q
    ||||||||   |||||||| ||||||||| |||||  |||||||||||||||||||||||||||| ||||||||    
T  15540646 acaataaaagtttagtttt-agaaaattaaagagatttatggttaagaccttcgaatcctccgaagttctccta 15540574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 623 - 684
Target Start/End: Complemental strand, 27649165 - 27649104
Alignment:
Q  623 gtttttagaaaattagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  27649165 gttttaagaaaattagagcgaagtatggttaagaccttcgaatcctccgaagttctcctatg 27649104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 440 - 684
Target Start/End: Complemental strand, 32427544 - 32427303
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    |||||||||||||| ||||||||||||  | |||||||||||||| ||||| || || |||||||| ||  |||| ||||||| ||||||||| |||| |    
T  32427544 tgatagatatttggtaagtgaaccaaaa-ctatcgaagtaataaataaatttgtatctacgaggaccgttgttaa-ttctactcagcaatttctttatca 32427447  T
Q  539 aaaaggatgtat-aaatttatattagtgccctaggcagttgagttgat-ttagtaacataaactaattaaaaacaataaagaattagtttttagaaaatt 636  Q
    |||| ||||||| ||||| |   |  |||||||| ||||||  ||| | || |||| |||||| ||||||||||||| || | || | ||||||||||||    
T  32427446 aaaaagatgtattaaattcaaggt--tgccctag-cagttggattggtatttgtaaaataaacgaattaaaaacaatgaa-agtttggttttagaaaatt 32427351  T
Q  637 agagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||| || || |||||||||| |||||||| ||| ||||||||||    
T  32427350 agagagatgtttgattaagacctttgaatcctctgaagttctcctatg 32427303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 606 - 684
Target Start/End: Original strand, 32704421 - 32704498
Alignment:
Q  606 aaaacaataaagaattagtttttagaaaattagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||| | || ||||| |||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  32704421 aaaacaataaa-agttggttttcagaatattagagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 32704498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 566 - 641
Target Start/End: Original strand, 11183962 - 11184037
Alignment:
Q  566 ccctaggcagttgagttga-tttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattagaga 641  Q
    ||||||||||||||||||| ||| |||||||||||  | ||||||||||||| | || |||||||||||||||||||    
T  11183962 ccctaggcagttgagttgatttttgtaacataaacgtaataaaaacaataaa-agttggtttttagaaaattagaga 11184037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 630 - 684
Target Start/End: Original strand, 12980682 - 12980736
Alignment:
Q  630 gaaaattagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||| ||||||  ||||| ||||||||||||||||||||| ||||||||||    
T  12980682 gaaaattaaagagaaaaatggtcaagaccttcgaatcctccgaagttctcctatg 12980736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 632 - 684
Target Start/End: Original strand, 12983571 - 12983623
Alignment:
Q  632 aaattagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||| ||||||  ||||| ||||||||||||||||||||| ||||||||||    
T  12983571 aaattaaagagaaaaatggtcaagaccttcgaatcctccgaagttctcctatg 12983623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 439 - 506
Target Start/End: Complemental strand, 19476362 - 19476295
Alignment:
Q  439 ctgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactg 506  Q
    ||||||||| ||||||||||| ||||||| | ||||||||| ||||||  ||||| |||| |||||||    
T  19476362 ctgatagatttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 19476295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 15483602 - 15483644
Alignment:
Q  271 taagctaaagtacaatgtaaaactaattacttgtactacaaga 313  Q
    ||||||||||||||||  |||||||||| ||||||||||||||    
T  15483602 taagctaaagtacaatacaaaactaattgcttgtactacaaga 15483644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 440 - 504
Target Start/End: Complemental strand, 2379586 - 2379522
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggac 504  Q
    |||||||  ||||||||||| ||||||| | ||||||||| ||||||  ||||| ||||||||||    
T  2379586 tgatagaattttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggac 2379522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 440 - 507
Target Start/End: Original strand, 7559850 - 7559920
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa---aaattcgtttccacgaggactgt 507  Q
    ||||| ||||||| |||||| || ||||| |||||||||||||||   || ||||||||||||| ||||||    
T  7559850 tgataaatatttgacaagtgtactaaatttgatcgaagtaataaagataagttcgtttccacgaagactgt 7559920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 640 - 672
Target Start/End: Original strand, 7769588 - 7769620
Alignment:
Q  640 gagaagtatggttaagaccttcgaatcctccga 672  Q
    ||||| |||||||||||||||||||||||||||    
T  7769588 gagaaatatggttaagaccttcgaatcctccga 7769620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 193; Significance: 1e-104; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 440 - 684
Target Start/End: Original strand, 22626312 - 22626554
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 539  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22626312 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaagttcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 22626411  T
Q  540 aaaggatgtataaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattaga 639  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |  ||||||||||| ||    
T  22626412 aaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaatt-ggatttagaaaatt-ga 22626509  T
Q  640 gagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||||||||||| |||||||||||||| ||  |||||||||    
T  22626510 gagaagtatggttaagtccttcgaatcctccaaagctctcctatg 22626554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 440 - 684
Target Start/End: Original strand, 11138570 - 11138812
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 539  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11138570 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaagttcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 11138669  T
Q  540 aaaggatgtataaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattaga 639  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |  || |||||||| ||    
T  11138670 aaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaatatagaatt-ggattcagaaaatt-ga 11138767  T
Q  640 gagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||||||||||| |||||||||||||| ||  |||||||||    
T  11138768 gagaagtatggttaagtccttcgaatcctccaaagctctcctatg 11138812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 440 - 672
Target Start/End: Original strand, 39563510 - 39563742
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 539  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  39563510 tgatagatatttggcaagtgaaccaaattcaatcaaagtaataaaaaattcgtttccacgaggactgta-ttaacttctacttagcaatttcattataaa 39563608  T
Q  540 aaaggatgtat-aaatttatattagtgccctaggcagttgagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaatta 637  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||| | ||||  ||| | |||||||||||      
T  39563609 aaaggatgtgtaaaatttatattagtgccctaggcagttgagttgattttgtaacataaacaaaattaaaaatagtaaaagatt-ggttttagaaaatct 39563707  T
Q  638 gagagaagtatggttaagaccttcgaatcctccga 672  Q
    |||||||| ||||||||| ||||||||||||||||    
T  39563708 gagagaagaatggttaagtccttcgaatcctccga 39563742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 440 - 549
Target Start/End: Original strand, 20536333 - 20536445
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaat---tcgtttccacgaggactgtatttaacttctacttagcaatttcattat 536  Q
    |||||||||||||| ||||| ||||||  | || |||||| |||| ||    |||| ||||||||||||||||||||||||||||||| |||||||||||    
T  20536333 tgatagatatttggaaagtgtaccaaaaactattgaagtagtaaataaaagatcgtatccacgaggactgtatttaacttctacttagaaatttcattat 20536432  T
Q  537 taaaaaggatgta 549  Q
    |||||||||||||    
T  20536433 taaaaaggatgta 20536445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 440 - 684
Target Start/End: Complemental strand, 13979730 - 13979488
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    ||||||| |||||||||||||||||||  | |||||||||||||| ||| |||  |||||||||||||   |||| ||||||| ||||||||| ||||      
T  13979730 tgatagagatttggcaagtgaaccaaaa-ctatcgaagtaataaataaaatcgaatccacgaggactgctgttaatttctactcagcaatttctttatcg 13979632  T
