View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17833_low_50 (Length: 400)

Name: NF17833_low_50
Description: NF17833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17833_low_50
NF17833_low_50
[»] chr1 (3 HSPs)
chr1 (18-375)||(21907656-21908013)
chr1 (19-184)||(4126166-4126332)
chr1 (313-375)||(21905958-21906020)
[»] chr7 (2 HSPs)
chr7 (19-191)||(1097875-1098047)
chr7 (99-140)||(20463429-20463470)
[»] chr2 (4 HSPs)
chr2 (19-158)||(32491373-32491512)
chr2 (19-190)||(37098299-37098470)
chr2 (29-196)||(15749387-15749552)
chr2 (32-95)||(37225664-37225727)
[»] chr6 (3 HSPs)
chr6 (19-158)||(6552780-6552919)
chr6 (27-128)||(30767539-30767640)
chr6 (99-140)||(11714575-11714616)
[»] chr4 (3 HSPs)
chr4 (18-119)||(39634666-39634767)
chr4 (56-158)||(33906208-33906310)
chr4 (18-155)||(1981026-1981161)
[»] chr5 (4 HSPs)
chr5 (25-180)||(6276561-6276713)
chr5 (23-101)||(8874627-8874705)
chr5 (19-184)||(29952674-29952840)
chr5 (99-143)||(36906600-36906644)
[»] chr3 (5 HSPs)
chr3 (30-182)||(45012257-45012410)
chr3 (56-158)||(36012802-36012903)
chr3 (30-118)||(21176319-21176406)
chr3 (27-96)||(45858170-45858239)
chr3 (56-121)||(51066826-51066891)
[»] chr8 (2 HSPs)
chr8 (56-158)||(35958109-35958211)
chr8 (27-101)||(29456622-29456697)
[»] scaffold0072 (1 HSPs)
scaffold0072 (27-141)||(3121-3235)
[»] scaffold0606 (1 HSPs)
scaffold0606 (27-101)||(627-700)


