View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17833_low_26 (Length: 517)

Name: NF17833_low_26
Description: NF17833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17833_low_26
NF17833_low_26
[»] chr1 (49 HSPs)
chr1 (76-302)||(12788882-12789107)
chr1 (431-502)||(12796652-12796723)
chr1 (9-80)||(24422795-24422866)
chr1 (9-75)||(51684366-51684432)
chr1 (8-77)||(12390015-12390084)
chr1 (19-76)||(52827346-52827403)
chr1 (9-77)||(35067037-35067105)
chr1 (9-81)||(51685800-51685872)
chr1 (9-84)||(41364820-41364894)
chr1 (9-76)||(52274967-52275034)
chr1 (27-85)||(11437252-11437310)
chr1 (90-184)||(28553573-28553667)
chr1 (22-76)||(35594216-35594270)
chr1 (9-78)||(11190382-11190451)
chr1 (303-343)||(12796318-12796358)
chr1 (9-77)||(14999283-14999350)
chr1 (27-76)||(11436041-11436090)
chr1 (27-76)||(36612852-36612901)
chr1 (19-80)||(39699812-39699872)
chr1 (19-75)||(45148581-45148637)
chr1 (9-81)||(45150006-45150077)
chr1 (9-72)||(39153151-39153214)
chr1 (1-72)||(43378740-43378810)
chr1 (9-72)||(45156052-45156115)
chr1 (9-76)||(45157244-45157310)
chr1 (9-75)||(36613939-36614005)
chr1 (26-79)||(2260629-2260682)
chr1 (9-78)||(23980501-23980570)
chr1 (9-85)||(35595227-35595304)
chr1 (27-72)||(37526930-37526975)
chr1 (19-75)||(39222518-39222575)
chr1 (19-76)||(39698562-39698619)
chr1 (9-81)||(43060041-43060113)
chr1 (27-75)||(50681657-50681705)
chr1 (18-77)||(7983048-7983106)
chr1 (367-402)||(12796382-12796417)
chr1 (9-72)||(24426110-24426173)
chr1 (9-75)||(46066525-46066589)
chr1 (19-77)||(50680330-50680387)
chr1 (18-75)||(29182001-29182058)
chr1 (23-76)||(33088666-33088719)
chr1 (1-74)||(48471864-48471937)
chr1 (27-80)||(52828123-52828176)
chr1 (21-53)||(16281317-16281349)
chr1 (34-82)||(21185201-21185249)
chr1 (20-76)||(24491155-24491211)
chr1 (29-76)||(39221357-39221405)
chr1 (28-76)||(41366184-41366232)
chr1 (9-77)||(43058784-43058851)
[»] chr3 (61 HSPs)
chr3 (375-442)||(27442882-27442949)
chr3 (9-77)||(51038825-51038893)
chr3 (375-442)||(27446038-27446105)
chr3 (9-76)||(54539754-54539821)
chr3 (9-79)||(7758398-7758468)
chr3 (9-77)||(22776847-22776915)
chr3 (19-79)||(47615593-47615653)
chr3 (19-82)||(47609690-47609753)
chr3 (9-80)||(49216242-49216313)
chr3 (9-76)||(54540825-54540892)
chr3 (9-75)||(51037536-51037601)
chr3 (9-77)||(19984847-19984915)
chr3 (303-351)||(27442847-27442895)
chr3 (303-351)||(27446003-27446051)
chr3 (9-77)||(29931224-29931292)
chr3 (9-77)||(29980378-29980446)
chr3 (19-80)||(7267639-7267699)
chr3 (28-81)||(53614813-53614866)
chr3 (9-84)||(12700166-12700239)
chr3 (1-72)||(40426805-40426877)
chr3 (93-184)||(8890696-8890787)
chr3 (93-168)||(12881564-12881639)
chr3 (9-76)||(46721255-46721322)
chr3 (19-77)||(5001198-5001256)
chr3 (9-75)||(46719941-46720007)
chr3 (9-78)||(534496-534565)
chr3 (28-77)||(23769855-23769904)
chr3 (95-184)||(31139223-31139312)
chr3 (9-85)||(8875896-8875972)
chr3 (27-75)||(52840657-52840705)
chr3 (22-77)||(19986120-19986175)
chr3 (19-81)||(34019190-34019250)
chr3 (106-168)||(20487939-20488001)
chr3 (22-76)||(29932746-29932800)
chr3 (22-76)||(29981900-29981954)
chr3 (19-77)||(47610625-47610683)
chr3 (27-80)||(535835-535888)
chr3 (21-82)||(28263158-28263219)
chr3 (21-78)||(52281594-52281651)
chr3 (21-77)||(28262191-28262246)
chr3 (19-75)||(47614185-47614241)
chr3 (1-77)||(51347266-51347342)
chr3 (19-75)||(51469972-51470028)
chr3 (21-77)||(52276302-52276358)
chr3 (21-68)||(22775783-22775829)
chr3 (9-80)||(39844232-39844303)
chr3 (19-78)||(51470500-51470558)
chr3 (9-76)||(55192030-55192096)
chr3 (135-181)||(4864098-4864144)
chr3 (27-77)||(7268880-7268929)
chr3 (1-75)||(8338940-8339014)
chr3 (18-76)||(8542609-8542667)
chr3 (27-80)||(5029736-5029788)
chr3 (1-66)||(6170281-6170346)
chr3 (9-74)||(8456479-8456543)
chr3 (9-78)||(11671376-11671444)
chr3 (9-76)||(12703535-12703601)
chr3 (3-72)||(39843054-39843123)
chr3 (28-81)||(53616070-53616123)
chr3 (21-84)||(18456110-18456174)
chr3 (27-75)||(25336358-25336406)
[»] chr6 (32 HSPs)
chr6 (9-79)||(16704532-16704602)
chr6 (19-77)||(7316339-7316397)
chr6 (17-77)||(27437826-27437886)
chr6 (9-80)||(6842318-6842389)
chr6 (19-76)||(3721611-3721668)
chr6 (23-80)||(3722556-3722613)
chr6 (1-81)||(30495725-30495803)
chr6 (19-79)||(8821869-8821929)
chr6 (19-75)||(8822838-8822894)
chr6 (19-78)||(8659262-8659321)
chr6 (19-77)||(10784590-10784649)
chr6 (22-76)||(8660251-8660305)
chr6 (126-188)||(31817622-31817684)
chr6 (18-84)||(32451973-32452039)
chr6 (9-86)||(26574608-26574685)
chr6 (3-80)||(27443745-27443822)
chr6 (22-78)||(16415581-16415637)
chr6 (22-73)||(26717132-26717183)
chr6 (22-80)||(7314875-7314933)
chr6 (22-80)||(14822355-14822413)
chr6 (27-77)||(27447966-27448016)
chr6 (1-70)||(29473082-29473151)
chr6 (23-78)||(13345549-13345603)
chr6 (26-77)||(34834631-34834682)
chr6 (9-78)||(6840191-6840258)
chr6 (19-85)||(12382756-12382822)
chr6 (17-75)||(15907914-15907972)
chr6 (18-76)||(20973343-20973401)
chr6 (19-77)||(27322113-27322170)
chr6 (19-72)||(1829648-1829701)
chr6 (22-78)||(22968404-22968460)
chr6 (22-78)||(23819933-23819989)
[»] chr8 (44 HSPs)
chr8 (1-77)||(11282006-11282082)
chr8 (159-272)||(45503586-45503697)
chr8 (9-85)||(12351911-12351987)
chr8 (9-85)||(29043388-29043464)
chr8 (19-77)||(10007808-10007866)
chr8 (19-76)||(22221409-22221466)
chr8 (19-76)||(22227751-22227808)
chr8 (3-75)||(36249552-36249624)
chr8 (9-76)||(43661858-43661925)
chr8 (1-75)||(11283236-11283310)
chr8 (10-76)||(12353396-12353461)
chr8 (9-81)||(24122877-24122948)
chr8 (9-80)||(42982692-42982763)
chr8 (7-77)||(36250889-36250959)
chr8 (18-79)||(11456634-11456695)
chr8 (9-74)||(18979155-18979220)
chr8 (21-78)||(32968453-32968510)
chr8 (9-77)||(8389724-8389792)
chr8 (19-75)||(10006344-10006400)
chr8 (9-76)||(1823551-1823618)
chr8 (9-76)||(1857996-1858063)
chr8 (9-84)||(22220379-22220454)
chr8 (9-72)||(29968372-29968434)
chr8 (1-76)||(30335638-30335713)
chr8 (21-80)||(38974790-38974849)
chr8 (21-76)||(38980091-38980146)
chr8 (21-80)||(39005888-39005947)
chr8 (21-76)||(39011188-39011243)
chr8 (22-80)||(36337621-36337679)
chr8 (28-77)||(11288914-11288963)
chr8 (27-76)||(45114569-45114618)
chr8 (90-151)||(45503749-45503810)
chr8 (9-77)||(5513980-5514047)
chr8 (9-76)||(8388463-8388528)
chr8 (19-75)||(24483143-24483199)
chr8 (1-81)||(44147200-44147280)
chr8 (18-81)||(7117360-7117423)
chr8 (94-129)||(27933372-27933407)
chr8 (21-80)||(32973983-32974042)
chr8 (1-79)||(8802396-8802474)
chr8 (22-75)||(3819489-3819541)
chr8 (9-76)||(32207360-32207425)
chr8 (19-47)||(35795245-35795273)
chr8 (9-73)||(43661267-43661331)
[»] chr4 (45 HSPs)
chr4 (9-79)||(1963192-1963262)
chr4 (1-76)||(10470545-10470620)
chr4 (19-75)||(10471433-10471489)
chr4 (19-78)||(48780245-48780304)
chr4 (19-77)||(1835147-1835205)
chr4 (9-75)||(1964476-1964542)
chr4 (9-78)||(1290233-1290302)
chr4 (9-85)||(19750610-19750685)
chr4 (9-85)||(19789121-19789196)
chr4 (23-75)||(25684934-25684986)
chr4 (9-77)||(49308062-49308129)
chr4 (9-75)||(10447006-10447073)
chr4 (19-78)||(25685867-25685926)
chr4 (27-82)||(52491660-52491715)
chr4 (18-76)||(3928902-3928960)
chr4 (9-79)||(10448295-10448365)
chr4 (9-55)||(27257995-27258041)
chr4 (19-72)||(8758882-8758935)
chr4 (9-78)||(26421657-26421725)
chr4 (9-85)||(31601020-31601095)
chr4 (9-80)||(1834114-1834185)
chr4 (9-72)||(12129626-12129689)
chr4 (22-76)||(13386580-13386635)
chr4 (27-82)||(17388264-17388318)
chr4 (9-80)||(21177992-21178062)
chr4 (9-76)||(31599788-31599855)
chr4 (9-80)||(55603566-55603636)
chr4 (19-77)||(5526171-5526228)
chr4 (90-184)||(8898705-8898799)
chr4 (27-77)||(17382991-17383040)
chr4 (1-67)||(46638752-46638817)
chr4 (19-76)||(5525359-5525415)
chr4 (27-76)||(48781098-48781147)
chr4 (19-78)||(8757672-8757730)
chr4 (19-77)||(13386012-13386071)
chr4 (22-73)||(52490468-52490519)
chr4 (26-80)||(1289092-1289146)
chr4 (21-79)||(13509406-13509463)
chr4 (9-81)||(37728600-37728671)
chr4 (19-72)||(35935578-35935631)
chr4 (27-80)||(49306770-49306822)
chr4 (18-78)||(1961171-1961231)
chr4 (19-55)||(2837159-2837195)
chr4 (1-77)||(13826418-13826493)
chr4 (9-77)||(50909271-50909338)
[»] chr5 (37 HSPs)
chr5 (1-75)||(22940649-22940723)
chr5 (9-80)||(28538671-28538742)
chr5 (19-77)||(16650900-16650958)
chr5 (19-85)||(18486947-18487013)
chr5 (9-79)||(25523065-25523135)
chr5 (179-302)||(1589702-1589823)
chr5 (9-79)||(20216798-20216868)
chr5 (3-79)||(20653816-20653892)
chr5 (19-75)||(25056426-25056482)
chr5 (13-77)||(40255711-40255775)
chr5 (9-76)||(19752911-19752977)
chr5 (19-77)||(33160331-33160389)
chr5 (18-80)||(38476724-38476786)
chr5 (19-79)||(5777897-5777955)
chr5 (3-76)||(31576592-31576664)
chr5 (9-81)||(36486523-36486595)
chr5 (27-77)||(5730439-5730490)
chr5 (28-75)||(20214196-20214242)
chr5 (22-77)||(23040287-23040342)
chr5 (9-72)||(24332916-24332979)
chr5 (10-76)||(1015483-1015549)
chr5 (9-75)||(2188965-2189030)
chr5 (1-79)||(2373375-2373453)
chr5 (19-77)||(5778881-5778939)
chr5 (10-72)||(42195137-42195197)
chr5 (9-77)||(19754165-19754234)
chr5 (18-73)||(15885132-15885187)
chr5 (22-77)||(18154492-18154547)
chr5 (9-76)||(33158097-33158164)
chr5 (9-75)||(1796054-1796120)
chr5 (28-81)||(2373141-2373194)
chr5 (18-83)||(16799917-16799982)
chr5 (19-76)||(18485137-18485194)
chr5 (19-84)||(24242008-24242073)
chr5 (153-257)||(24887242-24887347)
chr5 (27-84)||(31648240-31648297)
chr5 (9-77)||(42196235-42196303)
[»] chr2 (34 HSPs)
chr2 (9-77)||(36449776-36449844)
chr2 (27-80)||(7899935-7899988)
chr2 (9-78)||(23869570-23869638)
chr2 (9-77)||(38840528-38840596)
chr2 (27-81)||(11938841-11938895)
chr2 (1-82)||(1093173-1093253)
chr2 (9-78)||(18868921-18868990)
chr2 (9-78)||(18904364-18904433)
chr2 (19-75)||(1034514-1034570)
chr2 (9-80)||(16446149-16446220)
chr2 (9-76)||(22848190-22848257)
chr2 (27-82)||(36450974-36451028)
chr2 (22-77)||(18797244-18797300)
chr2 (27-82)||(18299366-18299421)
chr2 (9-80)||(18906022-18906093)
chr2 (226-303)||(24185014-24185090)
chr2 (9-80)||(38839237-38839308)
chr2 (19-78)||(41879257-41879316)
chr2 (19-76)||(21837300-21837355)
chr2 (18-76)||(26829332-26829390)
chr2 (28-77)||(7898689-7898738)
chr2 (8-81)||(26545555-26545628)
chr2 (28-76)||(11257621-11257669)
chr2 (9-81)||(22587989-22588060)
chr2 (22-78)||(28365509-28365565)
chr2 (9-76)||(802626-802692)
chr2 (9-76)||(32739622-32739689)
chr2 (18-72)||(13830270-13830323)
chr2 (9-74)||(18300759-18300822)
chr2 (95-184)||(24185127-24185216)
chr2 (1-82)||(30714268-30714348)
chr2 (9-76)||(11258846-11258913)
chr2 (28-76)||(13570611-13570659)
chr2 (126-190)||(35406740-35406804)
[»] scaffold2034 (1 HSPs)
scaffold2034 (9-75)||(233-299)
[»] scaffold0632 (1 HSPs)
scaffold0632 (9-85)||(3343-3418)
[»] scaffold0003 (3 HSPs)
scaffold0003 (17-77)||(49476-49536)
scaffold0003 (3-80)||(43539-43616)
scaffold0003 (27-77)||(39342-39392)
[»] scaffold0019 (2 HSPs)
scaffold0019 (9-80)||(60085-60156)
scaffold0019 (9-74)||(61494-61559)
[»] chr7 (34 HSPs)
chr7 (19-78)||(3227639-3227698)
chr7 (19-73)||(17781663-17781717)
chr7 (9-77)||(21505414-21505480)
chr7 (9-78)||(22630487-22630556)
chr7 (9-77)||(11658377-11658445)
chr7 (9-77)||(31949837-31949905)
chr7 (9-77)||(42886321-42886389)
chr7 (19-78)||(7501897-7501956)
chr7 (9-76)||(20163591-20163658)
chr7 (90-256)||(23395054-23395216)
chr7 (19-82)||(32253443-32253506)
chr7 (26-76)||(7500454-7500503)
chr7 (19-77)||(17782598-17782656)
chr7 (19-72)||(128646-128699)
chr7 (94-166)||(10234855-10234928)
chr7 (9-80)||(31659617-31659689)
chr7 (19-79)||(31949318-31949378)
chr7 (27-78)||(127334-127384)
chr7 (1-76)||(20636848-20636923)
chr7 (1-76)||(27869195-27869269)
chr7 (1-76)||(39182164-39182238)
chr7 (28-82)||(11662605-11662659)
chr7 (9-75)||(18371424-18371490)
chr7 (9-75)||(48934938-48935004)
chr7 (18-86)||(8526785-8526853)
chr7 (27-78)||(21508457-21508506)
chr7 (19-75)||(47525412-47525468)
chr7 (19-78)||(34174028-34174086)
chr7 (26-80)||(30439410-30439463)
chr7 (1-79)||(42303376-42303454)
chr7 (9-70)||(14999190-14999249)
chr7 (23-76)||(31661058-31661111)
chr7 (19-68)||(47524532-47524581)
chr7 (28-76)||(47369780-47369828)
[»] scaffold0302 (1 HSPs)
scaffold0302 (9-78)||(17467-17536)
[»] scaffold0294 (1 HSPs)
scaffold0294 (9-78)||(5473-5542)
[»] scaffold0586 (1 HSPs)
scaffold0586 (9-79)||(6339-6409)
[»] scaffold1303 (1 HSPs)
scaffold1303 (9-77)||(1437-1505)
[»] scaffold0320 (1 HSPs)
scaffold0320 (19-79)||(19484-19544)
[»] scaffold0227 (1 HSPs)
scaffold0227 (21-75)||(166-220)
[»] scaffold0321 (2 HSPs)
scaffold0321 (9-73)||(18730-18794)
scaffold0321 (8-77)||(19443-19514)
[»] scaffold0045 (1 HSPs)
scaffold0045 (27-75)||(49137-49185)
[»] scaffold0002 (2 HSPs)
scaffold0002 (19-55)||(15703-15739)
scaffold0002 (18-78)||(454926-454986)
[»] scaffold0186 (2 HSPs)
scaffold0186 (27-81)||(23075-23127)
scaffold0186 (27-79)||(23943-23995)
[»] scaffold0093 (2 HSPs)
scaffold0093 (9-74)||(2500-2564)
scaffold0093 (9-74)||(7123-7187)
[»] scaffold0059 (1 HSPs)
scaffold0059 (13-74)||(4769-4829)
[»] scaffold0690 (1 HSPs)
scaffold0690 (17-57)||(4300-4340)
[»] scaffold0369 (1 HSPs)
scaffold0369 (9-76)||(13192-13257)


