View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17833_low_127 (Length: 220)
Name: NF17833_low_127
Description: NF17833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17833_low_127 |
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Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 38109580 - 38109765
Alignment:
| Q |
18 |
aggaaggggtggaggtctgtcctgtgatgtagtcaaggcacggagaaagacttatgagcacattggcgcaatttgagtcggtttgtgccactgtgacacc |
117 |
Q |
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| T |
38109580 |
aggaaggggtggaggtctgtcctgtgatgtagtcaaggcacggagaaagacttatgagcacattggcgcaatttgagtcggtttgtgccactgtgacacc |
38109679 |
T |
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| Q |
118 |
cctaagagccaccataacaaataacatgcttagcagcatctcaatgcttctctgtgccattgttttaagatattgtgatgagtttt |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38109680 |
cctaagagccaccataacaaataacatgcttagcagcatctcaatgcttctctgtgccattgttttaagatattgtgatgagtttt |
38109765 |
T |
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