Alignment Details
Target: chr1 (Bit Score: 310; Significance: 1e-174; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 18 - 375
Target Start/End: Complemental strand, 21908013 - 21907656
Alignment:
Q  18 aaaaggaccatatgagataatttaaaatactataacgcataaaacgactgatattagttgtcaattaatctaataacattgtaaacattttaattagatt 117  Q
    ||||| ||||| ||||||||||||||||||||||||  ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21908013 aaaagaaccatgtgagataatttaaaatactataacatataaaacaaatgatattagttgtcaattaatctaataacattgtaaacattttaattagatt 21907914  T
Q  118 aattgaggggaccataacctaatatacagtttatgaaacatataatacaatttaattgtagtatatagaaaaaattattgatagtgtaaggggggcctat 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21907913 aattgaggggaccataacctaatatacagtttatgaaacatataatacaatttaattgtagtatatagaaaaaattattgatagtgtaagggggacctat 21907814  T
Q  218 ctccaaaagcccccctctctctctaccactgttgtgccatgttattattttaaataaaataattgtctgtagagttttggtttttctcttcaactctcaa 317  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21907813 ctccaaaggcccccctctccctctaccactgttgtaccatgttattattttaaataaaataattgtctgtagagttttggtttctctcttcaactctcaa 21907714  T
Q  318 tctcttacatgaccttccatgatgcgtgaactatcatggtagaattaatgaaaacaat 375  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21907713 tctcttacatgacctttcatgatgcgtgaactatcatggtagaattaatgaaaacaat 21907656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 4126166 - 4126332
Alignment:
Q  19 aaaggaccatatgagataatttaaaatactataacgcataaaacgactgatattagttgtcaattaatctaataacattgtaaacattttaattagatta 118  Q
    |||||| ||||||||||||||||||||| ||||||  ||||||  | |||||||||||||||||||||||||||| || || |||||||| |||||||||    
T  4126166 aaaggatcatatgagataatttaaaataatataacatataaaattaatgatattagttgtcaattaatctaataatatggtgaacattttgattagatta 4126265  T
Q  119 attgaggggaccataacctaatatacagtttatgaaaca-tataatacaatttaattgtagtatata 184  Q
    ||||  ||||||||| ||||||||| | ||||||||| | | ||||| | |||||||||||||||||    
T  4126266 attggagggaccatagcctaatatatattttatgaaatattctaatatagtttaattgtagtatata 4126332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 21906020 - 21905958
Alignment:
Q  313 ctcaatctcttacatgaccttccatgatgcgtgaactatcatggtagaattaatgaaaacaat 375  Q
    |||| |||||||||  | ||| |||||||||||||||| ||||||||||| ||| ||||||||    
T  21906020 ctcagtctcttacacaatctttcatgatgcgtgaactagcatggtagaatcaattaaaacaat 21905958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 9e-46; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 1098047 - 1097875
Alignment:
Q  19 aaaggaccatatgagataatttaaaatactataacgcataaaacgactgatattagttgtcaattaatctaataacattgtaaacattttaattagatta 118  Q
    |||||||||||||||||||||||||||| ||||||  ||||||| | ||||||||||||||| |||||||||| |||| || ||||||||||||||||||    
T  1098047 aaaggaccatatgagataatttaaaataatataacatataaaactaatgatattagttgtcagttaatctaatgacatagtgaacattttaattagatta 1097948  T
Q  119 attgaggggaccataacctaatatacagtttatgaaaca-tataatacaatttaattgtagtatatagaaaaaa 191  Q
    |||| | |||||||| ||||||||| | ||||||||||| ||||||| | ||||||||||||||||| ||||||    
T  1097947 attg-gaggaccatagcctaatatatattttatgaaacattataatatagtttaattgtagtatataaaaaaaa 1097875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 20463429 - 20463470
Alignment:
Q  99 taaacattttaattagattaattgaggggaccataacctaat 140  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  20463429 taaatattttaattagattaattggggggaccataacctaat 20463470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 32491512 - 32491373
Alignment:
Q  19 aaaggaccatatgagataatttaaaatactataacgcataaaacgactgatattagttgtcaattaatctaataacattgt-aaacattttaattagatt 117  Q
    |||||||||||||||||||||||||||| ||||||  ||||||  | ||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  32491512 aaaggaccatatgagataatttaaaataatataacatataaaattaatgatattagttgtcaattaatctaataacatggtgaaacattttaattagatt 32491413  T
Q  118 aattgaggggaccataacctaatatacagtttatgaaacat 158  Q
    |||||  ||| ||| ||||||||||| | ||||||||||||    
T  32491412 aattggaggggccacaacctaatatata-tttatgaaacat 32491373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 190
Target Start/End: Original strand, 37098299 - 37098470
Alignment:
Q  19 aaaggaccatatgagataatttaaaatactataacgcataaaacgactgatattagttgtcaattaatctaataacattgtaaacattttaattagatta 118  Q
    |||||| |||||| || ||||||||||| ||||||  ||||||| | |||||||||||||| ||||||||||||| || || ||||||||||||||||||    
T  37098299 aaaggagcatatgcgacaatttaaaataatataacatataaaactaatgatattagttgtctattaatctaataatatggtgaacattttaattagatta 37098398  T
Q  119 attgaggggaccataacctaatatacagtttatgaaaca-tataatacaatttaattgtagtatatagaaaaa 190  Q
    |||  ||||||||||  | |||||| | ||||| ||||| | |||||  |||||||||||||||||| |||||    
T  37098399 attagggggaccatagtcaaatatatattttataaaacattctaata-tatttaattgtagtatataaaaaaa 37098470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 29 - 196
Target Start/End: Complemental strand, 15749552 - 15749387
Alignment:
Q  29 atgagataatttaaaatactataacgcataaaacgactgatattagttgtcaattaatctaataacattgtaaacattttaattagattaattgagggga 128  Q
    ||||| ||||| |||||| ||||||| | ||||  | |||||||||||||||||||||||||||||||  | | |||||||||||||||||||| |||||    
T  15749552 atgagttaattaaaaataatataacgtaaaaaattaatgatattagttgtcaattaatctaataacatgctgatcattttaattagattaattg-gggga 15749454  T
Q  129 ccataacctaatatacagtttatgaaaca-tataatacaatttaattgtagtatatagaaaaaattatt 196  Q
    ||||||||||| ||| | |||| |||| | | ||||| | ||||||||||||||||| |||||||||||    
T  15749453 ccataacctaacatatatttta-gaaatattctaatatagtttaattgtagtatata-aaaaaattatt 15749387  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 37225727 - 37225664
Alignment:
Q  32 agataatttaaaatactataacgcataaaacgactgatattagttgtcaattaatctaataaca 95  Q
    ||||||||||||||  ||| | | ||||||| | |||||||||||||||||| |||||||||||    
T  37225727 agataatttaaaattgtattaagtataaaactaatgatattagttgtcaattgatctaataaca 37225664  T