Alignment Details
Target: chr1 (Bit Score: 173; Significance: 8e-93; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 76 - 302
Target Start/End: Original strand, 12788882 - 12789107
Alignment:
Q  76 taaaataaaagactgaaaggtgaagtttaatattgttatcgaatcaaatttcaactattaaacgaaggaccgagaggtgaagtttgatattggtacatat 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||| ||    
T  12788882 taaaataaaagactgaaaggtgaagtttaatattgttatcgaatcaaatttcaaatatcaaacgaaggaccgagaggtgaagtttgatattgatacaaat 12788981  T
Q  176 gagattagagaagtctctcaaaaaatctataaagatacttttgattgcatttgggacaataatgttgtgctcaaagggtctctcaatgataatcaa-ctt 274  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||  |||||||||||||||| |||    
T  12788982 gagattagagaagtctgtcaaaatatctataaagatacttttgattggatttgggacaataatgtagtgctcaaaggg--tctcaatgataatcaacctt 12789079  T
Q  275 gagaatatgcatgattattgttgagata 302  Q
    ||||||| ||||||||||||||||||||    
T  12789080 gagaataggcatgattattgttgagata 12789107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 431 - 502
Target Start/End: Original strand, 12796652 - 12796723
Alignment:
Q  431 aaaattcccttctgttttactctaacaatttcaagaaaaattataagtggaacaaacttgtttaccaaatac 502  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12796652 aaaatttccttatgttttactctaacaatttcaagaaaaattataagtggaacaaacttctttaccaaatac 12796723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 24422866 - 24422795
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  24422866 tttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggtaaaagtgcactttagcctaaaa 24422795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 51684432 - 51684366
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||| || |||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  51684432 tttttatacatagggggccaaaattgcaactttttaaaagttaaggggggaaaagtgcactttagcc 51684366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 12390015 - 12390084
Alignment:
Q  8 atttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||||  |||||| ||||||||||||||    
T  12390015 atttttgtacataggggatcaaaatcgcaactttttgaaagttaaggagggaaaaatgcactttagccta 12390084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 52827403 - 52827346
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  52827403 tagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcct 52827346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 35067037 - 35067105
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    |||||||  |||||||| |||||| |||||||||||||| ||||||| |||||||||||||||||||||    
T  35067037 tttttgttcatagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcactttagccta 35067105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 51685800 - 51685872
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaat 81  Q
    |||||||| |||| ||| |||||| ||||||||||||||||||  || |||||||||||||||||||||||||    
T  51685800 tttttgtacatagagggccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagcctaaaat 51685872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 41364894 - 41364820
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaa 84  Q
    |||| |||| ||||||| ||||||||||| ||||||||||||| |||| |||||||||||||||||| ||||||||    
T  41364894 ttttggtatttagggggccaaaattgcaagtttttgaaagttagggga-gaaaagtgcactttagccaaaaataaa 41364820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 52275034 - 52274967
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||  ||||||||||||||||||| ||||||||||||| ||| | ||||||||||||||||||    
T  52275034 tttttgtacttagggggtcaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcct 52274967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 11437252 - 11437310
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaaa 85  Q
    ||||||||||| ||||||||||||||||| | |||||||||||||||||||||| ||||    
T  11437252 caaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcctaaaaaaaaa 11437310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 28553573 - 28553667
Alignment:
Q  90 gaaaggtgaagtttaatattgttatcgaatcaaatttcaactattaaacgaaggaccgagaggtgaagtttgatattggtacatatgagattaga 184  Q
    |||||||||||||| ||||||||||   |||| || |||| ||| |||||||||||||| ||||||||||||||||||   || |||||||||||    
T  28553573 gaaaggtgaagtttgatattgttatttcatcatatctcaaatatcaaacgaaggaccgaaaggtgaagtttgatattgaatcaaatgagattaga 28553667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 35594270 - 35594216
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  35594270 ggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 35594216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 11190451 - 11190382
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    |||||||||||||||   ||||||||||||||||| ||| |||||||  |||||||||||||||||||||    
T  11190451 tttttgtatatagggaaccaaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagcctaa 11190382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 303 - 343
Target Start/End: Original strand, 12796318 - 12796358
Alignment:
Q  303 tttagttagtggagtcattttgtttagttggttttatctct 343  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12796318 tttagttagtggagtcattttgtttagttggttttatctct 12796358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 14999350 - 14999283
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||  ||||||||||||||||||| |||||||||||| |||| |||||||| ||||||||||||    
T  14999350 tttttgtacttagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaagtacactttagccta 14999283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 11436090 - 11436041
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  11436090 caaaattgcaagtttttgaaagttaaagggggaaaagtgcactttagcct 11436041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 36612901 - 36612852
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||||||||    
T  36612901 caaaattgcaaatttttgaaagttaaggggggaaaaatgcactttagcct 36612852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 39699812 - 39699872
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||||||||||||||||| || ||||||||| |||| ||||||||||||||||||| ||||    
T  39699812 tagggggtcaaaattgcaagttattgaaagtt-aggggggaaaagtgcactttagccaaaaa 39699872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 45148637 - 45148581
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||| ||||||||||| ||||||||||||||| | | |||||||||||||||||    
T  45148637 tagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcactttagcc 45148581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 45150006 - 45150077
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaat 81  Q
    ||||||||  || |||| ||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||    
T  45150006 tttttgtacttaaggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttaacctaaaat 45150077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 39153151 - 39153214
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcacttta 72  Q
    |||||||| ||| |||| ||||||||||| ||||||||| ||||||| | ||||||||||||||    
T  39153151 tttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 39153214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 43378740 - 43378810
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcacttta 72  Q
    |||||| |||||||||  |||||| ||||||||| || ||||||||||||||| || |||||||||||||||    
T  43378740 aattgtaatttttgtacttaggggatcaaaattgtaagtttttgaaagttaagaga-gaaaagtgcacttta 43378810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 45156115 - 45156052
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcacttta 72  Q
    |||||||| ||||  ||||||||||| || ||||||||| ||||||||||||||||| ||||||    
T  45156115 tttttgtacatagaaggtcaaaattgtaagtttttgaaacttaagggaggaaaagtgaacttta 45156052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 45157244 - 45157310
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||||| |||||||| ||||||||||| ||||||||| || |||| || |||||||||||||||||    
T  45157244 tttttgtacatagggggccaaaattgcaagtttttgaaactt-agggggggaaagtgcactttagcct 45157310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 36613939 - 36614005
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||||  ||||||| ||||||| ||| ||||| ||||||| |||||||||| ||||||||||||    
T  36613939 tttttgtacttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcactttagcc 36614005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 2260629 - 2260682
Alignment:
Q  26 tcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    ||||||| |||||||||| ||| |||||||| ||||||||||||||||| ||||    
T  2260629 tcaaaatcgcaactttttaaaacttaagggatgaaaagtgcactttagcttaaa 2260682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 23980501 - 23980570
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||||  ||||| | ||||||||||| ||||| |||||||  || ||||||||||||||||||||||    
T  23980501 tttttgtacttagggagccaaaattgcaagttttttaaagttagagggggaaaagtgcactttagcctaa 23980570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 35595227 - 35595304
Alignment:
Q  9 tttttgtatatagggggtcaaaattgc-aactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaaa 85  Q
    ||||| || |||||||||||||||||| || ||||| |||||||  || |||||||| |||||||||||||| |||||    
T  35595227 tttttatacatagggggtcaaaattgctaagttttttaaagttagagggggaaaagtacactttagcctaaattaaaa 35595304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 37526930 - 37526975
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcacttta 72  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||||    
T  37526930 caaaattgcaagtttttgaaagttaaggggggaaaagtacacttta 37526975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 39222518 - 39222575
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagtt-aagggaggaaaagtgcactttagcc 75  Q
    ||||||| ||||||||||| |||||||||||| ||||| | |||||||||||||||||    
T  39222518 tagggggccaaaattgcaagtttttgaaagttaaagggggtaaaagtgcactttagcc 39222575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 39698619 - 39698562
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||| |||||||| || ||||| ||||||||||| || |||||||||||||||||    
T  39698619 tagggggccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagcct 39698562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 43060041 - 43060113
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaat 81  Q
    ||||||||  || |||||||||||| ||| |||||||||||||  || || ||||| ||||||||||||||||    
T  43060041 tttttgtacttaaggggtcaaaatttcaaatttttgaaagttagagggggtaaagtacactttagcctaaaat 43060113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 50681657 - 50681705
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||||||| ||||||||| ||||| | |||||||||||||||||||    
T  50681657 caaaattgcaagtttttgaaaattaagaggggaaaagtgcactttagcc 50681705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 7983106 - 7983048
Alignment:
Q  18 atagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    |||||||| ||||||||||| || |||||||||| |||| ||||||||||||||| ||||    
T  7983106 atagggggccaaaattgcaagttgttgaaagttacggga-gaaaagtgcactttaaccta 7983048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 402
Target Start/End: Original strand, 12796382 - 12796417
Alignment:
Q  367 ttgagggaatctctctgtaaggctatattaaatagc 402  Q
    |||||||||||||||||||| |||||||||||||||    
T  12796382 ttgagggaatctctctgtaaagctatattaaatagc 12796417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 24426110 - 24426173
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcacttta 72  Q
    ||||||||  ||||||| ||||||||||| |||||||||||||  || || |||||||||||||    
T  24426110 tttttgtacttagggggccaaaattgcaagtttttgaaagttagaggggggaaagtgcacttta 24426173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 46066589 - 46066525
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    |||||||| ||| ||||  ||||| ||||||||||||||||||  ||||||||||||||||| ||||    
T  46066589 tttttgtacataaggggctaaaatcgcaactttttgaaagtta--ggaggaaaagtgcacttaagcc 46066525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 50680387 - 50680330
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||| ||||||||||| |||||| |||||||||| |||||| ||||||||| ||||    
T  50680387 tagggggccaaaattgcaagtttttggaagttaaggg-ggaaaaatgcactttaaccta 50680330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 29182058 - 29182001
Alignment:
Q  18 atagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    |||||||| ||||||| ||||||||||||| |||| ||  ||||||| ||||||||||    
T  29182058 atagggggccaaaattacaactttttgaaacttaaagggtgaaaagtacactttagcc 29182001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 33088666 - 33088719
Alignment:
Q  23 gggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||||||||| |||||||| ||||  |  ||||||||||||||||||||    
T  33088666 gggtcaaaattgcaagtttttgaatgttagagagggaaaagtgcactttagcct 33088719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 48471937 - 48471864
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagc 74  Q
    ||||| ||||||| |  |||||||| |||||| ||||| ||||||||  || |||| |||||||||||||||||    
T  48471937 aattgccattttttttaatagggggccaaaatcgcaacattttgaaacataggggacgaaaagtgcactttagc 48471864  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 52828123 - 52828176
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||||||||| ||||||||| |||  || |||||||||||||||| |||||||    
T  52828123 caaaattgcaagtttttgaaaattagagggggaaaagtgcactttaacctaaaa 52828176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 16281317 - 16281349
Alignment:
Q  21 gggggtcaaaattgcaactttttgaaagttaag 53  Q
    ||||||||||||||||||| |||||||||||||    
T  16281317 gggggtcaaaattgcaactatttgaaagttaag 16281349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 21185249 - 21185201
Alignment:
Q  34 gcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaata 82  Q
    |||||||||| ||| |||||||| ||||| |||||||||||||| ||||    
T  21185249 gcaactttttaaaacttaagggatgaaaaatgcactttagcctataata 21185201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 24491211 - 24491155
Alignment:
Q  20 agggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||||||| ||||||||||||||  |||||||  ||||||||| || |||||    
T  24491211 agggggtcaaaatcgcaactttttgaaacataagggataaaaagtgcatttaagcct 24491155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 39221405 - 39221357
Alignment:
Q  29 aaattgcaactttttgaaagtta-agggaggaaaagtgcactttagcct 76  Q
    ||||||||| ||||||||||||| |||| ||||||||||| ||||||||    
T  39221405 aaattgcaagtttttgaaagttagaggggggaaaagtgcaatttagcct 39221357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 41366184 - 41366232
Alignment:
Q  28 aaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||||||  ||||||||||||| | | ||||||||||||||||||||    
T  41366184 aaaattgcatgtttttgaaagttaggaggggaaaagtgcactttagcct 41366232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 43058851 - 43058784
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||  ||||||||||||||||||| ||||| |||||| |||| | ||||||| |||||| ||||    
T  43058851 tttttgtacttagggggtcaaaattgcaagtttttcaaagtt-agggggaaaaagtgtactttaaccta 43058784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 375 - 442
Target Start/End: Original strand, 27442882 - 27442949
Alignment:
Q  375 atctctctgtaaggctatattaaatagctactcttttgcagttgaataatacagataaaattcccttc 442  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27442882 atctatctgtaaggctatattaaatagctactcttttgcacttgaataatacagataaaattcccttc 27442949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 51038825 - 51038893
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    |||||||  |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  51038825 tttttgttcatagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagccta 51038893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 375 - 442
Target Start/End: Original strand, 27446038 - 27446105
Alignment:
Q  375 atctctctgtaaggctatattaaatagctactcttttgcagttgaataatacagataaaattcccttc 442  Q
    |||| ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||    
T  27446038 atctatctgtaaggctatattaaatagcttatcttttgcacttgaataatacagataaaattcccttc 27446105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 54539821 - 54539754
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||| |||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  54539821 tttttgtatttagggggttaaaattgcaagtttttgaaagttaagggtggaaaagtgcactttagcct 54539754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 7758468 - 7758398
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||    
T  7758468 tttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggggaaaaagtgcactttagcctaaa 7758398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 22776847 - 22776915
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    |||||||| |||||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  22776847 tttttgtacatagggggccaaaattgcaactttctgaaagttaggggtggaaaagtgcactttagccta 22776915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 47615593 - 47615653
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  47615593 tagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctaaa 47615653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 47609753 - 47609690
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaata 82  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||||||| ||||||||||||||    
T  47609753 tagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcattttagcctaaaata 47609690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 49216313 - 49216242
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    |||||||| |||||||||||||||||||||||||||||| ||| | | ||||||||||||||||||| ||||    
T  49216313 tttttgtacatagggggtcaaaattgcaactttttgaaacttaggcgtggaaaagtgcactttagccaaaaa 49216242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 54540825 - 54540892
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||  || |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  54540825 tttttgtacttaaggggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 54540892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 51037601 - 51037536
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    |||||||  |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  51037601 tttttgttcatagagggtcaaaattgcaactttttgaaagttaaggga-gaaaagtgcactttagcc 51037536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 19984915 - 19984847