Q  539 aaaaggatgtataaatttatattagtgccctaggcagttgagttgattt-agtaacataaac-taattaaaaacaataaagaattagtttttagaaaatt 636  Q
    ||| |||||||| || | || |   ||||| |||||||||  ||| ||| | |||  ||||| ||| ||||| ||||||| | || ||||| |||| |||    
T  13979631 aaa-ggatgtattaaat-atctggttgcccaaggcagttggattggttttaataaagtaaacgtaaataaaa-caataaa-agttggttttaagaatatt 13979536  T
Q  637 agagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||||||||||||||||||| ||||||||||||  |||||||||    
T  13979535 agagagaagtatggttaagacctttgaatcctccgaagctctcctatg 13979488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 625 - 684
Target Start/End: Complemental strand, 46731555 - 46731496
Alignment:
Q  625 ttttagaaaattagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||    
T  46731555 ttttagaaaattagagagatgtaaggttaagaccttcgaatcctccgaagttctcatatg 46731496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 440 - 550
Target Start/End: Complemental strand, 46731699 - 46731589
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    ||||||| ||||||||||||||| |||  | ||||||||||| || ||||| || ||||||||||| ||  |||||||||||| ||||||||| |||| |    
T  46731699 tgatagagatttggcaagtgaacaaaaa-ctatcgaagtaatgaataaatttgtatccacgaggaccgttgttaacttctactcagcaatttctttatca 46731601  T
Q  539 aaaaggatgtat 550  Q
    ||||||||||||    
T  46731600 aaaaggatgtat 46731589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 440 - 558
Target Start/End: Complemental strand, 19869343 - 19869223
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    |||||||||||||||||||| || ||| || ||| ||||| ||| ||| ||||| ||||||||||| ||  |||| ||||||||||||| ||| |||  |    
T  19869343 tgatagatatttggcaagtgtactaaaatctatcaaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaa 19869244  T
Q  539 aaaaggatgta-taaatttat 558  Q
     |||||||||| |||||||||    
T  19869243 taaaggatgtagtaaatttat 19869223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 497 - 550
Target Start/End: Complemental strand, 35366562 - 35366510
Alignment:
Q  497 acgaggactgtatttaacttctacttagcaatttcattattaaaaaggatgtat 550  Q
    |||||||| ||  |||||||||||||||||||||||||| ||||||||||||||    
T  35366562 acgaggaccgttgttaacttctacttagcaatttcatta-taaaaaggatgtat 35366510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 562 - 641
Target Start/End: Complemental strand, 50096904 - 50096825
Alignment:
Q  562 agtgccctaggcagttgagttga-tttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattagaga 641  Q
    ||||||||| ||||||||||||| ||| |||||||||||  | |||||||| |||| | || |||||||||||||||||||    
T  50096904 agtgccctaagcagttgagttgatttttgtaacataaacgtaataaaaacagtaaa-agttggtttttagaaaattagaga 50096825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 440 - 507
Target Start/End: Original strand, 50461303 - 50461371
Alignment:
Q  440 tgatagatattt-ggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgt 507  Q
    |||||||||||| |||||||| ||||||| | ||||||||| ||||||  ||||| |||||||||||||    
T  50461303 tgatagatattttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgt 50461371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 507
Target Start/End: Complemental strand, 3306213 - 3306144
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa--aaattcgtttccacgaggactgt 507  Q
    |||||||||||||||||||| |||||   | ||||||||||||||  || ||||| ||||||||||||||    
T  3306213 tgatagatatttggcaagtgtaccaataactatcgaagtaataaattaagttcgtatccacgaggactgt 3306144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 506
Target Start/End: Original strand, 48063791 - 48063857
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactg 506  Q
    |||||||| ||||||||||| ||||||| | ||||||||| ||||||  ||||| |||| |||||||    
T  48063791 tgatagatttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 48063857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 438 - 486
Target Start/End: Original strand, 25442611 - 25442659
Alignment:
Q  438 actgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaa 486  Q
    |||||||||| ||||||||||| ||||||| | ||||||||| ||||||    
T  25442611 actgatagatttttggcaagtgtaccaaatactatcgaagtagtaaaaa 25442659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 439 - 507
Target Start/End: Complemental strand, 28331132 - 28331064
Alignment:
Q  439 ctgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgt 507  Q
    |||||||||| |||||||||| |||||   | ||||||||| ||||||  ||||| |||||||||||||    
T  28331132 ctgatagataattggcaagtgtaccaataactatcgaagtagtaaaaatatcgttcccacgaggactgt 28331064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 178; Significance: 1e-95; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 440 - 684
Target Start/End: Complemental strand, 10109 - 9865
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaa-aattcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  10109 tgatagaaatttggcaagtgaatcaaattcgatcgaagtaataaaagaattcgtttcctcagggactgtatttaacttctacttagcaatttcattatta 10010  T
Q  539 aaaaggatgtataaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattag 638  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||| |    
T  10009 aaaaggatgtataaatttatattggtcccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaataattggtttttagaaaatt-g 9911  T
Q  639 agagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||||||| |||||||||||||||||  |||||||||    
T  9910 agagaagtatggttaagtccttcgaatcctccgaagctctcctatg 9865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 177; Significance: 5e-95; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 440 - 684
Target Start/End: Original strand, 23759609 - 23759852
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 539  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||| ||||    
T  23759609 tgatagatatttggcaagtgaaccaaattcaatcgaagtaataaaaagttcgtttctacgaggactgtatttaacttctacttagcaaattcatt-ttaa 23759707  T
Q  540 aaaggatgtataaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattaga 639  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||  ||| | ||    
T  23759708 aaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatcga 23759807  T
Q  640 gagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||||||||||| |||||||||||||| ||  |||||||||    
T  23759808 gagaagtatggttaagtccttcgaatcctccaaagctctcctatg 23759852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 446 - 681
Target Start/End: Complemental strand, 11279730 - 11279496
Alignment:
Q  446 atatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaaaaagga 545  Q
    |||||||||||||||||||||||| |||||||||||||||| || |||||||| |||||| ||||||| |||||||||||||||||||||||||||||||    
T  11279730 atatttggcaagtgaaccaaattcaatcgaagtaataaaaattt-gtttccacaaggactatatttaatttctacttagcaatttcattattaaaaagga 11279632  T
Q  546 tgtat-aaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaac-aataaagaattagtttttagaaaattagagaga 643  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||| ||| |||||||||| ||| ||||||    
T  11279631 tgtataaaatttatattggtgccctaggcagttgagttgattttgtaacataaactgattaaaaacgaataaag-attggtttttagaagatt-gagaga 11279534  T
Q  644 agtatggttaagaccttcgaatcctccgaaattctcct 681  Q
    |||||||||||| |||||||||| | |||| |||||||    
T  11279533 agtatggttaagtccttcgaatctttcgaagttctcct 11279496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 440 - 684
Target Start/End: Original strand, 36222309 - 36222552
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 539  Q
    |||| |||||||||||| |||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||| |||||| ||||||||||||||||||    
T  36222309 tgatggatatttggcaaatgaaccaaattcaattgaagtaataaaa-attcgttaccacgaggattgtatttaatttctacgtagcaatttcattattaa 36222407  T
Q  540 aaaggatgtat-aaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattag 638  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||  ||||||||||| |||||||||||  ||  ||| |||||||||| ||| |    
T  36222408 aaaggatgtataaaatttatattggtgccctaggcagttgagttgattttctaacataaactgattaaaaacaaagaaagattggtttttagaagatt-g 36222506  T
Q  639 agagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  36222507 agagaagtatggttaagtccttcgaatcctccgaagttctcctatg 36222552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 438 - 684