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Target: chr6 (Bit Score: 76; Significance: 5e-35; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 6552919 - 6552780
Alignment:
Q  19 aaaggaccatatgagataatttaaaatactataacgcataaaacgactgatattagttgtcaattaatctaataacattgtaaacattttaattagatta 118  Q
    |||||||||||||||||||||||||||| |||||   ||||||| | |||||||||||||||| ||||||||||  || || ||||||| ||||| ||||    
T  6552919 aaaggaccatatgagataatttaaaataatataatatataaaactaatgatattagttgtcaaataatctaatattatggtgaacatttgaattaaatta 6552820  T
Q  119 attgaggggaccataacctaatatacagtttatgaaacat 158  Q
    ||||||||| ||||||||||||||| | ||||||||||||    
T  6552819 attgagggggccataacctaatatatattttatgaaacat 6552780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 30767640 - 30767539
Alignment:
Q  27 atatgagataatttaaaatactataacgcataaaacgactgatattagttgtcaattaatctaataacattgtaaacattttaattagattaattgaggg 126  Q
    |||||| |||| ||||||||  |||||  ||||||| | || |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  30767640 atatgaaataacttaaaatatcataacatataaaactaatgctattagttgtcaattaatctaataacatagtaaatattttaattagattaattgaggg 30767541  T
Q  127 ga 128  Q
    ||    
T  30767540 ga 30767539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 11714575 - 11714616
Alignment:
Q  99 taaacattttaattagattaattgaggggaccataacctaat 140  Q
    ||||||||||||||||||||| || |||||||||| ||||||    
T  11714575 taaacattttaattagattaactgtggggaccatagcctaat 11714616  T