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    |||||||| |||||||| ||||||||||| ||||||||| ||| ||| |||||||||||||||||||||    
T  19984915 tttttgtacatagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagccta 19984847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 351
Target Start/End: Original strand, 27442847 - 27442895
Alignment:
Q  303 tttagttagtggagtcattttgtttagttggttttatctctctgtaagg 351  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27442847 tttagttagtggagtcattttgtttagttggttttatctatctgtaagg 27442895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 351
Target Start/End: Original strand, 27446003 - 27446051
Alignment:
Q  303 tttagttagtggagtcattttgtttagttggttttatctctctgtaagg 351  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27446003 tttagttagtggagtcattttgtttagttggttttatctatctgtaagg 27446051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 29931292 - 29931224
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||| |||||||  |||||||||| ||||||||||||| ||| |||||||||||||||||||||    
T  29931292 tttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagccta 29931224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 29980446 - 29980378
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||| |||||||  |||||||||| ||||||||||||| ||| |||||||||||||||||||||    
T  29980446 tttttgtatttagggggcaaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagccta 29980378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 7267699 - 7267639
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||| |||||||    
T  7267699 tagggggccaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcactttaacctaaaa 7267639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 53614866 - 53614813
Alignment:
Q  28 aaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaat 81  Q
    ||||||| || |||||||||||||||||||||||| ||||||||||||||||||    
T  53614866 aaaattgtaagtttttgaaagttaagggaggaaaaatgcactttagcctaaaat 53614813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 12700239 - 12700166
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaa 84  Q
    ||||||||  ||||||| ||||||||||| |||||||||||||  || || |||||||||||||||||||||||||    
T  12700239 tttttgtacttagggggccaaaattgcaagtttttgaaagtta--ggggggaaagtgcactttagcctaaaataaa 12700166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 40426805 - 40426877
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaatt-gcaactttttgaaagttaagggaggaaaagtgcacttta 72  Q
    |||||| ||||||||||||| |||| | ||||| |||||||||| ||||||||||| ||||||||||||||||    
T  40426805 aattgtaatttttgtatataaggggccgaaatttgcaacttttttaaagttaaggggggaaaagtgcacttta 40426877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 8890696 - 8890787
Alignment:
Q  93 aggtgaagtttaatattgttatcgaatcaaatttcaactattaaacgaaggaccgagaggtgaagtttgatattggtacatatgagattaga 184  Q
    ||||||||||| ||||||||||  | ||| || |||| ||| |||||||| ||||||| ||||||||||||||||| ||| || ||||||||    
T  8890696 aggtgaagtttgatattgttatatactcatatctcaaatatcaaacgaagaaccgagaagtgaagtttgatattggaacaaattagattaga 8890787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 12881564 - 12881639
Alignment:
Q  93 aggtgaagtttaatattgttatcgaatcaaatttcaactattaaacgaaggaccgagaggtgaagtttgatattgg 168  Q
    ||||||| ||| ||||||||||  ||||| || |||| ||| |||||||| |||||||||||||||||||||||||    
T  12881564 aggtgaaattttatattgttatttaatcatatctcaaatatcaaacgaagaaccgagaggtgaagtttgatattgg 12881639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 46721255 - 46721322
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||||| ||||||||| ||||| |||||||||| ||||||| |||  |||||||||||||||||||    
T  46721255 tttttgtacatagggggttaaaatcgcaactttttaaaagttagggggagaaaagtgcactttagcct 46721322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 5001256 - 5001198
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||| |||||||||||  ||||||||| || |||||||||||||||||||||||||    
T  5001256 tagggggccaaaattgcaagattttgaaagataggggaggaaaagtgcactttagccta 5001198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 46720007 - 46719941
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||| || |||||||| |||||| |||||||||| ||||||||||| |||||| ||||||||||||    
T  46720007 tttttatacatagggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcactttagcc 46719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 534565 - 534496
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    |||||||| ||||| |||||||||||||| ||||||| |||||  || | ||||||||||||||||||||    
T  534565 tttttgtacataggaggtcaaaattgcaagtttttgagagttagaggggaaaaagtgcactttagcctaa 534496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 23769904 - 23769855
Alignment:
Q  28 aaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||||||| |||||||||||||| |||||||||||||| ||||||    
T  23769904 aaaattgcaacttgttgaaagttaagggtggaaaagtgcacttcagccta 23769855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 184
Target Start/End: Complemental strand, 31139312 - 31139223
Alignment:
Q  95 gtgaagtttaatattgttatcgaatcaaatttcaactattaaacgaaggaccgagaggtgaagtttgatattggtacatatgagattaga 184  Q
    ||||| ||| ||||||||||  ||||| || |||  ||| |||||||| |||||||||||||||||||||||||  || |||||||||||    
T  31139312 gtgaactttgatattgttatttaatcatatctcatatatcaaacgaagaaccgagaggtgaagtttgatattggatcaaatgagattaga 31139223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 8875972 - 8875896
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaaa 85  Q
    |||||||| ||| ||||  ||||||||| ||||||  || |||||||  ||||||||||||||||||||||||||||    
T  8875972 tttttgtacataaggggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcactttagcctaaaataaaa 8875896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 52840657 - 52840705
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  52840657 caaaattgcaagtttttgaaagttaggggaggaaaagggcactttagcc 52840705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 19986120 - 19986175
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    |||| ||||||||||| ||||||||| ||||| | |||||||||||||||||||||    
T  19986120 ggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgcactttagccta 19986175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 34019190 - 34019250
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaat 81  Q
    ||||||||||||||||||| ||||||||||||||||  |||||| || |||||| ||||||||    
T  34019190 tagggggtcaaaattgcaagtttttgaaagttaagg--ggaaaaatgtactttaccctaaaat 34019250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 20488001 - 20487939
Alignment:
Q  106 tattgttatcgaatcaaatttcaactattaaacgaaggaccgagaggtgaagtttgatattgg 168  Q
    |||||||||  ||||| ||||||| ||| |||| ||| |||||||||||||||||||||||||    
T  20488001 tattgttattcaatcatatttcaaatatcaaacaaagtaccgagaggtgaagtttgatattgg 20487939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 29932746 - 29932800
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||| ||||||||||| |||||||||||||  || ||||||||||||||||||||    
T  29932746 ggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 29932800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 29981900 - 29981954
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||| ||||||||||| |||||||||||||  || ||||||||||||||||||||    
T  29981900 ggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 29981954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 47610625 - 47610683
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||| ||||||||||| |||||||||||||  || |||||||||||||||| ||||    
T  47610625 tagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttaaccta 47610683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 535835 - 535888
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||||||||| ||||||||||||| ||| |||||||| |||||||||| ||||    
T  535835 caaaattgcaagtttttgaaagttaggggtggaaaagtacactttagccaaaaa 535888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 28263158 - 28263219
Alignment:
Q  21 gggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaata 82  Q
    ||||| |||||| ||||| |||| ||||||| ||| ||||||||||||||||||||| ||||    
T  28263158 gggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcactttagcctacaata 28263219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 52281594 - 52281651
Alignment:
Q  21 gggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||| |||||| ||||| ||||||||| || ||| ||||||||||||||||||||||    
T  52281594 gggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagcctaa 52281651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 28262246 - 28262191
Alignment:
Q  21 gggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||| |||||| ||||| |||||||||||| ||| |||||||||||||||||||||    
T  28262246 gggggccaaaatcgcaacgttttgaaagttagggg-ggaaaagtgcactttagccta 28262191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 47614241 - 47614185
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||| ||||||||||| |||||||||||||  || | |||||||||||||||||    
T  47614241 tagggggccaaaattgcaagtttttgaaagttagaggggaaaaagtgcactttagcc 47614185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 51347342 - 51347266
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    |||||||||||||||  |||| ||  ||||||||||||||||| ||| ||||| | || ||||||||||||| ||||    
T  51347342 aattgtcatttttgttcatagaggaccaaaattgcaactttttcaaacttaagagggggaaagtgcactttaaccta 51347266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 51470028 - 51469972
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||| ||||||||||| ||||||||| ||| ||  |||||||||||||||||||    
T  51470028 tagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagcc 51469972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 77
Target Start/End: Complemental strand, 52276358 - 52276302
Alignment:
Q  21 gggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||| |||||| ||||| ||||||||| || ||| |||||||||||||||||||||    
T  52276358 gggggccaaaatcgcaacgttttgaaagatagggggggaaaagtgcactttagccta 52276302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 22775829 - 22775783
Alignment:
Q  21 gggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcac 68  Q
    ||||| |||||||||||||||||||||||| |||| ||||||||||||    
T  22775829 gggggccaaaattgcaactttttgaaagtt-aggggggaaaagtgcac 22775783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 39844232 - 39844303
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||| || ||| ||||| |||||||||||||||| ||| ||||||| | ||| |||||||||| |||||||    
T  39844232 tttttttacataaggggttaaaattgcaactttttaaaacttaagggggaaaaggtgcactttaacctaaaa 39844303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 51470500 - 51470558
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    |||||| || ||||||||| |||||||||||| |||| |||| |||||||||||||||||    
T  51470500 taggggatctaaattgcaagtttttgaaagtt-aggggggaagagtgcactttagcctaa 51470558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 55192030 - 55192096
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||  ||| ||| ||||||||||| ||||||||||||||||| |||||| | |||||||||||    
T  55192030 tttttgtacttagagggccaaaattgcaagtttttgaaagttaaggggggaaaa-tacactttagcct 55192096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 4864098 - 4864144
Alignment:
Q  135 aaacgaaggaccgagaggtgaagtttgatattggtacatatgagatt 181  Q
    |||||||||||||||||||||| ||||||||||| | | ||||||||    
T  4864098 aaacgaaggaccgagaggtgaaatttgatattggaataaatgagatt 4864144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 7268880 - 7268929
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||| ||||    
T  7268880 caaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttaaccta 7268929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 8339014 - 8338940
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||| ||||||| |  ||||||||||||||| ||||| ||||||||  || |||  ||||||||||||||||||    
T  8339014 aattgccattttttttaatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 8338940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 8542667 - 8542609
Alignment:
Q  18 atagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||||||||||||||| |||||||| |||  ||| |||||||| | ||||||||    
T  8542667 atagggggtcaaaattgcaacattttgaaacttagaggacgaaaagtgaagtttagcct 8542609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 5029736 - 5029788
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    |||||||||||  ||||||||| || ||| ||||||||||||||||||||||||    
T  5029736 caaaattgcaagattttgaaagatagggg-ggaaaagtgcactttagcctaaaa 5029788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6170346 - 6170281
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgc 66  Q
    |||||| |||||||||  || ||| |||||||||||| ||||||||||||| ||| | ||||||||    
T  6170346 aattgtaatttttgtacttaagggatcaaaattgcaagtttttgaaagttatgggtgaaaaagtgc 6170281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 8456543 - 8456479
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagc 74  Q
    ||||||||| ||||||  ||||||||||| ||||||||| || |||| | ||||||||||||||||    
T  8456543 tttttgtatttaggggaccaaaattgcaagtttttgaaaatt-agggggaaaaagtgcactttagc 8456479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 11671376 - 11671444
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||| ||| |||||||  |||||||||| |||||||||||| |||  | ||||||||||||||||||||    
T  11671376 tttttatatttagggggctaaaattgcaagtttttgaaagtt-aggcggaaaaagtgcactttagcctaa 11671444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 12703535 - 12703601
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagtta-agggaggaaaagtgcactttagcct 76  Q
    ||||||||  ||||||| ||||||| ||| ||||||||||||| |||||  ||||||||||||||||||    
T  12703535 tttttgtacttagggggccaaaattacaaatttttgaaagttagaggga--aaaagtgcactttagcct 12703601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 39843123 - 39843054
Alignment:
Q  3 ttgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcacttta 72  Q
    ||||||||| | || |||||||   |||||||||||||||| ||| ||||||| | ||||||||||||||    
T  39843123 ttgtcatttctttacataggggactaaaattgcaactttttcaaacttaagggggaaaaagtgcacttta 39843054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 53616070 - 53616123
Alignment:
Q  28 aaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaat 81  Q
    |||||| ||| | ||| |||||||||||||||||||||||||||| | ||||||    
T  53616070 aaaattacaagtgtttaaaagttaagggaggaaaagtgcactttatcttaaaat 53616123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 18456110 - 18456174
Alignment:
Q  21 gggggtcaaaattgcaactttttgaaagttaagggagg-aaaagtgcactttagcctaaaataaa 84  Q
    ||||| |||||| ||||| |||||||||||| ||| || ||||||||||||||||| ||| ||||    
T  18456110 gggggccaaaatcgcaacgttttgaaagttaggggggggaaaagtgcactttagccaaaattaaa 18456174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 25336406 - 25336358
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    |||||||||||| |||||||| |||||||  |||||||||| |||||||    
T  25336406 caaaattgcaacattttgaaatttaaggggcgaaaagtgcagtttagcc 25336358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 9e-25; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 16704532 - 16704602
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16704532 tttttgtacttagggggtcaaaattgcaagtttttgaaagttaagggaggaaaagtgcactttagcctaaa 16704602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 7316339 - 7316397
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  7316339 tagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 7316397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 27437886 - 27437826
Alignment:
Q  17 tatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  27437886 tatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagccta 27437826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 6842318 - 6842389
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    |||||| | |||||||| ||||||||||||||||||||| |||  || ||||||||||||||||||||||||    
T  6842318 tttttgcacatagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagcctaaaa 6842389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 3721668 - 3721611
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||||||||||||| |||||||||||||  || ||||||||||||||||||||    
T  3721668 tagggggtcaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcct 3721611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 3722556 - 3722613
Alignment:
Q  23 gggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||||||||||||| ||||||||||||| ||  ||||||||||||||||||||||||    
T  3722556 gggtcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttagcctaaaa 3722613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 30495725 - 30495803
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaat 81  Q
    |||||| ||||||||| ||||||| | ||||| |||||||||||||||||| ||||  ||||||||||||||||| |||||    
T  30495725 aattgttatttttgtacataggggattaaaatcgcaactttttgaaagttagggga--aaaagtgcactttagccaaaaat 30495803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 8821929 - 8821869
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    ||||||| ||||||||||| |||||||||||||  || |||||||||||||||||||||||    
T  8821929 tagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctaaa 8821869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 8822838 - 8822894
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||||||||||||||| |||||||||||||| |  |||||||||||||||||||    
T  8822838 tagggggtcaaaattgcaagtttttgaaagttaaagagggaaaagtgcactttagcc 8822894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 8659321 - 8659262
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||| ||||||||||| |||||||||||||  || ||||||||||||||||||||||    
T  8659321 tagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctaa 8659262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 10784649 - 10784590
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaaggga-ggaaaagtgcactttagccta 77  Q
    |||||||| |||||||||| ||||| |||||||||||| |||||||||||||||||||||    
T  10784649 tagggggttaaaattgcaagtttttaaaagttaagggagggaaaagtgcactttagccta 10784590  T