Target Start/End: Complemental strand, 295108 - 294866
Alignment:
Q  438 actgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatt 537  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  295108 actgatggatatttggcaagtgaaccaaattcaatcgaagtaataaaaaatttgtgtccacgaggactgtatttaacttctacttagcaatttcattatt 295009  T
Q  538 aaaaaggatgt-ataaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagtttttagaaaatt 636  Q
    ||||||||||| |||||||||||||  ||||| |||||||  ||||| ||| ||||||||| ||  |||||| |||  ||| ||| | ||||||||||||    
T  295008 aaaaaggatgtaataaatttatattgatgcccgaggcagt--agttg-ttttgtaacataagctggttaaaagcaaataaggatt-ggttttagaaaatt 294913  T
Q  637 agagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
     |||||||||||||||||| | ||||||||||||||| ||||||||||    
T  294912 -gagagaagtatggttaagtctttcgaatcctccgaagttctcctatg 294866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 440 - 684
Target Start/End: Complemental strand, 33313239 - 33312996
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 539  Q
    |||||||||||||  ||||||| ||||||| |||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  33313239 tgatagatatttgagaagtgaaacaaattcaatcgaagtaataaaaa-ttcgtttctacgaggactgtatt-aacttctacttagcaatttcattattaa 33313142  T
Q  540 aaaggatgtataaa-tttatattagtgccctaggcagttgagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaatta 637  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||||||| |||||||||||  ||||||||| ||||||| ||| | |||||||||||      
T  33313141 aaaggatgtgtaaaatttatattggtgccctaggcagttgagttgattttgtaacataaacggaattaaaaataataaaggatt-ggttttagaaaatct 33313043  T
Q  638 gagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||  ||||||||| ||||||||||||| |||  |||||||||    
T  33313042 gagagaaaaatggttaagtccttcgaatcctctgaagctctcctatg 33312996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 448 - 684
Target Start/End: Original strand, 46846320 - 46846556
Alignment:
Q  448 atttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaaaaaggatg 547  Q
    |||||||||||||| || |||| ||||||||||||||||  | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  46846320 atttggcaagtgaatcagattcaatcgaagtaataaaaatat-gtttccacgaggactgtatttaatttctacttagcaatttcattattaaaaaggatg 46846418  T
Q  548 tat-aaatttatattagtgccctaggcagttgagttgatttagtaacataaact-aattaaaaacaataaagaattagtttttagaaaattagagagaag 645  Q
    ||| ||||||||||| |||||||||||||||||||||| ||  ||  ||||||| | | ||||||||||||  ||| |||||||||||||| ||||||||    
T  46846419 tataaaatttatattggtgccctaggcagttgagttgaattcttattataaactgactaaaaaacaataaaagattggtttttagaaaatt-gagagaag 46846517  T
Q  646 tatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||||| ||||||||||||||||| |||| |||||    
T  46846518 tatggttaagtccttcgaatcctccgaagttcttctatg 46846556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 440 - 685
Target Start/End: Original strand, 3861907 - 3862151
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 539  Q
    |||||||||||||||||||| || | | || |||||||||||||| |||| || |||||||||| |||  |||||||||||||||||||||||||||| |    
T  3861907 tgatagatatttggcaagtgtactagagtcaatcgaagtaataaataatttgtatccacgaggattgttattaacttctacttagcaatttcattatt-a 3862005  T
Q  540 aaaggatgtataaatttatattagtgccctaggcagttgagttga--tttagtaacataaactaattaaaaacaataaagaattagtttttagaaaatta 637  Q
    ||||||||||| || ||  || | |||||||||||||| | ||||  ||| |||||||||||| |||||||||||||||  ||| | ||||| |||||||    
T  3862006 aaaggatgtattaaattcaatga-tgccctaggcagttcaattgattttttgtaacataaactgattaaaaacaataaaagatt-ggttttataaaatta 3862103  T
Q  638 gagagaagtatggttaagaccttcgaatcctccgaaattctcctatgc 685  Q
    |||||||||||| |||||||||||||||||| |||| |||||||||||    
T  3862104 gagagaagtatgattaagaccttcgaatccttcgaagttctcctatgc 3862151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 440 - 684
Target Start/End: Complemental strand, 6967393 - 6967149
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    |||||||||||||||||||| ||||||  | ||||||||| ||| ||| ||||| ||||||||||| ||  |||| |||||||  |||||||| |||| |    
T  6967393 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 6967294  T
Q  539 aaaaggatgtataaatttatatt-agtgccctaggcagttgagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaatt 636  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||| ||| ||||| ||||||| | || ||||| |||| |||    
T  6967293 aaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaa-caataaa-agttggttttcagaatatt 6967197  T
Q  637 agagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  6967196 agagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 6967149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 440 - 684
Target Start/End: Original strand, 17866353 - 17866597
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    |||||||||||||||||||| ||||||  | ||||||||| ||| ||| ||||| ||||||||||| ||  |||| |||||||  |||||||| |||| |    
T  17866353 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 17866452  T
Q  539 aaaaggatgtataaatttatatt-agtgccctaggcagttgagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaatt 636  Q
    ||||||||||||||||||||||| | ||||||||||||||||| || ||| ||||||||||| ||| ||||| ||||||| | || ||||| |||| |||    
T  17866453 aaaaggatgtataaatttatattgattgccctaggcagttgagctgtttt-gtaacataaacgtaaataaaa-caataaa-agttggttttcagaatatt 17866549  T
Q  637 agagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  17866550 agagagaagtatggtttagaccttcgaatcctctgaagttctcctatg 17866597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 440 - 684
Target Start/End: Complemental strand, 24783654 - 24783410
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttagcaatttcatt-att 537  Q
    ||||||| ||||| |||||||||||||  | |||||||||||||| ||||| || ||||||||||| ||  |||| |||||||  |||||||| || ||     
T  24783654 tgatagagatttgacaagtgaaccaaaa-ctatcgaagtaataaataaatttgtatccacgaggaccgttgttaatttctactcggcaatttcttttatc 24783556  T
Q  538 aaaaaggatgtataaatttatatt-agtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagtttttagaaaatt 636  Q
    |||||||||||||||||||||||| | || || |||||||||||||| ||| |||||||||||| |   ||||||||||| | || ||||| |||| |||    
T  24783555 aaaaaggatgtataaatttatattgattgtccaaggcagttgagttgtttt-gtaacataaacttaaataaaacaataaa-agttggttttaagaatatt 24783458  T
Q  637 agagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||||||||||||||||||| |||||||||||| ||||| ||||    
T  24783457 agagagaagtatggttaagacctttgaatcctccgaagttctcatatg 24783410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 563 - 684
Target Start/End: Original strand, 23313383 - 23313504
Alignment:
Q  563 gtgccctaggcagttgagttgattta-gtaacataaactaattaaaaacaataaa-gaattagtttttagaaaattagagagaagtatggttaagacctt 660  Q
    |||||||||| |||||| |||||||  ||||||||||| |||||||||||||||| ||||  | ||||||||||||||||||||||||||||||||||||    
T  23313383 gtgccctaggtagttgaattgatttttgtaacataaacgaattaaaaacaataaaagaat--ggttttagaaaattagagagaagtatggttaagacctt 23313480  T
Q  661 cgaatcctccgaaattctcctatg 684  Q
     |||||||||||| ||||||||||    
T  23313481 tgaatcctccgaagttctcctatg 23313504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 547 - 684
Target Start/End: Original strand, 17863202 - 17863338
Alignment:
Q  547 gtataaatttatatt-agtgccctaggcagttgagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaattagagagaa 644  Q
    ||||||||||||||| | ||||||||||||||||| || ||| ||||||||||| ||| ||||| ||||||| | || ||||| |||| |||||||||||    
T  17863202 gtataaatttatattgattgccctaggcagttgagctgtttt-gtaacataaacgtaaataaaa-caataaa-agttggttttcagaatattagagagaa 17863298  T
Q  645 gtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  17863299 gtatggttaagaccttcgaatcctctgaagttctcctatg 17863338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 567 - 684
Target Start/End: Complemental strand, 23108106 - 23107989
Alignment:
Q  567 cctaggcagttgagttgat-ttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattagagagaagtatggttaagaccttcgaat 665  Q
    ||||| ||||||||||||| || ||||||||||| ||||||||||||||||  ||| ||||| |||||||||||||||| | ||||||||||||||||||    
T  23108106 cctagacagttgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaaatgtggttaagaccttcgaat 23108008  T