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Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 39634666 - 39634767
Alignment:
Q  18 aaaaggaccatatgagataatttaaaatactataacgcataaaacgactgatattagttgtcaattaatctaataacattgtaaacattttaattagatt 117  Q
    |||||||||||||||||| |||||||||| ||||||  ||||||| | | |||||||||||||||||||||||| | || ||||||||||||||||||||    
T  39634666 aaaaggaccatatgagatgatttaaaataatataacatataaaactaattatattagttgtcaattaatctaatcatatggtaaacattttaattagatt 39634765  T
Q  118 aa 119  Q
    ||    
T  39634766 aa 39634767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 56 - 158
Target Start/End: Complemental strand, 33906310 - 33906208
Alignment:
Q  56 ataaaacgactgatattagttgtcaattaatctaataacattgtaaacattttaattagattaattgaggggaccataacctaatatacagtttatgaaa 155  Q
    ||||||| | |||||||||||||||||||||||||||| ||  | |||||||||||||||||||||| | | |||||||||||| ||| | |||||||||    
T  33906310 ataaaactaatgatattagttgtcaattaatctaataatatgatgaacattttaattagattaattgggagaaccataacctaacatatattttatgaaa 33906211  T
Q  156 cat 158  Q
    |||    
T  33906210 cat 33906208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 1981026 - 1981161
Alignment:
Q  18 aaaaggaccatatgagataatttaaaatactataacgcataaaacgactgatattagttgtcaattaatctaataacattgtaaacattttaattagatt 117  Q
    |||| |||||||  ||||||||||||||| ||||||  ||||||| | | ||||| ||||| ||| |||||||||||| ||| || ||||||||||||||    
T  1981026 aaaaagaccatacaagataatttaaaataatataacatataaaactatttatatttgttgttaataaatctaataaca-tgtgaatattttaattagatt 1981124  T
Q  118 aattgaggggaccataacctaatatacagtttatgaaa 155  Q
    |||| ||||||||||| ||||||||| | |||||||||    
T  1981125 aatt-aggggaccatagcctaatatatattttatgaaa 1981161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 25 - 180
Target Start/End: Complemental strand, 6276713 - 6276561
Alignment:
Q  25 ccatatgagataatttaaaatactataacgcataaaacgactgatattagttgtcaattaatctaataacattgtaaacattttaattagattaattgag 124  Q
    |||||||| |||||||||||   ||||||  | | ||| | |||||||||||||||||||||||||| |||| || |||||||||||||||||||||| |    
T  6276713 ccatatgaaataatttaaaaggatataacatacataactaatgatattagttgtcaattaatctaatgacatggtgaacattttaattagattaattggg 6276614  T
Q  125 gggaccataacctaatatacagtttatgaaaca-tataatacaatttaattgtagta 180  Q
    || ||||||||||||||||    |||||||||| | ||||  |||||||||||||||    
T  6276613 ggaaccataacctaatata----ttatgaaacattctaatttaatttaattgtagta 6276561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 8874627 - 8874705
Alignment:
Q  23 gaccatatgagataatttaaaatactataacgcataaaacgactgatattagttgtcaattaatctaataacattgtaa 101  Q
    ||||||||||||||| |||||||| ||||||  |||| || | ||||||||||||||||||||||||||||||| ||||    
T  8874627 gaccatatgagataaattaaaataatataacatataagactaatgatattagttgtcaattaatctaataacatagtaa 8874705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 184
Target Start/End: Complemental strand, 29952840 - 29952674
Alignment:
Q  19 aaaggaccatatgagataatttaaaatac--tataacgcataaaacgactgatattagttgtcaattaatctaataacattgtaaacattttaattagat 116  Q
    ||||||| || |||||||||||||||||   ||||||  || |||| | | ||| ||||||||||| |||||||||| || || ||| ||||||||| ||    
T  29952840 aaaggacaatgtgagataatttaaaataaaatataacatatcaaactaataatactagttgtcaataaatctaataatatggtgaacgttttaattaaat 29952741  T
Q  117 taattgaggggaccataacctaatatacagtttatgaaaca-tataatacaatttaattgtagtatata 184  Q
     |||||||||||| ||| ||||||||  | ||||||||| | ||||||| | ||||||| |||||||||    
T  29952740 caattgaggggactatagcctaatat--attttatgaaatattataatatagtttaattatagtatata 29952674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 36906600 - 36906644
Alignment:
Q  99 taaacattttaattagattaattgaggggaccataacctaatata 143  Q
    |||||||  ||||||||||||||| |||||||||| |||||||||    
T  36906600 taaacataataattagattaattggggggaccatagcctaatata 36906644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 7e-25; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 30 - 182
Target Start/End: Complemental strand, 45012410 - 45012257
Alignment:
Q  30 tgagataatttaaaatactataacgcataaaacgactgatattagttgtcaattaatctaataacattgtaaacattttaattagattaatt-gagggga 128  Q
    ||||||||||||||||| ||||||  ||||||| | | ||||||||||||||||||||||||||||| ||||| |||||||||||| | ||| || ||||    
T  45012410 tgagataatttaaaataatataacatataaaactaataatattagttgtcaattaatctaataacatggtaaatattttaattagagtgattggaaggga 45012311  T
Q  129 ccataacctaatatacagtttatgaaaca-tataatacaatttaattgtagtata 182  Q
    || || ||||||||| | ||||||||||| | ||||| |||||| || |||||||    
T  45012310 cc-tagcctaatatatattttatgaaacattttaatataatttagttatagtata 45012257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 158
Target Start/End: Original strand, 36012802 - 36012903
Alignment:
Q  56 ataaaacgactgatattagttgtcaattaatctaataacattgtaaacattttaattagattaattgaggggaccataacctaatatacagtttatgaaa 155  Q
    ||||||| | |||||||| |||||||||| |||| |||||| |||||||||||||||||||||||| | | ||||||  | ||||||| | |||||||||    
T  36012802 ataaaactaatgatattaattgtcaattattctagtaacatggtaaacattttaattagattaatt-aagagaccatgtcttaatatatattttatgaaa 36012900  T
Q  156 cat 158  Q
    |||    
T  36012901 cat 36012903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 21176319 - 21176406
Alignment:
Q  30 tgagataatttaaaatactataacgcataaaacgactgatattagttgtcaattaatctaataacattgtaaacattttaattagatta 118  Q
    ||||||||| ||||||| ||||| | ||||||  | |||| ||||||||||||||||||| |||||| ||||| |||||||||||||||    
T  21176319 tgagataatataaaataatataaagtataaaataa-tgatgttagttgtcaattaatctagtaacatggtaaagattttaattagatta 21176406  T