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Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 8660251 - 8660305
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||||||||||||| ||||||||||||| | | ||||||||||||||||||||    
T  8660251 ggggtcaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcct 8660305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 31817684 - 31817622
Alignment:
Q  126 tcaactattaaacgaaggaccgagaggtgaagtttgatattggtacatatgagattagagaag 188  Q
    |||| ||| |||||||||||||| ||||||||||||||||| | ||| |||||||||||||||    
T  31817684 tcaaatatcaaacgaaggaccgaaaggtgaagtttgatattagaacaaatgagattagagaag 31817622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 32451973 - 32452039
Alignment:
Q  18 atagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaa 84  Q
    ||||||||||||||||||||| ||||||||  || ||||  ||||||||| ||||||||||||||||    
T  32451973 atagggggtcaaaattgcaacattttgaaacataggggacaaaaagtgcagtttagcctaaaataaa 32452039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 26574685 - 26574608
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaaag 86  Q
    ||||||||  ||| || |||||||||||| |||||||||||||  || || ||| |||||||||||||||||||||||    
T  26574685 tttttgtacttagaggttcaaaattgcaagtttttgaaagttagaggtgggaaattgcactttagcctaaaataaaag 26574608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 27443822 - 27443745
Alignment:
Q  3 ttgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||||||||  || ||| | |||||||||||||||||||||||| ||||||| | |||| ||||||| |||||||||    
T  27443822 ttgtcattttattaaataagaggtcaaaattgcaactttttgaaacttaagggggaaaaactgcacttaagcctaaaa 27443745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 16415581 - 16415637
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||||||| |||||||||| ||| |||||||  |||||||||||||||||||||    
T  16415581 ggggtcaaaatcgcaactttttaaaatttaaggggtgaaaagtgcactttagcctaa 16415637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 26717132 - 26717183
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttag 73  Q
    |||||||||||||||| ||| ||||| ||||||| |||||||||||||||||    
T  26717132 ggggtcaaaattgcaagtttctgaaacttaaggggggaaaagtgcactttag 26717183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 7314933 - 7314875
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    |||| ||||||||||| |||||||||||||  || ||||||||||||||||||| ||||    
T  7314933 ggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccaaaaa 7314875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 14822413 - 14822355
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    |||| ||||||||||| ||||||||| |||||||  |||||||||||| ||||||||||    
T  14822413 ggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcactctagcctaaaa 14822355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Original strand, 27447966 - 27448016
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    |||||||| |||||||| ||| ||||||| |||||||||||||||||||||    
T  27447966 caaaattgtaactttttaaaacttaaggggggaaaagtgcactttagccta 27448016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29473151 - 29473082
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactt 70  Q
    |||||| ||||||||  ||||||   ||||||||||||||||| ||| ||||||| ||||||||||||||    
T  29473151 aattgttatttttgttcatagggaaccaaaattgcaactttttaaaacttaaggggggaaaagtgcactt 29473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 13345603 - 13345549
Alignment:
Q  23 gggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    |||||||||| ||||||||| |||| ||||||| ||||||||| ||||||||||||    
T  13345603 gggtcaaaatcgcaacttttggaaacttaaggg-ggaaaagtgaactttagcctaa 13345549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 34834631 - 34834682
Alignment:
Q  26 tcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    |||||||||||| ||||||||||||| ||  |||||||||||||||| ||||    
T  34834631 tcaaaattgcaagtttttgaaagttagggagggaaaagtgcactttaaccta 34834682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 6840258 - 6840191
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||||| || |||| |||||| |||||||||||||| ||||||  || ||||||||||| |||||||    
T  6840258 tttttgtatttaaggggccaaaatcgcaactttttgaaacttaagg--gggaaagtgcacttcagcctaa 6840191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 12382756 - 12382822
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaaa 85  Q
    ||||||||||||||| ||| ||||| ||| |||  || ||||||||||||||||||  |||||||||    
T  12382756 tagggggtcaaaattacaaatttttaaaaattagaggtggaaaagtgcactttagctaaaaataaaa 12382822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 15907914 - 15907972
Alignment:
Q  17 tatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||| ||| |||||| |||||||||||||| |||| |||| ||| |||||||||||||    
T  15907914 tatagagggacaaaatcgcaactttttgaaacttaacggagaaaaggtgcactttagcc 15907972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 20973343 - 20973401
Alignment:
Q  18 atagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||| || ||||| ||||||| |||||| |||| || ||||||||||||||||||||    
T  20973343 atagggtgttaaaatcgcaacttattgaaacttaaagggggaaaagtgcactttagcct 20973401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 27322113 - 27322170
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||| |||||||||||  ||||||||| || ||| |||||||||||||||||||||    
T  27322113 tagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcactttagccta 27322170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 1829648 - 1829701
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcacttta 72  Q
    ||||||||||||||||||| ||||| ||||||| |||   ||||||||||||||    
T  1829648 tagggggtcaaaattgcaagtttttaaaagttagggggaaaaaagtgcacttta 1829701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 22968404 - 22968460
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    |||| |||||| ||||| |||||||| |||||||  |||||||| ||||||||||||    
T  22968404 ggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtgaactttagcctaa 22968460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 23819989 - 23819933
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    |||| |||||| ||||| |||||||| |||||||  |||||||| ||||||||||||    
T  23819989 ggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtgaactttagcctaa 23819933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11282082 - 11282006
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| | |||||||||||||| ||||    
T  11282082 aattgtcatttttgtatatagggggccaaaattgcaactttttaaaagttaagggggaaaaagtgcactttaaccta 11282006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 159 - 272
Target Start/End: Complemental strand, 45503697 - 45503586
Alignment:
Q  159 ttgatattggtacatatgagattagagaagtctctcaaaaaatctataaagatacttttgattgcatttgggacaataatgttgtgctcaaagggtctct 258  Q
    |||||||||  ||| ||||||||||| ||||||||||||||||||| ||| |||  ||||||||| ||||| ||||||| |||||||| ||||||  |||    
T  45503697 ttgatattgaaacaaatgagattagacaagtctctcaaaaaatctacaaatataggtttgattgcttttggaacaataaagttgtgctaaaaggg--tct 45503600  T
Q  259 caatgataatcaac 272  Q
    ||||||||||||||    
T  45503599 caatgataatcaac 45503586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 12351987 - 12351911
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaaa 85  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||| || ||| ||||||||||||| ||||||||    
T  12351987 tttttgtacttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttagccttaaataaaa 12351911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 29043464 - 29043388
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaaa 85  Q
    |||||||| ||||||||||||||| || |||||||||| |||||||||||||||||| ||||||| ||||| |||||    
T  29043464 tttttgtacatagggggtcaaaatcgcgactttttgaaggttaagggaggaaaagtgaactttaggctaaattaaaa 29043388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 10007808 - 10007866
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  10007808 tagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 10007866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 22221409 - 22221466
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  22221409 tagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 22221466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 22227751 - 22227808
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  22227751 tagggggtcaaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcct 22227808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 36249624 - 36249552
Alignment:
Q  3 ttgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||||||| |  ||||| || ||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  36249624 ttgtcatttttattcataggaggccaaaattgcaactttttgaaacttaaggggggaaaagtgcactttagcc 36249552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 43661858 - 43661925
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||||| |||| || | |||||||||||||||||||||||||||| |||||||||||||| |||||    
T  43661858 tttttgtacatagaggattaaaattgcaactttttgaaagttaagggtggaaaagtgcacttcagcct 43661925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 11283236 - 11283310
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||||||||| || ||||||||  |||||| ||||||||||||||||||||| || ||| ||||||||||||    
T  11283236 aattgtcatttttatacatagggggctaaaattacaactttttgaaagttaagggggggaaaatgcactttagcc 11283310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 12353396 - 12353461
Alignment:
Q  10 ttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||||  ||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  12353396 ttttgtacttagggggccaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcactttagcct 12353461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 81
Target Start/End: Complemental strand, 24122948 - 24122877
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaat 81  Q
    ||||||||  ||||||||||||||||||| ||||| |||||| |||| |||||| ||||||||||||||||||    
T  24122948 tttttgtacttagggggtcaaaattgcaaattttttaaagtt-aggggggaaaaatgcactttagcctaaaat 24122877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 42982692 - 42982763
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||||| || |||||| ||||||| ||||||||| ||| |||| || ||||||||||||||||||||||||    
T  42982692 tttttgtttacagggggccaaaattacaactttttaaaacttaaaggtggaaaagtgcactttagcctaaaa 42982763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 36250889 - 36250959
Alignment:
Q  7 catttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||| | |||||| |||||||||| ||||||||| ||| ||||||||| ||||||| |||||||||||    
T  36250889 catttttatttataggaggtcaaaattacaactttttaaaacttaagggagaaaaagtgtactttagccta 36250959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 11456695 - 11456634
Alignment:
Q  18 atagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    |||||||| ||||||||||| ||||||||| ||| |||  ||||||||||||||||||||||    
T  11456695 atagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcactttagcctaaa 11456634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 18979155 - 18979220
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagc 74  Q
    ||||| ||| ||||||| ||||||||||| || |||||||||| ||| ||||||||||||||||||    
T  18979155 tttttatatttagggggccaaaattgcaagttgttgaaagttagggggggaaaagtgcactttagc 18979220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 32968510 - 32968453
Alignment:
Q  21 gggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||| |||||| ||||| |||||||||||| ||| ||||||||||||||||||||||    
T  32968510 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcctaa 32968453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 8389724 - 8389792
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    |||||||| ||| |||  ||||||||||||||||||||| ||||| | |||||||||||||||| ||||    
T  8389724 tttttgtacataagggaccaaaattgcaactttttgaaacttaagaggggaaaagtgcactttaaccta 8389792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 10006400 - 10006344
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||| ||||||||||| |||||||||||||  || |||||||||||||||||||    
T  10006400 tagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 10006344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 1823618 - 1823551
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||  ||| ||||||||||||||| ||||| ||||||||||| | |||||| |||||||||||    
T  1823618 tttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcct 1823551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 1858063 - 1857996
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||  ||| ||||||||||||||| ||||| ||||||||||| | |||||| |||||||||||    
T  1858063 tttttgtacttagagggtcaaaattgcaagtttttaaaagttaagggggaaaaagtacactttagcct 1857996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 22220454 - 22220379
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaa 84  Q
    ||||| || |||||||||||||||||||| | ||| |||||||  || ||||||||||||||||||| || |||||    
T  22220454 tttttatacatagggggtcaaaattgcaagtattttaaagttagagggggaaaagtgcactttagccaaagataaa 22220379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 29968372 - 29968434
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcacttta 72  Q
    ||||||||  ||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||    
T  29968372 tttttgtacttagggggccaaaattgcaagtttttaaaagttaaggg-ggaaaagtgcacttta 29968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 30335713 - 30335638
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||| |||||||||  ||| | | ||||||||||| ||||| ||||||||||| |||||| |||||||||||||    
T  30335713 aattgtaatttttgtacttagcgagccaaaattgcaagtttttaaaagttaagggtggaaaaatgcactttagcct 30335638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 38974849 - 38974790
Alignment:
Q  21 gggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||| |||||| ||||| |||||||||||| ||| ||||||||||||||||||| ||||    
T  38974849 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagccaaaaa 38974790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 38980091 - 38980146
Alignment:
Q  21 gggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||| |||||| ||||| |||||||||||| ||| ||||||||||||||||||||    
T  38980091 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcct 38980146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 39005947 - 39005888
Alignment:
Q  21 gggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||| |||||| ||||| |||||||||||| ||| ||||||||||||||||||| ||||    
T  39005947 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagccaaaaa 39005888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 39011188 - 39011243
Alignment:
Q  21 gggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||| |||||| ||||| |||||||||||| ||| ||||||||||||||||||||    
T  39011188 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcct 39011243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 36337621 - 36337679
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    |||||||||||||||||||||||||| |||| |  ||||||||||| || |||||||||    
T  36337621 ggggtcaaaattgcaactttttgaaacttaaagagggaaaagtgcatttaagcctaaaa 36337679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Original strand, 11288914 - 11288963
Alignment:
Q  28 aaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    |||||||||| ||||||||||||| ||| | |||||||||||||||||||    
T  11288914 aaaattgcaagtttttgaaagttaggggtgaaaaagtgcactttagccta 11288963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 45114569 - 45114618
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||| |||||    
T  45114569 caaaattgcaagtttttgaaagttaggggcggaaaagtgcacttcagcct 45114618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 45503810 - 45503749
Alignment:
Q  90 gaaaggtgaagtttaatattgttatcgaatcaaatttcaactattaaacgaaggaccgagag 151  Q
    |||| |||||||||||||||| |||||||||||| ||||| ||| |||||| | ||||||||    
T  45503810 gaaatgtgaagtttaatattgatatcgaatcaaacttcaaatatcaaacgatgaaccgagag 45503749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 5514047 - 5513980
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||  ||||||| |||||||| || |||||||||||| |||| | |||||||||||||||||||    
T  5514047 tttttgtacttagggggccaaaattggaagtttttgaaagtt-agggggtaaaagtgcactttagccta 5513980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 8388528 - 8388463
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||||| ||||||||  |||||||||||||||| |||||||  || || |||||||||||||||||    
T  8388528 tttttgtacatagggggctaaaattgcaactttttaaaagtta--ggggggaaagtgcactttagcct 8388463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 24483199 - 24483143
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||| ||||||||||| ||||||||| ||| | | |||||||||||||||||||    
T  24483199 tagggggccaaaattgcaagtttttgaaaattaggaggggaaaagtgcactttagcc 24483143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 44147200 - 44147280
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaat 81  Q
    ||||||||||||| |  |||||||| |||||| ||||  ||||||||  || |||  ||||||||||||||||||||||||    
T  44147200 aattgtcattttttttaatagggggccaaaatcgcaatattttgaaacatatggggcgaaaagtgcactttagcctaaaat 44147280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 7117360 - 7117423
Alignment:
Q  18 atagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaat 81  Q
    ||||| ||||||||| |||||||||||||| ||||| |  || ||||||| |||||||||||||    
T  7117360 ataggtggtcaaaatcgcaactttttgaaacttaagtggtgataagtgcagtttagcctaaaat 7117423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 27933372 - 27933407
Alignment:
Q  94 ggtgaagtttaatattgttatcgaatcaaatttcaa 129  Q
    ||||||||||||||||||||||||||||||| ||||    
T  27933372 ggtgaagtttaatattgttatcgaatcaaatatcaa 27933407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 32973983 - 32974042
Alignment:
Q  21 gggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||| |||||| ||||| |||||||||||| ||| | ||||||||||||||||| ||||    
T  32973983 gggggccaaaatcgcaacgttttgaaagttaggggggaaaaagtgcactttagccaaaaa 32974042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 8802474 - 8802396
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    ||||| ||||||| |  |||||||| |||||| ||||| |||| |||  || |||| ||||||||||||||||||||||    
T  8802474 aattgccattttttttaatagggggccaaaatcgcaacattttaaaacatacgggacgaaaagtgcactttagcctaaa 8802396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 3819541 - 3819489
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    |||| |||||||||||| |||||||| ||||||| |||||| ||||||||||||    
T  3819541 ggggccaaaattgcaacattttgaaacttaaggg-ggaaaaatgcactttagcc 3819489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 32207360 - 32207425
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||  ||||| ||||||||||||| |||||||| ||||  || || |||||||||||||||||    
T  32207360 tttttgtacttagggcgtcaaaattgcaagtttttgaaggtta--ggggggaaagtgcactttagcct 32207425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 47
Target Start/End: Complemental strand, 35795273 - 35795245
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaa 47  Q
    |||||||||||||||||||||||||||||    
T  35795273 tagggggtcaaaattgcaactttttgaaa 35795245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 43661331 - 43661267
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttag 73  Q
    |||||||| ||| |||  |||||||| |||||||| ||| |||||||  ||||||||||||||||    
T  43661331 tttttgtacataagggaccaaaattgtaacttttttaaaattaagggtagaaaagtgcactttag 43661267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 1963262 - 1963192
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    |||||||| ||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1963262 tttttgtacataggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcctaaa 1963192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 10470620 - 10470545
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||| ||||| |||  ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  10470620 aattgtgattttggtacttagagggtcaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcct 10470545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 10471433 - 10471489
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  10471433 tagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 10471489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 48780304 - 48780245
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||||||||||||||| ||||| ||||||| ||| ||||||||||||||||||||||    
T  48780304 tagggggtcaaaattgcaagtttttaaaagttagggggggaaaagtgcactttagcctaa 48780245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 1835147 - 1835205
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||||||||||||| ||||||||||||| ||  |||||||||||||||||||||    
T  1835147 tagggggtcaaaattgcaagtttttgaaagttagggatggaaaagtgcactttagccta 1835205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 1964476 - 1964542
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    |||||||  |||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||    
T  1964476 tttttgttcatagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcactttagcc 1964542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 1290233 - 1290302
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||||  ||| ||| |||||||||||  |||||||||||||||| ||||||||||||||||||||||    
T  1290233 tttttgtacttagagggccaaaattgcaagattttgaaagttaaggggggaaaagtgcactttagcctaa 1290302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 19750610 - 19750685
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaaa 85  Q
    ||||||||  ||||||| ||||||||||| ||||| ||||||| ||| ||||||||||||||||| |||||||||||    
T  19750610 tttttgtacttagggggccaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagtctaaaataaaa 19750685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 19789196 - 19789121
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaaa 85  Q
    ||||||||  ||||||| ||||||||||| ||||| ||||||| ||| ||||||||||||||||| |||||||||||    
T  19789196 tttttgtacttagggggccaaaattgcaagtttttaaaagttagggg-ggaaaagtgcactttagtctaaaataaaa 19789121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 25684986 - 25684934
Alignment:
Q  23 gggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  25684986 gggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcc 25684934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 49308062 - 49308129
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||  ||||||| ||||||||||| |||||||||||| |||| |||||||||||||||||||||    
T  49308062 tttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagccta 49308129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 10447073 - 10447006
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaag-ggaggaaaagtgcactttagcc 75  Q
    |||||||| ||||||||  |||||||||||||||||||| ||||| || |||||||||||||||||||    
T  10447073 tttttgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgcactttagcc 10447006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 25685867 - 25685926
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||| ||||||||||| |||||||||||||  || ||||||||||||||||||||||    
T  25685867 tagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctaa 25685926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 52491660 - 52491715
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaata 82  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||||||||| ||||    
T  52491660 caaaattgcaagtttttgaaagttaagggtggaaaagtacactttagcctataata 52491715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 3928902 - 3928960
Alignment:
Q  18 atagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||||| |||||| ||||| |||||||||||| ||| ||||||||||||||||||||    
T  3928902 atagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcct 3928960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 10448295 - 10448365
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    |||||||| ||||||||  ||||| |||||||||||||| ||| ||||||  |||||||||||||||||||    
T  10448295 tttttgtacatagggggctaaaatcgcaactttttgaaacttaggggaggggaagtgcactttagcctaaa 10448365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 27257995 - 27258041
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaaggg 55  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||    
T  27257995 tttttgtatatagagggtcaaaattgcaactttttaaaagttaaggg 27258041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 8758882 - 8758935
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcacttta 72  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||    
T  8758882 tagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcatttta 8758935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 26421657 - 26421725
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||||  |||| |||||||||||||| |||||||||||| || | ||||||||||||||||||||||    
T  26421657 tttttgtacttaggaggtcaaaattgcaagtttttgaaagtt-agaggggaaaagtgcactttagcctaa 26421725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 31601020 - 31601095
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaaa 85  Q
    ||||||||  ||||||||||||||||||| ||||| |||||||  || | ||||||||||||||||| |||||||||    
T  31601020 tttttgtacttagggggtcaaaattgcaagtttttaaaagttagaggggaaaaagtgcactttagcc-aaaataaaa 31601095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 1834185 - 1834114
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||| || ||||||||||||||||| || ||||| |||||||  || ||||||||||||||||||| ||||    
T  1834185 tttttatacatagggggtcaaaattgtaagttttttaaagttagagggggaaaagtgcactttagccaaaaa 1834114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 12129689 - 12129626
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcacttta 72  Q
    ||||||||  || |||| ||||||||||| ||||||||||||||| | ||||||||||||||||    
T  12129689 tttttgtacttacggggccaaaattgcaagtttttgaaagttaagaggggaaaagtgcacttta 12129626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 13386580 - 13386635
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagttaagggagg-aaaagtgcactttagcct 76  Q
    |||||||||||||||| ||||||||||||| ||| || ||||||||||||||||||    
T  13386580 ggggtcaaaattgcaagtttttgaaagttagggggggaaaaagtgcactttagcct 13386635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 17388264 - 17388318
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaata 82  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||||||| ||||    
T  17388264 caaaattgcaagtttttgaaagttagggg-ggaaaagtgcactttagcctataata 17388318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 21178062 - 21177992
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    |||||||  ||||||| |||||||||||||||| |||||||| |||| || ||||| |||||||||||||||    
T  21178062 tttttgttcataggggatcaaaattgcaactttatgaaagtt-agggggggaaagtacactttagcctaaaa 21177992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 31599855 - 31599788
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||  ||||||||||||||||||| ||||| ||||||| ||| | |||||||||||| |||||    
T  31599855 tttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagcct 31599788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 55603566 - 55603636
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    |||||||| | ||||| | |||||||||| ||||||||||||||||| | |||||||||||||| |||||||    
T  55603566 tttttgtacacaggggattaaaattgcaagtttttgaaagttaaggg-gaaaaagtgcactttaacctaaaa 55603636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 5526171 - 5526228
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||| ||||||||||| |||||||||||| || | |||||||||||||||||||||    
T  5526171 tagggggccaaaattgcaagtttttgaaagtt-agaggggaaaagtgcactttagccta 5526228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 8898705 - 8898799
Alignment:
Q  90 gaaaggtgaagtttaatattgttatcgaatcaaatttcaactattaaacgaaggaccgagaggtgaagtttgatattggtacatatgagattaga 184  Q
    ||||||||||||||||||||  |||  |||||||  |||| ||| |||||||  | |||||||||||||||||||||||   | |||||||||||    
T  8898705 gaaaggtgaagtttaatattaatattaaatcaaacctcaaatatcaaacgaataagcgagaggtgaagtttgatattggattaaatgagattaga 8898799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 17383040 - 17382991
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||||| ||||||||||||| |||| ||||||||||||||||||||    
T  17383040 caaaattgcaagtttttgaaagttagggga-gaaaagtgcactttagccta 17382991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 46638752 - 46638817
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgca 67  Q
    |||||| ||||||||  ||||||| |||||||| |||||||||||||||||| ||||||||| ||||    
T  46638752 aattgtaatttttgttcataggggatcaaaattccaactttttgaaagttaa-ggaggaaaaatgca 46638817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 5525415 - 5525359
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||||||||||||| |||||||||||| |||| |||||| || ||||||||||    
T  5525415 tagggggtcaaaattgcaagtttttgaaagtt-aggggggaaaaatgtactttagcct 5525359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 48781098 - 48781147
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||||| |||||||||||||  || ||||||||||||||||||||    
T  48781098 caaaattgcaaatttttgaaagttagagggggaaaagtgcactttagcct 48781147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 8757730 - 8757672
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    |||||||  ||||||| || ||||||||||||||||| | ||||||||||||||||||||    
T  8757730 tagggggctaaaattgtaagtttttgaaagttaaggg-gaaaaagtgcactttagcctaa 8757672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 13386071 - 13386012
Alignment:
Q  19 tagggggtcaaaattgcaacttttt-gaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||| ||||||||||| ||||| ||||||||  || |||||||||||||||||||||    
T  13386071 tagggggccaaaattgcaagttttttgaaagttagagggggaaaagtgcactttagccta 13386012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 52490519 - 52490468
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttag 73  Q
    ||||||||||||||||| |||||||| ||||| | |||||| ||||||||||    
T  52490519 ggggtcaaaattgcaacattttgaaacttaagagcggaaaattgcactttag 52490468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 1289146 - 1289092
Alignment:
Q  26 tcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    |||||||| ||| | ||||||||||||||| |||||||| ||||||| |||||||    
T  1289146 tcaaaattacaaatatttgaaagttaaggggggaaaagttcactttaacctaaaa 1289092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 13509406 - 13509463
Alignment:
Q  21 gggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    ||||| ||||||||||| ||||| ||||||| ||| |||||||| ||||||||||||||    
T  13509406 gggggccaaaattgcaattttttaaaagttagggg-ggaaaagtacactttagcctaaa 13509463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 37728600 - 37728671
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggagg-aaaagtgcactttagcctaaaat 81  Q
    |||||||| ||||| || ||||||||||||||||| |||||||  ||||| |||| ||||||||| ||||||||    
T  37728600 tttttgtacataggaggccaaaattgcaactttttaaaagtta--ggaggaaaaaatgcactttaacctaaaat 37728671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 35935578 - 35935631
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcacttta 72  Q
    |||||||  |||||||||| ||||| ||||||||||| || |||||||||||||    
T  35935578 tagggggctaaaattgcaaatttttaaaagttaagggggggaaagtgcacttta 35935631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 49306822 - 49306770
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||||||||| ||||||||||||  ||||  ||||||||||||||||||||||    
T  49306822 caaaattgcaagtttttgaaagttgggggaa-aaaagtgcactttagcctaaaa 49306770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 1961171 - 1961231
Alignment:
Q  18 atagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    |||||||| ||||||||||||||||  ||| ||| |||   ||||||||||||||||||||    
T  1961171 atagggggccaaaattgcaacttttgcaaacttagggggtaaaaagtgcactttagcctaa 1961231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 2837159 - 2837195
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaaggg 55  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  2837159 tagggggccaaaattgcaacttcttgaaagttaaggg 2837195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 13826493 - 13826418
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||| ||||||| || ||||||||||||||| ||||| |||| |||  || |||  ||||||||||||||||||||    
T  13826493 aattgccattttttta-atagggggtcaaaatcgcaacatttttaaacatagggggcgaaaagtgcactttagccta 13826418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 50909338 - 50909271
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||| |||||||| |||||||||||||||||||| ||| ||| ||||  |||| | ||||||||||||    
T  50909338 tttttatatataggaggtcaaaattgcaactttttaaaacttagggga-aaaaaatacactttagccta 50909271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 5e-20; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 22940649 - 22940723
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    |||||| |||||||||  ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  22940649 aattgtaatttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 22940723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 28538742 - 28538671
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||||||  || |||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  28538742 tttttgtacttaaggggtcaaaattgcaagtttttgaaagttacgggtggaaaagtgcactttagcctaaaa 28538671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 16650900 - 16650958
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||    
T  16650900 tagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagccta 16650958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 18486947 - 18487013
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaaa 85  Q
    ||||||| ||||||||||| ||||||||||||||||| || |||||||||||||||||| |||||||    
T  18486947 tagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcactttagcctacaataaaa 18487013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 25523135 - 25523065
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    ||||||||  |||||||  |||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  25523135 tttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctaaa 25523065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 179 - 302
Target Start/End: Complemental strand, 1589823 - 1589702
Alignment:
Q  179 attagagaagtctctcaaaaaatctataaagatacttttgattgcatttgggacaataatgttgtgctcaaagggtctctcaatgataatcaa-cttgag 277  Q
    |||||| |||| |||||||||||||  |||||||  ||||||||| ||||||||||| | |||||||||||||||  |||||||||||||||| | |||     
T  1589823 attagacaagtttctcaaaaaatctgcaaagataggtttgattgcttttgggacaat-aggttgtgctcaaaggg--tctcaatgataatcaaccatgaa 1589727  T
Q  278 aatatgcatgattattgttgagata 302  Q
    ||||  | |||||||||||||||||    
T  1589726 aataaacttgattattgttgagata 1589702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 20216798 - 20216868
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    ||||||||||||||| |  |||||||||| ||||||||| ||||||| |||||||||||||||| ||||||    
T  20216798 tttttgtatatagggagctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttaacctaaa 20216868  T