Q  666 cctccgaaattctcctatg 684  Q
    | ||||||  |||||||||    
T  23108007 catccgaagctctcctatg 23107989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 36843131 - 36843181
Alignment:
Q  634 attagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36843131 attagagagaagtatggttaagaccttcgaatcctccgaagttctcctatg 36843181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 623 - 684
Target Start/End: Complemental strand, 9765864 - 9765803
Alignment:
Q  623 gtttttagaaaattagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  9765864 gttttaagaatattagagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 9765803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 440 - 555
Target Start/End: Original strand, 17857880 - 17857996
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    |||||||||||||||||||| ||||||  | |||||| || ||| ||| ||||| ||||||||||| ||  |||| |||||||  |||||||| |||| |    
T  17857880 tgatagatatttggcaagtgtaccaaaagctatcgaaatagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 17857979  T
Q  539 aaaaggatgtataaatt 555  Q
    |||||||||||||||||    
T  17857980 aaaaggatgtataaatt 17857996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 440 - 507
Target Start/End: Complemental strand, 6603800 - 6603732
Alignment:
Q  440 tgatagatattt-ggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgt 507  Q
    |||||||||||| |||||||| ||||||| | ||||||||| ||||||  ||||| |||||||||||||    
T  6603800 tgatagatattttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgt 6603732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 507
Target Start/End: Complemental strand, 8277339 - 8277271
Alignment:
Q  439 ctgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgt 507  Q
    ||||||||  ||||||||||| ||||||| | ||||||||| ||||||  ||||| |||||||||||||    
T  8277339 ctgatagaattttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttaccacgaggactgt 8277271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 558
Target Start/End: Original strand, 3540924 - 3541042
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    ||||| |||||||||||||| ||||||  | ||| ||||| ||| ||| ||||| ||||||||||| ||  | |||||||||||||||| ||| |||  |    
T  3540924 tgataaatatttggcaagtgtaccaaaa-ctatcaaagtagtaataaagttcgtatccacgaggaccgttgtgaacttctacttagcaagttcgttaaaa 3541022  T
Q  539 aaaaggatgtataaatttat 558  Q
     ||||||||||| |||||||    
T  3541023 taaaggatgtattaatttat 3541042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 507
Target Start/End: Complemental strand, 16166090 - 16166023
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgt 507  Q
    |||||||| ||||||||||| ||||||| | ||||||||| ||||||  ||||| |||| ||||||||    
T  16166090 tgatagatttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactgt 16166023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 440 - 506
Target Start/End: Original strand, 37165917 - 37165983
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactg 506  Q
    |||||||| ||||||||||| ||||||| | ||||||||| ||||||  |||||||||  |||||||    
T  37165917 tgatagatttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgtttccataaggactg 37165983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 440 - 527
Target Start/End: Complemental strand, 38431757 - 38431669
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataa-aaaattcgtttccacgaggactgtatttaacttctacttagcaa 527  Q
    |||||||||||||| ||||| ||||||  | ||||||||| ||| ||| ||||| |||| |||||| ||  |||| |||||||||||||    
T  38431757 tgatagatatttggaaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccatgaggaccgttgttaatttctacttagcaa 38431669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 162; Significance: 4e-86; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 440 - 632
Target Start/End: Complemental strand, 12172218 - 12172025
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaat-tcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12172218 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaagatcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 12172119  T
Q  539 aaaaggatgtataaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagtttttagaa 632  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| |||||    
T  12172118 aaaaggatgtataaatttatattggtgccctaggcagttgagttgatttagtaacataaactgattaaaaacaataaagatttggtttctagaa 12172025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 439 - 684
Target Start/End: Complemental strand, 2542129 - 2541886
Alignment:
Q  439 ctgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    ||||||||||||||||||||| |||||| || |||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  2542129 ctgatagatatttggcaagtgtaccaaagtcaatcgaagtaataaataattcgtatccacgaggactgtatttaacttctactgagcaatttcattatta 2542030  T
Q  539 aaaaggatgtataaatttatattagtgccctaggcagttgagttgatt-tagtaacataaactaattaaaaacaataaagaattagtttttagaaaatta 637  Q
    |||||||||||| || ||  | | |||||||||||||||||||| ||| | |||||||||||  |||||||||||||||  ||  |||||| ||||||||    
T  2542029 aaaaggatgtattaaatt-caatggtgccctaggcagttgagtttattcttgtaacataaacggattaaaaacaataaaatataggttttttgaaaatta 2541931  T
Q  638 gagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
     ||||  ||||||||||||||||||||||||| ||| ||||| ||||    
T  2541930 aagag--gtatggttaagaccttcgaatcctctgaagttctcttatg 2541886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 174 - 352
Target Start/End: Original strand, 19799000 - 19799176
Alignment:
Q  174 aaagtgtgaaa-tgattcattaacttgagaaatgattacaagatattatatatatactaaaagctaaatgtactatctaagaaggattgtactatcctta 272  Q
    ||||||||||| | ||||||||||| || ||| |||||||||||| ||||  ||||||| | ||||| |||||||||| |  ||||||||| |||||| |    
T  19799000 aaagtgtgaaaattattcattaact-gaaaaaggattacaagatagtata--tatactagatgctaattgtactatcttaagaggattgtattatcctca 19799096  T
Q  273 agctaaagtacaatgtaaaactaattacttgtactacaagatttcttactattatccttattatcatttgaactatcatt 352  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  19799097 agctaaagtacaatgtaaaactagttacttgtactacaagatttctcactattatccttattataatttgaactatcatt 19799176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 440 - 684
Target Start/End: Original strand, 647203 - 647447
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    ||||| |||||||||||||| ||||||  | ||||||||| ||| ||| || || ||||||||||| ||  |||| |||||||  |||||||| |||| |    
T  647203 tgataaatatttggcaagtgtaccaaaagctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 647302  T
Q  539 aaaaggatgtataaatttatatt-agtgccctaggcagttgagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaatt 636  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||| ||| ||||||||||| ||| ||||| ||||||| | || ||||| |||| |||    
T  647303 aaaaggatgtataaatttatattgattgccctaggcatttgagttgtttt-gtaacataaacgtaaataaaa-caataaa-agttggttttcagaatatt 647399  T
Q  637 agagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||||||||||||||| |||||||||||| ||| ||||||||||    
T  647400 agagagaagtatggttaagatcttcgaatcctctgaagttctcctatg 647447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 161 - 360
Target Start/End: Original strand, 8124815 - 8125013
Alignment:
Q  161 taagaatgggataaaagtgtgaaatgattcattaacttgagaaatgattacaagatattatatatatactaaaagctaaatgtactatctaagaaggatt 260  Q
    |||||||| |||||||||||||||||||||||||||  || ||| ||||||||| || ||||  ||||||| | ||||| ||||||| || |  ||||||    
T  8124815 taagaatgtgataaaagtgtgaaatgattcattaacc-gaaaaaggattacaaggtagtata--tatactagatgctaattgtactaccttaagaggatt 8124911  T
Q  261 gtactatccttaagctaaagtacaatgtaaaactaattacttgtactacaagatttcttactattatcc--ttattatcatttgaactatcattatgcaa 358  Q
    |||||||||| |||||||||||||||||||| ||| |||||||||||||||| |||||| || ||||||   ||||||||||||||||||||||||| ||    
T  8124912 gtactatcctcaagctaaagtacaatgtaaatctagttacttgtactacaagttttcttgctgttatccatatattatcatttgaactatcattatgtaa 8125011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 440 - 684
Target Start/End: Original strand, 650475 - 650719
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    ||||| |||||||||||||| ||||||  | ||||||||| ||| ||| || || ||||||||||| ||  |||| |||||||  ||||||||  ||| |    
