View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17833_high_83 (Length: 298)
Name: NF17833_high_83
Description: NF17833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17833_high_83 |
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Alignment Details
Target: chr4 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 7 - 281
Target Start/End: Original strand, 3345451 - 3345725
Alignment:
| Q |
7 |
aggagcagagagagtattgcattcacaaagaatgtgctcagactttgaaattaatgtgaaaattacaaacatgctacacatttttgtgtttacttcaact |
106 |
Q |
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|||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3345451 |
aggaccagagagagtattgcattcacaaagaatgtgcttagactttgaaattaatgtgaaaattacaaacatgctacacatttttgtgtttacttcaact |
3345550 |
T |
|
| Q |
107 |
agaattaaagctcaaggaaaaatgcatgacaatatcaacaacgttatgttaatatgaaagtaaatagaactagttgaacattaattgataatatgcacca |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3345551 |
agaattaaagctcaaggaaaaatgcatgacaatatcaacaacattatgttaatatgaaagtaaatagaactagttgaacattaattgataatatgcacca |
3345650 |
T |
|
| Q |
207 |
aatcaattaatattagctatacttctcttaattgcaatccataaatttcaaagagagtgagttagcatacatacc |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3345651 |
aatcaattaatattagctatacttctcttaattgcaatccataaatttcaaagagagtgagttagcatacatacc |
3345725 |
T |
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