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Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 20653892 - 20653816
Alignment:
Q  3 ttgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    ||||||||||| |  ||| ||||||||||| |||||||||| ||| ||||| || ||||||||||||||||||||||    
T  20653892 ttgtcattttttttcataaggggtcaaaatcgcaactttttaaaacttaagagatgaaaagtgcactttagcctaaa 20653816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 25056426 - 25056482
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||||||||||||||| ||||||||||||| | | |||||||||||||||||||    
T  25056426 tagggggtcaaaattgcaagtttttgaaagttaggagtggaaaagtgcactttagcc 25056482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 77
Target Start/End: Original strand, 40255711 - 40255775
Alignment:
Q  13 tgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||| ||||||||||||||||||| ||||| ||| ||||| | |||||||||||||||||||||    
T  40255711 tgtatttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcactttagccta 40255775  T

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Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 19752977 - 19752911
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||  ||||||| ||||||||||| |||||||||||| |||| ||||||||||||||||||||    
T  19752977 tttttgtacttagggggccaaaattgcaagtttttgaaagtt-aggggggaaaagtgcactttagcct 19752911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 33160331 - 33160389
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    |||||||  |||||||||| ||||||||| ||||||| |||||||||||||||||||||    
T  33160331 tagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagccta 33160389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 38476724 - 38476786
Alignment:
Q  18 atagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    |||||||||||||||  ||||||||| ||| |||||||  |||||||||||||||||||||||    
T  38476724 atagggggtcaaaatcacaactttttaaaacttaaggggtgaaaagtgcactttagcctaaaa 38476786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 5777955 - 5777897
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    ||||||||||||||||||| |||||||||||||  || || ||||||||||||||||||||    
T  5777955 tagggggtcaaaattgcaagtttttgaaagtta--ggggggaaagtgcactttagcctaaa 5777897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 31576592 - 31576664
Alignment:
Q  3 ttgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||||| | ||||||||| |||||| |||||||||| ||| |||||||  |||||||||||||||||||    
T  31576592 ttgtcattttttt-tatagggggacaaaatcgcaactttttaaaacttaaggggtgaaaagtgcactttagcct 31576664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 36486523 - 36486595
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaat 81  Q
    ||||||||  ||||||||||||||||||| ||||| ||||||| ||| | |||||||||||| ||||| ||||    
T  36486523 tttttgtacttagggggtcaaaattgcaagtttttaaaagttaggggggaaaaagtgcacttcagccttaaat 36486595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 5730490 - 5730439
Alignment:
Q  27 caaaattgcaactttttgaaagttaa-gggaggaaaagtgcactttagccta 77  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  5730490 caaaattgcaagtttttgaaagttaagggggggaaaagtgcactttagccta 5730439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 20214242 - 20214196
Alignment:
Q  28 aaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||    
T  20214242 aaaattgcaagtttttgaaagttaaggg-ggaaaagtgcactttagcc 20214196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 23040287 - 23040342
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||||| |||||||||| ||| |||||||| |||||||| |||||||||||    
T  23040287 ggggtcaaaatcgcaactttttaaaacttaagggatgaaaagtgtactttagccta 23040342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 24332979 - 24332916
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcacttta 72  Q
    |||||||| ||| |||| ||||||||||| ||||||||| ||||||| | ||||||||||||||    
T  24332979 tttttgtacataaggggccaaaattgcaagtttttgaaacttaagggggaaaaagtgcacttta 24332916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 1015549 - 1015483
Alignment:
Q  10 ttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||| | |||||| |||||||| |||||||| ||||||| ||||||||||||||| ||| ||||    
T  1015549 ttttgtacacagggggccaaaattgtaactttttaaaagttaggggaggaaaagtgcatttttgcct 1015483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 2188965 - 2189030
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    |||||||| ||||||| | ||||| |||||||||||||| ||||| |||||||||||| ||||||||    
T  2188965 tttttgtacataggggct-aaaatcgcaactttttgaaacttaagagaggaaaagtgcgctttagcc 2189030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 2373375 - 2373453
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    ||||||| ||||| || ||||| || |||||| |||||||||||||| ||| |||  |||||||||| |||||||||||    
T  2373375 aattgtcctttttttaaataggaggccaaaatcgcaactttttgaaacttaggggttgaaaagtgcagtttagcctaaa 2373453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 5778881 - 5778939
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    |||||||  |||||||||| |||||||||||||  || |||||||||||||||||||||    
T  5778881 tagggggcaaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccta 5778939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 42195197 - 42195137
Alignment:
Q  10 ttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcacttta 72  Q
    ||||||| |||||||| |||||| |||||||||| ||||||||||| ||||||||||||||||    
T  42195197 ttttgtacatagggggccaaaatcgcaacttttt-aaagttaaggg-ggaaaagtgcacttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 19754165 - 19754234
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggag-gaaaagtgcactttagccta 77  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||| ||| |  |||| ||||||||||||||    
T  19754165 tttttgtatttagggggccaaaattgcaagtttttgaaagttaggggggaaaaaaatgcactttagccta 19754234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 15885187 - 15885132
Alignment:
Q  18 atagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttag 73  Q
    |||||| |||||||| |||||||||||||| |||||||  |||||||||| |||||    
T  15885187 atagggtgtcaaaatcgcaactttttgaaacttaaggggtgaaaagtgcaatttag 15885132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 18154547 - 18154492
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||||||| || |||||||||||||||||   |||||| ||||||||||||    
T  18154547 ggggtcaaaattgtaagtttttgaaagttaaggggaaaaaagttcactttagccta 18154492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 33158164 - 33158097
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||  ||||| ||||||||||||| ||||||||||||| |||   |||| |||||||||||||    
T  33158164 tttttgtacttagggtgtcaaaattgcaagtttttgaaagttagggggaaaaaaatgcactttagcct 33158097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 1796120 - 1796054
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||||  |||| || |||| |||||| ||||||||||||| ||| |||||| ||||||||||||    
T  1796120 tttttgtacttaggtggccaaagttgcaagtttttgaaagttaggggtggaaaaatgcactttagcc 1796054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 2373194 - 2373141
Alignment:
Q  28 aaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaat 81  Q
    ||||| |||||||||| ||| |||||||  |||||||||||||||| |||||||    
T  2373194 aaaatcgcaactttttaaaacttaaggggtgaaaagtgcactttagtctaaaat 2373141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 16799917 - 16799982
Alignment:
Q  18 atagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataa 83  Q
    |||||||||||||||||||||||||  ||| ||||||||  |||||||   || ||||||||||||    
T  16799917 atagggggtcaaaattgcaacttttgcaaacttaagggacaaaaagtgggtttaagcctaaaataa 16799982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 18485194 - 18485137
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||| ||||||||||| ||||| |||||||  || | ||||||||||||||||||    
T  18485194 tagggggccaaaattgcaagttttttaaagttagaggggaaaaagtgcactttagcct 18485137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 84
Target Start/End: Complemental strand, 24242073 - 24242008
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaa 84  Q
    |||||||||||||| ||| |||| ||||||||| |||   |||| |||| ||||||||||||||||    
T  24242073 tagggggtcaaaatcgcacctttgtgaaagttagggggtcaaaactgcagtttagcctaaaataaa 24242008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 257
Target Start/End: Original strand, 24887242 - 24887347
Alignment:
Q  153 tgaagtttgatattggtacatatgagattagagaagtctctc-aaaaaatctataaagatacttttgattgcatttgggacaataatgttgtgctcaaag 251  Q
    |||| ||||||||||  ||| ||||||||||| ||||||||| |||||||||  ||| |||  ||||||| | ||||||| ||| | |||| ||||| ||    
T  24887242 tgaaatttgatattgaaacaaatgagattagacaagtctctcaaaaaaatcttcaaatataggtttgatttcttttgggataattaggttgcgctcatag 24887341  T
Q  252 ggtctc 257  Q
    ||||||    
T  24887342 ggtctc 24887347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 31648240 - 31648297
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaa 84  Q
    |||||| ||||| ||||||||  || |||| |||||||||| ||||||||||||||||    
T  31648240 caaaatcgcaacattttgaaacataggggacgaaaagtgcagtttagcctaaaataaa 31648297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 42196235 - 42196303
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    |||||||| |||| ||| |||| |  ||||||||| ||||||| ||| || ||||||||||||||||||    
T  42196235 tttttgtacatagagggccaaattcacaactttttaaaagttaggggggggaaagtgcactttagccta 42196303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 8e-19; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 36449844 - 36449776
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||  ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  36449844 tttttgtacttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 36449776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 7899935 - 7899988
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  7899935 caaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctaaaa 7899988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 23869570 - 23869638
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||||| ||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  23869570 tttttgtatttagggggccaaaattgcaagttttt-aaagttaagggtggaaaagtgcactttagcctaa 23869638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 38840528 - 38840596
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||  |||||||  |||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  38840528 tttttgtacttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccta 38840596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 11938841 - 11938895
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaat 81  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||    
T  11938841 caaaattgcaagtttttgaaagttaggggtggaaaagtgcactttagcctaaaat 11938895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1093173 - 1093253
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaata 82  Q
    |||||| ||||||||||||||||  ||| ||||||||| |||| ||||||||||| |||||| | |||||||||||||||||    
T  1093173 aattgtaatttttgtatatagggaatcacaattgcaacattttaaaagttaaggggggaaaa-tacactttagcctaaaata 1093253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 18868990 - 18868921
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||||| |||| || ||||||||||| ||||||||||||| ||| |||||||| |||||||||||||    
T  18868990 tttttgtatttaggaggccaaaattgcaagtttttgaaagttaggggtggaaaagtacactttagcctaa 18868921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 18904433 - 18904364
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||||  || |||| ||||||||||  ||||||||||||||||| ||||||||||||||||||||||    
T  18904433 tttttgtacttaaggggccaaaattgcacgtttttgaaagttaaggggggaaaagtgcactttagcctaa 18904364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 1034514 - 1034570
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  1034514 tagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagcc 1034570  T