T  650475 tgataaatatttggcaagtgtaccaaaagctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctactcggcaatttctatatca 650574  T
Q  539 aaaaggatgtataaatttatatt-agtgccctaggcagttgagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaatt 636  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||| ||| ||||||||||| ||| ||||| ||||||| | || ||||| | || |||    
T  650575 aaaaggatgtataaatttatattgattgccctaggcatttgagttgtttt-gtaacataaacgtaaataaaa-caataaa-agttggttttcataatatt 650671  T
Q  637 agagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  650672 agagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 650719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 235 - 352
Target Start/End: Original strand, 19807113 - 19807230
Alignment:
Q  235 gctaaatgtactatctaagaaggattgtactatccttaagctaaagtacaatgtaaaactaattacttgtactacaagatttcttactattatccttatt 334  Q
    ||||| |||||||||| |  |||||||||||||||| |||||||||||||||||||||||| |||||||| |||||| |||||| |||||||||||||||    
T  19807113 gctaattgtactatcttaagaggattgtactatcctcaagctaaagtacaatgtaaaactagttacttgtgctacaaaatttctcactattatccttatt 19807212  T
Q  335 atcatttgaactatcatt 352  Q
    ||||||||||||||||||    
T  19807213 atcatttgaactatcatt 19807230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 448 - 684
Target Start/End: Original strand, 26062698 - 26062937
Alignment:
Q  448 atttggcaagtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggact--gtatttaacttctacttagcaatttcattattaaaaagg 544  Q
    |||||||||||||||||||  | |||||| ||||||| |||||||| |||||||||||   ||  |||||||||||| | ||||||| |||| |||||||    
T  26062698 atttggcaagtgaaccaaaa-ctatcgaaataataaataaattcgtatccacgaggaccccgttgttaacttctactcaacaatttctttatcaaaaagg 26062796  T
Q  545 atgtat-aaatttatattagtgccctaggcagttgagttgat-ttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattagagag 642  Q
    |||||| ||||| |   |  ||||||||| |||||  ||| | || |||| ||||||  ||||||||||||||| | || | ||||||||||||||||||    
T  26062797 atgtattaaattcaaggt--tgccctaggtagttggattggtatttgtaaaataaacggattaaaaacaataaa-agtttggttttagaaaattagagag 26062893  T
Q  643 aa--gtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |   |||||||||||||||| |||||||||||| ||||||||||    
T  26062894 agatgtatggttaagacctttgaatcctccgaagttctcctatg 26062937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 174 - 360
Target Start/End: Complemental strand, 17127426 - 17127241
Alignment:
Q  174 aaagtgtgaa-atgattcattaacttgagaaatgattacaagatattatatatatactaaaagctaaatgtactatct--aagaaggattgtactatcct 270  Q
    |||||||||| ||||||||||||||  | || || ||||| |||| |||||| |  ||| | | ||||||||||||||  |||| | |||||||||||||    
T  17127426 aaagtgtgaatatgattcattaactgaaaaagtggttacaggatagtatataaa--ctatatgataaatgtactatctctaaga-gaattgtactatcct 17127330  T
Q  271 taagctaaagtacaatgtaaaactaattacttgtactacaagatttcttactattatccttattatcatttgaactatcattatgcaata 360  Q
    ||||||| |||| |||||||| |||||||||||||||||||| ||||| | ||| |||| ||||||  |||||||| | ||| |||||||    
T  17127329 taagctagagtaaaatgtaaa-ctaattacttgtactacaagttttctcattatcatccctattatgctttgaactgttattctgcaata 17127241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 174 - 345
Target Start/End: Complemental strand, 17132303 - 17132133
Alignment:
Q  174 aaagtgtgaa-atgattcattaacttgagaaatgattacaagatattatatatatactaaaagctaaatgtactatct--aagaaggattgtactatcct 270  Q
    |||||||||| ||||||||||||||  | || || ||||| |||| |||||| |  ||| | | ||||||||||||||  |||| | |||||||||||||    
T  17132303 aaagtgtgaatatgattcattaactgaaaaagtggttacaggatagtatataaa--ctatatgataaatgtactatctctaaga-gaattgtactatcct 17132207  T
Q  271 taagctaaagtacaatgtaaaactaattacttgtactacaagatttcttactattatccttattatcatttgaac 345  Q
    ||||||| |||| |||||||| |||||||||||||||||||| ||||| | ||| |||| ||||||  |||||||    
T  17132206 taagctagagtaaaatgtaaa-ctaattacttgtactacaagttttctcattatcatccctattatgctttgaac 17132133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 633 - 684
Target Start/End: Original strand, 11649426 - 11649477
Alignment:
Q  633 aattagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||| |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  11649426 aatttgagagaagcatggttaagaccttcgaatcctccgaagttctcctatg 11649477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 638 - 684
Target Start/End: Complemental strand, 26060635 - 26060589
Alignment:
Q  638 gagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  26060635 gagagaagcatggttaagaccttcgaatcctccgaagttctcctatg 26060589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 507
Target Start/End: Complemental strand, 24151028 - 24150961
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgt 507  Q
    |||||||| ||||||||||| ||||||| | ||||||||| ||||||  | ||| |||||||||||||    
T  24151028 tgatagatttttggcaagtgtaccaaatactatcgaagtagtaaaaatattgttcccacgaggactgt 24150961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 440 - 507
Target Start/End: Original strand, 38283247 - 38283314
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgt 507  Q
    |||||||| ||||||||||| ||||||| | ||||||||| ||||||  | ||| |||||||||||||    
T  38283247 tgatagatttttggcaagtgtaccaaatactatcgaagtagtaaaaatattgttcccacgaggactgt 38283314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 563 - 616
Target Start/End: Original strand, 11649328 - 11649382
Alignment:
Q  563 gtgccctaggcagttgagttga-tttagtaacataaactaattaaaaacaataaa 616  Q
    |||||||||||||||||||||| ||| |||| |||||| || |||||||||||||    
T  11649328 gtgccctaggcagttgagttgacttttgtaatataaacgaaataaaaacaataaa 11649382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 439 - 556
Target Start/End: Complemental strand, 19929243 - 19929126
Alignment:
Q  439 ctgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaat-tcgtttccacgaggactgtatttaacttctacttagcaatttcattatt 537  Q
    ||||||||||||||||||||| |||||   | ||||||||| ||| |||| ||| |||||||||||| ||  |||| ||||||||||||| ||| ||       
T  19929243 ctgatagatatttggcaagtgtaccaataactatcgaagtagtaataaatatcg-ttccacgaggaccgttgttaatttctacttagcaagttctttgac 19929145  T
Q  538 aaaaaggatgtataaattt 556  Q
    | ||||||||| |||||||    
T  19929144 ataaaggatgtgtaaattt 19929126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 507
Target Start/End: Complemental strand, 29325168 - 29325110
Alignment:
Q  449 tttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgt 507  Q
    ||||||||||| ||||||| | ||||||||| ||||||  ||||| |||||||||||||    
T  29325168 tttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgt 29325110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 507
Target Start/End: Original strand, 40616583 - 40616641
Alignment:
Q  449 tttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgt 507  Q
    ||||||||||| ||||||| | ||||||||| ||||||  ||||| |||||||||||||    
T  40616583 tttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgt 40616641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 440 - 507
Target Start/End: Complemental strand, 18911861 - 18911793
Alignment:
Q  440 tgatagatatttg-gcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgt 507  Q
    ||||||||||||  ||||||| || |||| | ||||||||| ||||||  |||||||||||||||||||    
T  18911861 tgatagatattttagcaagtgtactaaatactatcgaagtagtaaaaatatcgtttccacgaggactgt 18911793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 440 - 558
Target Start/End: Original strand, 33400075 - 33400195
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataa-aaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    |||||||||||||||||||| ||||||  | ||||| ||| ||| ||| ||||| |||||||| || ||  |||| |||| |||||||| ||| |||  |    
T  33400075 tgatagatatttggcaagtgtaccaaaagctatcgaggtagtaataaagttcgtatccacgagaaccgttgttaatttctgcttagcaagttcgttaaaa 33400174  T
Q  539 aaaaggatgt-ataaatttat 558  Q
     ||||||||| ||||||||||    
T  33400175 taaaggatgtaataaatttat 33400195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 151; Significance: 2e-79; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 439 - 684
Target Start/End: Original strand, 24184 - 24426
Alignment:
Q  439 ctgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    |||||||| |||||||||||| ||||||  | ||||||||| ||| ||||| ||||||||||||||||||||||||||||||| | ||||||||||||||    