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Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 45858170 - 45858239
Alignment:
Q  27 atatgagataatttaaaatactataacgcataaaacgactgatattagttgtcaattaatctaataacat 96  Q
    |||||||||||||||||||| ||||| | ||||||  | ||||||||| || ||||||||||| ||||||    
T  45858170 atatgagataatttaaaataatataaagtataaaattaatgatattagctgccaattaatctagtaacat 45858239  T

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Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 51066891 - 51066826
Alignment:
Q  56 ataaaacgactgatattagttgtcaattaatctaataacattgtaaacattttaattagattaatt 121  Q
    ||||||| | ||||||||||||  |||||||||  |||| || |||||||||||||||||||||||    
T  51066891 ataaaactaatgatattagttgctaattaatcttgtaactttataaacattttaattagattaatt 51066826  T

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Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 56 - 158
Target Start/End: Complemental strand, 35958211 - 35958109
Alignment:
Q  56 ataaaacgactgatattagttgtcaattaatctaataacattgtaaacattttaattagattaattgaggggaccataacctaatatacagtttatgaaa 155  Q
    ||||||| | |||||||||||||||||||| ||||||| ||  | |||||||||||||||||||||| | | |||||||||||| ||| | |||||||||    
T  35958211 ataaaactaatgatattagttgtcaattaacctaataatatgatgaacattttaattagattaattgggagaaccataacctaacatatattttatgaaa 35958112  T
Q  156 cat 158  Q
    |||    
T  35958111 cat 35958109  T

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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 29456697 - 29456622
Alignment:
Q  27 atatgagataatttaaaatactataacgcataaaacgactgatattagttg-tcaattaatctaataacattgtaa 101  Q
    |||||||||||||||||||| ||||| | ||||||  | ||||||||||||  ||||||||||| |||||| ||||    
T  29456697 atatgagataatttaaaataatataaagtataaaattattgatattagttgcccaattaatctagtaacatggtaa 29456622  T

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Target: scaffold0072 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 3121 - 3235
Alignment:
Q  27 atatgagataatttaaaatactataacgcataaaacgactgatattagttgtcaattaatctaataacattgtaaacattttaattagattaattgaggg 126  Q
    |||| ||||||||||||||| ||| | | ||||||| | |||||||| ||| |||||| | || |||||| |||||  |||||||||||||||||| ||     
T  3121 atataagataatttaaaataatatgaagtataaaactaatgatattaattgccaattattttagtaacatggtaaaatttttaattagattaattggggt 3220  T
Q  127 gaccataacctaata 141  Q
    ||||||  |||||||    
T  3221 gaccatggcctaata 3235  T

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Target: scaffold0606 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 627 - 700
Alignment:
Q  27 atatgagataatttaaaatactataacgcataaaacgactgatattagttgtcaattaatctaataacattgtaa 101  Q
    |||||||||||||||||||| ||| | | ||||||  | |||||||||||||||||| ||||| |||||| ||||    
T  627 atatgagataatttaaaataatatgaagtataaaattaatgatattagttgtcaatt-atctagtaacatggtaa 700  T

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