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Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 16446220 - 16446149
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||||||| || | ||| |||||||||| |||||||||||||||||  ||||| |||||||||||||||||    
T  16446220 tttttgtatttatgaggttaaaattgcaagtttttgaaagttaagggtagaaaaatgcactttagcctaaaa 16446149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 22848257 - 22848190
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||| ||||||  ||||||||||| ||||||||||||| ||| | ||||||||||||||||||    
T  22848257 tttttgtatttaggggaccaaaattgcaagtttttgaaagttaggggggtaaaagtgcactttagcct 22848190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 36450974 - 36451028
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaata 82  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||    
T  36450974 caaaattgcaagtttttgaaagttaaggg-ggaaaagtgcactttaacctaaaata 36451028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 77
Target Start/End: Complemental strand, 18797300 - 18797244
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagtta-agggaggaaaagtgcactttagccta 77  Q
    |||||||||||||||| |||||||||||||  ||| |||||||||||||||||||||    
T  18797300 ggggtcaaaattgcaagtttttgaaagttagggggtggaaaagtgcactttagccta 18797244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 18299421 - 18299366
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaata 82  Q
    |||||||| || ||||||||||||| ||| ||||||||||||||||||| ||||||    
T  18299421 caaaattgaaagtttttgaaagttacgggtggaaaagtgcactttagccaaaaata 18299366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 18906022 - 18906093
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||||||  |||||||  |||||||||| |||||||||||||   | ||||||||||||||||||||||||    
T  18906022 tttttgtacttagggggctaaaattgcaagtttttgaaagttagaaggggaaaagtgcactttagcctaaaa 18906093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 226 - 303
Target Start/End: Complemental strand, 24185090 - 24185014
Alignment:
Q  226 ttgggacaataatgttgtgctcaaagggtctctcaatgataatcaact-tgagaatatgcatgattattgttgagatat 303  Q
    |||||||||||| ||||  |||||||||||||  |||||||||||||  |||||||| || ||||||||||||||||||    
T  24185090 ttgggacaataaggttgcactcaaagggtctc--aatgataatcaaccatgagaataggcttgattattgttgagatat 24185014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 38839308 - 38839237
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||||||  |||||||  |||||||||| ||||||||| ||||||| | |||| |||||||||||||||||    
T  38839308 tttttgtagttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcactttagcctaaaa 38839237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 41879257 - 41879316
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||| ||||||||||| ||||||||| ||||||| | ||||||| ||||||||||||    
T  41879257 tagggggccaaaattgcaagtttttgaaaattaagggggaaaaagtgtactttagcctaa 41879316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 21837300 - 21837355
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||| ||||||||||| ||||||||||||| ||||  ||||||||||||||||||    
T  21837300 tagggggccaaaattgcaagtttttgaaagttagggga--aaaagtgcactttagcct 21837355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 26829332 - 26829390
Alignment:
Q  18 atagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||||| |||||| ||||| |||| ||| |||||||| |||||||||||||||||||    
T  26829332 atagggggccaaaatcgcaacattttaaaacttaagggatgaaaagtgcactttagcct 26829390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 77
Target Start/End: Complemental strand, 7898738 - 7898689
Alignment:
Q  28 aaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    |||||||||| |||||||||||||||||  ||||||||||||||| ||||    
T  7898738 aaaattgcaagtttttgaaagttaaggggagaaaagtgcactttaaccta 7898689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 26545555 - 26545628
Alignment:
Q  8 atttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaat 81  Q
    |||||||||| || |||||||||||||||| ||||||||||| | |   | |||||||||||||||| ||||||    
T  26545555 atttttgtatttaaggggtcaaaattgcaaatttttgaaagtcatgaaggaaaaagtgcactttagcttaaaat 26545628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 11257669 - 11257621
Alignment:
Q  28 aaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||||||| |||||||||||||  |||| ||||||||||||||||||    
T  11257669 aaaattgcaagtttttgaaagttagaggagtaaaagtgcactttagcct 11257621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 22587989 - 22588060
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaat 81  Q
    |||||||| |||||||  ||||||||||| ||||||||||||| | | |||||| ||||||||||||| ||||    
T  22587989 tttttgtacataggggc-caaaattgcaagtttttgaaagttatgaggggaaaaatgcactttagccttaaat 22588060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 28365565 - 28365509
Alignment:
Q  22 ggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||||||| |||||||||| ||| |||||||  |||||||||| ||||||||||    
T  28365565 ggggtcaaaatcgcaactttttaaaatttaaggggtgaaaagtgcattttagcctaa 28365509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 802626 - 802692
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||||| | |||||| ||||||||||| ||||||||| || |||| |||||||| |||||||||||    
T  802626 tttttgtacacagggggccaaaattgcaagtttttgaaactt-aggggggaaaagtacactttagcct 802692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 32739689 - 32739622
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||||| ||| |||| ||||||||||| ||||||||||||| ||||  |||| | |||||||||||    
T  32739689 tttttgtacataaggggccaaaattgcaagtttttgaaagttaggggaaaaaaaatacactttagcct 32739622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 13830323 - 13830270
Alignment:
Q  18 atagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcacttta 72  Q
    ||||||||||||||| |||||||||| ||| || |||| ||||||||||||||||    
T  13830323 atagggggtcaaaatcgcaactttttcaaactt-aggggggaaaagtgcacttta 13830270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 18300759 - 18300822
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagc 74  Q
    ||||||||  ||||||||||||||||||| ||| |||||||||  || ||||||||||| ||||||    
T  18300759 tttttgtacttagggggtcaaaattgcaagtttatgaaagtta--gggggaaaagtgcaatttagc 18300822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 184
Target Start/End: Complemental strand, 24185216 - 24185127
Alignment:
Q  95 gtgaagtttaatattgttatcgaatcaaatttcaactattaaacgaaggaccgagaggtgaagtttgatattggtacatatgagattaga 184  Q
    ||||||||| ||||||||||  ||||| || |||| ||| |||||||| ||  |||||| || |||||||||||  || |||||||||||    
T  24185216 gtgaagtttgatattgttatttaatcatatctcaaatatcaaacgaagaacaaagaggtcaaatttgatattggatcaaatgagattaga 24185127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 30714348 - 30714268
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaata 82  Q
    ||||| ||||||| || |||||||| |||||| ||||| |||| |||  || |||  |||||||||||||||||||||||||    
T  30714348 aattgccattttttta-atagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagcctaaaata 30714268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 11258846 - 11258913
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagtta-agggaggaaaagtgcactttagcct 76  Q
    ||||||||  ||||||| ||||||||||| ||||||||||||| || | |||||| |||||||||||||    
T  11258846 tttttgtacttagggggccaaaattgcaagtttttgaaagttagagaggggaaaa-tgcactttagcct 11258913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 13570611 - 13570659
Alignment:
Q  28 aaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||||||| ||||||||||||| |||  ||||| |||||||||||||    
T  13570611 aaaattgcaagtttttgaaagttatgggtagaaaaatgcactttagcct 13570659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 35406740 - 35406804
Alignment:
Q  126 tcaactattaaacgaaggaccgagaggtgaagtttgatattggtacatatgagattagagaagtc 190  Q
    |||| ||| |||||||||||||| || |||||||||||||| |  || ||||||||||| |||||    
T  35406740 tcaaatatcaaacgaaggaccgaaagatgaagtttgatattagagcagatgagattagacaagtc 35406804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 299 - 233
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    |||||||| |||||||  ||||||||||||||||||||||||||||| || ||||||||||||||||    
T  299 tttttgtacataggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcactttagcc 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 3343 - 3418
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaaa 85  Q
    ||||||||  || ||||||||||||| || ||||||||||| ||||| |||||||||||||||||||||||||||||    
T  3343 tttttgtacctatggggtcaaaattgtaagtttttgaaagt-aaggggggaaaagtgcactttagcctaaaataaaa 3418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 49476 - 49536
Alignment:
Q  17 tatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||| ||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  49476 tatagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagccta 49536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 43539 - 43616
Alignment:
Q  3 ttgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||||||||  || ||| | |||||||||||||||||||||||| ||||||| | |||| ||||||| |||||||||    
T  43539 ttgtcattttattaaataagaggtcaaaattgcaactttttgaaacttaagggggaaaaactgcacttaagcctaaaa 43616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 39392 - 39342
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    |||||||| |||||||| ||| ||||||| |||||||||||||||||||||    
T  39392 caaaattgtaactttttaaaacttaaggggggaaaagtgcactttagccta 39342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 60156 - 60085
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||| || |||||||||||||||||||| ||||| |||||||  |||||||||||||||||||||| ||||    
T  60156 tttttatacatagggggtcaaaattgcaagtttttaaaagttagaggaggaaaagtgcactttagccaaaaa 60085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 61494 - 61559
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagc 74  Q
    ||||||||  |||||||  |||||||||| ||||||||| ||||||||||||||||||||||||||    
T  61494 tttttgtacttagggggctaaaattgcaagtttttgaaaattaagggaggaaaagtgcactttagc 61559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 8e-16; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 3227639 - 3227698
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||| ||||||||||| ||||||||||||| ||| ||||||||||||||||||||||    
T  3227639 tagggggccaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcctaa 3227698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 17781717 - 17781663
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttag 73  Q
    ||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||    
T  17781717 tagggggtcaaaattgcaagtttttgaaagttagggggggaaaagtgcactttag 17781663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 21505480 - 21505414
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||  || |||||||||||||||||||||    
T  21505480 tttttgtatatcgggggccaaaatcgcaactttttgaaagtta--gggggaaaagtgcactttagccta 21505414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 22630487 - 22630556
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||||  ||||||| ||||||||||| ||||||||||||| ||  ||||||||||||||||||||||    
T  22630487 tttttgtaattagggggccaaaattgcaagtttttgaaagttatggagggaaaagtgcactttagcctaa 22630556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 11658445 - 11658377
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    |||||||| ||||||||  |||||||||  ||||||||||||||||| ||||||||||| |||||||||    
T  11658445 tttttgtacatagggggctaaaattgcatgtttttgaaagttaaggggggaaaagtgcaatttagccta 11658377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 31949837 - 31949905
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    |||| |||| ||||||| ||||||||||| ||||||||||||| ||| |||| ||||||||||||||||    
T  31949837 ttttggtatttagggggccaaaattgcaagtttttgaaagttagggggggaagagtgcactttagccta 31949905  T