T  24184 ctgatagaaatttggcaagtgtaccaaaagctatcgaagtagtaataaatttgtttccacgaggactgtatttaacttctactcaacaatttcattatta 24283  T
Q  539 aaaaggatgtataaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattag 638  Q
    |||||||||||||||||  |||| |||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||| |||||||||||||| |    
T  24284 aaaaggatgtataaattattattggtgccctaggcagttgagttgatttagta--ataaactgattaaaaacaataaagaattggtttttagaaaatt-g 24380  T
Q  639 agagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||| ||||||||| |||||||||||||||||  |||||||||    
T  24381 agagaagcatggttaagtccttcgaatcctccgaagctctcctatg 24426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 2e-60; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 440 - 673
Target Start/End: Original strand, 12575300 - 12575532
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 539  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||| ||||||| ||||||||||||||  |||||||||||| | ||| |||||||||||    
T  12575300 tgataaatatttggcaagtgtaccaaattcaatcgaagtaataaataattcgtatccacgaggactgttgttaacttctactcaacaagttcattattaa 12575399  T
Q  540 aaaggatgtataaatttatattagtgccctaggcagttgagttga-tttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattag 638  Q
    ||||||||||| || ||  | | |||||||||||||||||||||| ||| |||||||||| | |||||||||||||||  ||| | ||||||||||||||    
T  12575400 aaaggatgtattaaatt-caatggtgccctaggcagttgagttgatttttgtaacataaattgattaaaaacaataaaagatt-ggttttagaaaattag 12575497  T
Q  639 agagaagtatggttaagaccttcgaatcctccgaa 673  Q
    |||||||||||||||||||| | ||||||||||||    
T  12575498 agagaagtatggttaagaccattgaatcctccgaa 12575532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 440 - 684
Target Start/End: Complemental strand, 14418707 - 14418467
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 539  Q
    |||||||| ||||||||||||||||||  | ||||||||| |||| |||||||| |||||||||| ||  |||||| | ||||||||||||| |||| ||    
T  14418707 tgatagatttttggcaagtgaaccaaag-ctatcgaagtagtaaataattcgtt-ccacgaggaccgttgttaactacaacttagcaatttctttatcaa 14418610  T
Q  540 aaaggatgtataaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattaga 639  Q
    ||||||| | | || ||  ||   |||||||||||||||||||| |||  |||||||||| |||||||||||||||| | || ||||| |||| ||||||    
T  14418609 aaaggatatgttaaattcaatggttgccctaggcagttgagttggtttt-taacataaacaaattaaaaacaataaa-agttggttttaagaatattaga 14418512  T
Q  640 gagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||    
T  14418511 gagaagtatggttaagacattcgaatcctccgaatttctcctatg 14418467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 563 - 686
Target Start/End: Original strand, 41778865 - 41778987
Alignment:
Q  563 gtgccctaggcagttgagttgattta-gtaacataaactaattaaaaacaataaagaattagtttttagaaaattagagagaagtatggttaagaccttc 661  Q
    ||||||||||||||||| |||||||  ||||||||||| ||||||||||||||||  |||    ||||||| |||| |||||||||||||||||||||||    
T  41778865 gtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagatt--gatttagaagattaaagagaagtatggttaagaccttc 41778962  T
Q  662 gaatcctccgaaattctcctatgct 686  Q
     |||| |||||| ||||||||||||    
T  41778963 aaatcttccgaagttctcctatgct 41778987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 605 - 684
Target Start/End: Complemental strand, 13097100 - 13097022
Alignment:
Q  605 aaaaacaataaagaattagtttttagaaaattagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  13097100 aaaaacaataaaagattagtttt-agaaaattagagagaagtatggttaagaccttcgaatcctccgaagttatcctatg 13097022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 633 - 684
Target Start/End: Original strand, 41836415 - 41836466
Alignment:
Q  633 aattagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||| |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  41836415 aatttgagagaagcatggttaagaccttcgaatcctccgaagttctcctatg 41836466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 440 - 558
Target Start/End: Complemental strand, 9467429 - 9467309
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataa-aaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    |||||||||||||||||||| ||||||  | ||||||||| ||| ||| ||||| ||||||||||| ||  |||| |||| |||||||| ||| |||  |    
T  9467429 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttcttcttagcaagttcgttaaaa 9467330  T
Q  539 aaaaggatgta-taaatttat 558  Q
     |||||||||| |||||||||    
T  9467329 taaaggatgtagtaaatttat 9467309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 625 - 673
Target Start/End: Complemental strand, 44008356 - 44008308
Alignment:
Q  625 ttttagaaaattagagagaagtatggttaagaccttcgaatcctccgaa 673  Q
    ||||||||||||||| |||| |||||||| |||||||||||||||||||    
T  44008356 ttttagaaaattagaaagaattatggttatgaccttcgaatcctccgaa 44008308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 634 - 673
Target Start/End: Complemental strand, 14418435 - 14418396
Alignment:
Q  634 attagagagaagtatggttaagaccttcgaatcctccgaa 673  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  14418435 attagagagaagtatggttaagacattcgaatcctccgaa 14418396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 505
Target Start/End: Original strand, 10498016 - 10498081
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggact 505  Q
    |||||||| ||||||||||| ||||||| | ||||||||| ||||||  ||||| |||||||||||    
T  10498016 tgatagatttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggact 10498081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 439 - 507
Target Start/End: Complemental strand, 16954129 - 16954060
Alignment:
Q  439 ctgatagatattt-ggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgt 507  Q
    ||||||||||||| |||||||| ||||||| | ||||||||| ||||||  ||||| |||||||||||||    
T  16954129 ctgatagatattttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgt 16954060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 438 - 506
Target Start/End: Complemental strand, 31285030 - 31284962
Alignment:
Q  438 actgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactg 506  Q
    |||||||||| ||||||||||| ||||||| | ||||||||| ||||||  ||||| |||| |||||||    
T  31285030 actgatagatttttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 31284962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 507
Target Start/End: Original strand, 18825665 - 18825723
Alignment:
Q  449 tttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgt 507  Q
    ||||||||||| ||||||| | ||||||||| ||||||  ||||| |||||||||||||    
T  18825665 tttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgt 18825723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 563 - 616
Target Start/End: Original strand, 41836317 - 41836371
Alignment:
Q  563 gtgccctaggcagttgagttga-tttagtaacataaactaattaaaaacaataaa 616  Q
    |||||||||||||||||||||| ||| |||| |||||| || |||||||||||||    
T  41836317 gtgccctaggcagttgagttgacttttgtaatataaacgaaataaaaacaataaa 41836371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 527
Target Start/End: Complemental strand, 453952 - 453863
Alignment:
Q  439 ctgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaa 527  Q
    |||||||||||||| |||||| ||||||  | || |||||| ||| ||| ||||| ||||||||||| ||  |||| |||||||||||||    
T  453952 ctgatagatatttgacaagtgtaccaaaaactatggaagtactaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 453863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 442 - 506
Target Start/End: Original strand, 44026858 - 44026922
Alignment:
Q  442 atagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactg 506  Q
    |||||| ||||||||||| ||||||| | ||||||||| ||||||  ||||| |||| |||||||    
T  44026858 atagatgtttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacaaggactg 44026922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 2e-51; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 440 - 684
Target Start/End: Complemental strand, 10765165 - 10764921
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    |||||||||||||||||||| ||||||  | ||||||||| ||| ||| ||||| ||||||||||| ||  |||| |||||||  |||||||| |||| |    
T  10765165 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 10765066  T
