View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17833_high_84 (Length: 293)
Name: NF17833_high_84
Description: NF17833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17833_high_84 |
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Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 26 - 277
Target Start/End: Original strand, 31412558 - 31412808
Alignment:
| Q |
26 |
tgaaggaagtggtaacactcacggttggtggaaattgtggatggagaaggaaggaattgaagagagggaaatgatgagtagaaaaagcagcaccatattg |
125 |
Q |
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| T |
31412558 |
tgaaggaagtggtaacactcacggttggtggaaattgtggatggagaaggaaggaattgaagagagggaaatgatgagtagaaaaagcagcaccatattg |
31412657 |
T |
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| Q |
126 |
ggattatggttgaagaaaagttgaagaaacaaaccatattattcataatgatcataatggatgatgaaaaagaagaagaggaaaaggtaagaatattggg |
225 |
Q |
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| T |
31412658 |
ggattatggttgaagaaaagctgaagaaacaaaccatattattcataatgatcataatggatgatg-aaaagaagaagaggaaaaggtaagaatattggg |
31412756 |
T |
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| Q |
226 |
aaatgaaggaaaacttagagagcggtgtaagttaagaatcatggtggagaag |
277 |
Q |
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| T |
31412757 |
aaatgaaggaaaacctagagagcggtgtaagttaagaatcatggtggagaag |
31412808 |
T |
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