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Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 42886321 - 42886389
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| | |  ||||||||||||||| ||||    
T  42886321 tttttgtatttagggggtcaaaattgcaaatttttgaaagttaggaggagaaaagtgcactttaaccta 42886389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 7501897 - 7501956
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||| ||||||||||| |||||||||||||  || ||||||||||||||||||||||    
T  7501897 tagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcctaa 7501956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 20163591 - 20163658
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||||| |||||| | ||||||||||| ||||||||||||| ||| ||| ||||||||||||||||    
T  20163591 tttttgtacatagggagccaaaattgcaagtttttgaaagttaggggtggagaagtgcactttagcct 20163658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 256
Target Start/End: Original strand, 23395054 - 23395216
Alignment:
Q  90 gaaaggtgaagtttaatattgttatcgaatcaaatttcaactattaaacgaaggac-cgagaggtgaagtttgatattggtacatatgagattagagaag 188  Q
    |||| |||||||||||||||| ||| ||||||||||| |  |||||||| ||  |  ||||| || |||||||||||||| | | ||     |||| ||     
T  23395054 gaaaagtgaagtttaatattgatattgaatcaaattttatatattaaacaaaaaaaacgagatgtcaagtttgatattggaataaat-----tagacaaa 23395148  T
Q  189 tctctcaaaaaatctataaagatacttttgattgcatttgggacaataatgttgtgctcaaagggtct 256  Q
    |||||||||||||||| |||||||  ||||| ||| ||||||| ||||| ||||||||||| ||||||    
T  23395149 tctctcaaaaaatctacaaagataggtttgactgcttttgggataataaggttgtgctcaatgggtct 23395216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 32253443 - 32253506
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaata 82  Q
    |||| ||||||||||||||||||||| || ||||||| ||||||||| ||||||||||| ||||    
T  32253443 taggtggtcaaaattgcaactttttgcaacttaagggtggaaaagtgtactttagcctagaata 32253506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 7500503 - 7500454
Alignment:
Q  26 tcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  7500503 tcaaaattgcaagtttttgaaagttaaggg-ggaaaagtgcactttagcct 7500454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 17782598 - 17782656
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||||| ||||||||||| |||||||||||||  || |||||||||||||||||||||    
T  17782598 tagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccta 17782656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 128646 - 128699
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcacttta 72  Q
    ||||||||||||||||||| ||||||||||||| ||  ||||||||||||||||    
T  128646 tagggggtcaaaattgcaaatttttgaaagttatggtgggaaaagtgcacttta 128699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 10234855 - 10234928
Alignment:
Q  94 ggtgaagtttaatattgttatcgaatcaaatttcaactattaaacgaaggaccgagaggt-gaagtttgatatt 166  Q
    |||||||||| ||||||||||  ||||| ||||||| ||| |||||||| |||||||||| |||||||||||||    
T  10234855 ggtgaagtttgatattgttatttaatcatatttcaagtatcaaacgaagtaccgagaggtggaagtttgatatt 10234928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 31659689 - 31659617
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggagg-aaaagtgcactttagcctaaaa 80  Q
    ||||||||  |||||||||||||||| || ||||||||||||| ||| || ||||||||||||||||| ||||    
T  31659689 tttttgtacttagggggtcaaaattgtaagtttttgaaagttagggggggtaaaagtgcactttagccaaaaa 31659617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 31949378 - 31949318
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    ||||||| ||||||||||| ||||||||| ||| ||  |||||||||||||||||||||||    
T  31949378 tagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagcctaaa 31949318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 127384 - 127334
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||||||||    
T  127384 caaaattgcaagtttttgaaagttagggg-ggaaaagtgcactttagcctaa 127334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 20636848 - 20636923
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||| ||||||| || ||||||||||||||| ||||| ||||||||  || |||  |||||||||||||||||||    
T  20636848 aattgccatttttttaaatagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcct 20636923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 27869269 - 27869195
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||||||| || ||||||||||||||| ||||| ||||||||  || |||  |||||||||||||||||||    
T  27869269 aattgtcattttttta-atagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcct 27869195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 39182164 - 39182238
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||||||| || ||||||||||||||||||||| |||| ||| ||| |||  |||||||||| ||||||||    
T  39182164 aattgtcattttttta-atagggggtcaaaattgcaacatttttaaacttagggggcgaaaagtgcagtttagcct 39182238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 11662605 - 11662659
Alignment:
Q  28 aaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaata 82  Q
    |||||||||| ||||||||||||||||| |||||| ||||||||| ||| |||||    
T  11662605 aaaattgcaagtttttgaaagttaaggggggaaaaatgcactttaaccttaaata 11662659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 18371490 - 18371424
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||||  || |||| ||||||||||| ||||||||||||| | | |||||||||||||||||||    
T  18371490 tttttgtacttaaggggccaaaattgcaagtttttgaaagttaggaggggaaaagtgcactttagcc 18371424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 48934938 - 48935004
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||||  ||| ||||||||||| ||| ||||||||||||| ||| |||||| ||||||||||||    
T  48934938 tttttgtacttagagggtcaaaattacaagtttttgaaagttaggggtggaaaaatgcactttagcc 48935004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 8526853 - 8526785
Alignment:
Q  18 atagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaataaaag 86  Q
    ||||||||||||||||||||  |||||||| |||  ||  |||||||| | ||||||||||||||||||    
T  8526853 atagggggtcaaaattgcaaaattttgaaacttagagggtgaaaagtgaaatttagcctaaaataaaag 8526785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 21508457 - 21508506
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    |||||||| |||||||||||||||||||  |||||| |||||||||||||||    
T  21508457 caaaattgaaactttttgaaagttaagg--ggaaaaatgcactttagcctaa 21508506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 47525412 - 47525468
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    |||||||  |||||||||| |||||||||||||  || |||||||||||||||||||    
T  47525412 tagggggctaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagcc 47525468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 34174028 - 34174086
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||| |||||||||||  ||||||||| || ||| ||||||||||||||||||||||    
T  34174028 tagggggccaaaattgcaagattttgaaagatagggg-ggaaaagtgcactttagcctaa 34174086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 30439410 - 30439463
Alignment:
Q  26 tcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaa 80  Q
    ||||||| | |||||||||||||||||||| |  |||||||||||||||||||||    
T  30439410 tcaaaatcgtaactttttgaaagttaaggg-gagaaagtgcactttagcctaaaa 30439463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 42303376 - 42303454
Alignment:
Q  1 aattgtcatttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    ||||||||||||| || |||| ||  |||||| |||||||||||||| ||| |||  || ||||||| |||||||||||    
T  42303376 aattgtcatttttttaaatagaggaccaaaatcgcaactttttgaaacttaggggtcgagaagtgcagtttagcctaaa 42303454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 14999190 - 14999249
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactt 70  Q
    ||||||||| |||||||||||||||||||  |||||||| || |||| ||||||||||||||    
T  14999190 tttttgtatttagggggtcaaaattgcaa-gttttgaaaatt-aggggggaaaagtgcactt 14999249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 31661058 - 31661111
Alignment:
Q  23 gggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    ||||||||||||||| |||||||||||||  |  || |||||||||||||||||    
T  31661058 gggtcaaaattgcaaatttttgaaagttagagaggggaaagtgcactttagcct 31661111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 47524581 - 47524532
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcac 68  Q
    ||||||| ||||||||||| |||||||||||||  || ||||||||||||    
T  47524581 tagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcac 47524532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 47369828 - 47369780
Alignment:
Q  28 aaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||||||||| ||||||||||||| ||||  ||||||||| ||||||||    
T  47369828 aaaattgcaagtttttgaaagttaggggaaaaaaagtgcattttagcct 47369780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 17536 - 17467
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||||  ||||||| ||||||||||| ||||| ||||||||||| | ||||||||||||||||||||    
T  17536 tttttgtacttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcactttagcctaa 17467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 78
Target Start/End: Original strand, 5473 - 5542
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    ||||||||  || |||||||||||||||| ||||||||| ||| ||| ||||||||||||||||||||||    
T  5473 tttttgtacttaaggggtcaaaattgcaagtttttgaaaattagggggggaaaagtgcactttagcctaa 5542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 6409 - 6339
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    |||||||| ||||||||  ||||| | |||||||||||| ||||||| |||||||||||||||| ||||||    
T  6409 tttttgtacatagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtgcactttaacctaaa 6339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 77
Target Start/End: Complemental strand, 1505 - 1437
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagccta 77  Q
    ||||| || |||||||||||||||||||| ||||| |||||||  || |||||||| ||||||||||||    
T  1505 tttttatacatagggggtcaaaattgcaagttttttaaagttagagggggaaaagtacactttagccta 1437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 19544 - 19484
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaa 79  Q
    ||||||| |||||||||||  |||||||| ||||||| |||||| ||||||||||||||||    
T  19544 tagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcactttagcctaaa 19484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 166 - 220
Alignment:
Q  21 gggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||| |||||| ||||| |||||||||||| ||| |||||||||||||||||||    
T  166 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 18794 - 18730
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttag 73  Q
    |||||||  ||||| ||||||||| |||||||||| ||||||||| | | |||||||||||||||    
T  18794 tttttgttcataggaggtcaaaatcgcaactttttaaaagttaagagggaaaaagtgcactttag 18730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 19443 - 19514
Alignment:
Q  8 atttttgtatatagggggtcaaaatt-gcaactttttgaaagttaa-gggaggaaaagtgcactttagccta 77  Q
    ||||||||  ||||||| |||||||| ||||||||||||||||||| ||||| ||||||||| |||| ||||    
T  19443 atttttgttcataggggatcaaaatttgcaactttttgaaagttaaggggagaaaaagtgcattttaaccta 19514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 49137 - 49185
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcc 75  Q
    ||||||||||| ||||| ||||||||||| ||||||||||| |||||||    
T  49137 caaaattgcaagtttttaaaagttaagggtggaaaagtgcaatttagcc 49185  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 15703 - 15739
Alignment:
Q  19 tagggggtcaaaattgcaactttttgaaagttaaggg 55  Q
    ||||||||||||||||||||||||| |||||||||||    
T  15703 tagggggtcaaaattgcaactttttaaaagttaaggg 15739  T