Q  539 aaaaggatgtataaatttatatt-agtgccctaggcagttgagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaatt 636  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||| ||| ||||| ||||||| | || ||||| |||| |||    
T  10765065 aaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaa-caataaa-agttggttttcagaatatt 10764969  T
Q  637 agagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  10764968 agagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 10764921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 440 - 684
Target Start/End: Complemental strand, 13493508 - 13493264
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    |||||||||||||||||||| ||||||  | ||||||||| ||| ||| ||||| ||||||||||| ||  |||| |||||||  |||||||| |||| |    
T  13493508 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 13493409  T
Q  539 aaaaggatgtataaatttatatt-agtgccctaggcagttgagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaatt 636  Q
    ||||||||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||| ||| ||||| ||||||| | || ||||| |||| |||    
T  13493408 aaaaggatgtataaatttatattgattgccctaggcagttgagttgtttt-gtaacataaacgtaaataaaa-caataaa-agttggttttcagaatatt 13493312  T
Q  637 agagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  13493311 agagagaagtatggttaagaccttcgaatcctctgaagttctcctatg 13493264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 441 - 684
Target Start/End: Complemental strand, 1936873 - 1936628
Alignment:
Q  441 gatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaaa 540  Q
    ||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||| | |||  |  ||||||||||||| |||||||||||| |||     
T  1936873 gatagatatttggcaagtgaaccaaattcaatcgaagtaatgaataattcatttccacaatgaccattgttaacttctacttggcaatttcattagtaat 1936774  T
Q  541 aaggatgtataaatttatattagt-gccctaggcagttgagttgatt-tagtaacataaact-aattaaaaacaataaagaattagtttttagaaaatta 637  Q
    || ||||||| || ||  ||  || | |||||||||||||||||||| | ||| |||||||| ||||||||||  |||| | || | |||||||||||||    
T  1936773 aacgatgtattaaattcaatgggttgacctaggcagttgagttgattgttgtatcataaactgaattaaaaacggtaaa-attttggttttagaaaatta 1936675  T
Q  638 gagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  1936674 gagagaagtatggttaagaccttcgaatcctccgaagttctcctatg 1936628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 439 - 684
Target Start/End: Complemental strand, 13496233 - 13495989
Alignment:
Q  439 ctgatagatatttggcaagtgaaccaaattcgatcgaagtaataaa-aaattcgtttccacgaggactgtatttaacttctacttagcaatttcattatt 537  Q
    |||||||| ||||| |||||||||||||  | |||||||||||||| |||||||| ||||||||||| ||  |||| |||||||  |||||||| ||||     
T  13496233 ctgatagagatttgacaagtgaaccaaaa-ctatcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcggcaatttctttatc 13496135  T
Q  538 aaaaaggatgtataaatttatatt-agtgccctaggcagttgagttgatttagtaacataaac-taattaaaaacaataaagaattagtttttagaaaat 635  Q
    |||||||||||||||||||||||| | || ||||||||||||| ||| ||| ||||||||||| ||| ||||| ||||||| | ||  |||| |||| ||    
T  13496134 aaaaaggatgtataaatttatattgattgtcctaggcagttgaattgtttt-gtaacataaacgtaaataaaa-caataaa-agttgattttaagaatat 13496038  T
Q  636 tagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  13496037 tagagagaagtatggttaagacctttgaatcctccgaagttctcctatg 13495989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 563 - 684
Target Start/End: Complemental strand, 34066467 - 34066346
Alignment:
Q  563 gtgccctaggcagttgagttgattta-gtaacataaactaattaaaaacaataaagaattagtttttagaaaattagagagaagtatggttaagaccttc 661  Q
    ||||||||||||||||| |||||||  ||||||||||| ||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||||||||    
T  34066467 gtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggtttt-agaaaattagagagaagtatggttaagaccttc 34066369  T
Q  662 gaatcctccgaaattctcctatg 684  Q
    |||||||||||| ||||||||||    
T  34066368 gaatcctccgaagttctcctatg 34066346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 439 - 684
Target Start/End: Original strand, 32505856 - 32506098
Alignment:
Q  439 ctgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaat-tcgtttccacgaggac---tgtat-ttaacttctacttagcaatttcat 533  Q
    ||||||||||||||||||||||||||||  | |||||||||||||| ||  |||| |||||||||||   || || ||||||||||||   ||||||| |    
T  32505856 ctgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataagatcgtatccacgaggaccattgcatgttaacttctactcgacaatttctt 32505954  T
Q  534 tattaaaaaggatgtataaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagtttttagaaa 633  Q
    ||| ||||||||||||||||||||||||  |||   |||||||||      |||  |||||||||| |||||||||||||||| | || ||||| ||||     
T  32505955 tatcaaaaaggatgtataaatttatattgatgcgtgaggcagttg------ttttctaacataaacgaattaaaaacaataaa-agttggttttaagaat 32506047  T
Q  634 attagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||| |||||||| |||||||||||||||||||||||||| ||||||||||    
T  32506048 attatagagaagtgtggttaagaccttcgaatcctccgaagttctcctatg 32506098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 563 - 684
Target Start/End: Original strand, 16190301 - 16190421
Alignment:
Q  563 gtgccctaggcagttgagttgat-ttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattagagagaagtatggttaagaccttc 661  Q
    |||||||||| | |||||||||| || ||||||||||| |||||||||||||||||| |  | ||||||||||||| |||||||||||||||||||||||    
T  16190301 gtgccctaggaaattgagttgatgtttgtaacataaacgaattaaaaacaataaagatt--ggttttagaaaattaaagagaagtatggttaagaccttc 16190398  T
Q  662 gaatcctccgaaattctcctatg 684  Q
    |||||||||||| ||||||||||    
T  16190399 gaatcctccgaagttctcctatg 16190421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 440 - 684
Target Start/End: Complemental strand, 39546486 - 39546244
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaat-tcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    ||||||| ||||||||||||||||||| |  || ||||||||||| ||  |||| || ||||||||  |  ||||||| |||| ||||||||||||||      
T  39546486 tgatagagatttggcaagtgaaccaaaatt-attgaagtaataaataagatcgtatc-acgaggaccattgttaacttttactcagcaatttcattatcg 39546389  T
Q  539 aaaaggatgtataaatttatattagtgccctaggcagttgagttgattta-gtaacataaactaattaaaaacaataaagaattagtttttagaaaatta 637  Q
    ||| |||||||| || ||  |||  |||||||||||||||  ||| |||  ||||| |||||  |   ||||||||||| | || ||||| | || ||||    
T  39546388 aaa-ggatgtattaaattcaattgttgccctaggcagttggattggtttttgtaacgtaaacgcaaataaaacaataaa-agttggttttaaaaatatta 39546291  T
Q  638 gagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||    
T  39546290 gagagaagtatggttaagaccttcgaatcctccgaagttctcatatg 39546244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 47746460 - 47746511
Alignment:
Q  34 gcattgcatgaaaacaagtacaagatggaaaatgcttggaagttcttcaatt 85  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  47746460 gcattgcatggaaacaagtacaagatggaaaatgctcggaagttcttcaatt 47746511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 47718646 - 47718716
Alignment:
Q  19 ttatgggctccaaatgcattgcatgaaaac----aagtacaagatggaaaatgcttggaagttcttcaatt 85  Q
    |||||||||||| |||||||||||||||||    ||||||||||||||||||||| ||||||| |||||||    
T  47718646 ttatgggctccatatgcattgcatgaaaacaaacaagtacaagatggaaaatgctcggaagtttttcaatt 47718716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 562 - 641
Target Start/End: Complemental strand, 8435359 - 8435280
Alignment:
Q  562 agtgccctaggcagttgagttga-tttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattagaga 641  Q
    ||||||||||||||||||||||| ||| |||||||||||  | ||||||||||||| | || |||||||||||||||||||    
T  8435359 agtgccctaggcagttgagttgatttttgtaacataaacataataaaaacaataaa-agttggtttttagaaaattagaga 8435280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 684
Target Start/End: Original strand, 27282301 - 27282351
Alignment:
Q  634 attagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||||||    
T  27282301 attagagagaagtatggttaagactttcgaattctccgaagttctcctatg 27282351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 440 - 549
Target Start/End: Complemental strand, 49716735 - 49716625
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 538  Q
    ||||||||| ||| |||||| ||||||  | ||||||||||||| ||| ||||| ||||||||||| ||  |||| ||||||||||||| ||| |||  |    
