View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17833_high_93 (Length: 273)
Name: NF17833_high_93
Description: NF17833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17833_high_93 |
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Alignment Details
Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 17 - 257
Target Start/End: Original strand, 53764128 - 53764367
Alignment:
| Q |
17 |
attattttgtgttcatatatgttatattagcttaatttttgtcatgtattctttttagttaacaatgtcgtgattttattagtaaaatactaagattcac |
116 |
Q |
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| T |
53764128 |
attattttgtgttcatatatgttatattagcttaatttttgtcatgtattctttttagttaacaatgtcgtgattttattagtaaaatactaagattcac |
53764227 |
T |
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| Q |
117 |
gataagatttgtttcaccattcgaaaaataagtgttcttattcacgaaggtagatttacatgtaatagtacaatgccaggagaatcaccaaaaggaatac |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
53764228 |
gataagatttgtttcaccattcgaaaaataagtgttcttattcacgaaggtagatttacatgtaatagtacaatg-caggagaatcaccaaaaggaatac |
53764326 |
T |
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| Q |
217 |
aagatcttctatgggtccaatcgacatgcaaaatagcatca |
257 |
Q |
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|||||||| |||||||||||||||||||||||||||||||| |
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| T |
53764327 |
aagatcttttatgggtccaatcgacatgcaaaatagcatca |
53764367 |
T |
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