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Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 454986 - 454926
Alignment:
Q  18 atagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaa 78  Q
    |||||||| ||||||  ||||||||| ||| |||| ||  |||||||||||||||||||||    
T  454986 atagggggccaaaatcacaactttttaaaacttaatgggtgaaaagtgcactttagcctaa 454926  T

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Target: scaffold0186 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 23127 - 23075
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcctaaaat 81  Q
    ||||||||||| ||||||||||||| |||  |||||||||||||||||| |||||    
T  23127 caaaattgcaagtttttgaaagttagggg--gaaaagtgcactttagccaaaaat 23075  T

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Target: scaffold0186; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 23943 - 23995
Alignment:
Q  27 caaaattgcaactttttgaaagttaagggag-gaaaagtgcactttagcctaaa 79  Q
    ||||||||||| |||||||||||| ||||||  |||||||||||||||||||||    
T  23943 caaaattgcaagtttttgaaagtt-agggagaaaaaagtgcactttagcctaaa 23995  T

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Target: scaffold0093 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 2500 - 2564
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaa-ctttttgaaagttaagggaggaaaagtgcactttagc 74  Q
    ||||||||  |||||||||||||||||||  |||||||||||||  || ||||||||||||||||||    
T  2500 tttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcactttagc 2564  T

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Target: scaffold0093; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 7123 - 7187
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaa-ctttttgaaagttaagggaggaaaagtgcactttagc 74  Q
    ||||||||  |||||||||||||||||||  |||||||||||||  || ||||||||||||||||||    
T  7123 tttttgtacttagggggtcaaaattgcaagttttttgaaagtta--gggggaaaagtgcactttagc 7187  T

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Target: scaffold0059 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 4769 - 4829
Alignment:
Q  13 tgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagc 74  Q
    ||||| ||||||| ||||||||||  ||||| ||||||| |||||| |||||||||||||||    
T  4769 tgtatttagggggccaaaattgcatgtttttaaaagtta-gggagggaaagtgcactttagc 4829  T

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Target: scaffold0690 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 4340 - 4300
Alignment:
Q  17 tatagggggtcaaaattgcaactttttgaaagttaagggag 57  Q
    ||||||||| |||||| |||||||||||||| |||||||||    
T  4340 tatagggggccaaaatcgcaactttttgaaacttaagggag 4300  T

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Target: scaffold0369 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 13257 - 13192
Alignment:
Q  9 tttttgtatatagggggtcaaaattgcaactttttgaaagttaagggaggaaaagtgcactttagcct 76  Q
    |||| ||| ||||| |||||||||  ||||||||| ||||||| |||  |||||||||||||||||||    
T  13257 ttttcgtacataggaggtcaaaatcacaactttttcaaagttagggg--gaaaagtgcactttagcct 13192  T

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