T  49716735 tgatagataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaa 49716636  T
Q  539 aaaaggatgta 549  Q
     ||||||||||    
T  49716635 taaaggatgta 49716625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 632 - 684
Target Start/End: Original strand, 22456684 - 22456736
Alignment:
Q  632 aaattagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||| ||||||  ||||| ||||||||||||||||||||| ||||||||||    
T  22456684 aaattaaagagaaaaatggtcaagaccttcgaatcctccgaagttctcctatg 22456736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 449 - 507
Target Start/End: Original strand, 45960522 - 45960580
Alignment:
Q  449 tttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgt 507  Q
    ||||||||||| ||||||| | ||||||||| ||||||  ||||| |||||||||||||    
T  45960522 tttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgt 45960580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 647 - 684
Target Start/End: Complemental strand, 49147936 - 49147899
Alignment:
Q  647 atggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  49147936 atggtcaagaccttcgaatcctccgaagttctcctatg 49147899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 527
Target Start/End: Complemental strand, 49720214 - 49720129
Alignment:
Q  443 tagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaa 527  Q
    |||||| ||| |||||| ||||||  | ||||||||||||| ||| ||||| ||||||||||| ||  |||| |||||||||||||    
T  49720214 tagataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 49720129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 632 - 672
Target Start/End: Complemental strand, 15297385 - 15297345
Alignment:
Q  632 aaattagagagaagtatggttaagaccttcgaatcctccga 672  Q
    |||||| |||||| |||| ||||||||||||||||||||||    
T  15297385 aaattaaagagaaatatgattaagaccttcgaatcctccga 15297345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 640 - 672
Target Start/End: Complemental strand, 21153301 - 21153269
Alignment:
Q  640 gagaagtatggttaagaccttcgaatcctccga 672  Q
    ||||| |||||||||||||||||||||||||||    
T  21153301 gagaaatatggttaagaccttcgaatcctccga 21153269  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 440 - 507
Target Start/End: Complemental strand, 31205194 - 31205126
Alignment:
Q  440 tgatagatattt-ggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgt 507  Q
    |||||||||||| |||||||| ||||||| | || |||||| ||||||  ||||| |||||||||||||    
T  31205194 tgatagatattttggcaagtgtaccaaatactattgaagtagtaaaaatatcgttcccacgaggactgt 31205126  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 440 - 527
Target Start/End: Original strand, 34552438 - 34552525
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaa-ttcgtttccacgaggactgtatttaacttctacttagcaa 527  Q
    ||||||||||||| |||||| ||||||  | ||||||||| ||| ||| ||||| ||||||||||| ||  |||| |||||||||||||    
T  34552438 tgatagatatttgacaagtgtaccaaaa-ctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaa 34552525  T

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Target: scaffold0363 (Bit Score: 93; Significance: 6e-45; HSPs: 2)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 440 - 684
Target Start/End: Original strand, 11 - 251
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 539  Q
    |||||||| ||||||||||||||||||  | ||||||||| |||| |||||||| |||||||||| ||  |||||| | ||||||||||||| |||| ||    
T  11 tgatagatttttggcaagtgaaccaaag-ctatcgaagtagtaaataattcgtt-ccacgaggaccgttgttaactacaacttagcaatttctttatcaa 108  T
Q  540 aaaggatgtataaatttatattagtgccctaggcagttgagttgatttagtaacataaactaattaaaaacaataaagaattagtttttagaaaattaga 639  Q
    ||||||| | | || ||  ||   |||||||||||||||||||| |||  |||||||||| |||||||||||||||| | || ||||| |||| ||||||    
T  109 aaaggatatgttaaattcaatggttgccctaggcagttgagttggtttt-taacataaacaaattaaaaacaataaa-agttggttttaagaatattaga 206  T
Q  640 gagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||    
T  207 gagaagtatggttaagacattcgaatcctccgaatttctcctatg 251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 634 - 673
Target Start/End: Original strand, 283 - 322
Alignment:
Q  634 attagagagaagtatggttaagaccttcgaatcctccgaa 673  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  283 attagagagaagtatggttaagacattcgaatcctccgaa 322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 625 - 684
Target Start/End: Original strand, 5995 - 6054
Alignment:
Q  625 ttttagaaaattagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  5995 ttttagaaaattagagagaagtatggttaagaccttcgaatcctccgaggttctcctatg 6054  T

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Target: scaffold0068 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 437 - 558
Target Start/End: Original strand, 33727 - 33849
Alignment:
Q  437 cactgatagatatttggcaagtgaaccaaattcgatcgaagtaataa-aaaattcgtttccacgaggactgtatttaacttctacttagcaatttcatta 535  Q
    ||||||||||||||||||||||| ||||||  | ||||||||| ||| ||| || || ||||||||||| ||  |||| ||||||||||||| ||| |||    
T  33727 cactgatagatatttggcaagtgtaccaaa-actatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctacttagcaagttcgtta 33825  T
Q  536 ttaaaaaggatgta-taaatttat 558  Q
      | |||||||||| |||||||||    
T  33826 aaataaaggatgtactaaatttat 33849  T

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Target: scaffold0352 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 631 - 684
Target Start/End: Original strand, 2794 - 2847
Alignment:
Q  631 aaaattagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||  |||||||||    
T  2794 aaaatttgagagaagtatcgttaagacctttgaatcctccgaagctctcctatg 2847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 448 - 550
Target Start/End: Original strand, 2627 - 2728
Alignment:
Q  448 atttggcaagtgaaccaaattcgatcgaagtaataaaaaat-tcgtttccacgaggactgtatttaacttctacttagcaatttcattattaaaaaggat 546  Q
    |||||||||||| ||||||  | |||||||||||||| ||  |||| ||||||||||| ||  |||||||||||| ||||||||| ||| | ||||||||    
T  2627 atttggcaagtggaccaaaa-ctatcgaagtaataaataagatcgtatccacgaggaccgttgttaacttctactcagcaatttcgtta-tcaaaaggat 2724  T
Q  547 gtat 550  Q
    ||||    
T  2725 gtat 2728  T

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Target: scaffold0250 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 440 - 507
Target Start/End: Complemental strand, 19752 - 19684
Alignment:
Q  440 tgatagatattt-ggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgt 507  Q
    |||||||||||| |||||||| ||||||| | ||||||||| ||||||  ||||| |||||||||||||    
T  19752 tgatagatattttggcaagtgtaccaaatactatcgaagtagtaaaaatatcgttcccacgaggactgt 19684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 535
Target Start/End: Complemental strand, 3739 - 3656
Alignment:
Q  449 tttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcatta 535  Q
    ||||||||||| ||||| ||| |||||||||||||||  || || ||||||||||| ||  |||||||||||| |||||||| ||||    
T  3739 tttggcaagtgtaccaa-ttctatcgaagtaataaaa--tttgtatccacgaggaccgttgttaacttctactcagcaatttaatta 3656  T

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Target: scaffold0500 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 625 - 684
Target Start/End: Complemental strand, 2754 - 2695
Alignment:
Q  625 ttttagaaaattagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||||||  |||||||| ||||||||| ||||||||||||| || | |||||||||    
T  2754 ttttagaaaatctgagagaagaatggttaagtccttcgaatcctctgatactctcctatg 2695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 625 - 684
Target Start/End: Original strand, 7177 - 7236
Alignment:
Q  625 ttttagaaaattagagagaagtatggttaagaccttcgaatcctccgaaattctcctatg 684  Q
    |||||||||||  |||||||| ||||||||| ||||||||||||| || | |||||||||    
T  7177 ttttagaaaatctgagagaagaatggttaagtccttcgaatcctctgatactctcctatg 7236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 513
Target Start/End: Original strand, 65087 - 65160
Alignment:
Q  440 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaa 513  Q
    |||||||  ||||||||||||||||||| | ||| ||||| ||||||  ||||| |||||| |||||| |||||    
T  65087 tgatagaattttggcaagtgaaccaaatactatccaagtagtaaaaatatcgttcccacgatgactgtttttaa 65160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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